mRNA_D-mesarthrocarpus_Contig10586.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10586.1.1 vs. uniprot
Match: D7G847_ECTSI (NTP_transf_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G847_ECTSI) HSP 1 Score: 177 bits (450), Expect = 3.160e-42 Identity = 89/156 (57.05%), Postives = 112/156 (71.79%), Query Frame = 3
Query: 465 GSFSLQAPPHPQ----VRGEIFPPPMGHHVVMLMPEDLEKEDLSGTTPGEALLKFLEYFGRRFDAGQFGISVGRGPLGNPFLLSKAVDPVTGMAVMDAHVVIEDPLDRGQNVARSCFAFPQVQWLFAQCLSILEIRGQEVAEYDPDADLLHLLLYF 920
G PP Q + E+F M H + L E++++ DLSG TPGE L++FL +FGR+FD + GISVGRG + NPF L+ +VDP TGM VM+AHVVIEDPLDR QNVARSCF FPQVQWLF Q LS+L+ RG ++AE+D DADLL +LLY+
Sbjct: 1939 GGARAPTPPQAQYNLGMNAELFN--MKHMEINLSQEEVDRADLSGMTPGEVLVRFLAFFGRQFDPTRVGISVGRGAISNPFALTPSVDPRTGMPVMEAHVVIEDPLDRDQNVARSCFGFPQVQWLFGQYLSVLQERGADMAEFDRDADLLQMLLYY 2092
BLAST of mRNA_D-mesarthrocarpus_Contig10586.1.1 vs. uniprot
Match: A0A835Z4K4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4K4_9STRA) HSP 1 Score: 121 bits (304), Expect = 2.000e-24 Identity = 65/128 (50.78%), Postives = 81/128 (63.28%), Query Frame = 3
Query: 561 DLEKEDLSGTTPGEALLKFLEYFGRRFDAGQFGISVGRGPLGNPFLLSKAVDPVTGMAVMDAHVVIEDPLDRGQN--------VARSCFAFPQVQWLFAQCLSILEIRGQEVAEYDPDADLLHLLLYF 920
+LE EDLS TPG LLKFL ++ R FD +GISVGRG LG+PF L VD TG+ A + IEDPLD +N V+ SCF FP+VQWLF+QCL+ LE+RG E +PD +LL L +
Sbjct: 1829 ELEAEDLSDMTPGACLLKFLAFYSRAFDPLSYGISVGRGRLGSPFPLDLPVDAATGLRAAAA-LTIEDPLDMQRNDPSATIRNVSHSCFRFPEVQWLFSQCLAELEVRGPEKLRRNPDTNLLQDLCQY 1955
BLAST of mRNA_D-mesarthrocarpus_Contig10586.1.1 vs. uniprot
Match: A0A7S2I5M6_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I5M6_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 3.380e-7 Identity = 39/97 (40.21%), Postives = 55/97 (56.70%), Query Frame = 3
Query: 606 LLKFLEYFGRRFDAGQFGISVGRG--PLGN--------PFLLSK---AVDPVTGMAVMDAHVVIEDPLD--RGQNVARSCFAFPQVQWLFAQCLSIL 851
L+ FL ++G+ FD+ I VG P N PF+ + +DPVTGM +D +V+ DPL+ G NVARSCFA+ ++W+FAQC L
Sbjct: 3 LMHFLLFYGQYFDSQSTAIDVGGANHPEYNRYTHYQLPPFMPRRPGGTIDPVTGMFTVDP-IVVYDPLEGAEGNNVARSCFAWGSIRWVFAQCYMTL 98
BLAST of mRNA_D-mesarthrocarpus_Contig10586.1.1 vs. uniprot
Match: A0A7S1YUY2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YUY2_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 4.490e-7 Identity = 41/102 (40.20%), Postives = 59/102 (57.84%), Query Frame = 3
Query: 591 TPGEALLKFLEYFGRRFDAGQFGISVGRG--PLGN--------PFLLSKA---VDPVTGMAVMDAHVVIEDPLD--RGQNVARSCFAFPQVQWLFAQCLSIL 851
T G+ L+ FL ++G+ FDA I VG P N PF+ +A +DP+TGM +D +V+ DPL+ G NVA+SCFA+ ++W+FAQC L
Sbjct: 2144 TAGKLLMHFLLFYGQYFDAQTTSIDVGGANHPDYNRYANHQLSPFMPRRAGGTIDPITGMYTVDP-IVVYDPLEGAEGNNVAKSCFAWSSIRWVFAQCYMTL 2244
BLAST of mRNA_D-mesarthrocarpus_Contig10586.1.1 vs. uniprot
Match: A0A1Z5J7N4_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J7N4_FISSO) HSP 1 Score: 63.2 bits (152), Expect = 2.160e-6 Identity = 41/105 (39.05%), Postives = 58/105 (55.24%), Query Frame = 3
Query: 588 TTPGEALLKFLEYFGRRFDAGQFGISVG---RGPLGN---------PFLLSKA---VDPVTGMAVMDAHVVIEDPLDRGQN--VARSCFAFPQVQWLFAQCLSIL 851
