mRNA_D-mesarthrocarpus_Contig10624.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10624.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10624.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10624.1.1 vs. uniprot
Match: A0A2E8F7M1_9GAMM (AP2/ERF domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E8F7M1_9GAMM)

HSP 1 Score: 263 bits (672), Expect = 1.400e-88
Identity = 126/143 (88.11%), Postives = 136/143 (95.10%), Query Frame = 1
Query:   10 VKKLSALHHISIIESRGTNCAWVRIKYDGKSFQQSFPFKKYGGKQKAIAAAKQKRDEEGRKIYGSNWPYAKYSPRKISPLNSSGEIGVSYSEKDHSWVATWQEGKGARRKQKNAYFSINKYGDSKAKRLAVKRRRDAIAENRI 438
            +KKLSALHHISIIESRGTNCAWVRIKYDGK+FQQSFPFKKYGGK KAI AAK+KRD EGRKIY +NWPYAKYSPRKISPLNSSGEIGVSYSEKDHSWVATWQEGKG +RKQKNAYFSINK+G++KAKRLAVKRRR+A+  NRI
Sbjct:    1 MKKLSALHHISIIESRGTNCAWVRIKYDGKNFQQSFPFKKYGGKNKAITAAKKKRDVEGRKIYSANWPYAKYSPRKISPLNSSGEIGVSYSEKDHSWVATWQEGKGVKRKQKNAYFSINKFGENKAKRLAVKRRREAVKSNRI 143          
BLAST of mRNA_D-mesarthrocarpus_Contig10624.1.1 vs. uniprot
Match: A0A2E9JG59_9GAMM (AP2/ERF domain-containing protein n=3 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E9JG59_9GAMM)

HSP 1 Score: 259 bits (662), Expect = 4.680e-87
Identity = 125/143 (87.41%), Postives = 135/143 (94.41%), Query Frame = 1
Query:   10 VKKLSALHHISIIESRGTNCAWVRIKYDGKSFQQSFPFKKYGGKQKAIAAAKQKRDEEGRKIYGSNWPYAKYSPRKISPLNSSGEIGVSYSEKDHSWVATWQEGKGARRKQKNAYFSINKYGDSKAKRLAVKRRRDAIAENRI 438
            +K+LSALHHISIIESRGTNCAWVRIKYDGKSFQ+SFPFKK+GGK KAIAAAK+KRD EG+KIYG+NWPYAK+SPRKISPLNSSGEIGVSYSEKDHSWVATWQEGKG RRKQKNAYFSINKYGD KAK+LAVK RR A+  NRI
Sbjct:    1 MKRLSALHHISIIESRGTNCAWVRIKYDGKSFQKSFPFKKFGGKNKAIAAAKKKRDIEGKKIYGANWPYAKFSPRKISPLNSSGEIGVSYSEKDHSWVATWQEGKGVRRKQKNAYFSINKYGDDKAKQLAVKARRGAVRANRI 143          
BLAST of mRNA_D-mesarthrocarpus_Contig10624.1.1 vs. uniprot
Match: A0A7C7TMZ8_9GAMM (AP2 domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C7TMZ8_9GAMM)

HSP 1 Score: 259 bits (662), Expect = 2.150e-86
Identity = 124/146 (84.93%), Postives = 137/146 (93.84%), Query Frame = 1
Query:    1 EVLVKKLSALHHISIIESRGTNCAWVRIKYDGKSFQQSFPFKKYGGKQKAIAAAKQKRDEEGRKIYGSNWPYAKYSPRKISPLNSSGEIGVSYSEKDHSWVATWQEGKGARRKQKNAYFSINKYGDSKAKRLAVKRRRDAIAENRI 438
            EVL+KKLSALHHISIIESRGTNCAWVRIKY+ KSFQQSFPFKK+GGK KAIAAAK+KRD EG+KIYG NWPYAK+SPRKISPLNSSGEIGVSYSEKDHSWVATWQEGKG RRKQKN+YFSINKYG++KA ++AVK RRDA+  N+I
Sbjct:   43 EVLLKKLSALHHISIIESRGTNCAWVRIKYNNKSFQQSFPFKKFGGKNKAIAAAKKKRDAEGKKIYGKNWPYAKFSPRKISPLNSSGEIGVSYSEKDHSWVATWQEGKGVRRKQKNSYFSINKYGEAKAMKMAVKARRDAVKANQI 188          
BLAST of mRNA_D-mesarthrocarpus_Contig10624.1.1 vs. uniprot
Match: A0A2E8XG03_9GAMM (AP2/ERF domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E8XG03_9GAMM)

