mRNA_D-mesarthrocarpus_Contig10620.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10620.1.1 vs. uniprot
Match: D7G1V9_ECTSI (Dynein light chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1V9_ECTSI) HSP 1 Score: 154 bits (389), Expect = 3.860e-47 Identity = 68/84 (80.95%), Postives = 74/84 (88.10%), Query Frame = 1
Query: 1 MGEEVPDWTMMWGAKVKMPIDMKDDMLRDSINTCRDVLDKCSDFEAEGLAAAESIKKHFDEKWNSNWHVIIGRNFGSFVTHETT 252
MGE VPDW MWGAKVKMP DM+DDMLRD+I TCRD LD C+DFEAEGLAAAE IKKHFD +W+ +WHVIIGRNFGSFVTHETT
Sbjct: 1 MGEMVPDWAQMWGAKVKMPTDMRDDMLRDAIETCRDALDHCADFEAEGLAAAEKIKKHFDARWDPSWHVIIGRNFGSFVTHETT 84
BLAST of mRNA_D-mesarthrocarpus_Contig10620.1.1 vs. uniprot
Match: A0A836CJA1_9STRA (Dynein light chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJA1_9STRA) HSP 1 Score: 135 bits (340), Expect = 1.140e-39 Identity = 57/77 (74.03%), Postives = 70/77 (90.91%), Query Frame = 1
Query: 19 DWTMMWGAKVKMPIDMKDDMLRDSINTCRDVLDKCSDFEAEGLAAAESIKKHFDEKWNSNWHVIIGRNFGSFVTHET 249
DW MMWGAKVK+P+DM DD+L+D+I+T R+VLDKC DFEAEGLA+AE IK+H DE+W+ +WHV+IGRNFGSFVTHET
Sbjct: 7 DWRMMWGAKVKLPLDMPDDILKDAIDTSREVLDKCHDFEAEGLASAEKIKRHLDEQWDPHWHVVIGRNFGSFVTHET 83
BLAST of mRNA_D-mesarthrocarpus_Contig10620.1.1 vs. uniprot
Match: A0A7S2W886_9STRA (Dynein light chain n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W886_9STRA) HSP 1 Score: 125 bits (314), Expect = 1.050e-35 Identity = 54/83 (65.06%), Postives = 68/83 (81.93%), Query Frame = 1
Query: 1 MGEEVPDWTMMWGAKVKMPIDMKDDMLRDSINTCRDVLDKCSDFEAEGLAAAESIKKHFDEKWNSNWHVIIGRNFGSFVTHET 249
MGEEVP+W MMWGAKVK P+D+ DDML+D+I T + ++ + +DFEAEG+ AE IK+ FDE+W WHVIIG+NFGSFVTHET
Sbjct: 1 MGEEVPEWQMMWGAKVKTPVDVPDDMLKDAILTSQRLIGEATDFEAEGVDVAEKIKREFDERWTPYWHVIIGKNFGSFVTHET 83
BLAST of mRNA_D-mesarthrocarpus_Contig10620.1.1 vs. uniprot
Match: A0A7R9U0Z2_9STRA (Dynein light chain (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U0Z2_9STRA) HSP 1 Score: 119 bits (297), Expect = 4.460e-33 Identity = 49/80 (61.25%), Postives = 63/80 (78.75%), Query Frame = 1
Query: 1 MGEEVPDWTMMWGAKVKMPIDMKDDMLRDSINTCRDVLDKCSDFEAEGLAAAESIKKHFDEKWNSNWHVIIGRNFGSFVT 240
M EE+ DW+ MWGA+V+ P DM DDML+D+I T R +LD+C DF+A+GL AAE IK FD+KW NWHV++GR FGS+VT
Sbjct: 26 MSEEIQDWSTMWGARVRQPCDMTDDMLKDAIETTRSILDECPDFDADGLKAAEMIKYSFDKKWTPNWHVVVGRGFGSYVT 105
BLAST of mRNA_D-mesarthrocarpus_Contig10620.1.1 vs. uniprot
Match: A0A7S1TPD3_9STRA (Dynein light chain n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TPD3_9STRA) HSP 1 Score: 117 bits (292), Expect = 2.430e-32 Identity = 51/84 (60.71%), Postives = 66/84 (78.57%), Query Frame = 1
Query: 1 MGE-EVPDWTMMWGAKVKMPIDMKDDMLRDSINTCRDVLDKCSDFEAEGLAAAESIKKHFDEKWNSNWHVIIGRNFGSFVTHET 249
MG+ E+ +W+ MWGA+VK+P DM DDML+D++ T R V ++ DFE +GL AAE+IK FDEKW NWHV++GR FGSFVTHET
Sbjct: 1 MGDGEIQEWSTMWGARVKVPCDMGDDMLKDAVETTRSVFEEFPDFENDGLKAAEAIKLAFDEKWTPNWHVVVGRGFGSFVTHET 84
BLAST of mRNA_D-mesarthrocarpus_Contig10620.1.1 vs. uniprot
Match: A0A7S1CI82_9STRA (Dynein light chain n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CI82_9STRA) HSP 1 Score: 103 bits (258), Expect = 3.650e-27 Identity = 46/83 (55.42%), Postives = 57/83 (68.67%), Query Frame = 1
Query: 1 MGEEVP-DWTMMWGAKVKMPIDMKDDMLRDSINTCRDVLDKCSDFEAEGLAAAESIKKHFDEKWNSNWHVIIGRNFGSFVTHE 246
MGE P +W MWGAKVK P D+ DDML D+I R L+ D+E+EG A + +KK FDEKW +WH ++G NFGSFVTHE
