mRNA_D-mesarthrocarpus_Contig10590.3.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10590.3.1
Unique NamemRNA_D-mesarthrocarpus_Contig10590.3.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10590.3.1 vs. uniprot
Match: A0A6A5LCJ6_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5LCJ6_LUPAL)

HSP 1 Score: 338 bits (866), Expect = 9.970e-111
Identity = 168/268 (62.69%), Postives = 208/268 (77.61%), Query Frame = 1
Query:    1 MKTYSAKPSEVEAKWWLIDADDIVLGRMAVIIADRLRGKHKPTYTPNIDCGDHVVVVNAEKVRLTGNKKRDDKTYYRHTGYPGGIKSVTAAELLDGEHPERVILKAVERMLPKTKMGRTQIGKLRVYAGTEHPHVAQEPTAIDI---------DELGRTYATGKRKNAIARVWIKPGSGQLSINGRDAETYFARPVLRMILAQPFQVADRIGQYDIYCTVTGGGLSGQAGAVRHGISKALALREPDLRPVLKKVGMLTRDSRVVERKK 777
            MKT S KP+EV+ KW +IDA+ +V+GR+A I+A RLRGKHK  YTP++DCGD+V+V+NAEKV+ TG +K + K+Y+ HTGYPGGIK  TA  +L+G  PERV+ KAVERMLP+  + R  +G LRVY GTEHPHVAQ+P  +D+         D  GR YATGKRK+A+ARVWIKPG+G++ +N R  ETYFARPVLRMIL QP ++A R+ QYDI  TV GGGLSGQAGAVRHG+SKAL   EP+LR  LK+ G LTRD+RVVERKK
Sbjct:    1 MKTTSLKPAEVDKKWIVIDAEGLVVGRLASIVAMRLRGKHKAAYTPHVDCGDNVIVINAEKVKFTG-RKYNQKSYFYHTGYPGGIKERTAKFILEGRFPERVVEKAVERMLPRGPLFRQILGNLRVYKGTEHPHVAQQPQTLDVGALNRKNKLDAQGRAYATGKRKDAVARVWIKPGTGKVVVNKRPVETYFARPVLRMILRQPLEIAGRVDQYDITVTVAGGGLSGQAGAVRHGLSKALTYYEPELRAPLKREGFLTRDARVVERKK 267          
BLAST of mRNA_D-mesarthrocarpus_Contig10590.3.1 vs. uniprot
Match: A0A812NUK4_SYMMI (ArgC protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812NUK4_SYMMI)

HSP 1 Score: 303 bits (776), Expect = 7.260e-93
Identity = 150/274 (54.74%), Postives = 196/274 (71.53%), Query Frame = 1
Query:    1 MKTYSAKPSEVEAKWWLIDADDIVLGRMAVIIADRLRGKHKPTYTPNIDCGDHVVVVNAEKVRLTGNKKRDDKTYYRHTGYPGGIKSVTAAELLDGEHPERVILKAVERMLPKTKMGRTQIGKLRVYA--------------------GTEHPHVAQEPTAID--IDELGRTYATGKRKNAIARVWIKPGSGQLSINGRDAETYFARPVLRMILAQPFQVADRIGQYDIYCTVTGGGLSGQAGAVRHGISKALALREPDLRPVLKKVGMLTRDS 756
            MKT+SA P+++E KW L+DA+D+++GR+A  +A RLRGKHKP++TPN+DCGD+V+V+NAEK+ LTG KK  DK YY HTGYPGGIK   A ++L+G  P++V+  AV+RMLPK  +G+  +  L+VY                     G E    A+     +  ID+LGR+YATGKRK+A+ARVWIK GSG+ ++NG+D + YFAR  LRMI+ QPF +A R G++D+  TV GGGLSGQAGAVRHGISKAL   EP LRPVLKK G LTRD+
