mRNA_D-mesarthrocarpus_Contig1060.5.3 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1060.5.3 vs. uniprot
Match: A0A6H5JNC3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNC3_9PHAE) HSP 1 Score: 152 bits (383), Expect = 1.280e-38 Identity = 73/131 (55.73%), Postives = 97/131 (74.05%), Query Frame = 1
Query: 1 LLRQHEFLNIGLNGKVHCSLTGHDIPARVDAIQQHLGSKKLKKHKEWYSTDFSKYLPYITAHKSDPKLLFCHLTKMELNRIPSQVEAHVNGKRYKNRLREREEAKASR----GERDGSKDKE---VDFWMP 372
L++Q +FL+IGL GK+HC+LT D+P A+ QHL SKKLKK +EWY+ DFSKY P++ AHK++PKLLFC LT++ELNRIP +VEAHVNGKRY+NR E E K ++ GE +D+E +FW+P
Sbjct: 28 LIKQFDFLSIGLRGKIHCALTNRDLPLNSAAVHQHLNSKKLKKEREWYNADFSKYEPFVVAHKTNPKLLFCTLTRIELNRIPKEVEAHVNGKRYRNRKAEMEGLKQAQRQPLGEDTEEEDEEEHGAEFWVP 158
BLAST of mRNA_D-mesarthrocarpus_Contig1060.5.3 vs. uniprot
Match: D7G730_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G730_ECTSI) HSP 1 Score: 149 bits (377), Expect = 9.570e-38 Identity = 73/131 (55.73%), Postives = 95/131 (72.52%), Query Frame = 1
Query: 1 LLRQHEFLNIGLNGKVHCSLTGHDIPARVDAIQQHLGSKKLKKHKEWYSTDFSKYLPYITAHKSDPKLLFCHLTKMELNRIPSQVEAHVNGKRYKNRLREREEAKASR----GERDGSKDKEVD---FWMP 372
L++Q +FL+IGL GK+HC+LT D+P A+ QHL SKKLKK +EWY+ DFSKY P++ AHK++PKLLFC LT++ELNRIP +VEAHVNGKRY NR E E K ++ GE +D+E D W+P
Sbjct: 28 LIKQFDFLSIGLTGKIHCALTNRDLPLNSTAVHQHLNSKKLKKEREWYNADFSKYEPFVVAHKTNPKLLFCTLTRIELNRIPKEVEAHVNGKRYGNRKAEMEGLKQAQRQPLGEDSEEEDQEEDGAEIWVP 158
BLAST of mRNA_D-mesarthrocarpus_Contig1060.5.3 vs. uniprot
Match: A0A835YV33_9STRA (Surfeit locus protein 2-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV33_9STRA) HSP 1 Score: 133 bits (334), Expect = 9.080e-34 Identity = 61/106 (57.55%), Postives = 80/106 (75.47%), Query Frame = 1
Query: 1 LLRQHEFLNIGLNGKVHCSLTGHDIPARVDAIQQHLGSKKLKKHKEWYSTDFSKYLPYITAHKSDPKLLFCHLTKMELNRIPSQVEAHVNGKRYKNRLREREEAKA 318
++ QH+FL++ +GK HC++T DIPARVDA++ HL SKK K ++WYS DFSKY P+I A+K DPKLLFC LT LNRIP ++E HVNGKR+K + E E A+A
Sbjct: 40 IIDQHDFLSLNEHGKAHCNVTNLDIPARVDALKTHLASKKFIKQRDWYSYDFSKYEPHIVANKKDPKLLFCKLTMKPLNRIPEEIETHVNGKRFKRLVAEAEAAQA 145
BLAST of mRNA_D-mesarthrocarpus_Contig1060.5.3 vs. uniprot
Match: A0A7S2V5T7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5T7_9STRA) HSP 1 Score: 115 bits (288), Expect = 3.940e-26 Identity = 59/135 (43.70%), Postives = 84/135 (62.22%), Query Frame = 1
Query: 43 KVHCSLTGHDIPARVDAIQQHLGSKKLKKHKEWYSTDFSKYLPYITAHKSDPKLLFCHLTKMELNRIPSQVEAHVNGKRYKNRLREREEAKASRG-------------ERDGSKDKEVDFWMPNSLEDDLEHLEE 408
+VHCS+TGHDIP +++Q HL SKK KK KEWY D+S++ PYI HK D +LLFC LT+ LN+IP+QV+ HV GKR+ E+E+ A +G E+ +K +E FW+P ++++ L E
