mRNA_D-mesarthrocarpus_Contig10576.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10576.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10576.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10576.1.1 vs. uniprot
Match: D7FHG7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG7_ECTSI)

HSP 1 Score: 310 bits (794), Expect = 4.840e-93
Identity = 161/218 (73.85%), Postives = 175/218 (80.28%), Query Frame = 1
Query:  172 EEYRSLRARLDVPSMGFGLLR-----GDCSRHPGNQQ--GNGQGRLSLRSRLCEDLSGWVHYVVEKERESFDAKWFAYQRCKAVVRSLWPRAQVNLYGSFVTGLSLPSSDLDLVICLPKVRMDTPADTPGALEGRNAIKETWQQELARSLGAERWVDSNSLKIISHTAVPVIKLTTHASIGLNYFNGLGHNGEGANRLVKGLVDGFPALRPLALLLKQ 804
            ++Y +LRARL+VPS+GFG LR     G    H   +   G GQG LSLRSRLCEDLS ++H V E+ER +FDAKW AYQRC+AVVR LWPRAQV  YGSFVTGLSLP SDLDLVICLPKVR D PADTPGALEGRNAIKETWQQELARSLG ERWVD+NSLKIISHTAVPVIKLTT        F G GHNG+ AN+LVK LVDGFPALRPLALLLKQ
Sbjct: 1617 DDYLALRARLEVPSLGFGSLRPPGQGGPAGGHKRGRSAGGGGQGGLSLRSRLCEDLSRFLHLVTERERRTFDAKWVAYQRCRAVVRGLWPRAQVKPYGSFVTGLSLPWSDLDLVICLPKVRRDAPADTPGALEGRNAIKETWQQELARSLGGERWVDNNSLKIISHTAVPVIKLTT--------FEGQGHNGQAANQLVKDLVDGFPALRPLALLLKQ 1826          
BLAST of mRNA_D-mesarthrocarpus_Contig10576.1.1 vs. uniprot
Match: A0A835ZHQ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHQ3_9STRA)

HSP 1 Score: 218 bits (556), Expect = 2.660e-65
Identity = 111/153 (72.55%), Postives = 124/153 (81.05%), Query Frame = 1
Query:  361 FDAKWFAYQRCKAVVRSLWPRAQVNLYGSFVTGLSLPSSDLDLVICLPKVRMDTPADTPGALEGRNAIKETWQQELARSLGAERWVDSNSLKIISHTAVPVIKLTT-----HASIGLNYFNGLGHNGEGANRLVKGLVDGFPALRPLALLLKQ 804
            FDAKW AY RC+AVVRSLWPRAQ NLYGSFVTGL LP SDLDLVI LPKVR D PA TPGALEGRNAIKETWQQELARSL A+ WV+ +S+KIISHTAVPVIKLTT     H  +    F G  HNG+ +NRLV GL++ +PALRPLA++LKQ
Sbjct:   19 FDAKWIAYHRCRAVVRSLWPRAQANLYGSFVTGLGLPWSDLDLVIWLPKVRKDAPAVTPGALEGRNAIKETWQQELARSLSAQPWVERDSIKIISHTAVPVIKLTTQFPPVHVDVS---FEGQWHNGQASNRLVLGLIEEYPALRPLAIVLKQ 168          
BLAST of mRNA_D-mesarthrocarpus_Contig10576.1.1 vs. uniprot
Match: A0A7S3XJC8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XJC8_HETAK)

HSP 1 Score: 171 bits (434), Expect = 2.220e-48
Identity = 91/163 (55.83%), Postives = 108/163 (66.26%), Query Frame = 1
Query:  208 PSMGFGLLR---GDCSRHPGNQQGNGQGRLSLRSRLCEDLSGWVHYVVEKERESFDAKWFAYQRCKAVVRSLWPRAQVNLYGSFVTGLSLPSSDLDLVICLPKVRMDTPADTPGALEGRNAIKETWQQELARSLGAERWVDSNSLKIISHTAVPVIKLTTHAS 687