Sbjct:  333 MKTFSATPADIEKKWILVDAEDVIVGRLAAFVASRLRGKHKPSFTPNMDCGDNVIVINAEKIALTG-KKLTDKKYYWHTGYPGGIKERAADKMLEGPRPDKVVTLAVQRMLPKGALGKQMLSNLKVYVVMAEEVHSLEDLKDLSPAADGAEAVAAAEVEITAEPQIDDLGRSYATGKRKDAVARVWIKRGSGKFTVNGKDGDAYFARATLRMIIRQPFGIAGRDGEFDVTATVKGGGLSGQAGAVRHGISKALVAYEPGLRPVLKKEGFLTRDA 605          
BLAST of mRNA_D-mesarthrocarpus_Contig10590.3.1 vs. uniprot
Match: UPI0005F4ADE1 (39S ribosomal protein L13, mitochondrial-like n=1 Tax=Vollenhovia emeryi TaxID=411798 RepID=UPI0005F4ADE1)

HSP 1 Score: 281 bits (720), Expect = 6.480e-92
Identity = 142/275 (51.64%), Postives = 190/275 (69.09%), Query Frame = 1
Query:    1 MKTYSAKPSEVEAKWWLIDADDIVLGRMAVIIADRLRGKHKPTYTPNIDCGDHVVVVNAEKVRLTGNKKRDDKTYYRHTGYPGGIKSVTAAELLDGEHPERVILKAVERMLPKTKMGRTQIGKLRVYAGTEHPHVAQEPTAIDIDELGRTYATGKRKNAIARVWIKPGSGQLSINGR-DAETYFARPVLRMILAQPFQVADRIGQYDIYCTVTGGGLSGQAGAVRHGISKALALREPDLRPVLKKVGMLTRDSRVVERKKYGKAKARRSFQFSKR 822
            MKT+  K  +++ KW++IDA+ +V+GR+A  +A  LRGKHKP YTP++DCGD+V+++NAEKV  TG KK  DK YY+HTGY GG+K  T   +L+G+ PER+I  AV+RML    M R +   L VY+G+EH H  Q+P  ID   L R     +RK ++ARVWIKPGSG+ S+N + D  +YF R  +  I+  PF     + +YD++ TV GGGLSGQAGA+ HGIS+AL+    DL  +L+    LTRDSRVVERKKYG+ KAR+  QFSKR
Sbjct:    1 MKTFFLKEKQIDKKWFVIDAEGLVVGRLAAFVATLLRGKHKPEYTPHMDCGDNVIIINAEKVHFTG-KKLKDKVYYKHTGYSGGLKKTTPNNILNGKFPERIIKVAVKRMLDDGPMARRRFENLYVYSGSEHKHQGQQPEKIDFASLNR-----RRKESVARVWIKPGSGKFSVNKKGDLISYFKRESVCQIVKMPFVATSTLDKYDVFATVKGGGLSGQAGALAHGISRALSSVSQDLHSILRNGEFLTRDSRVVERKKYGQHKARKKCQFSKR 269          
BLAST of mRNA_D-mesarthrocarpus_Contig10590.3.1 vs. uniprot
Match: A0A6A6K1V5_HEVBR (Uncharacterized protein n=2 Tax=cellular organisms TaxID=131567 RepID=A0A6A6K1V5_HEVBR)

HSP 1 Score: 276 bits (706), Expect = 1.280e-89
Identity = 140/276 (50.72%), Postives = 188/276 (68.12%), Query Frame = 1
Query:    4 KTYSAKPSEVEAKWWLIDADDIVLGRMAVIIADRLRGKHKPTYTPNIDCGDHVVVVNAEKVRLTGNKKRDDKTYYRHTGYPGGIKSVTAAELLDGEHPERVILKAVERMLPKTKMGRTQIGKLRVYAGTEHPHVAQEPTAIDIDELGRTYATGKR---KNAIARVWIKPGSGQLSINGRDAETYFARPVLRMILAQPFQVADRIGQYDIYCTVTGGGLSGQAGAVRHGISKALALREPDLRPVLKKVGMLTRDSRVVERKKYGKAKARRSFQFSKR 822
            +T+S K S+V+ +W LIDAD  V+GR+A  +A  LRGK+KP YTP++DCGD+V+++NA + R TGNK++D K YYRHTGYPGG+KS T  ++     PER++  AV RML    + R +   L+VYAG  H H AQ+P  +D   +    A G+    K A+A+VW+K GSG +++NG +   YF R  L   +  PF V+  +G YD+   V+GGG+SGQAGA+ HGISKAL    P L PVL++ G LTRDSRVVERKKYG+ KAR+  QFSKR