HSP 1 Score: 252 bits (643), Expect = 3.690e-84
Identity = 121/143 (84.62%), Postives = 133/143 (93.01%), Query Frame = 1
Query:   10 VKKLSALHHISIIESRGTNCAWVRIKYDGKSFQQSFPFKKYGGKQKAIAAAKQKRDEEGRKIYGSNWPYAKYSPRKISPLNSSGEIGVSYSEKDHSWVATWQEGKGARRKQKNAYFSINKYGDSKAKRLAVKRRRDAIAENRI 438
            +KKLS+LHHISII+SRGTNCAWVRIKYDGKSFQQSFPFKKYGGK+KAI AAK+KRD EG+KIYGS+WPYAKYSPRKISPLNSSGEIGVSYS KDHSWVATWQEG+G RRKQKNAYFSINKYG+ KAK+LAV+ R  A+  NRI
Sbjct:    1 MKKLSSLHHISIIQSRGTNCAWVRIKYDGKSFQQSFPFKKYGGKKKAIDAAKKKRDREGKKIYGSSWPYAKYSPRKISPLNSSGEIGVSYSAKDHSWVATWQEGRGTRRKQKNAYFSINKYGEGKAKQLAVRARLRAVKANRI 143          
BLAST of mRNA_D-mesarthrocarpus_Contig10624.1.1 vs. uniprot
Match: A0A2A5AG88_9GAMM (AP2/ERF domain-containing protein n=1 Tax=SAR86 cluster bacterium TaxID=2030880 RepID=A0A2A5AG88_9GAMM)

HSP 1 Score: 251 bits (642), Expect = 6.410e-84
Identity = 121/146 (82.88%), Postives = 134/146 (91.78%), Query Frame = 1
Query:    1 EVLVKKLSALHHISIIESRGTNCAWVRIKYDGKSFQQSFPFKKYGGKQKAIAAAKQKRDEEGRKIYGSNWPYAKYSPRKISPLNSSGEIGVSYSEKDHSWVATWQEGKGARRKQKNAYFSINKYGDSKAKRLAVKRRRDAIAENRI 438
            EV +K+LSALHHISIIESRGTNCAWVRIKYDGK FQQSFPFKKYGGK KAIA+AK+KRD EG+KIYGSNWPYAK+SPRK+SPLNSSGEIGVS+S+KD+SWVATWQEGKG +RKQKNAYFSINKYG  KAK LAVK RR A+  N+I
Sbjct:    4 EVTLKRLSALHHISIIESRGTNCAWVRIKYDGKGFQQSFPFKKYGGKAKAIASAKRKRDIEGKKIYGSNWPYAKFSPRKVSPLNSSGEIGVSFSKKDNSWVATWQEGKGVKRKQKNAYFSINKYGKDKAKTLAVKARRGAVRANKI 149          
BLAST of mRNA_D-mesarthrocarpus_Contig10624.1.1 vs. uniprot
Match: A0A2E3UN22_9GAMM (AP2/ERF domain-containing protein n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E3UN22_9GAMM)