            P +G  LL    G  +   G     G    +LRSRLCEDL   +  +  +E+   + K  A+ +CK+VVR LWPRAQV+ YGSF TGLSLP+SDLDLVICLPKV  D PA  PG LEGRNAIKETWQQ LA     E WV + S+KIISHTA+PVIKL T +S
Sbjct:   38 PLLGASLLALSAGFAAGGAGRSLLGGGAATALRSRLCEDLFRLLSTITAEEQRLLEYKVAAFHKCKSVVRRLWPRAQVHTYGSFSTGLSLPASDLDLVICLPKVMSDAPAVAPGDLEGRNAIKETWQQNLAGYFRLENWVMNKSIKIISHTAIPVIKLATESS 200          
BLAST of mRNA_D-mesarthrocarpus_Contig10576.1.1 vs. uniprot
Match: A0A2D4C177_PYTIN (NTP_transf_2 domain-containing protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C177_PYTIN)

HSP 1 Score: 171 bits (433), Expect = 6.190e-45
Identity = 89/176 (50.57%), Postives = 112/176 (63.64%), Query Frame = 1
Query:  286 LSLRSRLCEDLSGWVHYVVEKERESFDAKWFAYQRCKAVVRSLWPRAQVNLYGSFVTGLSLPSSDLDLVICLPKVRMDTPADTPGALEGRNAIKETWQQELARSLGAERWVDSNSLKIISHTAVPVIKLTTHASIGLNY---FNGLGHNGEGANRLVKGLVDGFPALRPLALLLKQ 804
            L  RS+L  D+  +V  +  +      A+  A + C A V+SLWPRAQV  YGSFVT L+LP+SD+DLVICLPKVR D PAD  G LEGRNAIKE+WQQ LAR L  E+WV  +S+K I H A+P+I L T     +     F G GHNG   N +V  ++  FPAL P+ L+LK 
Sbjct:  191 LPPRSKLHWDMCEFVSQLQTESNARLSAQMAAIRYCTAAVQSLWPRAQVRPYGSFVTRLALPTSDVDLVICLPKVRRDAPADAAGVLEGRNAIKESWQQNLARKLCQEQWVVQDSVKTIPHAAIPIITLVTKLPFNIRLDISFEGPGHNGLATNNVVFSMIHEFPALAPIMLVLKS 366          
BLAST of mRNA_D-mesarthrocarpus_Contig10576.1.1 vs. uniprot
Match: A0A8K1CMZ5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMZ5_PYTOL)

HSP 1 Score: 171 bits (433), Expect = 1.140e-44
Identity = 92/176 (52.27%), Postives = 115/176 (65.34%), Query Frame = 1
Query:  286 LSLRSRLCEDLSGWVHYVVEKERESFDAKWFAYQRCKAVVRSLWPRAQVNLYGSFVTGLSLPSSDLDLVICLPKVRMDTPADTPGALEGRNAIKETWQQELARSLGAERWVDSNSLKIISHTAVPVIKLTTHA--SIGLNY-FNGLGHNGEGANRLVKGLVDGFPALRPLALLLKQ 804
            L  RS+L  D+  +V  +  +      A+  A + C A V+SLWPRAQV  YGSFVT L+LP+SD+DLVICLPKVR D PAD  G LEGRNAIKE+WQQ LAR L  E WV  +S+K I H A+P+I L T +  S+ L+  F G GHNG   N +V  L+  FPAL P+ L+LK 
Sbjct:  971 LPPRSKLHWDMCEFVSQLQTESNARLSAQMAAIRLCTAAVQSLWPRAQVRPYGSFVTRLALPTSDVDLVICLPKVRRDAPADAAGVLEGRNAIKESWQQNLARKLRQEPWVQPDSVKTIPHAAIPIITLITSSPYSVRLDISFEGPGHNGLATNDVVLSLIHEFPALAPIMLVLKS 1146          
BLAST of mRNA_D-mesarthrocarpus_Contig10576.1.1 vs. uniprot
Match: A0A1V9ZDK5_9STRA (NTP_transf_2 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZDK5_9STRA)

HSP 1 Score: 169 bits (428), Expect = 5.050e-44
Identity = 93/176 (52.84%), Postives = 115/176 (65.34%), Query Frame = 1
