mRNA_D-mesarthrocarpus_Contig10571.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10571.1.1 vs. uniprot
Match: A0A6H5KKI7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKI7_9PHAE) HSP 1 Score: 155 bits (391), Expect = 3.310e-43 Identity = 90/136 (66.18%), Postives = 104/136 (76.47%), Query Frame = 1
Query: 22 MSEEDRLYAIPEEFKKKVEEAKELFDTSVVDKRNEMDGEVGSGAQIAWNTGLAEIALPIEFKLRNMEATHVARQKMERQKELKRRSQAGQSSSVVGSLTANYSHHQKEWAINMRAMNAQQAQAEAATQAKATTQGP 429
+SEEDRLY IP++FKKKVEEAK FDT ++ NEMDGEVGSGAQIAWNTGLAEIALPIEFKL+NME T AR KME + RR+ G SSS+ GSLTANYSHHQKEWA+ +RA+ +QA AE + T GP
Sbjct: 172 LSEEDRLYTIPDDFKKKVEEAKVEFDTGA-NRGNEMDGEVGSGAQIAWNTGLAEIALPIEFKLKNMEDTLAARDKMESVRAA-RRNAPGASSSLSGSLTANYSHHQKEWALQIRALQNRQAMAEESQTKAPTKSGP 305
BLAST of mRNA_D-mesarthrocarpus_Contig10571.1.1 vs. uniprot
Match: D7G4L3_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4L3_ECTSI) HSP 1 Score: 154 bits (389), Expect = 5.150e-42 Identity = 90/136 (66.18%), Postives = 104/136 (76.47%), Query Frame = 1
Query: 22 MSEEDRLYAIPEEFKKKVEEAKELFDTSVVDKRNEMDGEVGSGAQIAWNTGLAEIALPIEFKLRNMEATHVARQKMERQKELKRRSQAGQSSSVVGSLTANYSHHQKEWAINMRAMNAQQAQAEAATQAKATTQGP 429
+SEEDRLY IPE+FKKKVEEAK FDT ++ +EMDGEVGSGAQIAWNTGLAEIALPIEFKL+NME T AR KME + RR+ G SSS+ GSLTANYSHHQKEWA+ +RA+ +QA AE + T GP
Sbjct: 251 LSEEDRLYTIPEDFKKKVEEAKVEFDTGA-NRGDEMDGEVGSGAQIAWNTGLAEIALPIEFKLKNMEDTLAARDKMESVRAA-RRNAPGASSSLSGSLTANYSHHQKEWALQIRALQNRQAMAEESQTKAPTKSGP 384
BLAST of mRNA_D-mesarthrocarpus_Contig10571.1.1 vs. uniprot
Match: A0A836CP27_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP27_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 2.860e-17 Identity = 51/112 (45.54%), Postives = 69/112 (61.61%), Query Frame = 1
Query: 61 FKKKVEEAKELFDTSVVDKRNEMDGEVGSGAQIAWNTGLAEIALPIEFKLRNMEATHVARQKMERQKE----------LKRRSQAGQS-SSVVGSLTANYSHHQKEWAINMR 363
K+ V EAK +F T K +++DGE+G GAQIAWNTG+AE+ LPI+ K+RN+EAT AR + R +A ++ S ++GS TANYSHH KE+A MR
Sbjct: 1 MKRTVHEAKAMFGTF---KADDLDGEIGQGAQIAWNTGIAEVDLPIDVKMRNIEATKAARAAFIARTRRXXXXXXXXXXXRGDEAAEAPSELIGSFTANYSHHSKEYAAKMR 109
BLAST of mRNA_D-mesarthrocarpus_Contig10571.1.1 vs. uniprot
Match: W7TWM8_9STRA (Hepatocellular carcinoma-associated antigen 59 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWM8_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 4.280e-17 Identity = 47/85 (55.29%), Postives = 61/85 (71.76%), Query Frame = 1
Query: 112 DKRNEMDGEVGSGAQIAWNTGLAEIALPIEFKLRNMEATHVARQKMERQKELKRRSQAGQSSSVVGSLTANYSHHQKEWAINMRA 366
DK + +G VG GA IA++TG+AE+ALP+EFKL+N+EAT AR E Q L R Q + ++GSLT NY HH+KE+AINMRA
Sbjct: 156 DKAADAEGGVGEGAPIAFSTGIAEVALPVEFKLQNIEATERARLLQEEQ--LLLRQQGEKKGEIIGSLTHNYHHHRKEYAINMRA 238
BLAST of mRNA_D-mesarthrocarpus_Contig10571.1.1 vs. uniprot
Match: A0A7R9U2X2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2X2_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 1.710e-8 Identity = 48/127 (37.80%), Postives = 75/127 (59.06%), Query Frame = 1
Query: 31 EDRLYAIPEEFKKKVEEAKELFDTSVVDKRNE-MDGEV-GSGAQIAWNTGLAEIALPIEFKLRNMEATHVARQKMERQKELKRRSQAGQSSSVV-----GSLTANYSHHQKEWAINMRAMNAQQAQA 390
ED+LY +PE + V++ ++L DKR E +D E G+G +AW +G+AE+ALPIE K RN+EAT A K LK + G S + G+++ NYS H++E+A +R ++ + A+A
Sbjct: 150 EDQLYTLPEHLR--VQKQQKLDGEK--DKRGETIDAETDGAGGPLAWGSGIAEVALPIEEKRRNVEATERAI------KALKELQEKGASDPLAVRSEDGNVSVNYSKHRREYAQEIRLLSERAAKA 266
BLAST of mRNA_D-mesarthrocarpus_Contig10571.1.1 vs. uniprot
Match: A0A7S2FKP9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FKP9_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 3.060e-8 Identity = 33/76 (43.42%), Postives = 51/76 (67.11%), Query Frame = 1
Query: 22 MSEEDRLYAIPEEFKKKVEEAKELFDTSVVDKRNEMDGEVGSGAQIAWNTGLAEIALPIEFKLRNMEATHVARQKM 249