HSP 1 Score: 251 bits (640), Expect = 1.060e-83
Identity = 122/143 (85.31%), Postives = 130/143 (90.91%), Query Frame = 1
Query:   10 VKKLSALHHISIIESRGTNCAWVRIKYDGKSFQQSFPFKKYGGKQKAIAAAKQKRDEEGRKIYGSNWPYAKYSPRKISPLNSSGEIGVSYSEKDHSWVATWQEGKGARRKQKNAYFSINKYGDSKAKRLAVKRRRDAIAENRI 438
            +KK SALHHISIIESRGTNCAWVRIKYDGKSFQ+SFPF+KYGGKQKAI AAK+KRD EGRKIYG+NWPYAK+SPRKISPLNSSGEIGVSYSEKD SWVATWQEGKGARRKQKNAYFSINKYG  KAK  A+  RR A+  NRI
Sbjct:    1 MKKPSALHHISIIESRGTNCAWVRIKYDGKSFQRSFPFRKYGGKQKAITAAKKKRDIEGRKIYGANWPYAKFSPRKISPLNSSGEIGVSYSEKDQSWVATWQEGKGARRKQKNAYFSINKYGKKKAKEFAINARRRAVRANRI 143          
BLAST of mRNA_D-mesarthrocarpus_Contig10624.1.1 vs. uniprot
Match: A0A381QWE4_9ZZZZ (AP2/ERF domain-containing protein n=4 Tax=root TaxID=1 RepID=A0A381QWE4_9ZZZZ)

HSP 1 Score: 250 bits (639), Expect = 1.500e-83
Identity = 121/143 (84.62%), Postives = 130/143 (90.91%), Query Frame = 1
Query:   10 VKKLSALHHISIIESRGTNCAWVRIKYDGKSFQQSFPFKKYGGKQKAIAAAKQKRDEEGRKIYGSNWPYAKYSPRKISPLNSSGEIGVSYSEKDHSWVATWQEGKGARRKQKNAYFSINKYGDSKAKRLAVKRRRDAIAENRI 438
            +KK SALHHISIIESRGTNCAW+RIKY+GK+FQQSFPFKKYGGKQKAI AAK+KRD EGRKIYG NWPYAK+SPRKISPLNSSGEIGVSYSEKDHSWVATWQEGKG RRKQKNAYFSINKYG+  AK LA K RR A+  NR+
Sbjct:    1 MKKPSALHHISIIESRGTNCAWIRIKYNGKNFQQSFPFKKYGGKQKAITAAKKKRDIEGRKIYGVNWPYAKFSPRKISPLNSSGEIGVSYSEKDHSWVATWQEGKGIRRKQKNAYFSINKYGNKDAKELATKARRRAVKANRV 143          
BLAST of mRNA_D-mesarthrocarpus_Contig10624.1.1 vs. uniprot
Match: A0A356S480_9GAMM (AP2/ERF domain-containing protein n=7 Tax=unclassified Gammaproteobacteria TaxID=33811 RepID=A0A356S480_9GAMM)

HSP 1 Score: 246 bits (629), Expect = 5.020e-82
Identity = 116/143 (81.12%), Postives = 133/143 (93.01%), Query Frame = 1
Query:   10 VKKLSALHHISIIESRGTNCAWVRIKYDGKSFQQSFPFKKYGGKQKAIAAAKQKRDEEGRKIYGSNWPYAKYSPRKISPLNSSGEIGVSYSEKDHSWVATWQEGKGARRKQKNAYFSINKYGDSKAKRLAVKRRRDAIAENRI 438
            ++KLSALHHISIIESRGTNCAWVRI+Y GK+FQ+SFPFKKYGG++KAI AAK+KRDE+GRKIYG NWPYAK+SPRKISPLNSSG+IGVSY EKDHSWVATWQEGKG RRKQ+NAYF INKYGD++AK L+VK RR+A+  NRI
Sbjct:    1 MQKLSALHHISIIESRGTNCAWVRIRYAGKNFQESFPFKKYGGRKKAIDAAKKKRDEQGRKIYGDNWPYAKFSPRKISPLNSSGKIGVSYPEKDHSWVATWQEGKGVRRKQRNAYFLINKYGDAQAKHLSVKTRREAVKANRI 143          
BLAST of mRNA_D-mesarthrocarpus_Contig10624.1.1 vs. uniprot
Match: A0A2E1ZK54_9GAMM (AP2/ERF domain-containing protein n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2E1ZK54_9GAMM)