TT G+ L+ FL Y+G+ FDA I + P N P++ +A +DPVTGM +D +VI DPL+ +N VAR CFA+ V+W+FAQ + L
Sbjct: 1396 TTAGKLLMHFLLYYGQHFDAQSTAIDISGKHERPFSNHVFPYAHISPYIQRRAHGTIDPVTGMLTVDP-IVIFDPLEGAENTNVARRCFAWLSVRWIFAQSYNTL 1499
BLAST of mRNA_D-mesarthrocarpus_Contig10586.1.1 vs. uniprot
Match: A0A1Z5JKZ4_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKZ4_FISSO) HSP 1 Score: 62.8 bits (151), Expect = 2.840e-6 Identity = 41/105 (39.05%), Postives = 58/105 (55.24%), Query Frame = 3
Query: 588 TTPGEALLKFLEYFGRRFDAGQFGISVG---RGPLGN---------PFLLSKA---VDPVTGMAVMDAHVVIEDPLDRGQN--VARSCFAFPQVQWLFAQCLSIL 851
TT G+ L+ FL Y+G+ FDA I + P N P++ +A +DPVTGM +D +VI DPL+ +N VAR CFA+ V+W+FAQ + L
Sbjct: 1424 TTAGKLLMHFLLYYGQHFDAQSTAIDISGKHERPYSNHVFPYAHISPYIQRRAHGTIDPVTGMLTVDP-IVIFDPLEGAENTNVARRCFAWLSVRWIFAQSYNTL 1527
BLAST of mRNA_D-mesarthrocarpus_Contig10586.1.1 vs. uniprot
Match: A0A7S2UCB2_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UCB2_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 2.610e-5 Identity = 43/124 (34.68%), Postives = 63/124 (50.81%), Query Frame = 3
Query: 597 GEALLKFLEYFGRRFDAGQFGISVG--RGPLGN------------PFLLSKA---VDPVTGMAVMDAHVVIEDPLD--RGQNVARSCFAFPQVQWLFAQCL----SILEIRGQEVAEYDPDADL 899
G+ L+ FL ++G+ FDA I V P N PF+ KA +DP+TG+ +D +V+ DPL NVARSCFA+ ++W+F+QC S++E G + A A L
Sbjct: 1950 GKLLMHFLLFYGQHFDAQSTSIDVSGTHHPDCNYFAPSELQDHLSPFISRKAGGTIDPITGVFTVDP-IVVYDPLAGCENNNVARSCFAWSSIRWVFSQCYMTLSSVVERGGDDSAISGASASL 2072
BLAST of mRNA_D-mesarthrocarpus_Contig10586.1.1 vs. uniprot
Match: B7FR04_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FR04_PHATC) HSP 1 Score: 57.8 bits (138), Expect = 9.760e-5 Identity = 38/103 (36.89%), Postives = 58/103 (56.31%), Query Frame = 3
Query: 588 TTPGEALLKFLEYFGRRFDAGQFGISVG----RGPLG------NPFLLSKA---VDPVTGMAVMDAHVVIEDPLDRGQN--VARSCFAFPQVQWLFAQCLSIL 851
TT G+ L+ FL ++G F+A + I V R G +PF+ A +DP+TGM +D V++ DPL+ +N VAR CFA+ ++W+FAQ + L
Sbjct: 1346 TTAGKLLMHFLLFYGHHFEAQKTAIDVSGTHARDITGRYLSYFSPFIPRGALGSIDPMTGMLTVDP-VIVYDPLEGAENNNVARRCFAWNSIRWIFAQSYATL 1447 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10586.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10586.1.1 >prot_D-mesarthrocarpus_Contig10586.1.1 ID=prot_D-mesarthrocarpus_Contig10586.1.1|Name=mRNA_D-mesarthrocarpus_Contig10586.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=231bp MHPGESYMPNGVCLSRGPSAENVAHLVHVPQSPPPPSPMVQRSPTHVSPTback to top mRNA from alignment at D-mesarthrocarpus_Contig10586:112..3289+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10586.1.1 ID=mRNA_D-mesarthrocarpus_Contig10586.1.1|Name=mRNA_D-mesarthrocarpus_Contig10586.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3178bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10586:112..3289+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10586:112..3289+ >mRNA_D-mesarthrocarpus_Contig10586.1.1 ID=mRNA_D-mesarthrocarpus_Contig10586.1.1|Name=mRNA_D-mesarthrocarpus_Contig10586.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=693bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10586:112..3289+ (Discosporangium mesarthrocarpum MT17_79)back to top |