mRNA_D-mesarthrocarpus_Contig10606.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10606.1.1 vs. uniprot
Match: D7G2L7_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2L7_ECTSI) HSP 1 Score: 169 bits (427), Expect = 1.060e-45 Identity = 85/152 (55.92%), Postives = 99/152 (65.13%), Query Frame = 1
Query: 1 QARELSLFFPLKLKG--GCFREDIVVHLFSRITDLDNFYLVLDTLGQEGALSVANRLGWLNIFNPHFADRRYELDLRQNDHRRTCIVLADMAVNEPGPNLQNTTFSRHSDPARFALIPGWEVPSSWHALTSSEYATNVGVPDDGYLCLEYCS 450
QAR L+ FP + KG G RED+VV LF R+TD+D F VL TLG++ LS RLGWLN NPH DR +LDLR NDHRR VL++MAV EPG NLQN FSRH+D AR IPGWEVP +W GVPDDG+ +EYCS
Sbjct: 1085 QARVLAGVFPERAKGTTGNPREDLVVELFGRVTDIDKFCTVLATLGRDAQLSAGRRLGWLNALNPHDIDRPLDLDLRLNDHRRIARVLSEMAVVEPGSNLQNQRFSRHADAARHFFIPGWEVPQTWPGTQGGGGDGYGGVPDDGHFTVEYCS 1236
BLAST of mRNA_D-mesarthrocarpus_Contig10606.1.1 vs. uniprot
Match: F0YFV2_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFV2_AURAN) HSP 1 Score: 95.9 bits (237), Expect = 3.970e-20 Identity = 48/124 (38.71%), Postives = 72/124 (58.06%), Query Frame = 1
Query: 1 QARELSLFFPLKLKGGCFREDIVVHLFSRITDLDNFYLVLDTLGQEGALSVANRLGWLNIFNPHFADRRYELDLRQNDHRRTCIVLADMAVNEPGPNLQNTTFSRHSDPARFALIPGWEVPSSW 372
Q R+L FP + R ++++ +F R+ DLDNFY V+D L +E + RLG++N++NP FADR Y+L L+ D R+ IVL +A+ EPG N + F R PGW++P+ W
Sbjct: 1399 QVRDLVARFPRNAQQ--LRVEVLMAVFGRVVDLDNFYTVVDELDEEEIDELVFRLGYMNVYNPVFADRMYKLCLKVPDERQMAIVLVRLAIVEPGENWVDEKFRRKES---LQWSPGWQLPAEW 1517
BLAST of mRNA_D-mesarthrocarpus_Contig10606.1.1 vs. uniprot
Match: A0A8K1CIN9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIN9_PYTOL) HSP 1 Score: 95.5 bits (236), Expect = 5.380e-20 Identity = 57/151 (37.75%), Postives = 75/151 (49.67%), Query Frame = 1
Query: 1 QARELSLFFPLKLKGGCFREDIVVHLFSRITDLDNFYLVLDTLGQEGALSVANRLGWLNIFNPHFADRRYELDLRQNDHRRTCIVLADMAVNEPGPNLQNTTFSR-HSDPARFALIPGWEVPSSWHALTSSEYATNVGVPDDGYLCLEYCS 450
QA E+ P R + LFSR+ D+ NF+ ++D + + A LGWLNIFNP +R Y LDL D R T +L +A+NEPG N N TFS +P IPGW++P W + GV GYL +EY S
Sbjct: 1273 QAAEIVACMPTTFHA---RPETARLLFSRLIDVGNFHQIVDAMPPDDQYVCAKSLGWLNIFNPMVPERAYSLDLSIWDERETIKLLVALAINEPGENWINQTFSNVRGEPG----IPGWKLPVRWEKEDEKD---GGGVNRSGYLEMEYYS 1413
BLAST of mRNA_D-mesarthrocarpus_Contig10606.1.1 vs. uniprot
Match: A0A7S3UTM1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTM1_HETAK) HSP 1 Score: 89.4 bits (220), Expect = 1.590e-19 Identity = 45/105 (42.86%), Postives = 63/105 (60.00%), Query Frame = 1
Query: 142 ALSVANRLGWLNIFNPHFADRRYELDLRQNDHRRTCIVLADMAVNEPGPNLQNTTFSRHSDPARFALIPGWEVPSSWHALTSSEYATNV--GVPDDGYLCLEYCS 450
++S+A+RLGWLNI N DR Y+LDL DH + ++ +AV+E G NL FSR +DP IPGW++P+SW A T + GVP++G L +Y S
