mRNA_D-mesarthrocarpus_Contig1058.5.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig1058.5.1
Unique NamemRNA_D-mesarthrocarpus_Contig1058.5.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig1058.5.1 vs. uniprot
Match: D7FXN4_ECTSI (Sar1A, Ras superfamily GTPase n=4 Tax=PX clade TaxID=569578 RepID=D7FXN4_ECTSI)

HSP 1 Score: 201 bits (512), Expect = 2.310e-64
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1 
Query:    1 GFYHKSAKILFLGLDNAGKTTLLHMLKENRVQVHQPTLHPNQDELIVGKVRFKTFDLGGHETARKLWKDYFTTVDGVVFLVDALDRQRFPEAKKELD 291
            GFYHKSAKILFLGLDNAGKTTLLHMLKENRVQVHQPTLHPNQDELIVGKVRFKTFDLGGHETARKLWKDYFTTVDGVVFLVDALDRQRFPEAKKELD
Sbjct:   15 GFYHKSAKILFLGLDNAGKTTLLHMLKENRVQVHQPTLHPNQDELIVGKVRFKTFDLGGHETARKLWKDYFTTVDGVVFLVDALDRQRFPEAKKELD 111
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BLAST of mRNA_D-mesarthrocarpus_Contig1058.5.1 vs. uniprot
Match: A0A7S2V1B9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1B9_9STRA)

HSP 1 Score: 196 bits (497), Expect = 4.580e-62
Identity = 93/97 (95.88%), Postives = 96/97 (98.97%), Query Frame = 1 
Query:    1 GFYHKSAKILFLGLDNAGKTTLLHMLKENRVQVHQPTLHPNQDELIVGKVRFKTFDLGGHETARKLWKDYFTTVDGVVFLVDALDRQRFPEAKKELD 291
            G YHKSAKILFLGLDNAGKTTLLHMLKENRVQVH+PTLHPNQDELIVGKVRFKTFDLGGHETARKLW+DYFTTVDGVVFLVDALDR+RFPEAKKELD
Sbjct:   15 GLYHKSAKILFLGLDNAGKTTLLHMLKENRVQVHEPTLHPNQDELIVGKVRFKTFDLGGHETARKLWRDYFTTVDGVVFLVDALDRERFPEAKKELD 111
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BLAST of mRNA_D-mesarthrocarpus_Contig1058.5.1 vs. uniprot
Match: K8YVP7_NANGC (GTP-binding protein SAR1 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YVP7_NANGC)

HSP 1 Score: 187 bits (475), Expect = 1.390e-58
Identity = 86/97 (88.66%), Postives = 94/97 (96.91%), Query Frame = 1 
Query:    1 GFYHKSAKILFLGLDNAGKTTLLHMLKENRVQVHQPTLHPNQDELIVGKVRFKTFDLGGHETARKLWKDYFTTVDGVVFLVDALDRQRFPEAKKELD 291
            G YHKSAKILFLGLDNAGKTTLLHMLKENRVQVHQPT+HPN DELI+GK+RFKTFDLGGHETAR+LWKDY TTVDGVVF+VDALD++RFPEAK+ELD
Sbjct:   25 GLYHKSAKILFLGLDNAGKTTLLHMLKENRVQVHQPTIHPNTDELIIGKIRFKTFDLGGHETARRLWKDYLTTVDGVVFIVDALDQERFPEAKRELD 121
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BLAST of mRNA_D-mesarthrocarpus_Contig1058.5.1 vs. uniprot
Match: A0A7S1U8E4_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8E4_9STRA)

HSP 1 Score: 183 bits (465), Expect = 7.560e-57
Identity = 85/97 (87.63%), Postives = 91/97 (93.81%), Query Frame = 1 
Query:    1 GFYHKSAKILFLGLDNAGKTTLLHMLKENRVQVHQPTLHPNQDELIVGKVRFKTFDLGGHETARKLWKDYFTTVDGVVFLVDALDRQRFPEAKKELD 291
            G YHKSAKILFLGLDNAGKTTLLHMLKENRVQVH+PTLHPNQDELIV  +RFKTFDLGGHETAR+LW+DYF TVDG+VFLVDA DR RFPEAK+ELD
Sbjct:   42 GLYHKSAKILFLGLDNAGKTTLLHMLKENRVQVHEPTLHPNQDELIVNNIRFKTFDLGGHETARRLWQDYFATVDGIVFLVDAFDRDRFPEAKEELD 138
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BLAST of mRNA_D-mesarthrocarpus_Contig1058.5.1 vs. uniprot
Match: B7FXX2_PHATC (Predicted protein n=7 Tax=Bacillariophyta TaxID=2836 RepID=B7FXX2_PHATC)