Query:  286 LSLRSRLCEDLSGWVHYVVEKERESFDAKWFAYQRCKAVVRSLWPRAQVNLYGSFVTGLSLPSSDLDLVICLPKVRMDTPADTPGALEGRNAIKETWQQELARSLGAERWVDSNSLKIISHTAVPVIKLTT----HASIGLNYFNGLGHNGEGANRLVKGLVDGFPALRPLALLLK 801
            L  RS+L  D+  +V  +  + ++   A     + C + V++LWPRAQV  YGSFVTGLSLPSSDLDLVICLPKVR D PA+ PG LEGRNAIKETWQQ LAR L +E WV   S+K I + ++P+I L T    H  + ++ F G GHNG   N LV  LV   PAL PL L+LK
Sbjct:  691 LPPRSKLHWDICEFVSQLQAETQQRMAAHTAVSRFCVSAVQALWPRAQVRPYGSFVTGLSLPSSDLDLVICLPKVRRDEPAEAPGVLEGRNAIKETWQQHLARKLRSEPWVLPESVKTIPNASIPIITLLTTAPYHVRLDIS-FEGPGHNGLATNDLVLSLVHELPALTPLMLVLK 865          
BLAST of mRNA_D-mesarthrocarpus_Contig10576.1.1 vs. uniprot
Match: A0A1V9YTG9_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YTG9_9STRA)

HSP 1 Score: 168 bits (426), Expect = 9.400e-44
Identity = 92/175 (52.57%), Postives = 111/175 (63.43%), Query Frame = 1
Query:  286 LSLRSRLCEDLSGWVHYVVEKERESFDAKWFAYQRCKAVVRSLWPRAQVNLYGSFVTGLSLPSSDLDLVICLPKVRMDTPADTPGALEGRNAIKETWQQELARSLGAERWVDSNSLKIISHTAVPVIKLTTHASIGLNY---FNGLGHNGEGANRLVKGLVDGFPALRPLALLLK 801
            L  RS+L  D+  +V  +  + +    A     + C + V++LWPRAQV  YGSFVTGLSLPSSDLDLVICLPKVR D PA+ PG LEGRNAIKETWQQ LAR L  E WV   S+K I + ++P+I L T +   +     F G GHNG   N LV  LV   PAL PL L+LK
Sbjct:  695 LPPRSKLHWDICEFVSQLQAETQHRLAAHTAVSRFCVSAVQALWPRAQVRPYGSFVTGLSLPSSDLDLVICLPKVRRDEPAEAPGVLEGRNAIKETWQQHLARRLRTESWVVPESVKTIPNASIPIITLLTTSPYNVRLDISFEGPGHNGLATNDLVHSLVHELPALTPLMLVLK 869          
BLAST of mRNA_D-mesarthrocarpus_Contig10576.1.1 vs. uniprot
Match: A0A024GEF1_9STRA (NTP_transf_2 domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GEF1_9STRA)

HSP 1 Score: 167 bits (424), Expect = 1.770e-43
Identity = 91/176 (51.70%), Postives = 111/176 (63.07%), Query Frame = 1
Query:  286 LSLRSRLCEDLSGWVHYVVEKERESFDAKWFAYQRCKAVVRSLWPRAQVNLYGSFVTGLSLPSSDLDLVICLPKVRMDTPADTPGALEGRNAIKETWQQELARSLGAERWVDSNSLKIISHTAVPVIKLTTHASIGLNY---FNGLGHNGEGANRLVKGLVDGFPALRPLALLLKQ 804
            L  RSRL  D+  +V  +  +  +   A+  A + C A V+SLWPRAQV  YGSFVT L+LPSSDLDLVICLPKVR D PA+  G LEGRNAIKETWQQ LAR L  E W+   S+K I H A+P+I L T A   +     F G GHNG   N +V   +  FP++ PL L+LK 
Sbjct:  671 LPPRSRLHWDMCEFVSLLQAQSDKRKPAQAAAQRLCTATVQSLWPRAQVRAYGSFVTQLALPSSDLDLVICLPKVRHDAPAEAAGVLEGRNAIKETWQQNLARKLRKEPWIVPESVKTIPHAAMPIITLLTKAPYNVRLDISFEGPGHNGLATNDVVHAFIHEFPSVVPLMLVLKS 846          
BLAST of mRNA_D-mesarthrocarpus_Contig10576.1.1 vs. uniprot
Match: W7U5Q9_9STRA (Nucleotidyl transferase domain protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5Q9_9STRA)

