mRNA_D-mesarthrocarpus_Contig10585.5.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10585.5.1
Unique NamemRNA_D-mesarthrocarpus_Contig10585.5.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10585.5.1 vs. uniprot
Match: D7FKJ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKJ5_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 1.930e-8
Identity = 27/32 (84.38%), Postives = 29/32 (90.62%), Query Frame = 1
Query:   13 VVAYLLSGKRVVGDALLYCMGRFGNTDSLNIE 108
            VVA+LLSGKRV GDALLY MGR GNTDSLN+E
Sbjct:  311 VVAHLLSGKRVKGDALLYAMGRLGNTDSLNLE 342          
BLAST of mRNA_D-mesarthrocarpus_Contig10585.5.1 vs. uniprot
Match: A0A835ZER9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZER9_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 8.250e-7
Identity = 24/33 (72.73%), Postives = 30/33 (90.91%), Query Frame = 1
Query:    7 GQVVAYLLSGKRVVGDALLYCMGRFGNTDSLNI 105
            G+VVA+L SGK+VVGDA+LY MGR GNTDSL++
Sbjct:  339 GRVVAHLSSGKKVVGDAMLYAMGRQGNTDSLSL 371          
BLAST of mRNA_D-mesarthrocarpus_Contig10585.5.1 vs. uniprot
Match: A0A8K1C723_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C723_PYTOL)

HSP 1 Score: 51.2 bits (121), Expect = 2.110e-6
Identity = 22/36 (61.11%), Postives = 28/36 (77.78%), Query Frame = 1
Query:    1 DEGQVVAYLLSGKRVVGDALLYCMGRFGNTDSLNIE 108
            D G+V+  L SGK ++GD LLY +GR GNTDSLN+E
Sbjct:  312 DNGEVIVKLNSGKTIIGDGLLYTLGRQGNTDSLNLE 347          
BLAST of mRNA_D-mesarthrocarpus_Contig10585.5.1 vs. uniprot
Match: D7FHH4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH4_ECTSI)

HSP 1 Score: 50.8 bits (120), Expect = 2.890e-6
Identity = 23/32 (71.88%), Postives = 29/32 (90.62%), Query Frame = 1
Query:   10 QVVAYLLSGKRVVGDALLYCMGRFGNTDSLNI 105
            +V+A+L SGKRVVGDALLY MGR GNTDS+++
Sbjct:  263 KVIAHLASGKRVVGDALLYTMGRQGNTDSMDL 294          
BLAST of mRNA_D-mesarthrocarpus_Contig10585.5.1 vs. uniprot
Match: C5BII9_TERTT (Soluble pyridine nucleotide transhydrogenase n=4 Tax=Teredinibacter turnerae TaxID=2426 RepID=C5BII9_TERTT)

HSP 1 Score: 49.7 bits (117), Expect = 7.410e-6
Identity = 23/36 (63.89%), Postives = 27/36 (75.00%), Query Frame = 1
Query:    1 DEGQVVAYLLSGKRVVGDALLYCMGRFGNTDSLNIE 108
            D+  V  YL SGKR+  DALL+C GR GNTDSLN+E
Sbjct:  245 DDHGVTLYLKSGKRIRADALLWCNGRTGNTDSLNLE 280          
BLAST of mRNA_D-mesarthrocarpus_Contig10585.5.1 vs. uniprot
Match: A0A521K4S3_9BACT (Si-specific NAD(P)(+) transhydrogenase n=1 Tax=Nitrospirae bacterium TaxID=2026887 RepID=A0A521K4S3_9BACT)

HSP 1 Score: 48.5 bits (114), Expect = 1.900e-5
Identity = 22/35 (62.86%), Postives = 26/35 (74.29%), Query Frame = 1
Query:    1 DEGQVVAYLLSGKRVVGDALLYCMGRFGNTDSLNI 105
            + G+VVA L SGK V+ D LLYCMGR  NTD LN+
Sbjct:  245 ERGRVVATLKSGKTVITDMLLYCMGRMANTDELNL 279          
BLAST of mRNA_D-mesarthrocarpus_Contig10585.5.1 vs. uniprot
Match: A0A2V9APJ0_9BACT (Si-specific NAD(P)(+) transhydrogenase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9APJ0_9BACT)

HSP 1 Score: 48.1 bits (113), Expect = 2.600e-5
Identity = 21/35 (60.00%), Postives = 27/35 (77.14%), Query Frame = 1
Query:    4 EGQVVAYLLSGKRVVGDALLYCMGRFGNTDSLNIE 108
            +G+V A L+S KRV+GDALLY +GR GN D LN+ 
Sbjct:  245 DGRVAAMLVSNKRVIGDALLYAVGRQGNVDELNLS 279          
BLAST of mRNA_D-mesarthrocarpus_Contig10585.5.1 vs. uniprot
Match: UPI0006738B32 (Si-specific NAD(P)(+) transhydrogenase n=2 Tax=Gilvimarinus TaxID=940550 RepID=UPI0006738B32)