HSP 1 Score: 182 bits (461), Expect = 1.370e-56
Identity = 84/97 (86.60%), Postives = 92/97 (94.85%), Query Frame = 1 
Query:    1 GFYHKSAKILFLGLDNAGKTTLLHMLKENRVQVHQPTLHPNQDELIVGKVRFKTFDLGGHETARKLWKDYFTTVDGVVFLVDALDRQRFPEAKKELD 291
            G YHK+AKILFLGLDNAGKTTLLHMLKENRVQVH PTLHPN DELI+G ++FKTFDLGGHETAR+LW+DYFTTVDGVV+LVDA+DR RFPEAKKELD
Sbjct:   15 GLYHKNAKILFLGLDNAGKTTLLHMLKENRVQVHVPTLHPNTDELIIGNIKFKTFDLGGHETARRLWQDYFTTVDGVVYLVDAIDRGRFPEAKKELD 111
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BLAST of mRNA_D-mesarthrocarpus_Contig1058.5.1 vs. uniprot
Match: A0A7S2LHQ1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LHQ1_9STRA)

HSP 1 Score: 182 bits (461), Expect = 2.630e-56
Identity = 84/97 (86.60%), Postives = 93/97 (95.88%), Query Frame = 1 
Query:    1 GFYHKSAKILFLGLDNAGKTTLLHMLKENRVQVHQPTLHPNQDELIVGKVRFKTFDLGGHETARKLWKDYFTTVDGVVFLVDALDRQRFPEAKKELD 291
            G +HK+AKILFLGLDNAGKTTLLHMLKENRVQVH PTLHPN DELI+GK++FKTFDLGGHETAR+LW+DYFTTVDGVV+LVDA+DR RFPEAKKELD
Sbjct:   35 GLHHKNAKILFLGLDNAGKTTLLHMLKENRVQVHVPTLHPNTDELIIGKIKFKTFDLGGHETARRLWQDYFTTVDGVVYLVDAIDRGRFPEAKKELD 131
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BLAST of mRNA_D-mesarthrocarpus_Contig1058.5.1 vs. uniprot
Match: A0A7R9ZN47_9STRA (Hypothetical protein n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZN47_9STRA)

HSP 1 Score: 182 bits (461), Expect = 4.550e-56
Identity = 84/97 (86.60%), Postives = 92/97 (94.85%), Query Frame = 1 
Query:    1 GFYHKSAKILFLGLDNAGKTTLLHMLKENRVQVHQPTLHPNQDELIVGKVRFKTFDLGGHETARKLWKDYFTTVDGVVFLVDALDRQRFPEAKKELD 291
            G YHK+AKILFLGLDNAGKTTLLHMLKENRVQVH PTLHPN DELI+G ++FKTFDLGGHETAR+LW+DYFTTVDGVV+LVDA+DR RFPEAKKELD
Sbjct:   55 GLYHKNAKILFLGLDNAGKTTLLHMLKENRVQVHVPTLHPNTDELIIGNIKFKTFDLGGHETARRLWQDYFTTVDGVVYLVDAIDRGRFPEAKKELD 151
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BLAST of mRNA_D-mesarthrocarpus_Contig1058.5.1 vs. uniprot
Match: A0A1E7FLB6_9STRA (Small GTP-binding protein sar1 n=3 Tax=Bacillariaceae TaxID=33852 RepID=A0A1E7FLB6_9STRA)

HSP 1 Score: 179 bits (454), Expect = 1.640e-55
Identity = 82/97 (84.54%), Postives = 91/97 (93.81%), Query Frame = 1 
Query:    1 GFYHKSAKILFLGLDNAGKTTLLHMLKENRVQVHQPTLHPNQDELIVGKVRFKTFDLGGHETARKLWKDYFTTVDGVVFLVDALDRQRFPEAKKELD 291
            G YHK+AKILFLGLDNAGKTTLLHMLKENRVQVH PTLHPN DELI+G ++FKTFDLGGHETAR+LW DYFTTVDGVV++VD++DR RFPEAKKELD
Sbjct:   17 GLYHKNAKILFLGLDNAGKTTLLHMLKENRVQVHVPTLHPNTDELIIGNIKFKTFDLGGHETARRLWADYFTTVDGVVYIVDSIDRGRFPEAKKELD 113
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BLAST of mRNA_D-mesarthrocarpus_Contig1058.5.1 vs. uniprot
Match: F0YAQ6_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAQ6_AURAN)

