mRNA_D-mesarthrocarpus_Contig10579.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10579.1.1 vs. uniprot
Match: A0A6H5JIK9_9PHAE (PAP_fibrillin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIK9_9PHAE) HSP 1 Score: 240 bits (613), Expect = 2.890e-76 Identity = 126/215 (58.60%), Postives = 157/215 (73.02%), Query Frame = 1
Query: 1 SSPFFQMVEAGYDNKEKSELFFKLHQLQTGSWGATSIGRVTQTFDL----PEVVDEGTAVTGDSTNATATAGEEMEKTDL-----EPSMPSVINGSLVSEVDLIVLPLTSVPLVGFWKLLPTFGGCVATNAAVTLTGEANSVLEIEVETTVLKAVEDVPLLPLAGKFFEGKSFPTADVVKKILGKVPIASQTVRFVDEDLRIMGDKGGQIYIYSR 618
+SPFFQMVEAGYD+ EKS LFFKLHQLQTGSWGA+ IGRVTQT DL P ++ A + A A A +E +D + + S +GSL SEVDLI+LPLTSVPLVGFWKLLPTFGGC+AT A +L G+ N V+++ VE+T LKAVEDVPLLP+AG FEG FPT +V KK++G VP+ QTV ++D+ LR+M DK G++YIY+R
Sbjct: 90 ASPFFQMVEAGYDDPEKSNLFFKLHQLQTGSWGASKIGRVTQTLDLIDSVPPSIEGRDATATPAAEAEAAAAGAVEGSDKAGVVEDNTDMSGGSGSLESEVDLIILPLTSVPLVGFWKLLPTFGGCIATKAKCSLAGDNNEVVQLIVESTKLKAVEDVPLLPIAGPLFEGMEFPTGEVTKKVMGNVPVTKQTVVYIDDTLRVMEDKAGELYIYAR 304
BLAST of mRNA_D-mesarthrocarpus_Contig10579.1.1 vs. uniprot
Match: A0A0G4EA07_VITBC (PAP_fibrillin domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EA07_VITBC) HSP 1 Score: 144 bits (364), Expect = 1.990e-38 Identity = 85/207 (41.06%), Postives = 120/207 (57.97%), Query Frame = 1
Query: 1 SSPFFQMVEAGYDNKEKSELFFKLHQLQTGSWGATSIGRVTQTFDLPEVVDEGTAVTGDSTNATATAGEEMEKTDLEPSMPSVINGSLVSEVDLIVLPLTSVPLVGFWKLLPTFGGCVATNAAVTLTGEANSVLEIEVETTVLKAVEDVPLLPLAGKFF-EGKSFPTADVVKKILGKVPIASQTVRFVDEDLRIMGDKGGQIYIYSR 618
SSPFF ++A YD+ +K+ LFFKLH+LQT SWG + I +V QT PE N+T +G L S+ ++ VLP T VPLVG+WKLLPTFGG V + A +++G+AN L++ V+ T +KA ED+PL+PL G+F E ++V K++ G VP A T FVD +RI D G++++Y R
Sbjct: 121 SSPFFLSIQASYDDSKKASLFFKLHELQTRSWGFSEIAQVGQTLLFPEA------------NST--------------------DGRLRSDFNIKVLPSTVVPLVGWWKLLPTFGGNVRSIANASISGDANQHLDLTVDLTKVKASEDLPLMPLLGQFLAEQTGIRVSNVWKRLRGSVPTARVTHVFVDSGMRIAKDSQGEVFVYVR 295
BLAST of mRNA_D-mesarthrocarpus_Contig10579.1.1 vs. uniprot
Match: A0A812Z459_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812Z459_9DINO) HSP 1 Score: 122 bits (305), Expect = 3.970e-30 Identity = 77/210 (36.67%), Postives = 112/210 (53.33%), Query Frame = 1
Query: 1 SSPFFQMVEAGYDNKEKSELFFKLHQLQTGSWGATSIGRVTQTFDLPEVVDEGTAVTGDSTNATATAGEEMEKTDLEPSMPSVINGSLVSEVDLIVLPLTSVPLVGFWKLLPTFGGCVATNAAVTLTGEANSVLEIEVETTVLKAVEDVPLLPLAGKFFEGKSFPTADVVKKIL----GKVPIASQTVRFVDEDLRIMGDKGGQIYIYSR 618
SSPFF V+ + EKSELFFKLH+LQ SWGA+ +GRV Q + E G L SE D +L +T +P++G+WKLLPTFGGCV T + VT+ A + L++EV+ T K +VP LP F GK P + V ++L G+ P S ++++D+D+RI+ D+ G++++Y R