Sbjct: 37 RVHCSVTGHDIPPSSNSVQAHLKSKKFKKQKEWYKQDYSEFEPYIVPHKFDSRLLFCTLTRRPLNKIPNQVKKHVEGKRFIRLRAEKEKILAEKGSKKNKLAEGLPEGEKSDTKMEEDAFWVPPDSDEEVGVLNE 171
BLAST of mRNA_D-mesarthrocarpus_Contig1060.5.3 vs. uniprot
Match: D0NMC6_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NMC6_PHYIT) HSP 1 Score: 108 bits (271), Expect = 2.920e-24 Identity = 62/145 (42.76%), Postives = 89/145 (61.38%), Query Frame = 1
Query: 1 LLRQHEFLNIGLNG-------KVHCSLTGHDIPARVDAIQQHLGSKKLKKHKEWYSTDFSKYLPYITAHKSDPKLLFCHLTKMELNRIPSQVEAHVNGKRYKNRLREREEAKASRGERD----GSKDKEVDFWMPNSLEDDLEHL 402
LL QHEFL + +G +V C LT H++ RVD I+QHL SKK K ++WY D+S+Y PYI H+ PK L+C++T LNRIPS+VE H+ GKRYK R+++ + K ++ E D G+ + D + + +DDL L
Sbjct: 8 LLNQHEFLEVVESGEGDNKRVRVKCQLTQHEMLPRVDIIEQHLKSKKFVKARDWYCHDYSQYEPYIVPHRRLPKSLYCNVTGTILNRIPSEVEKHIQGKRYK-RMKQHVKIKVTKSEDDDELQGNGGFDADAFEFENSQDDLADL 151
BLAST of mRNA_D-mesarthrocarpus_Contig1060.5.3 vs. uniprot
Match: A0A7R9UEL5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEL5_9STRA) HSP 1 Score: 107 bits (267), Expect = 4.960e-24 Identity = 54/124 (43.55%), Postives = 80/124 (64.52%), Query Frame = 1
Query: 43 KVHCSLTGHDIPARVDAIQQHLGSKKLKKHKEWYSTDFSKYLPYITAHKSDPKLLFCHLTKMELNRIPSQVEAHVNGKRYKN-------RLREREEAKASRGERDGSKDKEVDFWMPNSLEDDL 393
KV CSLT H++P A+Q +L SK +K KEWYS DFSKY PY+ AHK D + LFC++T+ LNRIP +V+ H GKR++ R ++REE + R +R+ +K K +F++P ++ +
Sbjct: 41 KVVCSLTRHEMPPSAPAVQAYLRSKAFRKQKEWYSADFSKYEPYVVAHKKDGRKLFCNVTRKSLNRIPKEVQRHWEGKRFQRLKVEYDARQKKREEQEMIRRQREEAKAK-GEFYLPEDFDESM 163
BLAST of mRNA_D-mesarthrocarpus_Contig1060.5.3 vs. uniprot
Match: W2QB64_PHYPN (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2QB64_PHYPN) HSP 1 Score: 108 bits (270), Expect = 9.840e-24 Identity = 54/102 (52.94%), Postives = 69/102 (67.65%), Query Frame = 1
Query: 1 LLRQHEFLNIGLNG-------KVHCSLTGHDIPARVDAIQQHLGSKKLKKHKEWYSTDFSKYLPYITAHKSDPKLLFCHLTKMELNRIPSQVEAHVNGKRYK 285
LL+QHEFL I +G +V C LT H++ RVD I+QHL SKK K ++WY D+S+Y PYI H+ PK L+C++T LNRIPS+VE HV GKRYK
Sbjct: 13 LLKQHEFLEIVESGEGDNKRVRVKCQLTQHEMLPRVDVIEQHLKSKKFVKARDWYCHDYSQYEPYIVPHRRLPKSLYCNVTGTILNRIPSEVEKHVQGKRYK 114
BLAST of mRNA_D-mesarthrocarpus_Contig1060.5.3 vs. uniprot
Match: A0A329S2S4_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S2S4_9STRA) HSP 1 Score: 107 bits (266), Expect = 3.370e-23 Identity = 56/120 (46.67%), Postives = 79/120 (65.83%), Query Frame = 1
Query: 1 LLRQHEFLNIGLNG-------KVHCSLTGHDIPARVDAIQQHLGSKKLKKHKEWYSTDFSKYLPYITAHKSDPKLLFCHLTKMELNRIPSQVEAHVNGKRYKNRLREREEAKASRGERDG 339