HSP 1 Score: 179 bits (454), Expect = 1.690e-55
Identity = 83/92 (90.22%), Postives = 90/92 (97.83%), Query Frame = 1 
Query:   16 SAKILFLGLDNAGKTTLLHMLKENRVQVHQPTLHPNQDELIVGKVRFKTFDLGGHETARKLWKDYFTTVDGVVFLVDALDRQRFPEAKKELD 291
            SAKILFLGLDNAGKTTLLHMLKENRVQ+HQPTLHPNQDELI+G +RFKTFDLGGHETAR+LWKDYFTTVDGVV++VDALDR RFPEAK+ELD
Sbjct:   20 SAKILFLGLDNAGKTTLLHMLKENRVQIHQPTLHPNQDELIIGNIRFKTFDLGGHETARRLWKDYFTTVDGVVYMVDALDRGRFPEAKRELD 111
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BLAST of mRNA_D-mesarthrocarpus_Contig1058.5.1 vs. uniprot
Match: B8BUA4_THAPS (Arf-type small G protein n=5 Tax=Bacillariophyta TaxID=2836 RepID=B8BUA4_THAPS)

HSP 1 Score: 177 bits (448), Expect = 1.300e-54
Identity = 82/97 (84.54%), Postives = 91/97 (93.81%), Query Frame = 1 
Query:    1 GFYHKSAKILFLGLDNAGKTTLLHMLKENRVQVHQPTLHPNQDELIVGKVRFKTFDLGGHETARKLWKDYFTTVDGVVFLVDALDRQRFPEAKKELD 291
            G YHK+AKILFLGLDNAGKTTLLHMLKENRVQ H PTLHPN DELIVG+++ KTFDLGGHETAR+LW+DYFTTVDGVV+LVDA+DR RFPEAK+ELD
Sbjct:   15 GLYHKNAKILFLGLDNAGKTTLLHMLKENRVQAHVPTLHPNTDELIVGQLKLKTFDLGGHETARRLWQDYFTTVDGVVYLVDAIDRGRFPEAKRELD 111
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1058.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXN4_ECTSI2.310e-64100.00Sar1A, Ras superfamily GTPase n=4 Tax=PX clade Tax... [more]
A0A7S2V1B9_9STRA4.580e-6295.88Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
K8YVP7_NANGC1.390e-5888.66GTP-binding protein SAR1 n=3 Tax=Monodopsidaceae T... [more]
A0A7S1U8E4_9STRA7.560e-5787.63Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
B7FXX2_PHATC1.370e-5686.60Predicted protein n=7 Tax=Bacillariophyta TaxID=28... [more]
A0A7S2LHQ1_9STRA2.630e-5686.60Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7R9ZN47_9STRA4.550e-5686.60Hypothetical protein n=2 Tax=Craspedostauros austr... [more]
A0A1E7FLB6_9STRA1.640e-5584.54Small GTP-binding protein sar1 n=3 Tax=Bacillariac... [more]
F0YAQ6_AURAN1.690e-5590.22Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
B8BUA4_THAPS1.300e-5484.54Arf-type small G protein n=5 Tax=Bacillariophyta T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1058contigD-mesarthrocarpus_Contig1058:20989..21965 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FXN4
PFAMsArf
Model size303
Max annot lvl2759|Eukaryota
KEGG koko:K07953
KEGG Pathwayko04141,ko05134,map04141,map05134
KEGG ModuleM00404
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005798,GO:0006810,GO:0006888,GO:0006900,GO:0006996,GO:0008150,GO:0009987,GO:0012505,GO:0012506,GO:0012507,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0022607,GO:0030117,GO:0030120,GO:0030127,GO:0030133,GO:0030134,GO:0030135,GO:0030658,GO:0030659,GO:0030660,GO:0030662,GO:0031090,GO:0031410,GO:0031982,GO:0032991,GO:0034622,GO:0035459,GO:0043226,GO:0043227,GO:0043229,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0046907,GO:0048193,GO:0048194,GO:0048475,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051668,GO:0061024,GO:0065003,GO:0071840,GO:0090110,GO:0090114,GO:0097708,GO:0098588,GO:0098796,GO:0098805
Exons2
Evalue3.79e-65
EggNOG OGsKOG0077@1|root,KOG0077@2759|Eukaryota
Descriptionintracellular protein transport
Cds size303
COG categoryU
BRITEko00000,ko00001,ko00002,ko01000,ko04031,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789193.7566817-CDS-D-mesarthrocarpus_Contig1058:20988..211351680789193.7566817-CDS-D-mesarthrocarpus_Contig1058:20988..21135Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1058 20989..21135 +
1680789193.7701266-CDS-D-mesarthrocarpus_Contig1058:21809..219651680789193.7701266-CDS-D-mesarthrocarpus_Contig1058:21809..21965Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1058 21810..21965 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1058.5.1prot_D-mesarthrocarpus_Contig1058.5.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig1058 20989..21965 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig1058.5.1