Sbjct: 134 SSPFFLAVQEAFGEAEKSELFFKLHELQVMSWGASKVGRVAQFINATE-------------------------------------GLLYSEFDTSLLSMTVIPILGWWKLLPTFGGCVVTVSNVTM---AENRLDMEVQYTEAK---EVPGLPPLADFVMGKRAPV-NAVWQLLPWNGGRKPTCSVELKYLDDDMRIVADRDGEMFVYVR 299
BLAST of mRNA_D-mesarthrocarpus_Contig10579.1.1 vs. uniprot
Match: A0A7S1UDK1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UDK1_9STRA) HSP 1 Score: 121 bits (303), Expect = 9.180e-30 Identity = 77/209 (36.84%), Postives = 110/209 (52.63%), Query Frame = 1
Query: 1 SSPFFQMVEAGYDNKEKSELFFKLHQLQTGSWGATSIGRVTQTFDLPEVVDEGTAVTGDSTNATATAGEEMEKTDLEPSMPSVINGSLVSEVDLIVLPLTSVPLVGFWKLLPTFGGCVATNAAVTLTGEA-NSVLEIEVETTVLKAVEDVPLLPLAGKFFEGKSFPTADVVKKI-LGKVPI-ASQTVRFVDEDLRIMGDKGGQIYIYSR 618
SSPFF +E YDN+E S LFFKLH+LQT SWG +++GRV Q +D E M + SE D + LT++P+VGF+KLLPTFGGCV T + VT T + +E+EV+ T K V +P LP+ G P D+ +K+ K P + + ++D+D RI DK G++++Y+R
Sbjct: 139 SSPFFLAIEEAYDNEELSNLFFKLHELQTCSWGVSTVGRVAQVWDS------------------------------EAKM-------MYSEFDTSLFGLTTIPIVGFFKLLPTFGGCVRTESKVTSTEIGPDGRVEMEVDLTRAKEVPGLPPLPILGDRVYDIEVPVGDIWEKLPWNKGPAKCAVNIVYLDDDFRIAADKYGELFVYTR 310
BLAST of mRNA_D-mesarthrocarpus_Contig10579.1.1 vs. uniprot
Match: A0A7S0D7E6_MICPS (Hypothetical protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0D7E6_MICPS) HSP 1 Score: 119 bits (299), Expect = 3.090e-29 Identity = 73/214 (34.11%), Postives = 109/214 (50.93%), Query Frame = 1
Query: 1 SSPFFQMV-----EAGYDNKEKSELFFKLHQLQTGSWGATSIGRVTQTFDLPEVVDEGTAVTGDSTNATATAGEEMEKTDLEPSMPSVINGSLVSEVDLIVLPLTSVPLVGFWKLLPTFGGCVATNAAVTLTGEANSVLEIEVETTVLKAVEDVPLLPLAGKFFEGKSFPTADVVKKI---LGKVPIASQTVRFVDEDLRIMGDKGGQIYIYSR 618
SSPFF + EA + ++ SE+FF+LH+LQ SWGA+++GRV Q DLP NG + S D I+ LT +P+VG++KLLPTFGG + T A E + L + ++ T ++ E +P PL +F + +P V K + G+ P AS VR++DED RIM D+ G++++Y R
Sbjct: 124 SSPFFMAIQDAFGEAMFGERKSSEVFFRLHELQVKSWGASTVGRVAQRIDLP-------------------------------------NGLMESYFDTILFALTVIPIVGWFKLLPTFGGRIKTYADEVTLDEKSGKLSLVLDRTRVELAEGIPKPPLVLPWFLNRDYPVKFVWKLLPWNKGRDPAASTYVRYLDEDFRIMADRDGEVFVYCR 300
BLAST of mRNA_D-mesarthrocarpus_Contig10579.1.1 vs. uniprot
Match: A0A0G4H2E8_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4H2E8_9ALVE) HSP 1 Score: 116 bits (290), Expect = 7.670e-28 Identity = 73/212 (34.43%), Postives = 109/212 (51.42%), Query Frame = 1
Query: 1 SSPFFQMVEAGYDN---KEKSELFFKLHQLQTGSWGATSIGRVTQTFDLPEVVDEGTAVTGDSTNATATAGEEMEKTDLEPSMPSVINGSLVSEVDLIVLPLTSVPLVGFWKLLPTFGGCVATNAAVTLTGEANSVLEIEVETTVLKAVEDVPLLPLAGKFFEGKSFPTADVVKKI---LGKVPIASQTVRFVDEDLRIMGDKGGQIYIYSR 618