Sbjct:    7 RTFSLKASQVDKRWVLIDADGAVVGRLAAFVASVLRGKNKPEYTPHMDCGDNVIIINAGRARFTGNKRKD-KVYYRHTGYPGGLKSCTPIDIERAGRPERIVKMAVWRMLGDGPLARRRFKNLKVYAGPVHGHDAQKPALLDFGAVNVKNARGRNDRGKTAVAKVWLKVGSGVITVNGVECAQYFKRESLCRRVNAPFGVSSSVGCYDVKAVVSGGGISGQAGALAHGISKALKCMNPALHPVLRQSGFLTRDSRVVERKKYGQHKARKKCQFSKR 281          
BLAST of mRNA_D-mesarthrocarpus_Contig10590.3.1 vs. uniprot
Match: A0A6A5KW53_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5KW53_LUPAL)

HSP 1 Score: 262 bits (669), Expect = 1.900e-81
Identity = 146/293 (49.83%), Postives = 186/293 (63.48%), Query Frame = 1
Query:    1 MKTYSAKPSEVEAKWWLIDADDIVLGRMAVIIADRLRGKHKPTYTPNIDCGDHVVVVNAEKVRLTGNKKRDDKTYYRHTGYPGGIKSVTAAELLDGEHPERVILKAVERMLPKTKMG--------------RTQIGKLRVYAGTEHPHVA------QEPTAID-IDELGRTYATGKRKNAIARVWIKPGSGQLSINGRDAETYFARPVLRMILAQPFQVADRIGQYDIYCTVTGGGLSGQAGAVRHGISKALALREPDLRPVLKKVGMLTRDSRVVERKKYGKAKARRSFQFS 816
            MKT S KP+EV+ KW +I    +V+GR+A I+A RLRGKHK  YTP++DCGD+V+V+NAEKV+ TG +K + K+Y+ H    G  +           HP   +  A  R   +                  R  +  L+  A     +        + P  +  +D  GR YATGKRK+A+ARVWIKPG+G++ +N R  ETYFARPVLRMIL QP ++A R+ QYDI  TV GGGLSGQAGAVRHG+SKAL   EP+LR  LK+ G LTRD+RVVERKKYG+AKARRSFQFS
Sbjct:    1 MKTTSLKPAEVDKKWIVIGRGSLVVGRLASIVAMRLRGKHKAAYTPHVDCGDNVIVINAEKVKFTG-RKYNQKSYFYHNRLSGRYQGAHGQV-----HPRGALPGARHRASARCPAAADARRXXXXXXXXXRVTMATLQSLADLNRANTGAVDPANEAPVHVQKLDAQGRAYATGKRKDAVARVWIKPGTGKVVVNKRPVETYFARPVLRMILRQPLEIAGRVDQYDITVTVAGGGLSGQAGAVRHGLSKALTYYEPELRAPLKREGFLTRDARVVERKKYGRAKARRSFQFS 287          
BLAST of mRNA_D-mesarthrocarpus_Contig10590.3.1 vs. uniprot
Match: A0A848W8J3_9PROT (50S ribosomal protein L13 n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A848W8J3_9PROT)

HSP 1 Score: 243 bits (619), Expect = 3.410e-78
Identity = 113/146 (77.40%), Postives = 130/146 (89.04%), Query Frame = 1
Query:    4 KTYSAKPSEVEAKWWLIDADDIVLGRMAVIIADRLRGKHKPTYTPNIDCGDHVVVVNAEKVRLTGNKKRDDKTYYRHTGYPGGIKSVTAAELLDGEHPERVILKAVERMLPKTKMGRTQIGKLRVYAGTEHPHVAQEPTAIDIDEL 441
            +TYSAKPSEV+AKWW+IDA+D+VLGRMAVI+AD LRGKHKP YTPNIDCGDH+V++NAEKV LTGNK R DKTYYRHTGYPGGIKS TA ++LDGEH +RVI KAVERMLPKTKMGR QI KL++YAGTEHPH AQ+P  I++  L
Sbjct:    7 RTYSAKPSEVDAKWWIIDAEDLVLGRMAVIVADWLRGKHKPMYTPNIDCGDHIVIINAEKVHLTGNK-RADKTYYRHTGYPGGIKSRTAGDILDGEHADRVIRKAVERMLPKTKMGRAQIKKLKIYAGTEHPHEAQQPEIINVAAL 151          