>prot_D-mesarthrocarpus_Contig1058.5.1 ID=prot_D-mesarthrocarpus_Contig1058.5.1|Name=mRNA_D-mesarthrocarpus_Contig1058.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=101bp
GFYHKSAKILFLGLDNAGKTTLLHMLKENRVQVHQPTLHPNQDELIVGKV
RFKTFDLGGHETARKLWKDYFTTVDGVVFLVDALDRQRFPEAKKELDVSD
*
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mRNA from alignment at D-mesarthrocarpus_Contig1058:20989..21965+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig1058.5.1 ID=mRNA_D-mesarthrocarpus_Contig1058.5.1|Name=mRNA_D-mesarthrocarpus_Contig1058.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=977bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1058:20989..21965+ (Discosporangium mesarthrocarpum MT17_79)
GGTTTTTACCACAAGAGTGCAAAGATCCTCTTCTTGGGCCTGGACAATGC
AGGAAAGACAACGCTACTGCACATGCTCAAGGAGAACCGGGTGCAAGTGC
ACCAGCCCACACTGCACCCCAACCAGGATGAGCTGATTGTGGGGAAGGTA
TGTCTTGTCCAATGAAGTTGACTAAAGGTTACGTTTTTGTGTGTACTTAT
CCTGTGGAGGTATTTTTTTTTCATTTTGCCCTTGTTCACCGTATCAGAAC
TTTTTATAATGGAGGGGAGTAATTTTTGCTTGAAATTTTGTTAGAGCTAC
TACATAGTATACTGTATTTTCCTTTTGAGTATGTACTACTACAAAGTATA
CTGAAAAATACACTTCTAGTGTCTTAAATTGTTGATCATTATTGGGTAGC
AGATGAACGTGGAGAAACCTTGCTATACCTGAAACTCAAAATGCCACTTG
AAAGAAAAAACACAAGGAAACAGTGAAGAGCAGAAGATGCAAAAATAGCA
GAAACACTCGAAGCCCACAAGCCAGGCGATCCCTAGAATGCGGGTAGGGA
TGGGTCAGGATTCTCTCCACAAGGGCGGAGATCTGTGGGGACAGCAGGAG
TTTTTGCAAAGTCTGTTCCATGAAAGAAGAGGGTGCCAAATTTGAGACTG
TTGGGTGGCTAATTCCAAAGAGAGACTAGAAAGGGACATATGTTTTGCCC
TCCCTTCATGTACCACACCTGCTCTCTACAGTCCTTGATATTGTGTGTAC
CAGGGACCTTTCTTGTCTTTTTTTCTTTGTAACCCCCACCCCTGTGATGT
ATGATTGGATCCTTGTTCCAGGTCCGCTTCAAAACTTTTGACCTTGGTGG
ACATGAGACGGCAAGGAAGCTGTGGAAGGACTATTTCACCACGGTGGATG
GGGTGGTTTTCCTGGTGGATGCTCTGGACAGGCAGCGTTTCCCAGAGGCC
AAGAAGGAGCTGGATGTGAGTGACTGA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1058:20989..21965+

>mRNA_D-mesarthrocarpus_Contig1058.5.1 ID=mRNA_D-mesarthrocarpus_Contig1058.5.1|Name=mRNA_D-mesarthrocarpus_Contig1058.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=303bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1058:20989..21965+ (Discosporangium mesarthrocarpum MT17_79)
GGTTTTTACCACAAGAGTGCAAAGATCCTCTTCTTGGGCCTGGACAATGC
AGGAAAGACAACGCTACTGCACATGCTCAAGGAGAACCGGGTGCAAGTGC
ACCAGCCCACACTGCACCCCAACCAGGATGAGCTGATTGTGGGGAAGGTC
CGCTTCAAAACTTTTGACCTTGGTGGACATGAGACGGCAAGGAAGCTGTG
GAAGGACTATTTCACCACGGTGGATGGGGTGGTTTTCCTGGTGGATGCTC
TGGACAGGCAGCGTTTCCCAGAGGCCAAGAAGGAGCTGGATGTGAGTGAC
TGA
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