Sbjct: 1 SISIAHRLGWLNILNLEHFDRHYDLDLTFKDHWKLANMVTRLAVDEDGDNLPLRQFSRKADP--LVWIPGWDLPASWDADNYQAKGTTIKPGVPNEGRLICQYWS 103
BLAST of mRNA_D-mesarthrocarpus_Contig10606.1.1 vs. uniprot
Match: F0YFW1_AURAN (EF-hand domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFW1_AURAN) HSP 1 Score: 91.3 bits (225), Expect = 1.690e-18 Identity = 59/138 (42.75%), Postives = 78/138 (56.52%), Query Frame = 1
Query: 61 DIVVHLFSRITDLDNFY-LVLDTLGQ--EGALSVANRLGWLNIF---NPHFADRRYELDLRQNDHRRTCIVLADMAVNEPGPNLQNTTFSR-HS-DPARFALIPGWEVPSSWHALTSSEYATNV--GVPDDGYLCLEY 444
D+VVHLFSR D +NFY VLD + V +RLGWLN+ NP A Y++DLR DH + VL +A EPG N ++ TF R H DP IPGW++P++W + Y N+ G+P DG L L+Y
Sbjct: 1767 DLVVHLFSRCLDPENFYWAVLDPTFPIPQNRNEVIHRLGWLNVLDVRNPEIAG--YDIDLRYPDHWKVAHVLTQLAAVEPGLNFKHPTFRRLHGLDP-----IPGWDLPANWDVV---RYTGNLAKGIPTDGALTLDY 1894
BLAST of mRNA_D-mesarthrocarpus_Contig10606.1.1 vs. uniprot
Match: A0A7S1XZJ5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZJ5_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 4.620e-17 Identity = 44/108 (40.74%), Postives = 64/108 (59.26%), Query Frame = 1
Query: 55 REDIVVHLFSRITDLDNFYLVLDTLGQEGALSVANRLGWLNIFNPHFADRRYELDLRQNDHRRTCIVLADMAVNEPGPNL--QNTTFSRHSDPARFALIPGWEVPSSW 372
R ++++LFSRI DL+NF +++ TL + + +RLG LN+ NP D Y LDLR + R C +L +AV EPG N + +S H +P +PGWE+P SW
Sbjct: 651 RVQLIINLFSRIVDLENFDVIMTTLDDDEERELLHRLGGLNLKNPMKPDGFYFLDLRSREQRELCKMLVRLAVEEPGENWLGEEYQWSIHDEP-----VPGWELPLSW 753
BLAST of mRNA_D-mesarthrocarpus_Contig10606.1.1 vs. uniprot
Match: A0A7S3DDT5_9EUKA (Hypothetical protein n=2 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DDT5_9EUKA) HSP 1 Score: 82.0 bits (201), Expect = 2.140e-15 Identity = 51/133 (38.35%), Postives = 71/133 (53.38%), Query Frame = 1
Query: 55 REDIVVHLFSRITDLDNFYLVLDTLGQEGALS---VANRLGWLNIFNPHFADRRYELDLRQNDHRRTCIVLADMAVNEPGPNLQNTTFSRHSDPARFALIPGWEVPSSWHALTSSEYATNVGVPDDGYLCLEY 444
R + + LF RI DL+NFYL D + ++ A++ V +RLGWLNI+NP +AD YELDL D R I L +A+ EPG N + T++ G+E+P++W VP G L LEY
Sbjct: 239 RTETICLLFGRIIDLENFYL--DIVEKQEAMTKQAVLSRLGWLNIWNPLYADIYYELDLAIRDERLMAIALVKLAIREPGENWIDETYNGQ----------GFELPATW----------TQEVPFKGKLTLEY 349
BLAST of mRNA_D-mesarthrocarpus_Contig10606.1.1 vs. uniprot
Match: A0A6H5JVF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVF0_9PHAE) HSP 1 Score: 74.3 bits (181), Expect = 1.230e-12 Identity = 38/70 (54.29%), Postives = 46/70 (65.71%), Query Frame = 1
Query: 1 QARELSLFFPLKLKG--GCFREDIVVHLFSRITDLDNFYLVLDTLGQEGALSVANRLGWLNIFNPHFADR 204
QAR L+ FP + KG G RED+VV LF R+TD++NF VL LG++ LS RLGWLN NPH DR