BLAST of mRNA_D-mesarthrocarpus_Contig10590.3.1 vs. uniprot
Match: A0A6L5C5V5_9INSE (Uncharacterized protein n=1 Tax=Ephemera danica TaxID=1049336 RepID=A0A6L5C5V5_9INSE)

HSP 1 Score: 242 bits (617), Expect = 2.130e-76
Identity = 130/275 (47.27%), Postives = 177/275 (64.36%), Query Frame = 1
Query:    1 MKTYSAKPSEVEAKWWLIDADDIVLGRMAVIIADRLRGKHKPTYTPNIDCGDHVVVVNAEKVRLTGNKKRDDKTYYRHTGYPGGIKSVTAAELLDGEHPERVILKAVERMLPKTKMGRTQIGKLRVYAGTEHPHVAQEPTAIDIDELGRTYATGKRKNAIARVWIK-PGSGQLSINGRDAETYFARPVLRMILAQPFQVADRIGQYDIYCTVTGGGLSGQAGAVRHGISKALALREPDLRPVLKKVGMLTRDSRVVERKKYGKAKARRSFQFSKR 822
            M TY  KP+ V+ +W L++A+   LGR+A  +A  LRGKH+PT+TPN+D GDHVV++NAEK+ LTGNK +D K Y  H+GYPGG+K+  A  L   + P  ++++A+E MLPK  +G     KLRVY   E   +A              YATG+RK A+AR W+    +G++++N +  E  F R  LR I+  P ++A   G+Y I  TV GGG +GQAGA+RH I++AL    P  R  LKK G+LTRDSRV ERKKYG+  AR+ FQ+SKR
Sbjct:    1 MTTYLEKPANVKEQWHLVNAEGKTLGRLAAKVAGILRGKHRPTFTPNVDMGDHVVIINAEKIHLTGNKMQD-KLYIHHSGYPGGLKTTDAQHLFKKD-PTELLVRAIEGMLPKNPLGNGMAKKLRVYDQKETSDMAAVTQ----------YATGRRKCAVARAWVTGTANGEITVNDKPLEKAFPRLTLRQIIQLPLEMAGLTGKYSIKSTVYGGGPTGQAGALRHAIARALVALSPTARTPLKKEGLLTRDSRVKERKKYGQKGARKRFQYSKR 263          
BLAST of mRNA_D-mesarthrocarpus_Contig10590.3.1 vs. uniprot
Match: A0A2E3XGA1_9PROT (50S ribosomal protein L13 n=2 Tax=Rhodospirillales TaxID=204441 RepID=A0A2E3XGA1_9PROT)

HSP 1 Score: 237 bits (605), Expect = 4.540e-76
Identity = 111/156 (71.15%), Postives = 135/156 (86.54%), Query Frame = 1
Query:    4 KTYSAKPSEVEAKWWLIDADDIVLGRMAVIIADRLRGKHKPTYTPNIDCGDHVVVVNAEKVRLTGNKKRDDKTYYRHTGYPGGIKSVTAAELLDGEHPERVILKAVERMLPKTKMGRTQIGKLRVYAGTEHPHVAQEPTAIDIDELGRTYATGKRK 471
            KTYSAKPS+VEAKWW+IDA+D+VLGRMAVI+A+RLRGKHK  YTPNIDCGDH+V++NA+KV L+GNKK D+KTYYRHTGYPGGIKS TA ++L+G H +RVI KAVERMLPKTKMGR Q+ KL+VY+GT+HPH AQ+P  ID+ +L    +  KRK
Sbjct:    7 KTYSAKPSDVEAKWWIIDAEDLVLGRMAVIVANRLRGKHKAMYTPNIDCGDHIVIINADKVYLSGNKK-DNKTYYRHTGYPGGIKSRTAGQILEGPHSDRVIRKAVERMLPKTKMGRAQLRKLKVYSGTDHPHEAQQPEVIDVGQLN---SKNKRK 158          
BLAST of mRNA_D-mesarthrocarpus_Contig10590.3.1 vs. uniprot
Match: A0A2E7PP74_9PROT (30S ribosomal protein S9 n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E7PP74_9PROT)

HSP 1 Score: 236 bits (601), Expect = 2.480e-75