HSP 1 Score: 246 bits (629), Expect = 6.150e-82
Identity = 120/146 (82.19%), Postives = 131/146 (89.73%), Query Frame = 1
Query:    1 EVLVKKLSALHHISIIESRGTNCAWVRIKYDGKSFQQSFPFKKYGGKQKAIAAAKQKRDEEGRKIYGSNWPYAKYSPRKISPLNSSGEIGVSYSEKDHSWVATWQEGKGARRKQKNAYFSINKYGDSKAKRLAVKRRRDAIAENRI 438
            E L+KKLSALHHISIIESRGTNCAWVRIKYDGKSFQQSFPFKKYGGK+KAI AAK+KRD +G+KIYGSNWPYAKYSPRKISPLN SG  GVS SEKD SWVATWQEGKG RRKQKN+YFS+NK+G  KAK+LA+K R+ AI  NRI
Sbjct:    4 EDLLKKLSALHHISIIESRGTNCAWVRIKYDGKSFQQSFPFKKYGGKKKAIDAAKKKRDTQGKKIYGSNWPYAKYSPRKISPLNXSGXXGVSXSEKDQSWVATWQEGKGXRRKQKNSYFSVNKFGXRKAKQLAIKARKSAIRANRI 149          
BLAST of mRNA_D-mesarthrocarpus_Contig10624.1.1 vs. uniprot
Match: A0A2E7DPB2_9GAMM (AP2/ERF domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E7DPB2_9GAMM)

HSP 1 Score: 243 bits (620), Expect = 1.260e-80
Identity = 118/145 (81.38%), Postives = 128/145 (88.28%), Query Frame = 1
Query:    4 VLVKKLSALHHISIIESRGTNCAWVRIKYDGKSFQQSFPFKKYGGKQKAIAAAKQKRDEEGRKIYGSNWPYAKYSPRKISPLNSSGEIGVSYSEKDHSWVATWQEGKGARRKQKNAYFSINKYGDSKAKRLAVKRRRDAIAENRI 438
            +L+KKLS LHHISIIESRGTNCAWVRIKYDGKSFQQSF FKKYGGK+ AI AAK+KRD+EGRKIYG+NWPYAKYSPRKISPLN+SGEIGVSYS+KD SWVATWQEGKG RR QKNAYFSINKYG  KAK+LAVK        NR+
Sbjct:    1 MLLKKLSPLHHISIIESRGTNCAWVRIKYDGKSFQQSFSFKKYGGKRNAIKAAKRKRDQEGRKIYGTNWPYAKYSPRKISPLNNSGEIGVSYSKKDQSWVATWQEGKGLRRNQKNAYFSINKYGQDKAKKLAVKAXXXXXXXNRV 145          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10624.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E8F7M1_9GAMM1.400e-8888.11AP2/ERF domain-containing protein n=1 Tax=Gammapro... [more]
A0A2E9JG59_9GAMM4.680e-8787.41AP2/ERF domain-containing protein n=3 Tax=Gammapro... [more]
A0A7C7TMZ8_9GAMM2.150e-8684.93AP2 domain-containing protein n=1 Tax=Gammaproteob... [more]
A0A2E8XG03_9GAMM3.690e-8484.62AP2/ERF domain-containing protein n=1 Tax=Gammapro... [more]
A0A2A5AG88_9GAMM6.410e-8482.88AP2/ERF domain-containing protein n=1 Tax=SAR86 cl... [more]
A0A2E3UN22_9GAMM1.060e-8385.31AP2/ERF domain-containing protein n=2 Tax=Gammapro... [more]
A0A381QWE4_9ZZZZ1.500e-8384.62AP2/ERF domain-containing protein n=4 Tax=root Tax... [more]
A0A356S480_9GAMM5.020e-8281.12AP2/ERF domain-containing protein n=7 Tax=unclassi... [more]
A0A2E1ZK54_9GAMM6.150e-8282.19AP2/ERF domain-containing protein n=2 Tax=Gammapro... [more]
A0A2E7DPB2_9GAMM1.260e-8081.38AP2/ERF domain-containing protein n=1 Tax=Gammapro... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10624contigD-mesarthrocarpus_Contig10624:344..787 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog583355.Caka_2957
PFAMsAP2
Model size444
Max annot lvl2|Bacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.99e-08
EggNOG OGsCOG0295@1|root,COG0295@2|Bacteria
Descriptioncytidine deaminase activity
Cds size444
COG categoryF
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789198.0624156-CDS-D-mesarthrocarpus_Contig10624:343..7871680789198.0624156-CDS-D-mesarthrocarpus_Contig10624:343..787Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10624 344..787 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10624.1.1prot_D-mesarthrocarpus_Contig10624.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10624 344..787 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10624.1.1

