mRNA_D-mesarthrocarpus_Contig10560.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
|
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10560.2.1 vs. uniprot
Match: D7G5N6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5N6_ECTSI) HSP 1 Score: 134 bits (337), Expect = 9.910e-37 Identity = 61/132 (46.21%), Postives = 82/132 (62.12%), Query Frame = 1
Query: 7 GNRSLPVLEGVDVVAYYQLDPGADPVHGVSSIRAYLNNYAFYFSTEENKQVFQANPWKYAPAWGGFCAWGIAAEDIWSKGFLGPPADPASWLIRN-GVLYVFHSSVPMKEYTDDMYGNKVAGDNRWASWWGK 399
G + PVL G DVV+Y+ L G ++G N Y F F++ +NK +F+A+P Y PAWGGFCA+GIAAED W+ LGPP+DP SWLI + VL +F S VP + +D+ GN G+ W WWG+
Sbjct: 76 GTSTEPVLNGADVVSYFSLKEGEAAMYGFEEYPVKYNGYTFLFASAQNKALFEASPLDYIPAWGGFCAYGIAAEDWWTVSTLGPPSDPNSWLITDDNVLRIFRSEVPKAYFMEDIPGNIATGNRIWTGWWGE 207
BLAST of mRNA_D-mesarthrocarpus_Contig10560.2.1 vs. uniprot
Match: D7FW13_ECTSI (YHS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW13_ECTSI) HSP 1 Score: 129 bits (323), Expect = 2.540e-34 Identity = 62/132 (46.97%), Postives = 83/132 (62.88%), Query Frame = 1
Query: 1 CTGNRSLPVLEGVDVVAYYQLDPGADPVHGVSSIRAYLNNYAFYFSTEENKQVFQANPWKYAPAWGGFCAWGIAAEDIWSKGFLGPPADPASWLIR--NGVLYVFHSSVPMKEYTDDMYGNKVAGDNRWASW 390
CTG+ LPVL GVDVVAY+ L G+ PV G ++ + +Y FYFS+ EN + F+++P +Y PAWGGFC++G+AAE W LGP DP+ WLI +G L+VF S PM ++ N AGD W W
Sbjct: 106 CTGDTHLPVLGGVDVVAYWTLPAGSKPVFGTPNLVSLFGDYRFYFSSIENLRTFESDPVRYIPAWGGFCSYGVAAETFWRPDILGPFGDPSKWLILPGDGKLHVFRSERPMTKFLLAPGENLEAGDAIWNGW 237
BLAST of mRNA_D-mesarthrocarpus_Contig10560.2.1 vs. uniprot
Match: A0A6V1WB01_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WB01_HETAK) HSP 1 Score: 121 bits (303), Expect = 8.070e-32 Identity = 57/132 (43.18%), Postives = 78/132 (59.09%), Query Frame = 1
Query: 7 GNRSLPVLEGVDVVAYYQLDPGA-DPVHGVSSIRAYLNNYAFYFSTEENKQVFQANPWKYAPAWGGFCAWGIAAEDIWSKGFLGPPADPASWLIRNGVLYVFHSSVPMKEYTDDMYGNKVAGDNRWASWWGK 399
G + PV++G DVVAY+ L A + V G +A + Y FYFSTEENKQ F +P KY P +G FC+WGI+AE W+ LGPP DP W I G L +F+ K++ D+ + G RW +W+G+
Sbjct: 69 GESAAPVIQGYDVVAYFDLPEDATEAVLGKEDYKANYHGYDFYFSTEENKQAFLGSPEKYVPKYGAFCSWGISAESFWTPSTLGPPVDPNVWQIYAGELLLFYREAAKKKFMVDVNKHFEEGSKRWLNWYGE 200
BLAST of mRNA_D-mesarthrocarpus_Contig10560.2.1 vs. uniprot
Match: A0A6V1P5D3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P5D3_HETAK) HSP 1 Score: 108 bits (271), Expect = 5.280e-25 Identity = 58/140 (41.43%), Postives = 77/140 (55.00%), Query Frame = 1
Query: 1 CTGNRSLPVLEGVDVVAYYQLDPGADPVHGVSSIRAYLNN----YAFYFSTEENKQVFQANPWKYAPAWGGFCAWGIAAEDIWSKG----FLGPPADPASWLIRNGVLYVFHSSVPMKEYTDDMYGNKVAGDNRWASWWG 396
CT +R V +GVDVVAY L G++PV G A L Y FYFS+EEN+ F NPW YAPAWGGF A+ ++AE+ W +G LGP D + W G LYVF ++ + + Y + RW+ W+G
Sbjct: 353 CTKDR-YAVFDGVDVVAYSYLPDGSEPVMGKEEFPAKLQTSEKAYLFYFSSEENRNAFLENPWAYAPAWGGFDAYAMSAENEWGRGGSKRILGPDPDLSQWAYFEGRLYVFGNADSKAAWMTNPYPHLDEASKRWSGWYG 491
BLAST of mRNA_D-mesarthrocarpus_Contig10560.2.1 vs. uniprot
Match: A0A7S2W6K5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6K5_9STRA) HSP 1 Score: 102 bits (255), Expect = 1.000e-24 Identity = 53/129 (41.09%), Postives = 74/129 (57.36%), Query Frame = 1
Query: 1 CTGNRSLPVLEGVDVVAYYQLDPGADPVHGVSSIRAYLNNYAFYFSTEENKQVFQANPWKYAPAWGGFCAWGIAAEDIWSKGFLGPPADPASWLIRNGVLYVFHSSVPMKEYT-DDMYGNKVAGDNRWA 384
CT PVL GVDVV Y+ L V G + A + Y F+FST+ NK +F+ NP KY P +GGFCA+GI ++ W+ L P+DP +W I +G LY+F SS ++E+ D+ + G RW