SSPFF ++ Y+ +K+ELFFKLH+LQT SWG + +GRV Q D N L SE D + LT +P++G++KLLPTFGGCV T + V L G + L++EV+ T + VE +P L G++ + P +V K++ G +P AS + F DE R++ D GG++++Y+R
Sbjct: 131 SSPFFLAIQDAYERVGAADKAELFFKLHELQTCSWGVSKVGRVAQYIDSA-------------------------------------NRLLYSEFDTSLFSLTVIPILGWFKLLPTFGGCVVTVSKVELNGNS---LDLEVDYTTFREVEGLPGL---GRWVWDRKIPVKEVWKRLPWNKGTIPKASVKLLFCDESFRVVEDSGGEVFVYTR 299
BLAST of mRNA_D-mesarthrocarpus_Contig10579.1.1 vs. uniprot
Match: A0A8J2X3D5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X3D5_9STRA) HSP 1 Score: 114 bits (286), Expect = 1.890e-27 Identity = 78/212 (36.79%), Postives = 105/212 (49.53%), Query Frame = 1
Query: 1 SSPFFQMVEAGYDN---KEKSELFFKLHQLQTGSWGATSIGRVTQTFDLPEVVDEGTAVTGDSTNATATAGEEMEKTDLEPSMPSVINGSLVSEVDLIVLPLTSVPLVGFWKLLPTFGGCVATNAAVTLTGEANSVLEIEVETTVLKAVEDVPLLPLAGKFFEGKSFPTADVVKKI---LGKVPIASQTVRFVDEDLRIMGDKGGQIYIYSR 618
SSPFF+ + Y N +K+ELFFKLH+LQT SWGA+ IGRV QT D PE N L SE D + LT++P++GFWKLLPTFGGCV T + + + A L +EVE T K VE + L G++ P V K + G P + ++D+D+RI D GQ ++Y+R
Sbjct: 123 SSPFFEAIYDSYANVGKPDKAELFFKLHELQTMSWGASKIGRVAQTID-PE------------------------------------NNMLYSEFDTQIFSLTAIPIIGFWKLLPTFGGCVVTASKMNINDNA---LNLEVEYTTAKPVEGLSGL---GEWIWDVKVPVGAVWKLLPWNRGLPPTCAVEQVYLDDDVRIAKDTSGQYFVYAR 291
BLAST of mRNA_D-mesarthrocarpus_Contig10579.1.1 vs. uniprot
Match: A0A4D9CZF7_9STRA (PAP_fibrillin domain-containing protein n=2 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZF7_9STRA) HSP 1 Score: 114 bits (285), Expect = 2.070e-27 Identity = 76/208 (36.54%), Postives = 104/208 (50.00%), Query Frame = 1
Query: 1 SSPFFQMVEAGYDNKEKSELFFKLHQLQTGSWGATSIGRVTQTFDLPEVVDEGTAVTGDSTNATATAGEEMEKTDLEPSMPSVINGSLVSEVDLIVLPLTSVPLVGFWKLLPTFGGCVATNA-AVTLTGEANSV---LEIEVETTVLKAVEDVPLLPLAGKFFEGKSFPTADVVKKI----LGKVPIASQTVRFVDEDLRIMGDKGGQ 600
SSPFFQ +E Y + KSELFFKLH+LQT SWGA+ IGRV QT DL +L+S D ++ PLT++PL+G++KLLPTFGG V + A +T++ A LE V T K + + +PL G + E K FPT + + G P V ++DED RI+ + GG+
Sbjct: 89 SSPFFQAIERAYADPTKSELFFKLHELQTCSWGASQIGRVAQTIDLQAQ-------------------------------------TLLSSFDTVLFPLTTIPLIGWFKLLPTFGGRVLSLADGLTVSESAQGTALRLEYAVAKTSFKRLAGLKTMPLLGAWLENKQFPTKEAWNLLPWNWSGSGPRCLVEVVYLDEDFRIVREGGGE 259
BLAST of mRNA_D-mesarthrocarpus_Contig10579.1.1 vs. uniprot
Match: A0A061RCL2_9CHLO (Pilus assembly protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RCL2_9CHLO) HSP 1 Score: 114 bits (286), Expect = 3.110e-27 Identity = 73/212 (34.43%), Postives = 105/212 (49.53%), Query Frame = 1