HSP 1 Score: 167 bits (424), Expect = 1.780e-43
Identity = 79/133 (59.40%), Postives = 98/133 (73.68%), Query Frame = 1
Query:  286 LSLRSRLCEDLSGWVHYVVEKERESFDAKWFAYQRCKAVVRSLWPRAQVNLYGSFVTGLSLPSSDLDLVICLPKVRMDTPADTPGALEGRNAIKETWQQELARSLGAERWVDSNSLKIISHTAVPVIKLTTHA 684
            L +RSRLC+D++ +V  V          +  A  RC+ V++SLWPRAQV  +GSFV+GL+LPSSD+DL+ICLP VR D PA  PG LEGRNAIKETWQQELAR L A  WV+  S+KIISHTA+PVIK+T  +
Sbjct:  948 LDIRSRLCDDIAAFVERVSVCTGSRLPQQTVAINRCRQVIQSLWPRAQVKAFGSFVSGLALPSSDVDLIICLPNVRRDAPAQAPGVLEGRNAIKETWQQELARRLRATSWVNPASIKIISHTAIPVIKMTVES 1080          
BLAST of mRNA_D-mesarthrocarpus_Contig10576.1.1 vs. uniprot
Match: M4BGH7_HYAAE (NTP_transf_2 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BGH7_HYAAE)

HSP 1 Score: 167 bits (424), Expect = 1.840e-43
Identity = 92/176 (52.27%), Postives = 109/176 (61.93%), Query Frame = 1
Query:  286 LSLRSRLCEDLSGWVHYVVEKERESFDAKWFAYQRCKAVVRSLWPRAQVNLYGSFVTGLSLPSSDLDLVICLPKVRMDTPADTPGALEGRNAIKETWQQELARSLGAERWVDSNSLKIISHTAVPVIKLTTHASIGLNY---FNGLGHNGEGANRLVKGLVDGFPALRPLALLLKQ 804
            L  RS+L  DL  +   +         A+  A+Q C A V+SLWPRAQV  YGS VT L LPSSD+DLVICLPKVR D PAD  G LEGRNAIKETWQQ LAR L  E WV S+S+K + H AVP+I L T     +     F G GHNG   N +V+ L+  FP L P+ L+LK 
Sbjct: 1005 LPPRSKLHWDLCEFAAQLQADSDSRLPAQLAAHQLCTATVQSLWPRAQVRPYGSHVTRLVLPSSDVDLVICLPKVRRDAPADAAGMLEGRNAIKETWQQNLARKLKQEPWVVSDSVKTLPHAAVPIITLLTAPPYNVRLDISFEGPGHNGLATNDVVRALLHEFPPLAPMMLILKS 1180          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10576.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHG7_ECTSI4.840e-9373.85LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835ZHQ3_9STRA2.660e-6572.55Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3XJC8_HETAK2.220e-4855.83Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A2D4C177_PYTIN6.190e-4550.57NTP_transf_2 domain-containing protein (Fragment) ... [more]
A0A8K1CMZ5_PYTOL1.140e-4452.27Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A1V9ZDK5_9STRA5.050e-4452.84NTP_transf_2 domain-containing protein n=1 Tax=Ach... [more]
A0A1V9YTG9_9STRA9.400e-4452.57Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A024GEF1_9STRA1.770e-4351.70NTP_transf_2 domain-containing protein n=1 Tax=Alb... [more]
W7U5Q9_9STRA1.780e-4359.40Nucleotidyl transferase domain protein n=4 Tax=Mon... [more]
