mRNA_D-mesarthrocarpus_Contig1060.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig1060.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig1060.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig1060.1.1 vs. uniprot
Match: D7G731_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G731_ECTSI)

HSP 1 Score: 279 bits (714), Expect = 9.760e-86
Identity = 197/371 (53.10%), Postives = 257/371 (69.27%), Query Frame = 1 
Query:    4 DANREKIINQDDESASTQPHLVERQLAVAERKVQNSLYISEAHEGLAAQAVARERAAEIRATEYGRRLQRALEKLEATERRDRLVHLEEACKKDADSIHAAESEIRSYHLDPDLHLPVSTAQRRGLARAEQRLCRLRKRLKSQTATLNHTRSLEKLHEDLRTAASAGDCASTSRLLASGISVNVPDKSGFSAFLYSCGQSNPELVRMMLAAGGDAQDGDGKITALHVAARNGNVGVIKELLRGGAPLSARDSVGGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILASRQQXXXXXXXXXXXGGLAGATTVAKIGATSVGTLLLEWGASPTVKNSEGLTPLAVALRARNQGVVLAYRGFFGDE 1116
            D  R + +++D+E+       ++RQL VAER+V+NS YI+EAHE LAA+A  RE+ A  RA E GRRL RALEKLE+ ER+D +++LE +C +D +    AE E+R++ +DP+L+LPV+TA+RR +AR+E+RL RLR R +SQ+A L+  ++ E+LH DLR AA  GD   T + L SGISVNVPD+SG SAFLY+CGQ+N ELV++++ AGGD  DGDG IT L +AAR G +GV++ LL  GA + ARDS GGT            XXXXXXXXXXXXXXXXXXXXXXXX+LAS              GG  GA          V  LLLEWGAS  +KNS+GLTP++ AL  RN+ +VLAYR FFG++
Sbjct:  160 DDGRHRALDKDNEARR-----IKRQLEVAERRVKNSFYINEAHESLAAKATEREKEANARAAELGRRLDRALEKLESIERKDMILNLETSCARDEEQTFFAERELRAHQMDPELYLPVNTAKRRQVARSEKRLRRLRLRHESQSAALSQAQATERLHADLRRAAGLGDIPQTMKCLDSGISVNVPDQSGLSAFLYACGQANAELVQILVDAGGDVLDGDGTITGLIIAARKGTMGVVQTLLEAGADVCARDSAGGTALHAATLHRHVDXXXXXXXXXXXXXXXXXXXXXXXXMLASVSSGKDGGSDVR--GGETGA---------DVAGLLLEWGASADIKNSKGLTPISAALDTRNRAMVLAYREFFGED 514
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BLAST of mRNA_D-mesarthrocarpus_Contig1060.1.1 vs. uniprot
Match: A0A836C9K4_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9K4_9STRA)

HSP 1 Score: 124 bits (312), Expect = 3.440e-28
Identity = 96/237 (40.51%), Postives = 131/237 (55.27%), Query Frame = 1 
Query:   40 ESASTQPHLVE---RQLAVAERKVQNSLYISEAHEGLAAQAVARERAAEIRATEYGRRLQRALEKLEATERRDRLVHLEEACKKDADSIHAAESEIRSYHLDPDLHLPVSTAQRRGLARAEQRLCRLRKRLKSQTATLNHTRSLEKLHEDLRTAASAGDCASTSRLL---------------ASGISVNVPDKSGFSAFLYSCGQSNPELVRMMLAAGGDAQDGD-GKITALHVAAR 693
            E+A + P  +E   ++L VAERK+QN+LY+ EA E LA +A            E  RRL RAL+K+ + E   +L  L        + I AAE ++R +  +PDLHLPV    RR LARAE RL RLR  L + TA L+    +   HE LR AA+ GD A+   +L               A+ I+VN+PD +GFSA  Y+CG  + + VR  L+ GGDA+D   GK+  L +AAR
Sbjct:   37 ETAESGPDTIESLRQRLEVAERKIQNALYVREAAEALAERAXXXXXXXXXXXRESDRRLARALDKIASMELAAKLATLGAQRVTVEERITAAEHDVRLHLSNPDLHLPVHACDRRALARAEARLRRLRADLAAVTAALDSATRVHAAHEALRAAATRGDAAALRAMLSDKADAHSGSNGAAAAAAINVNLPDGTGFSALHYACGSGSADAVRACLSGGGDARDDRCGKLAPLIIAAR 273
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BLAST of mRNA_D-mesarthrocarpus_Contig1060.1.1 vs. uniprot