Identity = 117/140 (83.57%), Postives = 128/140 (91.43%), Query Frame = 1
Query:  403 VAQEPTAIDIDELGRTYATGKRKNAIARVWIKPGSGQLSINGRDAETYFARPVLRMILAQPFQVADRIGQYDIYCTVTGGGLSGQAGAVRHGISKALALREPDLRPVLKKVGMLTRDSRVVERKKYGKAKARRSFQFSKR 822
            VA  P    IDE GRTYATGKRK+A+ARVWIKPG+GQL++NGR  E YFARPVLRM+L+QPFQV DR+GQYDI CTVTGGGLSGQAGAVRHGISKALALREP+LRP+LKKVGMLTRDSRVVERKKYG+AKARRSFQFSKR
Sbjct:   29 VAPVPAEPKIDEHGRTYATGKRKDAVARVWIKPGNGQLTVNGRTGEVYFARPVLRMVLSQPFQVTDRLGQYDIVCTVTGGGLSGQAGAVRHGISKALALREPELRPILKKVGMLTRDSRVVERKKYGRAKARRSFQFSKR 168          
BLAST of mRNA_D-mesarthrocarpus_Contig10590.3.1 vs. uniprot
Match: A0A2S6QHE0_9PROT (50S ribosomal protein L13 n=1 Tax=Alphaproteobacteria bacterium MarineAlpha12_Bin1 TaxID=2013107 RepID=A0A2S6QHE0_9PROT)

HSP 1 Score: 230 bits (586), Expect = 3.460e-73
Identity = 105/146 (71.92%), Postives = 128/146 (87.67%), Query Frame = 1
Query:    4 KTYSAKPSEVEAKWWLIDADDIVLGRMAVIIADRLRGKHKPTYTPNIDCGDHVVVVNAEKVRLTGNKKRDDKTYYRHTGYPGGIKSVTAAELLDGEHPERVILKAVERMLPKTKMGRTQIGKLRVYAGTEHPHVAQEPTAIDIDEL 441
            K+YSAKPSEV+AKWW+IDA+D VLGRMAVI+ADRLRGKHKP +TPNIDCGDH++++NAEKV L+GNKK D+K Y+RHTGYPGG+KS TA E+L+G+H +RVI KAVERMLPKTKMGR Q+ KL+VY G +HPH +Q+P  IDI  L
Sbjct:    7 KSYSAKPSEVDAKWWIIDAEDAVLGRMAVIVADRLRGKHKPMFTPNIDCGDHIIIINAEKVYLSGNKK-DNKVYHRHTGYPGGLKSRTAGEILEGDHSDRVIRKAVERMLPKTKMGRAQLKKLKVYPGPDHPHESQQPENIDIAAL 151          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10590.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A5LCJ6_LUPAL9.970e-11162.69Uncharacterized protein n=1 Tax=Lupinus albus TaxI... [more]
A0A812NUK4_SYMMI7.260e-9354.74ArgC protein n=1 Tax=Symbiodinium microadriaticum ... [more]
UPI0005F4ADE16.480e-9251.6439S ribosomal protein L13, mitochondrial-like n=1 ... [more]
A0A6A6K1V5_HEVBR1.280e-8950.72Uncharacterized protein n=2 Tax=cellular organisms... [more]
A0A6A5KW53_LUPAL1.900e-8149.83Uncharacterized protein n=1 Tax=Lupinus albus TaxI... [more]
A0A848W8J3_9PROT3.410e-7877.4050S ribosomal protein L13 n=1 Tax=Alphaproteobacte... [more]
A0A6L5C5V5_9INSE2.130e-7647.27Uncharacterized protein n=1 Tax=Ephemera danica Ta... [more]
A0A2E3XGA1_9PROT4.540e-7671.1550S ribosomal protein L13 n=2 Tax=Rhodospirillales... [more]
A0A2E7PP74_9PROT2.480e-7583.5730S ribosomal protein S9 n=3 Tax=Alphaproteobacter... [more]