M4BGH7_HYAAE1.840e-4352.27NTP_transf_2 domain-containing protein n=1 Tax=Hya... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10576contigD-mesarthrocarpus_Contig10576:18..4193 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FHG7
PFAMsNTP_transf_2,PAP_assoc
Model size804
Max annot lvl2759|Eukaryota
KEGG koko:K03514,ko:K11700
KEGG Pathwayko03018,map03018
KEGG ModuleM00393
Hectar predicted targeting categoryother localisation
GOsGO:0000070,GO:0000278,GO:0000280,GO:0000819,GO:0003674,GO:0003824,GO:0004652,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005844,GO:0006139,GO:0006325,GO:0006342,GO:0006355,GO:0006378,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0007080,GO:0008150,GO:0008152,GO:0008608,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016458,GO:0016740,GO:0016772,GO:0016779,GO:0019219,GO:0019222,GO:0022402,GO:0030702,GO:0030880,GO:0031047,GO:0031048,GO:0031123,GO:0031124,GO:0031134,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031379,GO:0031380,GO:0032991,GO:0034641,GO:0035770,GO:0036464,GO:0040029,GO:0043170,GO:0043186,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043631,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045495,GO:0045814,GO:0045892,GO:0045934,GO:0046483,GO:0048285,GO:0048519,GO:0048523,GO:0050000,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051252,GO:0051253,GO:0051276,GO:0051303,GO:0051310,GO:0051315,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0060255,GO:0060293,GO:0061695,GO:0065007,GO:0070566,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0098813,GO:0140014,GO:1901360,GO:1902494,GO:1902679,GO:1903047,GO:1903506,GO:1903507,GO:1990141,GO:1990234,GO:1990758,GO:1990904,GO:2000112,GO:2000113,GO:2001141
Exons6
Evalue7.93e-94
EggNOG OGsCOG5260@1|root,KOG1906@2759|Eukaryota
EC2.7.7.19
Descriptionpolynucleotide adenylyltransferase activity
Cds size804
COG categoryL
BRITEko00000,ko00001,ko00002,ko01000,ko03016,ko03019,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10576.1.1prot_D-mesarthrocarpus_Contig10576.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10576 18..4193 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789193.3034148-CDS-D-mesarthrocarpus_Contig10576:17..1131680789193.3034148-CDS-D-mesarthrocarpus_Contig10576:17..113Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10576 18..113 -
1680789193.3211432-CDS-D-mesarthrocarpus_Contig10576:575..6751680789193.3211432-CDS-D-mesarthrocarpus_Contig10576:575..675Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10576 576..675 -