Match: A0A7R9VLG3_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VLG3_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 3.500e-18
Identity = 70/202 (34.65%), Postives = 99/202 (49.01%), Query Frame = 1 
Query:  481 LRTAASAGDCASTSRLLASGISVNVPDKSGFSAFLYSCGQSNPELVRMMLAAGGDAQDGDGKITALHVAARNGNVGVIKELLRGGAPLSARDSVGGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILASRQQXXXXXXXXXXXGGLAGATTVAKIGATSVGTLLLEWGASPTVKNSEGLTPLAVALRARNQGVV 1086
            +R A+S GD     +L+  G+SVNVPDK+GFSAF Y+CG  + + VR+M+ +  D  D DG+ TAL  A RNG+  V++ LL  GA + +RD  G T                 XXXX                    ++            G AG    A+ G   + +LLL+ GA    KN+ G+TP+ +A   R+QGVV
Sbjct:    1 MRQASSRGDTKCIKQLMEQGVSVNVPDKAGFSAFKYACGGGHLDAVRLMVQSA-DLNDADGRTTALIAATRNGHAPVVRFLLEEGADVESRDDGGNTALLIACAGGYVDCARALXXXXKKGG----------------RRGGGADPNAANAVGNAGLHLCARDGREEIASLLLDRGAEAGAKNASGMTPMEIAKARRHQGVV 185
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BLAST of mRNA_D-mesarthrocarpus_Contig1060.1.1 vs. uniprot
Match: A0A2V8U4L6_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8U4L6_9BACT)

HSP 1 Score: 59.3 bits (142), Expect = 4.570e-6
Identity = 45/105 (42.86%), Postives = 59/105 (56.19%), Query Frame = 1 
Query:  481 LRTAASAGDCASTSRLLASGISVNVPDKSGFSAFLYSCG-----QSNPELVRMMLAAGG--DAQDGDGKITALHVAARNGNVGVIKELLRGGAPLSARDSVGGTP 774
            L  A++AG+  +   LL  G   NV D  G +  LYS G     +S   +VR ++  G   DA+DG    TALH+AAR GNV V + LL  GA + ARDS+G TP
Sbjct:  243 LHGASAAGNLNTVELLLRLGADPNVTDAGGHTP-LYSVGNECTVESGGNVVRALVQGGANVDARDGVKHCTALHMAARRGNVEVAEALLECGADIEARDSLGDTP 346
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BLAST of mRNA_D-mesarthrocarpus_Contig1060.1.1 vs. uniprot
Match: A0A402CNU9_9BACT (Globin n=1 Tax=Capsulimonas corticalis TaxID=2219043 RepID=A0A402CNU9_9BACT)

HSP 1 Score: 55.8 bits (133), Expect = 5.940e-5
Identity = 42/103 (40.78%), Postives = 59/103 (57.28%), Query Frame = 1 
Query:  481 LRTAASAGDCASTSRLLASGISVNVPDKSGFSAFLYSCGQS---NPELVRMMLAAGG--DAQDGDGKITALHVAARNGNVGVIKELLRGGAPLSARDSVGGTP 774
            L  AA+AG+    + LL  G+  +V D+ G +  L+S G     +  +VR ++  G   DA DG  + TALH+AAR GNV V K L+   A + ARDS+G TP
Sbjct:  242 LHAAAAAGNLPMVAHLLDLGVDADVQDERGHTP-LHSAGNECGGSGAVVRALVHGGASVDACDGVKRCTALHMAARRGNVEVAKALVEFAANIEARDSLGETP 343
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1060.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G731_ECTSI9.760e-8653.10Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A836C9K4_9STRA3.440e-2840.51Ankyrin repeat-containing domain protein n=1 Tax=T... [more]
A0A7R9VLG3_9STRA3.500e-1834.65Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A2V8U4L6_9BACT4.570e-642.86Uncharacterized protein n=1 Tax=Acidobacteria bact... [more]