M+EED+LY IP+EFK K +++ D +KR +G G A + NTG+AE++LP++F+LRN++ T AR K+
Sbjct: 135 MTEEDKLYLIPDEFKSK---PRDVGDDGTFNKR---EGFSGEAAPLFMNTGIAEVSLPLDFRLRNIQKTDEARAKL 204
BLAST of mRNA_D-mesarthrocarpus_Contig10571.1.1 vs. uniprot
Match: A0A7S2WSH1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSH1_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 3.380e-8 Identity = 40/112 (35.71%), Postives = 62/112 (55.36%), Query Frame = 1
Query: 28 EEDRLYAIPEEFKKKVEEAKELFDTSVVDKRNEMDGEVGSGAQIAWNTGLAEIALPIEFKLRNMEATHVARQKMERQKELKRRSQAGQSSSVVGSLTANYSHHQKEWAINMR 363
EED LY IPE + V A ++G G A + NTG+AE+ LP+ F+L+N+E T R KM+ ++ +R ++G S GS +NY+HH++E A+ M+
Sbjct: 183 EEDALYQIPELAPEAVGGAS-------------VEGGTGHAAPLFMNTGIAEVNLPMRFRLKNIEDTDKLRAKMDGERPTRRPQESG-SGLPTGSFNSNYNHHRREHAMMMK 280
BLAST of mRNA_D-mesarthrocarpus_Contig10571.1.1 vs. uniprot
Match: A0A482REQ4_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482REQ4_9ARCH) HSP 1 Score: 58.9 bits (141), Expect = 3.990e-8 Identity = 34/83 (40.96%), Postives = 50/83 (60.24%), Query Frame = 1
Query: 130 DGEVGSGAQIAWNTGLAEIALPIEFKLRNMEATHVARQKMERQKELKRRSQAGQSSS-----VVGSLTANYSHHQKEWAINMR 363
DG+VG G + TG+AE+ALP E KLRN+E T RQ+M ++ + A GS+TANY+ H++E+A+NM+
Sbjct: 11 DGDVGEGGMMLAGTGIAEVALPTEEKLRNIEETERLRQQMLERRAARAAEMADDGGLPHARYTSGSITANYTMHRREFAMNMK 93
BLAST of mRNA_D-mesarthrocarpus_Contig10571.1.1 vs. uniprot
Match: A0A2I0AM27_9ASPA (Uncharacterized protein n=2 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0AM27_9ASPA) HSP 1 Score: 56.2 bits (134), Expect = 1.590e-6 Identity = 40/110 (36.36%), Postives = 60/110 (54.55%), Query Frame = 1
Query: 34 DRLYAIPEEFKKKVEEAKELFDTSVVDKRNEMDGEVGSGAQIAWNTGLAEIALPIEFKLRNMEATHVARQKMERQKELKRRSQAGQSSSVVGSLTANYSHHQKEWAINMR 363
D LYA+PE K V KRN + + W TG+AE+ LPIE+KLRN+E T A+ K+ ++K L R++A SS+ S +A+Y H +++A +R
Sbjct: 122 DELYAVPEHLK--------------VRKRNSEE------SSTQWTTGIAEVQLPIEYKLRNIEETEAAK-KLLQEKRLVGRTKA--ESSIPSSYSADYFHRGRDYAEKLR 208
BLAST of mRNA_D-mesarthrocarpus_Contig10571.1.1 vs. uniprot
Match: UPI0009012AA9 (uncharacterized protein C9orf78 homolog n=3 Tax=Ipomoea TaxID=4119 RepID=UPI0009012AA9) HSP 1 Score: 56.2 bits (134), Expect = 1.740e-6 Identity = 38/111 (34.23%), Postives = 58/111 (52.25%), Query Frame = 1
Query: 31 EDRLYAIPEEFKKKVEEAKELFDTSVVDKRNEMDGEVGSGAQIAWNTGLAEIALPIEFKLRNMEATHVARQKMERQKELKRRSQAGQSSSVVGSLTANYSHHQKEWAINMR 363
ED LY IPE K V +RN + + W TG+AEI LPIE+KL+N+E T A++ ++ ++ + R SS++ S TA+Y H K++A +R
Sbjct: 140 EDELYQIPEHLK--------------VKRRNSEE------SSTQWTTGIAEIQLPIEYKLKNIEETEAAKKLLQEKRFMGR---TKTDSSILSSYTADYFHRGKDYAEKLR 227 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10571.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10571.1.1 >prot_D-mesarthrocarpus_Contig10571.1.1 ID=prot_D-mesarthrocarpus_Contig10571.1.1|Name=mRNA_D-mesarthrocarpus_Contig10571.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=145bp MMSEEDRLYAIPEEFKKKVEEAKELFDTSVVDKRNEMDGEVGSGAQIAWNback to top mRNA from alignment at D-mesarthrocarpus_Contig10571:152..3449- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10571.1.1 ID=mRNA_D-mesarthrocarpus_Contig10571.1.1|Name=mRNA_D-mesarthrocarpus_Contig10571.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3298bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10571:152..3449- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10571:152..3449- >mRNA_D-mesarthrocarpus_Contig10571.1.1 ID=mRNA_D-mesarthrocarpus_Contig10571.1.1|Name=mRNA_D-mesarthrocarpus_Contig10571.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=435bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10571:152..3449- (Discosporangium mesarthrocarpum MT17_79)back to top |