1680789193.3307998-CDS-D-mesarthrocarpus_Contig10576:2200..23011680789193.3307998-CDS-D-mesarthrocarpus_Contig10576:2200..2301Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10576 2201..2301 -
1680789193.3421865-CDS-D-mesarthrocarpus_Contig10576:2773..28511680789193.3421865-CDS-D-mesarthrocarpus_Contig10576:2773..2851Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10576 2774..2851 -
1680789193.3550212-CDS-D-mesarthrocarpus_Contig10576:3404..35731680789193.3550212-CDS-D-mesarthrocarpus_Contig10576:3404..3573Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10576 3405..3573 -
1680789193.3732328-CDS-D-mesarthrocarpus_Contig10576:3933..41931680789193.3732328-CDS-D-mesarthrocarpus_Contig10576:3933..4193Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10576 3934..4193 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10576.1.1

>prot_D-mesarthrocarpus_Contig10576.1.1 ID=prot_D-mesarthrocarpus_Contig10576.1.1|Name=mRNA_D-mesarthrocarpus_Contig10576.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=268bp
PPPPPGPGGLGGGGGGGGGGGGGGGGGGGGGGGGQGHGVWLGLGMELGLG
YGQGALGEEYRSLRARLDVPSMGFGLLRGDCSRHPGNQQGNGQGRLSLRS
RLCEDLSGWVHYVVEKERESFDAKWFAYQRCKAVVRSLWPRAQVNLYGSF
VTGLSLPSSDLDLVICLPKVRMDTPADTPGALEGRNAIKETWQQELARSL
GAERWVDSNSLKIISHTAVPVIKLTTHASIGLNYFNGLGHNGEGANRLVK
GLVDGFPALRPLALLLKQ
back to top

mRNA from alignment at D-mesarthrocarpus_Contig10576:18..4193-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10576.1.1 ID=mRNA_D-mesarthrocarpus_Contig10576.1.1|Name=mRNA_D-mesarthrocarpus_Contig10576.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=4176bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10576:18..4193- (Discosporangium mesarthrocarpum MT17_79)
CCCCCCCCCCCCCCGGGGCCTGGGGGTTTGGGGGGGGGGGGGGGGGGGGG GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG GGCAGGGCCATGGGGTTTGGCTGGGGCTAGGGATGGAGTTAGGGTTAGGG TACGGGCAGGGGGCCCTGGGCGAGGAGTACAGGTCGCTGAGGGCCAGGTT GGACGTGCCCTCCATGGGGTTTGGCTTGCTCCGCGGAGACTGCAGCAGAC ACCCCGGCAAGTGCCCCAACCCTCTTGAGTTGATGGCAGCGTACACCTCC ACACAAAGTACCCTAACCCTAAACCCCTGCCCTAAGCCCTGACCCTACCC CCCTGATTGGTTGATACACAGGGGATATTATCTAACCCTATCCCCAATGC TTGTCCTACCCCTGACCCTGACCCTGACCCTGACTAATGAAACATGCCTC CGCACCACTGAAACCCCTCGGTCCTTACTGAACTGGAGGCTGACACTACT TTTCCCCCAACCTCTCTCTCCCCCTTCTCCTCCCCCTCTCCTCCCCCTCC TCCTCCCTGTCCCCCCAGTGCCATCCGGTCAGCATCCTTGCCACCATCTG CAGAACCCCCTTCCTCACAGCCAACAGGGAAATGGGCAAGGGCGATTATC