mRNA_D-mesarthrocarpus_Contig10614.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10614.1.1 vs. uniprot
Match: D7FVP2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVP2_ECTSI) HSP 1 Score: 145 bits (365), Expect = 1.370e-38 Identity = 71/102 (69.61%), Postives = 91/102 (89.22%), Query Frame = 2
Query: 281 DIDLNKAIANARSNLAEGKSPGAGLDNAFDQADAAYADLLVTSMDDQGLELDEEEVEELAQAGMMDQESTKKRSKGILGDVMDVFDALGGGAHIVRREDGSL 586
DIDL+ A+ANAR+NLA G SPGAGL++AFDQADAA+ADL+VTS+DDQG+ LD+EEV+ELAQ+GMMDQ+ST K+SKG+ D+ DV AL GGAHIV+R+DG++
Sbjct: 79 DIDLSSAMANARANLAAGTSPGAGLESAFDQADAAFADLIVTSVDDQGVTLDDEEVQELAQSGMMDQDSTSKKSKGLFSDMKDVLGALSGGAHIVKRDDGTV 180
BLAST of mRNA_D-mesarthrocarpus_Contig10614.1.1 vs. uniprot
Match: A0A835ZCH3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCH3_9STRA) HSP 1 Score: 122 bits (306), Expect = 8.230e-31 Identity = 63/103 (61.17%), Postives = 82/103 (79.61%), Query Frame = 2
Query: 278 GDIDLNKAIANARSNLAEGKSPGAGLDNAFDQADAAYADLLVTSMDDQGLELDEEEVEELAQAGMMDQESTKKRSKGILGDVMDVFDALGGGAHIVRREDGSL 586
GDI+L KA+ NAR NL EGKSPGAGL A +QADAAYADL++TS+D + L L +E++ EL +AGMMD +ST +RS+G GD+ DVF+AL GGAHI R++DG +
Sbjct: 7 GDIELAKALDNARRNLEEGKSPGAGLATAEEQADAAYADLILTSVDQKHLSLGDEDLAELTKAGMMDSKSTSRRSRGWAGDIADVFNALKGGAHIQRQKDGRI 109
BLAST of mRNA_D-mesarthrocarpus_Contig10614.1.1 vs. uniprot
Match: C1DZJ8_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1DZJ8_MICCC) HSP 1 Score: 94.7 bits (234), Expect = 6.190e-20 Identity = 51/100 (51.00%), Postives = 73/100 (73.00%), Query Frame = 2
Query: 287 DLNKAIANARSNLAEGKSPGAGLDNAFDQADAAYADLLVTSMDDQGLELDEEEVEELAQAGMMDQESTKKRSKGILGDVMDVFDALGGGAHIVRREDGSL 586
D++KA+ NAR+ G SPGAGL +A QA+AA+AD++ T++D G LD EE+ +L++ G MD+ES K+S GILGDV D+F AL GAHIV+++ G +
Sbjct: 45 DISKAMENARACEKSGLSPGAGLADADAQAEAAFADMINTTVDVTGEALDSEELSQLSRGGKMDEESKSKKSGGILGDVRDLFGALSKGAHIVKQKGGRV 144
BLAST of mRNA_D-mesarthrocarpus_Contig10614.1.1 vs. uniprot
Match: A0A7S0T7R1_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T7R1_9RHOD) HSP 1 Score: 94.0 bits (232), Expect = 5.400e-19 Identity = 54/107 (50.47%), Postives = 75/107 (70.09%), Query Frame = 2
Query: 275 DGDID-LNKAIANARSNLAEGKSPGAGLDNAFDQADAAYADLLVTSMDDQGLELDEEEVEELAQAG--MMDQESTKKRSKGILGDVMDVFDALGGGAHIVRREDGSL 586
DG++ L +A+ A++N G+SPGAGL A +QA AA+ADL+ TS Q EL E+E+EE AQ G M ++ S K++SKG LGD +D+ ALG GAHIVR++DG +
Sbjct: 99 DGEVSRLKRAMEAAKANEERGESPGAGLGTAEEQAYAAFADLINTSAAQQNRELSEQELEEFAQRGGNMWEEGSKKRKSKGWLGDFVDIIGALGKGAHIVRKDDGRI 205
BLAST of mRNA_D-mesarthrocarpus_Contig10614.1.1 vs. uniprot
Match: A0A7R9XNM3_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A7R9XNM3_9CHLO) HSP 1 Score: 86.3 bits (212), Expect = 4.500e-16 Identity = 49/100 (49.00%), Postives = 70/100 (70.00%), Query Frame = 2
Query: 290 LNKAIANARSNLAEGKSPGAGLDNAFDQADAAYADLLVTSMDDQGLE-LDEEEVEELAQAGMMDQESTKKRSKGILGDVMDVFDALGGGAHIVRREDGSL 586
L A++NAR N EG SPGAGL A +QA+AA+ADL+ TS+D L E+ EL++ G MD+ S ++S G+L DV+ +F+ALG GAHIV+++DG +
Sbjct: 119 LEFAMSNARKNSLEGLSPGAGLMTAQEQAEAAFADLINTSLDGADRNALTGAEITELSEGGRMDEGSKARKSGGLLADVVGLFEALGKGAHIVKQKDGRV 218
BLAST of mRNA_D-mesarthrocarpus_Contig10614.1.1 vs. uniprot
Match: A0A5J4YNM4_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YNM4_PORPP) HSP 1 Score: 82.0 bits (201), Expect = 1.320e-15 Identity = 48/101 (47.52%), Postives = 67/101 (66.34%), Query Frame = 2
Query: 290 LNKAIANARSNLAEGKSPGAGLDNAFDQADAAYADLLVTSMDDQGLELDEEEVEELAQAG--MMDQESTKKRSKGILGDVMDVFDALGGGAHIVRREDGSL 586
L KA+A AR N G+SPGA +++ D A AAYADL+V S Q EL + E+E A G M ++ S +++SKG +GD +D+ AL GGAHIVR++DG +