A0A402CNU9_9BACT5.940e-540.78Globin n=1 Tax=Capsulimonas corticalis TaxID=22190... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1060contigD-mesarthrocarpus_Contig1060:5313..7122 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7G731
PFAMsAnk_2
Model size1116
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.6e-86
EggNOG OGsCOG0666@1|root,KOG4177@2759|Eukaryota
Ec32 ortholog descriptionAnkyrin repeat-containing domain
Ec32 orthologEc-01_011230.1
Descriptionspectrin binding
Cds size1116
COG categoryI
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789196.3104126-CDS-D-mesarthrocarpus_Contig1060:5312..60081680789196.3104126-CDS-D-mesarthrocarpus_Contig1060:5312..6008Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1060 5313..6008 +
1680789196.3234165-CDS-D-mesarthrocarpus_Contig1060:6702..71221680789196.3234165-CDS-D-mesarthrocarpus_Contig1060:6702..7122Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1060 6703..7122 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1060.1.1prot_D-mesarthrocarpus_Contig1060.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig1060 5313..7122 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig1060.1.1

>prot_D-mesarthrocarpus_Contig1060.1.1 ID=prot_D-mesarthrocarpus_Contig1060.1.1|Name=mRNA_D-mesarthrocarpus_Contig1060.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=372bp
MDANREKIINQDDESASTQPHLVERQLAVAERKVQNSLYISEAHEGLAAQ
AVARERAAEIRATEYGRRLQRALEKLEATERRDRLVHLEEACKKDADSIH
AAESEIRSYHLDPDLHLPVSTAQRRGLARAEQRLCRLRKRLKSQTATLNH
TRSLEKLHEDLRTAASAGDCASTSRLLASGISVNVPDKSGFSAFLYSCGQ
SNPELVRMMLAAGGDAQDGDGKITALHVAARNGNVGVIKELLRGGAPLSA
RDSVGGTPLHTMAAYNHEAALRTLLEAGADVNLLDEGANTPLHILASRQQ
QHHHHHHHHHQGGLAGATTVAKIGATSVGTLLLEWGASPTVKNSEGLTPL
AVALRARNQGVVLAYRGFFGDE
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mRNA from alignment at D-mesarthrocarpus_Contig1060:5313..7122+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig1060.1.1 ID=mRNA_D-mesarthrocarpus_Contig1060.1.1|Name=mRNA_D-mesarthrocarpus_Contig1060.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1810bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1060:5313..7122+ (Discosporangium mesarthrocarpum MT17_79)
ATGGATGCGAACAGAGAAAAGATTATCAACCAGGATGATGAAAGCGCCAG
CACTCAGCCCCACTTGGTCGAGCGCCAGCTGGCTGTCGCTGAACGGAAAG
TTCAGAACTCCCTTTACATAAGTGAGGCTCACGAGGGGCTTGCTGCTCAA
GCTGTGGCGAGAGAAAGAGCTGCAGAAATACGGGCGACGGAGTACGGTCG
ACGCCTGCAGCGAGCATTGGAGAAGCTTGAGGCCACAGAGCGCAGGGATC
GATTGGTCCACCTCGAAGAGGCATGCAAGAAGGACGCCGACAGCATTCAT
GCTGCCGAATCAGAAATCCGCTCTTATCATCTCGATCCAGACCTGCACCT
GCCCGTCAGCACTGCCCAGCGTCGGGGTCTGGCGCGTGCAGAGCAGCGGC
TGTGCCGTTTGCGCAAACGGCTCAAGAGCCAGACGGCAACACTGAACCAT
ACTCGGAGCCTCGAGAAGCTCCACGAGGATCTTCGAACCGCCGCAAGTGC
GGGTGATTGTGCCTCAACATCTCGGCTGCTCGCATCTGGAATTTCGGTCA
ATGTCCCGGACAAGTCTGGATTCTCAGCCTTCCTCTACAGCTGTGGGCAA