ACTCCGCTCCCGCCTGTGTGAGGACCTTAGTGGGTGGGTGCACTATGTGG TGGAGAAGGAGAGGGAGAGCTTCGATGCCAAGTGGTTCGCATACCAGAGG TGCAAGGCCGTAGTCAGGAGCCTATGGCCACGGGCACAGGTGACTTGGGA CTTAAGAGAACTTGTTTATGGTGGTCAAGTTTTGTCTCCCTGTCAGTCAA GGTTTTCTGTGTCTGTCGGTCAAGGTTGTCTGTGTCTGTCGGTCAAGGTT GTCTGTGTCTGTCGGTCAAGGTTTTCTGTGTCTGTCGGTCAAGGTTTTCT GTGTCTGTCGGTCAAGGTTGTCTGTGTCTGCCGGTCAAGGTTGTCTGTGT CTGTCGGTAAAGGTTTTCTGTGTCTGTCGGTCAAGGTTGTCTGTGTCTGT CGGTCAAGGTTGTCTGTGTCTGTCGGTCAAGTTGGTCTGTCATTCAAGAC TGTCTGTCTGTCAGTCAAGGTTGTCGGTCAAGGTTGTCTAGTCAGTCTTC CACTTCAAAAACAAAAACCAAAAATGACAAGAGTAGTATGGTTATTTAGC CCGAACCCAAACATTGACCTTAACCCTAACCCTAACCCTAACCCTTTACC CTCGCTTTTCACACCGCAGTCATTCACCCAACCCTAACCATACCCCTGAC CTCCACCCCAACATCAACATCCGCCATAACCCTACCCCTAAGGTGAACCT GTATGGCTCCTTTGTGACAGGCCTGTCCCTCCCCTCTAGTGACCTAGACC TTGTGATATGCCTTCCTAAGGTGAGAAAACCCATCTGTAGGACTGCTGCT AACCCTACCCCGAACCCTAACCCTAAATCAAAACCTCCTCTAGCAAGCAT CAGTTACACTTTATCAGACTGGAGATTCGCATGCCTCGAGAAGGACTTGG AAGATACTGTATCATGAATAGAATATGTAATGTGCAGCACTCCAGTGCTT CCATTTCACCAACTTCCATTTCTTTCTATTGTAAGGCTCTAGAGCTATAG TAGAGCTATGAAGTGCTCTGGGGCATTGACAGGAAAAAAATGAATGCTTG GCTTTCGAAAAACGAATTTTTTTCGCTTGAACTTAGGTACTGTAATCCAA GCAAAGGTACAATGGCACAGGGGAGTTCTGAAGTTAGGGTTGGGGTTAAG GTCAGGGCAATGTCCAATAATAAGTAAAAGAAGGTTCAATCACAAGCAAA CATTGCGCCTTGGTAACACGTTTTGAAAAATACCTCATCAAGGTGAGGAT GGACACCCCTGCAGACACCCCGGGCGCCCTGGAGGGCAGGAATGCCATCA AGGAGACCTGGCAACAGGAGCTGGCCAGAAGCCTTGGGGCAGAGTGAGTA TGCTTGACTAACCTTTAACCAAACCCAGATCCTAACCCTGACCCTAATCA AGGAGACCTGGGAGCAGGGGTTGGTCAGAAGCCTTGAAAGAGAGTAAGCA TGCTCAGCCTAATCTCAACCCTAGACCTAACCTAACACAAATTAAGGAGA CTTGGCAATAAGAGGTAGCCAGAAGCACTGGGGAAGATTAAGTGTGCTCT TTGTAACACAATCTTAAACCTAACCCTAACCCTCACCCTCACCCTTCATT AACGCCGCATGATCCCATCCATAAAACCAATTGAAACACTGCCCCTGCCC CTGCCCCTGCCCCTGCTCCTGCCCCTAACCCTTGCGATACTGCGCTCAAC TCATAGCGAGATAGTGCATTGTGCGACTGTGTCAAATCAGGGTTAGGGTG TGGGATAGGGATATGGTTGGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAG GGTTAGGGTTAGGGTTAGGGTTGGGGTTAGGGTTAGGGTTGGGGTTAGGG GTAGGGGTAGGGTTAGGGTTAGGGTTAGGGTTGGGGTTAGGGTTTAGGGT TAGGGTTATTCAGTGAGGATTAATGAGTGATCCATGTGACACAATCGACA AAAAAAAAGGGGGAAAAAAAATCAATCCTCTGCATAGGGTTAAATACGAT TTTTTCATTAGCTGGGTTTTGATATGGTTTAACCTTGATATGGTTTAACC TTTTTTGCTTTGTACCTTGTGTTTCACTTAGCTACACGGTCAGGGTTAGG GTTCAGGCAATGCTGATGTCCGTGGAGCTATGAAGCCATGCACAGCAATT GTAAGGTGCCTGAACATGCACTTGGAGATTGCTGTACTCCTATCCTGTAT GGTAGACTAGTGCCCCATAGGGCTCTCTCTACTGTAATGCCTGTATGCCC AGTATCTGGTAGGTCAGGGTTAGGGTTAGTGTCAGCCTTCTGCTTCTTGG AAGCAACGAATCTCTTCATCGTTCACAAGCAATGAGAGGAGTTGGTAGCC