Sbjct: 14 LKKAMALARENQRRGESPGANAESSEDAAYAAYADLIVQSSSQQQRELSDSELEVFAARGGQMWEEGSKQRKSKGPVGDFVDMIKALFGGAHIVRQDDGRI 114
BLAST of mRNA_D-mesarthrocarpus_Contig10614.1.1 vs. uniprot
Match: C1MJA6_MICPC (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1MJA6_MICPC) HSP 1 Score: 83.6 bits (205), Expect = 1.390e-15 Identity = 47/96 (48.96%), Postives = 67/96 (69.79%), Query Frame = 2
Query: 299 AIANARSNLAEGKSPGAGLDNAFDQADAAYADLLVTSMDDQGLELDEEEVEELAQAGMMDQESTKKRSKGILGDVMDVFDALGGGAHIVRREDGSL 586
++A AR+ A G SPGAGL +A DQA+AA+AD++ T++D G LD + LA+ G MD ST ++S G+ DV D+F ALG GAHIVR+++G +
Sbjct: 72 SMAAARACEASGMSPGAGLSSAEDQAEAAFADMINTTVDVTGEALDADARARLAEGGRMDGASTSRKSGGMWSDVRDLFGALGKGAHIVRQKNGRV 167
BLAST of mRNA_D-mesarthrocarpus_Contig10614.1.1 vs. uniprot
Match: A0A830HV35_9CHLO (Uncharacterized protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HV35_9CHLO) HSP 1 Score: 84.0 bits (206), Expect = 5.290e-15 Identity = 47/96 (48.96%), Postives = 68/96 (70.83%), Query Frame = 2
Query: 302 IANARSNLAEGKSPGAGLDNAFDQADAAYADLLVTSMDDQGLE-LDEEEVEELAQAGMMDQESTKKRSKGILGDVMDVFDALGGGAHIVRREDGSL 586
++NAR N EG SPGAGL A +QA+AA+ADL+ TS+D L E+ EL++ G MD+ S ++S G+L DV+ +F+ALG GAHIV+++DG +
Sbjct: 71 MSNARKNSLEGLSPGAGLMTAQEQAEAAFADLINTSLDGADRNALTGAEITELSEGGRMDEGSKARKSGGLLADVVGLFEALGKGAHIVKQKDGRV 166
BLAST of mRNA_D-mesarthrocarpus_Contig10614.1.1 vs. uniprot
Match: D6PJB7_9ZZZZ (Uncharacterized protein n=1 Tax=uncultured organism MedDCM-OCT-S08-C998 TaxID=743643 RepID=D6PJB7_9ZZZZ) HSP 1 Score: 77.8 bits (190), Expect = 3.630e-14 Identity = 42/103 (40.78%), Postives = 70/103 (67.96%), Query Frame = 2
Query: 290 LNKAIANARSNLAEGKSPGAGLDNAFDQADAAYADLLVTSMDDQ--GLELDEEEVEELAQAGMMDQESTKK----RSKGILGDVMDVFDALGGGAHIVRREDG 580
+ +A+A A+ N +SPGAG+++AF+ A+AAYADL++TS+D + G EL +E++ L++ G M ++ K+ + G +GD+ + AL GGAHIV+ E+G
Sbjct: 1 MEQALAQAKENRDSNQSPGAGVEDAFEAAEAAYADLILTSIDQRELGEELGDEDLAALSKGGTMWEDGAKEIRNDKKAGFMGDLFNALSALAGGAHIVKDENG 103
BLAST of mRNA_D-mesarthrocarpus_Contig10614.1.1 vs. uniprot
Match: A0A7S2FA39_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A7S2FA39_9CHLO) HSP 1 Score: 68.9 bits (167), Expect = 5.170e-10 Identity = 41/86 (47.67%), Postives = 58/86 (67.44%), Query Frame = 2
Query: 290 LNKAIANARSNLAEGKSPGAGLDNAFDQADAAYADLLVTSMDDQGLE-LDEEEVEELAQAGMMDQESTKKRSKGILGDVMDVFDAL 544
L A++NAR N EG SPGAGL A +QA+AA+ADL+ TS+D L E+ EL++ G MD+ S ++S G+L DV+ +F+AL
Sbjct: 122 LEFAMSNARKNSLEGLSPGAGLMTAEEQAEAAFADLINTSLDGADRNALTGAEITELSEGGRMDEGSKARKSGGLLADVVGLFEAL 207 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10614.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10614.1.1 >prot_D-mesarthrocarpus_Contig10614.1.1 ID=prot_D-mesarthrocarpus_Contig10614.1.1|Name=mRNA_D-mesarthrocarpus_Contig10614.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=160bp MKCILLVSLTLIGSDSFVVTPCYVSRQTARDHQHFSLNKKAQTSLGGRESback to top mRNA from alignment at D-mesarthrocarpus_Contig10614:1754..3141+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10614.1.1 ID=mRNA_D-mesarthrocarpus_Contig10614.1.1|Name=mRNA_D-mesarthrocarpus_Contig10614.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1388bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10614:1754..3141+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10614:1754..3141+ >mRNA_D-mesarthrocarpus_Contig10614.1.1 ID=mRNA_D-mesarthrocarpus_Contig10614.1.1|Name=mRNA_D-mesarthrocarpus_Contig10614.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=480bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10614:1754..3141+ (Discosporangium mesarthrocarpum MT17_79)back to top |