>prot_D-mesarthrocarpus_Contig10624.1.1 ID=prot_D-mesarthrocarpus_Contig10624.1.1|Name=mRNA_D-mesarthrocarpus_Contig10624.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=148bp
EVLVKKLSALHHISIIESRGTNCAWVRIKYDGKSFQQSFPFKKYGGKQKA
IAAAKQKRDEEGRKIYGSNWPYAKYSPRKISPLNSSGEIGVSYSEKDHSW
VATWQEGKGARRKQKNAYFSINKYGDSKAKRLAVKRRRDAIAENRIA*
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mRNA from alignment at D-mesarthrocarpus_Contig10624:344..787-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10624.1.1 ID=mRNA_D-mesarthrocarpus_Contig10624.1.1|Name=mRNA_D-mesarthrocarpus_Contig10624.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=444bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10624:344..787- (Discosporangium mesarthrocarpum MT17_79)
GAGGTTCTCGTGAAAAAACTCAGCGCCCTGCATCACATCAGCATTATTGA ATCCCGTGGTACCAATTGCGCCTGGGTGCGTATCAAGTACGACGGCAAGA GCTTCCAACAGTCGTTCCCCTTCAAAAAGTATGGCGGCAAGCAAAAAGCC ATAGCTGCCGCGAAACAGAAACGCGACGAAGAAGGCCGGAAGATCTACGG TAGCAACTGGCCATACGCCAAATACAGTCCACGCAAAATATCACCGCTCA ACTCGTCCGGTGAGATTGGTGTCAGTTACTCGGAAAAAGACCACTCCTGG GTGGCCACCTGGCAGGAAGGCAAAGGGGCGAGGCGCAAGCAGAAGAACGC CTACTTCTCTATTAACAAGTACGGCGACAGCAAGGCCAAGCGCCTGGCCG TCAAACGCCGGCGCGATGCTATAGCCGAAAACCGCATCGCCTGA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10624:344..787-

>mRNA_D-mesarthrocarpus_Contig10624.1.1 ID=mRNA_D-mesarthrocarpus_Contig10624.1.1|Name=mRNA_D-mesarthrocarpus_Contig10624.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=444bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10624:344..787- (Discosporangium mesarthrocarpum MT17_79)
GAGGTTCTCGTGAAAAAACTCAGCGCCCTGCATCACATCAGCATTATTGA
ATCCCGTGGTACCAATTGCGCCTGGGTGCGTATCAAGTACGACGGCAAGA
GCTTCCAACAGTCGTTCCCCTTCAAAAAGTATGGCGGCAAGCAAAAAGCC
ATAGCTGCCGCGAAACAGAAACGCGACGAAGAAGGCCGGAAGATCTACGG
TAGCAACTGGCCATACGCCAAATACAGTCCACGCAAAATATCACCGCTCA
ACTCGTCCGGTGAGATTGGTGTCAGTTACTCGGAAAAAGACCACTCCTGG
GTGGCCACCTGGCAGGAAGGCAAAGGGGCGAGGCGCAAGCAGAAGAACGC
CTACTTCTCTATTAACAAGTACGGCGACAGCAAGGCCAAGCGCCTGGCCG
TCAAACGCCGGCGCGATGCTATAGCCGAAAACCGCATCGCCTGA
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