A0A2S6QHE0_9PROT3.460e-7371.9250S ribosomal protein L13 n=1 Tax=Alphaproteobacte... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10590contigD-mesarthrocarpus_Contig10590:3120..4070 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1122137.AQXF01000002_gene282
Preferred namerplM
PFAMsRibosomal_L13
Model size825
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K02871
KEGG Pathwayko03010,map03010
KEGG ModuleM00178,M00179
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
Exons2
Evalue5.99e-67
EggNOG OGsCOG0102@1|root,COG0102@2|Bacteria,1RA11@1224|Proteobacteria,2U5FM@28211|Alphaproteobacteria
DescriptionThis protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
Cds size825
COG categoryJ
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789194.7709923-CDS-D-mesarthrocarpus_Contig10590:3119..35481680789194.7709923-CDS-D-mesarthrocarpus_Contig10590:3119..3548Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10590 3120..3548 +
1680789194.7835252-CDS-D-mesarthrocarpus_Contig10590:3674..40701680789194.7835252-CDS-D-mesarthrocarpus_Contig10590:3674..4070Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10590 3675..4070 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10590.3.1prot_D-mesarthrocarpus_Contig10590.3.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10590 3120..4070 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10590.3.1

>prot_D-mesarthrocarpus_Contig10590.3.1 ID=prot_D-mesarthrocarpus_Contig10590.3.1|Name=mRNA_D-mesarthrocarpus_Contig10590.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=275bp
MKTYSAKPSEVEAKWWLIDADDIVLGRMAVIIADRLRGKHKPTYTPNIDC
GDHVVVVNAEKVRLTGNKKRDDKTYYRHTGYPGGIKSVTAAELLDGEHPE
RVILKAVERMLPKTKMGRTQIGKLRVYAGTEHPHVAQEPTAIDIDELGRT
YATGKRKNAIARVWIKPGSGQLSINGRDAETYFARPVLRMILAQPFQVAD
RIGQYDIYCTVTGGGLSGQAGAVRHGISKALALREPDLRPVLKKVGMLTR
DSRVVERKKYGKAKARRSFQFSKR*
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mRNA from alignment at D-mesarthrocarpus_Contig10590:3120..4070+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10590.3.1 ID=mRNA_D-mesarthrocarpus_Contig10590.3.1|Name=mRNA_D-mesarthrocarpus_Contig10590.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=951bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10590:3120..4070+ (Discosporangium mesarthrocarpum MT17_79)