HSP 1 Score: 47.8 bits (112), Expect = 3.550e-5
Identity = 21/32 (65.62%), Postives = 25/32 (78.12%), Query Frame = 1
Query:   13 VVAYLLSGKRVVGDALLYCMGRFGNTDSLNIE 108
            V+ YL SGKR+  DALL+C GR GNTD LN+E
Sbjct:  249 VILYLESGKRIKADALLWCNGRSGNTDQLNLE 280          
BLAST of mRNA_D-mesarthrocarpus_Contig10585.5.1 vs. uniprot
Match: UPI00037C04B7 (Si-specific NAD(P)(+) transhydrogenase n=1 Tax=Gilvimarinus chinensis TaxID=396005 RepID=UPI00037C04B7)

HSP 1 Score: 47.8 bits (112), Expect = 3.550e-5
Identity = 21/36 (58.33%), Postives = 26/36 (72.22%), Query Frame = 1
Query:    1 DEGQVVAYLLSGKRVVGDALLYCMGRFGNTDSLNIE 108
            +E  V  YL SGKR+  DA+L+C GR GNTD LN+E
Sbjct:  246 NERGVTVYLESGKRITADAILWCNGRSGNTDKLNLE 281          
BLAST of mRNA_D-mesarthrocarpus_Contig10585.5.1 vs. uniprot
Match: UPI001671EFE5 (Si-specific NAD(P)(+) transhydrogenase n=1 Tax=Halioglobus pacificus TaxID=930806 RepID=UPI001671EFE5)

HSP 1 Score: 47.8 bits (112), Expect = 3.550e-5
Identity = 23/36 (63.89%), Postives = 29/36 (80.56%), Query Frame = 1
Query:    1 DEGQVVAYLLSGKRVVGDALLYCMGRFGNTDSLNIE 108
            D+G VV YL SGKR+  DALL+C GR GNTD+LN++
Sbjct:  246 DDG-VVLYLKSGKRLKSDALLWCNGRTGNTDTLNLQ 280          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10585.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D7FKJ5_ECTSI1.930e-884.38Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZER9_9STRA8.250e-772.73Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8K1C723_PYTOL2.110e-661.11Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
D7FHH4_ECTSI2.890e-671.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
C5BII9_TERTT7.410e-663.89Soluble pyridine nucleotide transhydrogenase n=4 T... [more]
A0A521K4S3_9BACT1.900e-562.86Si-specific NAD(P)(+) transhydrogenase n=1 Tax=Nit... [more]
A0A2V9APJ0_9BACT2.600e-560.00Si-specific NAD(P)(+) transhydrogenase n=1 Tax=Aci... [more]
UPI0006738B323.550e-565.63Si-specific NAD(P)(+) transhydrogenase n=2 Tax=Gil... [more]
UPI00037C04B73.550e-558.33Si-specific NAD(P)(+) transhydrogenase n=1 Tax=Gil... [more]
UPI001671EFE53.550e-563.89Si-specific NAD(P)(+) transhydrogenase n=1 Tax=Hal... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10585contigD-mesarthrocarpus_Contig10585:3602..3709 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FKJ5
PFAMsPyr_redox_2,Pyr_redox_dim
Model size108
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Evalue3.16e-09
EggNOG OGsCOG1249@1|root,KOG1335@2759|Eukaryota
Descriptiondihydrolipoyl dehydrogenase activity
Cds size108
COG categoryC
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789194.0367794-CDS-D-mesarthrocarpus_Contig10585:3601..37091680789194.0367794-CDS-D-mesarthrocarpus_Contig10585:3601..3709Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10585 3602..3709 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10585.5.1prot_D-mesarthrocarpus_Contig10585.5.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10585 3602..3709 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10585.5.1

>prot_D-mesarthrocarpus_Contig10585.5.1 ID=prot_D-mesarthrocarpus_Contig10585.5.1|Name=mRNA_D-mesarthrocarpus_Contig10585.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=36bp
DEGQVVAYLLSGKRVVGDALLYCMGRFGNTDSLNIE
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mRNA from alignment at D-mesarthrocarpus_Contig10585:3602..3709-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10585.5.1 ID=mRNA_D-mesarthrocarpus_Contig10585.5.1|Name=mRNA_D-mesarthrocarpus_Contig10585.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=108bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10585:3602..3709- (Discosporangium mesarthrocarpum MT17_79)
GACGAGGGTCAGGTGGTTGCCTATCTGCTATCAGGGAAGCGCGTGGTTGG TGATGCCCTGCTCTACTGCATGGGGAGGTTCGGGAACACAGATTCTCTCA ACATCGAG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10585:3602..3709-

>mRNA_D-mesarthrocarpus_Contig10585.5.1 ID=mRNA_D-mesarthrocarpus_Contig10585.5.1|Name=mRNA_D-mesarthrocarpus_Contig10585.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=108bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10585:3602..3709- (Discosporangium mesarthrocarpum MT17_79)
GACGAGGGTCAGGTGGTTGCCTATCTGCTATCAGGGAAGCGCGTGGTTGG
TGATGCCCTGCTCTACTGCATGGGGAGGTTCGGGAACACAGATTCTCTCA
ACATCGAG
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