CTAACCCTAAACCCCGGTATCCCTAACTGTAAGGGTAATATTTTTGCTAC CCCTGTCCCCAGAAGAAAGAAAGAGTCAAAGAAACAAATGGCCTGTCCCT CCTAAACTACGCCTCCCATATCTGATCAGAGAGCATTTCTTGTGCATGTG GGGGGGGGGGGGAGTCTTTATGCCTGCCCCTTCTTTCTTCAAGCTGGCAT TTGTTAACCCTATCCCTAACTTTAACACAAAAATAGTCATGACATGATGC ACTGCAAACCCTCCCCCTAGTACATCATGTAAATTATTTGGAAGTAAATC CTACAATTGTAGAGTACAATTGCACTCCAAACCTCTACTTTAGAATAATT CTATTTTTCCAACCCTACCTGACCCAGGCCTCTGGCAGGGGTGGGGTGTT GTTTTTCTACTTTTTGCCTTGACTGTAAGGTAATTCTTTCTAATTTATTG CATCTTTATGATCATGGGCTCTCCTTTCACCCCCTCTTGGCCTGACCCCC CTTTCCTCCCCTCCACAGACGCTGGGTAGACAGCAACTCCCTGAAGATCA TCAGCCACACCGCAGTGCCAGTGATCAAGCTAACAACACACGCCTCCATA GGTTTGAACTACTTCAATGTTGCCGGTGCAGGCTATGCCAACACCACCAC TGGGGTTAGGGCAGACAGGAGGAGCAAGAGCCCCACCCCGATCGCTGTTG CCCATGCCCCCCTGCCCCCACAGCCCATGCCCCCCACCTTAGCCACAACC ACTCCAGCCTCAAACCCTAACCCTAACCCTAATCCTGTCGCGGGAACGAG CAAAGACCACACCCAGGACTCTGACCCTGACTCTAACAGACCAGAGCCGG GGTCAGCTGCGCCCGAAGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGAA AAGGAAGGGGAGGTTTCTACGGGGAAGAGGGAGGCGGGCACGGCGGAAGG GGGGGCGGCGGAAGCAGCGGCGGCGGCAACAACAGCAGCAGCAGCAGCAT CCGGGGTTGGGCCCCCTGGGATCAGCGTTGGGAATTGGGAACCAACGCTT CCGAGCGTTTTGGTGGATGTGAGCTTTGAGGGGCTGGGGCACAACGGGGA GGGAGCCAACCGCCTGGTTAAAGGTTTGGTGGACGGCTTCCCAGCGCTTC GCCCACTGGCTCTTTTGCTCAAGCAG
back to top

Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10576:18..4193-

>mRNA_D-mesarthrocarpus_Contig10576.1.1 ID=mRNA_D-mesarthrocarpus_Contig10576.1.1|Name=mRNA_D-mesarthrocarpus_Contig10576.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=804bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10576:18..4193- (Discosporangium mesarthrocarpum MT17_79)
CCCCCCCCCCCCCCGGGGCCTGGGGGTTTGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGCAGGGCCATGGGGTTTGGCTGGGGCTAGGGATGGAGTTAGGGTTAGGG
TACGGGCAGGGGGCCCTGGGCGAGGAGTACAGGTCGCTGAGGGCCAGGTT
GGACGTGCCCTCCATGGGGTTTGGCTTGCTCCGCGGAGACTGCAGCAGAC
ACCCCGGCAACCAACAGGGAAATGGGCAAGGGCGATTATCACTCCGCTCC
CGCCTGTGTGAGGACCTTAGTGGGTGGGTGCACTATGTGGTGGAGAAGGA
GAGGGAGAGCTTCGATGCCAAGTGGTTCGCATACCAGAGGTGCAAGGCCG
TAGTCAGGAGCCTATGGCCACGGGCACAGGTGAACCTGTATGGCTCCTTT
GTGACAGGCCTGTCCCTCCCCTCTAGTGACCTAGACCTTGTGATATGCCT
TCCTAAGGTGAGGATGGACACCCCTGCAGACACCCCGGGCGCCCTGGAGG
GCAGGAATGCCATCAAGGAGACCTGGCAACAGGAGCTGGCCAGAAGCCTT
GGGGCAGAACGCTGGGTAGACAGCAACTCCCTGAAGATCATCAGCCACAC
CGCAGTGCCAGTGATCAAGCTAACAACACACGCCTCCATAGGTTTGAACT
ACTTCAATGGGCTGGGGCACAACGGGGAGGGAGCCAACCGCCTGGTTAAA
GGTTTGGTGGACGGCTTCCCAGCGCTTCGCCCACTGGCTCTTTTGCTCAA
GCAG
back to top