ATGAAGACCTATTCCGCCAAACCGTCGGAAGTCGAGGCCAAATGGTGGCT TATCGACGCTGATGACATCGTACTCGGCCGCATGGCCGTGATCATCGCCG ACCGCCTGCGTGGCAAGCACAAGCCGACCTACACACCGAACATCGATTGC GGCGACCATGTCGTCGTCGTCAATGCCGAGAAGGTGCGGCTGACCGGCAA CAAGAAGCGCGACGACAAGACCTATTACCGCCACACCGGCTATCCGGGCG GTATCAAGAGTGTGACCGCCGCCGAACTGCTCGACGGCGAGCATCCGGAG CGGGTCATCCTGAAAGCGGTCGAACGCATGCTGCCGAAGACCAAGATGGG CCGTACGCAGATCGGCAAGCTGCGCGTCTATGCCGGCACCGAGCATCCGC ACGTGGCGCAGGAGCCGACGGCGATCGATGTTGCCTCGCTCAACGCCAAG AACAAGAGGAGTGCGTAAGCCATGACAGACGTCACCGAAGTCGTGGCAGA AGCCGGCGCCGAGACGCCGGTCGAGGCCGTATCCGTCGCCACCGCCGAAC CGCAGATCGACGAGCTTGGCCGCACCTATGCGACCGGCAAGCGCAAGAAC GCCATTGCGCGCGTCTGGATCAAGCCGGGTAGCGGACAGCTGTCGATCAA CGGCCGCGACGCCGAGACCTATTTCGCGCGTCCGGTGCTGCGCATGATCC TCGCCCAGCCGTTCCAGGTCGCCGACCGGATCGGCCAGTACGACATCTAC TGCACGGTTACCGGCGGTGGCCTGTCGGGCCAGGCCGGCGCGGTGCGCCA CGGTATTTCCAAGGCGTTGGCGCTGCGCGAGCCGGACCTGCGGCCGGTCC TCAAGAAGGTCGGCATGCTGACCCGCGATTCACGCGTCGTCGAACGCAAG AAGTACGGCAAGGCCAAGGCCCGCCGCAGCTTCCAGTTCTCGAAGCGCTG A
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10590:3120..4070+

>mRNA_D-mesarthrocarpus_Contig10590.3.1 ID=mRNA_D-mesarthrocarpus_Contig10590.3.1|Name=mRNA_D-mesarthrocarpus_Contig10590.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=825bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10590:3120..4070+ (Discosporangium mesarthrocarpum MT17_79)
ATGAAGACCTATTCCGCCAAACCGTCGGAAGTCGAGGCCAAATGGTGGCT
TATCGACGCTGATGACATCGTACTCGGCCGCATGGCCGTGATCATCGCCG
ACCGCCTGCGTGGCAAGCACAAGCCGACCTACACACCGAACATCGATTGC
GGCGACCATGTCGTCGTCGTCAATGCCGAGAAGGTGCGGCTGACCGGCAA
CAAGAAGCGCGACGACAAGACCTATTACCGCCACACCGGCTATCCGGGCG
GTATCAAGAGTGTGACCGCCGCCGAACTGCTCGACGGCGAGCATCCGGAG
CGGGTCATCCTGAAAGCGGTCGAACGCATGCTGCCGAAGACCAAGATGGG
CCGTACGCAGATCGGCAAGCTGCGCGTCTATGCCGGCACCGAGCATCCGC
ACGTGGCGCAGGAGCCGACGGCGATCGATATCGACGAGCTTGGCCGCACC
TATGCGACCGGCAAGCGCAAGAACGCCATTGCGCGCGTCTGGATCAAGCC
GGGTAGCGGACAGCTGTCGATCAACGGCCGCGACGCCGAGACCTATTTCG
CGCGTCCGGTGCTGCGCATGATCCTCGCCCAGCCGTTCCAGGTCGCCGAC
CGGATCGGCCAGTACGACATCTACTGCACGGTTACCGGCGGTGGCCTGTC
GGGCCAGGCCGGCGCGGTGCGCCACGGTATTTCCAAGGCGTTGGCGCTGC
GCGAGCCGGACCTGCGGCCGGTCCTCAAGAAGGTCGGCATGCTGACCCGC
GATTCACGCGTCGTCGAACGCAAGAAGTACGGCAAGGCCAAGGCCCGCCG
CAGCTTCCAGTTCTCGAAGCGCTGA
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