LL QHEFL + +G ++ C LT H++ RVD I+Q+L SKK K ++WY D+S+Y PYI +H+ K LFC++T LNRIPS+VE HV GKRYK R+++ + K ++ E DG
Sbjct: 13 LLSQHEFLEVVESGEGDNKRMRIKCQLTQHEMLPRVDVIEQYLKSKKFVKARDWYCHDYSQYEPYIVSHRRLTKSLFCNVTGTILNRIPSEVEKHVQGKRYK-RMKQHVKIKVTKSEDDG 131
BLAST of mRNA_D-mesarthrocarpus_Contig1060.5.3 vs. uniprot
Match: A0A225W5Q5_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W5Q5_9STRA) HSP 1 Score: 105 bits (262), Expect = 6.220e-23 Identity = 52/102 (50.98%), Postives = 68/102 (66.67%), Query Frame = 1
Query: 1 LLRQHEFLNIGLNG-------KVHCSLTGHDIPARVDAIQQHLGSKKLKKHKEWYSTDFSKYLPYITAHKSDPKLLFCHLTKMELNRIPSQVEAHVNGKRYK 285
LL +HEFL + +G +V C LT H++ ARVD I+QHL SKK K ++WY D+S+Y PYI H+ K L+C++T LNRIPS+VE HV GKRYK
Sbjct: 13 LLSKHEFLEVVESGEGDNKRVRVKCQLTQHEMMARVDVIEQHLKSKKFVKVRDWYCHDYSQYEPYIVPHRKLAKSLYCNVTSTILNRIPSEVEKHVQGKRYK 114
BLAST of mRNA_D-mesarthrocarpus_Contig1060.5.3 vs. uniprot
Match: A0A067D023_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D023_SAPPC) HSP 1 Score: 105 bits (262), Expect = 1.320e-22 Identity = 48/91 (52.75%), Postives = 66/91 (72.53%), Query Frame = 1
Query: 43 KVHCSLTGHDIPARVDAIQQHLGSKKLKKHKEWYSTDFSKYLPYITAHKSDPKLLFCHLTKMELNRIPSQVEAHVNGKRYKNRLREREEAK 315
+V CS TGH++P RVD I HL SK+ KK EWYS DFS+Y PYI +H+ PK L+C++T + LN+IPS++E H+ GK++ LR +EE K
Sbjct: 35 RVKCSATGHEMPPRVDVITAHLNSKRYKKATEWYSFDFSQYEPYIVSHRRKPKCLYCNVTGLVLNKIPSEIEKHMKGKKF---LRLKEEVK 122 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1060.5.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1060.5.3 >prot_D-mesarthrocarpus_Contig1060.5.3 ID=prot_D-mesarthrocarpus_Contig1060.5.3|Name=mRNA_D-mesarthrocarpus_Contig1060.5.3|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=406bp LLRQHEFLNIGLNGKVHCSLTGHDIPARVDAIQQHLGSKKLKKHKEWYSTback to top mRNA from alignment at D-mesarthrocarpus_Contig1060:9456..11154- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig1060.5.3 ID=mRNA_D-mesarthrocarpus_Contig1060.5.3|Name=mRNA_D-mesarthrocarpus_Contig1060.5.3|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1699bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1060:9456..11154- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1060:9456..11154- >mRNA_D-mesarthrocarpus_Contig1060.5.3 ID=mRNA_D-mesarthrocarpus_Contig1060.5.3|Name=mRNA_D-mesarthrocarpus_Contig1060.5.3|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1218bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1060:9456..11154- (Discosporangium mesarthrocarpum MT17_79)back to top |