Query: 1 SSPFFQMVEAGYDNKEKSELFFKLHQLQTGSWGATSIGRVTQTFDLPEVVDEGTAVTGDSTNATATAGEEMEKTDLEPSMPSVINGSLVSEVDLIVLPLTSVPLVGFWKLLPTFGGCVATNAAVTLTGEANSVLEIEVETTVLKAVEDVP---LLPLAGKFFEGKSFPTADVVKKIL---GKVPIASQTVRFVDEDLRIMGDKGGQIYIYSR 618
SSPFF ++A + +KEKS LFFKLH LQ SWGA+++GRV Q D + SE D I+ LT VP+ G++KLLPTFGG V + A L++E++ T ++A +P LP+ G+ FP + V K + G+ P S TV++VD+ RIM D G++++YSR
Sbjct: 137 SSPFFMAIQAAFADKEKSALFFKLHDLQVKSWGASTVGRVAQNIDFE-------------------------------------SNQFRSEFDTIIFALTVVPIFGWFKLLPTFGGRVISYAEDLEFDIETGRLDMELKRTRVEAAPGIPNIKKLPVLGRALMDNDFPVSRVWKSLPWNGGRAPKCSVTVKYVDDTFRIMEDPDGELFVYSR 311
BLAST of mRNA_D-mesarthrocarpus_Contig10579.1.1 vs. uniprot
Match: W7T369_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T369_9STRA) HSP 1 Score: 113 bits (282), Expect = 1.830e-26 Identity = 75/208 (36.06%), Postives = 104/208 (50.00%), Query Frame = 1
Query: 1 SSPFFQMVEAGYDNKEKSELFFKLHQLQTGSWGATSIGRVTQTFDLPEVVDEGTAVTGDSTNATATAGEEMEKTDLEPSMPSVINGSLVSEVDLIVLPLTSVPLVGFWKLLPTFGGCV---ATNAAVTLTGEANSV-LEIEVETTVLKAVEDVPLLPLAGKFFEGKSFPTADVVKKI----LGKVPIASQTVRFVDEDLRIMGDKGGQ 600
SSPFFQ +E Y + KSELFFKLH+LQT SWGA+ IGRV QT DL +L+S D ++ PLT++PL+G++KLLPTFGG V A V+ + + ++ LE V T K + + +PL G + E K FPT + + G P V ++DED RI+ + GG+
Sbjct: 160 SSPFFQAIERAYADPTKSELFFKLHELQTCSWGASQIGRVAQTIDLQAQ-------------------------------------TLLSSFDTVLFPLTTIPLIGWFKLLPTFGGRVDSLADGLTVSESSQGTALRLEYAVAKTSFKRLAGLKTMPLLGAWLENKQFPTKEAWNLLPWNWSGPGPRCLVEVVYLDEDFRIVREGGGE 330 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10579.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10579.1.1 >prot_D-mesarthrocarpus_Contig10579.1.1 ID=prot_D-mesarthrocarpus_Contig10579.1.1|Name=mRNA_D-mesarthrocarpus_Contig10579.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=200bp MVEAGYDNKEKSELFFKLHQLQTGSWGATSIGRVTQTFDLPEVVDEGTAVback to top mRNA from alignment at D-mesarthrocarpus_Contig10579:612..4230- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10579.1.1 ID=mRNA_D-mesarthrocarpus_Contig10579.1.1|Name=mRNA_D-mesarthrocarpus_Contig10579.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3619bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10579:612..4230- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10579:612..4230- >mRNA_D-mesarthrocarpus_Contig10579.1.1 ID=mRNA_D-mesarthrocarpus_Contig10579.1.1|Name=mRNA_D-mesarthrocarpus_Contig10579.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=600bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10579:612..4230- (Discosporangium mesarthrocarpum MT17_79)back to top |