Sbjct: 649 QARVLAGVFPERAKGTTGNPREDLVVELFGRVTDIENFCTVLAMLGRDAQLSAGRRLGWLNALNPHEIDR 718
BLAST of mRNA_D-mesarthrocarpus_Contig10606.1.1 vs. uniprot
Match: A0A482T4Q9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T4Q9_9ARCH) HSP 1 Score: 71.6 bits (174), Expect = 9.350e-12 Identity = 49/168 (29.17%), Postives = 76/168 (45.24%), Query Frame = 1
Query: 13 LSLFFPLKLKG----GCFREDIVVHLFSRITDLDNFYLVLDTLGQEGALSVANRLGWLNIFNPHFADRRYELDLRQNDHRRTCIVLADMAVNEPGPNLQNTTF------SRHSDPAR--------------FALIPGWEVPSSWHALTSSEYATNVGVPDDGYLCLEY 444
L F P+ L G +R ++VV +F RI DL NF L+L L E ++ R+G LN+FNP + DL + + R+ + M+V EPG N + S + + + FA IPGW++ +W ++ G+P G LC E+
Sbjct: 92 LECFAPIGLAHRSNIGSYRVELVVMVFDRILDLQNFELILMMLNAEEQAALYARIGVLNVFNPSKPEGARSFDLTRWEERQLVKMFVHMSVCEPGDNCKFLALIIYLMLSSYLETSHVFIGLNKQFIFDRGFAPIPGWDLSVTW--------LSDEGLPKKGLLCFEF 251
BLAST of mRNA_D-mesarthrocarpus_Contig10606.1.1 vs. uniprot
Match: A0A482RZW2_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RZW2_9ARCH) HSP 1 Score: 69.3 bits (168), Expect = 7.120e-11 Identity = 43/137 (31.39%), Postives = 68/137 (49.64%), Query Frame = 1
Query: 46 GCFREDIVVHLFSRITDLDNFYLVLDTLGQEGALSVANRLGWLNIFNPHFADRRYELDLRQNDHRRTCIVLADMAVNEPGPNLQNTTF--SRHSDPARFALIPGWEVPSSWHALTSSEYATNVGVPDDGYLCLEYCS 450
G FR ++++ LFSR+TDL NF VL L + RLGWLN++NP + LDL + + R+ +L + E G ++ S ++P P W++P SW+A + +P G L ++Y S
Sbjct: 810 GTFRVELIISLFSRLTDLINFEYVLQDLENVEIAMILFRLGWLNVWNPLKPEGYIVLDLSRQEERQIARMLITLNYVETGETWLEPSYAPSLTTNPED----PNWKLPISWYAEET--------LPSTGILSVQYFS 934 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10606.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10606.1.1 >prot_D-mesarthrocarpus_Contig10606.1.1 ID=prot_D-mesarthrocarpus_Contig10606.1.1|Name=mRNA_D-mesarthrocarpus_Contig10606.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=150bp QARELSLFFPLKLKGGCFREDIVVHLFSRITDLDNFYLVLDTLGQEGALSback to top mRNA from alignment at D-mesarthrocarpus_Contig10606:50..1244+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10606.1.1 ID=mRNA_D-mesarthrocarpus_Contig10606.1.1|Name=mRNA_D-mesarthrocarpus_Contig10606.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1195bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10606:50..1244+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10606:50..1244+ >mRNA_D-mesarthrocarpus_Contig10606.1.1 ID=mRNA_D-mesarthrocarpus_Contig10606.1.1|Name=mRNA_D-mesarthrocarpus_Contig10606.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=450bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10606:50..1244+ (Discosporangium mesarthrocarpum MT17_79)back to top |