Sbjct: 1 MGESAPVEWKHMWGAKVKWPSDLPDDMLEDAITVTRAALEGIEDWESEGDAVVDKLKKTFDEKWGPHWHAVVGTNFGSFVTHE 83
BLAST of mRNA_D-mesarthrocarpus_Contig10620.1.1 vs. uniprot
Match: A0A7S2WLS4_9STRA (Dynein light chain n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WLS4_9STRA) HSP 1 Score: 101 bits (252), Expect = 3.080e-26 Identity = 44/83 (53.01%), Postives = 59/83 (71.08%), Query Frame = 1
Query: 1 MGEEVPDWTMMWGAKVKMPIDMKDDMLRDSINTCRDVLDKCSDFEAEGLAAAESIKKHFDEKWNSNWHVIIGRNFGSFVTHET 249
MGEEV +W +WGAKVK P++M DD+L+D+I T + L C +FE+ G A ++IK H D KW+ +W IGRNFGS V+HET
Sbjct: 3 MGEEVREWQTIWGAKVKTPVEMPDDILKDAITTVTNELAACENFESNGNLAVQNIKDHMDHKWSPHWCCFIGRNFGSKVSHET 85
BLAST of mRNA_D-mesarthrocarpus_Contig10620.1.1 vs. uniprot
Match: H3GHN7_PHYRM (Dynein light chain n=21 Tax=Oomycota TaxID=4762 RepID=H3GHN7_PHYRM) HSP 1 Score: 95.5 bits (236), Expect = 8.120e-24 Identity = 46/82 (56.10%), Postives = 53/82 (64.63%), Query Frame = 1
Query: 10 EVPDWTMMWGAKVKMPIDMKDDMLRDSINTCRDVLDK--CSDFEAEGLAAAESIKKHFDEKWNSNWHVIIGRNFGSFVTHET 249
E P W MWGAKVKMP DM+DD+L D+I L K ++E GLA E IK H DE W+ +W V IGRNFGSFVTH T
Sbjct: 3 EAPSWQHMWGAKVKMPCDMEDDVLEDAIKHVTSRLTKYDTEEWEKNGLAVCEEIKAHLDEAWDPHWVVCIGRNFGSFVTHVT 84
BLAST of mRNA_D-mesarthrocarpus_Contig10620.1.1 vs. uniprot
Match: A0A2D4BQP4_PYTIN (Dynein light chain n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BQP4_PYTIN) HSP 1 Score: 95.1 bits (235), Expect = 1.150e-23 Identity = 45/82 (54.88%), Postives = 53/82 (64.63%), Query Frame = 1
Query: 10 EVPDWTMMWGAKVKMPIDMKDDMLRDSINTCRDVLDK--CSDFEAEGLAAAESIKKHFDEKWNSNWHVIIGRNFGSFVTHET 249
E P W MWGAKVKMP DM+DD+L D+I L K ++E +GL+ E IK H DE W +W V IGRNFGSFVTH T
Sbjct: 3 EAPSWQHMWGAKVKMPCDMEDDVLEDTIKIVTSRLTKYDTEEWETKGLSVCEEIKAHLDETWEPHWVVCIGRNFGSFVTHVT 84
BLAST of mRNA_D-mesarthrocarpus_Contig10620.1.1 vs. uniprot
Match: A0A5D6XID8_9STRA (Dynein light chain n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XID8_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 9.420e-23 Identity = 44/82 (53.66%), Postives = 53/82 (64.63%), Query Frame = 1
Query: 10 EVPDWTMMWGAKVKMPIDMKDDMLRDSINTCRDVLDK--CSDFEAEGLAAAESIKKHFDEKWNSNWHVIIGRNFGSFVTHET 249
E P+W MWGAKVKMP DM+DD+L D+I L K ++E +GL E IK H DE W +W V IGRNFGS+VTH T
Sbjct: 3 EAPNWQHMWGAKVKMPCDMEDDVLEDAIKHVTSRLAKYDTEEWEKQGLTVCEEIKAHMDELWEPHWVVCIGRNFGSYVTHVT 84 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10620.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10620.1.1 >prot_D-mesarthrocarpus_Contig10620.1.1 ID=prot_D-mesarthrocarpus_Contig10620.1.1|Name=mRNA_D-mesarthrocarpus_Contig10620.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=85bp MGEEVPDWTMMWGAKVKMPIDMKDDMLRDSINTCRDVLDKCSDFEAEGLAback to top mRNA from alignment at D-mesarthrocarpus_Contig10620:246..1060- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10620.1.1 ID=mRNA_D-mesarthrocarpus_Contig10620.1.1|Name=mRNA_D-mesarthrocarpus_Contig10620.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=815bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10620:246..1060- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10620:246..1060- >mRNA_D-mesarthrocarpus_Contig10620.1.1 ID=mRNA_D-mesarthrocarpus_Contig10620.1.1|Name=mRNA_D-mesarthrocarpus_Contig10620.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=255bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10620:246..1060- (Discosporangium mesarthrocarpum MT17_79)back to top |