TCGAATCCTGAATTGGTACGCATGATGCTTGCAGCTGGGGGGGACGCCCA
GGATGGTGATGGGAAGATCACCGCCCTTCACGTTGCAGCACGGAATGTAA
GTATCTCCCCATAGCCCATTATCAGCGCCCATCGTAAAGATATCAAATGC
ACGTTGTATCGATGTCAATGGGCTTGTTCAGGCTTCGAAGAAAGTACTAC
CTTGGGTTAAGCACCCACTGCAGCTTCAGCTGACTATTTTGTGGCCCTTC
GAGGTGAGGTGGCATGGGACACTGCCATAGCACCAGTGCGATGCAGTTTT
CGATTTTTGGCGATACAAGGCACCGGGACACTGTTGTAGCGCCCCCCTAT
ACTTCTGAGGGAGTGTTTTTAACAATATGAACTGTTCACCGAGAAACGCA
CCCCACCACATACCAAACCCCAGTTTCAGTTGGATTTTTGTTGCCCCTCA
CCCTAGACCTGCACAAAAAAACATAAAAAAAAATGTTTTTTTTTATCCCT
GACTTATCATGTGTTTGTTTCCGGCCGCACTAGGCTCGCAGTCACAGCAC
CATGCACCTTGGCGCAATTTGGTCATCACAGCGCACCGGTGCCACCTCGA
GGGGCCTTGCAGTACAGCCACACTTCCTGCAAAGACAGCACTACGCTGAC
CACACCACCCCCCCACAAAAGCTTCGCCCATAACACCTACCCCAAGCAAC
CACCAATCCAGGCGTCCACCGTTCTGCACCGCCGCACCTCCACCCCGGGG
GGGTTCGCTGTCTCTGAAATAACACTGCTACACTGCACAGGGCAACGTGG
GCGTGATCAAGGAACTCCTCAGGGGGGGTGCACCCCTCTCCGCAAGGGAC
TCTGTCGGCGGCACCCCCCTGCATACCATGGCTGCCTACAACCACGAGGC
CGCCTTACGAACCCTGCTGGAGGCCGGCGCAGACGTTAACCTACTTGATG
AGGGGGCCAACACCCCGCTCCATATCTTGGCCTCCAGGCAGCAGCAGCAC
CACCACCACCACCACCACCACCACCAGGGTGGCCTGGCAGGGGCCACCAC
CGTAGCCAAGATTGGTGCAACATCTGTGGGAACACTCTTGCTGGAGTGGG
GCGCTTCCCCGACCGTCAAGAACTCAGAGGGTCTGACGCCCTTGGCAGTC
GCGCTCCGGGCAAGGAACCAGGGGGTGGTGTTGGCATATCGAGGGTTTTT
CGGTGATGAA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1060:5313..7122+

>mRNA_D-mesarthrocarpus_Contig1060.1.1 ID=mRNA_D-mesarthrocarpus_Contig1060.1.1|Name=mRNA_D-mesarthrocarpus_Contig1060.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1116bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1060:5313..7122+ (Discosporangium mesarthrocarpum MT17_79)
ATGGATGCGAACAGAGAAAAGATTATCAACCAGGATGATGAAAGCGCCAG
CACTCAGCCCCACTTGGTCGAGCGCCAGCTGGCTGTCGCTGAACGGAAAG
TTCAGAACTCCCTTTACATAAGTGAGGCTCACGAGGGGCTTGCTGCTCAA
GCTGTGGCGAGAGAAAGAGCTGCAGAAATACGGGCGACGGAGTACGGTCG
ACGCCTGCAGCGAGCATTGGAGAAGCTTGAGGCCACAGAGCGCAGGGATC
GATTGGTCCACCTCGAAGAGGCATGCAAGAAGGACGCCGACAGCATTCAT
GCTGCCGAATCAGAAATCCGCTCTTATCATCTCGATCCAGACCTGCACCT
GCCCGTCAGCACTGCCCAGCGTCGGGGTCTGGCGCGTGCAGAGCAGCGGC
TGTGCCGTTTGCGCAAACGGCTCAAGAGCCAGACGGCAACACTGAACCAT
ACTCGGAGCCTCGAGAAGCTCCACGAGGATCTTCGAACCGCCGCAAGTGC
GGGTGATTGTGCCTCAACATCTCGGCTGCTCGCATCTGGAATTTCGGTCA
ATGTCCCGGACAAGTCTGGATTCTCAGCCTTCCTCTACAGCTGTGGGCAA
TCGAATCCTGAATTGGTACGCATGATGCTTGCAGCTGGGGGGGACGCCCA
GGATGGTGATGGGAAGATCACCGCCCTTCACGTTGCAGCACGGAATGGCA
ACGTGGGCGTGATCAAGGAACTCCTCAGGGGGGGTGCACCCCTCTCCGCA
AGGGACTCTGTCGGCGGCACCCCCCTGCATACCATGGCTGCCTACAACCA
CGAGGCCGCCTTACGAACCCTGCTGGAGGCCGGCGCAGACGTTAACCTAC
TTGATGAGGGGGCCAACACCCCGCTCCATATCTTGGCCTCCAGGCAGCAG
CAGCACCACCACCACCACCACCACCACCACCAGGGTGGCCTGGCAGGGGC
CACCACCGTAGCCAAGATTGGTGCAACATCTGTGGGAACACTCTTGCTGG
AGTGGGGCGCTTCCCCGACCGTCAAGAACTCAGAGGGTCTGACGCCCTTG
GCAGTCGCGCTCCGGGCAAGGAACCAGGGGGTGGTGTTGGCATATCGAGG
GTTTTTCGGTGATGAA
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