Sbjct: 60 CTSPSLGPVLSGVDVVGYFSLSTDEQAVQGSPDLVARVGKYDFFFSTQRNKALFEVNPRKYMPQFGGFCAYGIT-KNSWTADSLDLPSDPDAWRIIDGKLYLFKSSSYLEEFVAGDVETELLGGYKRWG 187
BLAST of mRNA_D-mesarthrocarpus_Contig10560.2.1 vs. uniprot
Match: A0A7S3UVA0_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVA0_HETAK) HSP 1 Score: 102 bits (253), Expect = 1.420e-24 Identity = 51/130 (39.23%), Postives = 70/130 (53.85%), Query Frame = 1
Query: 1 CTGNRSLPVLEGVDVVAYYQLDPGADPVHGVSSIRAYLNNYAFYFSTEENKQVFQANPWKYAPAWGGFCAWGIAAEDIWSKGFLGPPADPASWLIRNGVLYVFHSSVPMKEYTDDMYGNKVAGDNRWASW 390
C + PVLEG DVVAY+ LDP D V G S + + FYFS++EN + F+++P KY PAWGGFCA+G+A E W+ + P +W I +G L+ FH + + GD W W
Sbjct: 8 CLDAGAGPVLEGYDVVAYFGLDPLDDGVQGSSEFTSVYQGFEFYFSSKENMEKFESDPEKYVPAWGGFCAYGVAEETWWTAETMSAGVVPDAWRIIDGRLFFFHDIGVAAWFAALLPDAIREGDATWHGW 137
BLAST of mRNA_D-mesarthrocarpus_Contig10560.2.1 vs. uniprot
Match: A0A7S0AP94_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AP94_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 3.570e-22 Identity = 53/132 (40.15%), Postives = 69/132 (52.27%), Query Frame = 1
Query: 22 PVLEGVDVVAYY---QLDPGADPVHGVSSIRAYLNNYAFYFSTEENKQVFQANPWKYAPAWGGFCAWGIAAEDI---WSKGFLGPPADPAS-WLIRNGVLYVFHSSVPMKEYTDDMYGNKVAGDNRWASWWG 396
PVL G DVV Y+ G V G Y F+FST EN++ F NPWKYAPAWGGFC+WG+ E W+ FLGPPA P + W+I +GVL + ++ N RW++W+G
Sbjct: 30 PVLLGFDVVQYHFIPSFKDGGVAVRGKPEFAYNFEGYQFWFSTLENRRAFVENPWKYAPAWGGFCSWGVGLEVAGWPWAIDFLGPPASPWNGWIIVDGVLIFNIWESYSDRFARNLDTNMALAAERWSNWFG 161
BLAST of mRNA_D-mesarthrocarpus_Contig10560.2.1 vs. uniprot
Match: A0A7S2FI38_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FI38_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 1.100e-19 Identity = 48/138 (34.78%), Postives = 72/138 (52.17%), Query Frame = 1
Query: 22 PVLEGVDVVAYYQLD--PGADPVHGVSSIRAYLNNYAFYFSTEENKQVFQANPWKYAPAWGGFCAWGIAAED----------IWSKGFLGPPADPASWLIRNGVLYVFHSSVPMKEYTDDMYGNKVAGDNRWASWWGK 399
PVL G DV Y+ LD G + V G+ A Y FYF++ N+ +F+ANP YAPA+GGFCA+G++ D +WS P D + + +G LY+F S + + + + GD W+SW+G+
Sbjct: 99 PVLSGFDVTEYFSLDYDAGDEAVQGLDEYTATYMGYTFYFASSANRALFEANPSLYAPAYGGFCAYGVSGYDGNNFMTKQTQLWST-----PVDVNEYAVIDGTLYMFRGSDAREFFVESSDTDISGGDGLWSSWFGE 231
BLAST of mRNA_D-mesarthrocarpus_Contig10560.2.1 vs. uniprot
Match: A0A7S2CI31_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CI31_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 2.040e-19 Identity = 45/131 (34.35%), Postives = 68/131 (51.91%), Query Frame = 1
Query: 1 CTGNRSLPVLEGVDVVAYYQLDPGADPVHGVSSIRAYLNNYAFYFSTEENKQVFQANPWKYAPAWGGFCAWGIAAEDIWSKGFLGPPADPASWLIRNGVLYVFHSSVPMKEY-TDDMYGNKVAGDNRWASW 390
C + PV++G D+V Y+ L PGAD G + Y F F +N + F +P Y P +GGF A+ I+ + ++ LGP A+P W I N LY F P+K++ T +M +AG+ W S+
Sbjct: 81 CLLTTTGPVMDGYDIVEYFNLKPGADGRKGTEEFESTFGGYTFRFLNNKNMKAFGVDPTSYLPQYGGFDAYQISKDSWYTAETLGPDANPNVWKITNDKLYFFMFDTPLKKFETGNMSARIIAGNQIWRSY 211
BLAST of mRNA_D-mesarthrocarpus_Contig10560.2.1 vs. uniprot
Match: A0A7S2CSE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CSE7_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 9.040e-19 Identity = 49/139 (35.25%), Postives = 72/139 (51.80%), Query Frame = 1
Query: 22 PVLEGVDVVAYYQLDPGAD---------PVHGVSSIRAYLNNYAFYFSTEENKQVFQANPWKYAPAWGGFCAWGIAAED----IWSKG-FLGPPADPASWLIRNGVLYVFHSSVPMKEYTDDMYGNKVAGDNRWASWWG 396
PVLEG+DVV+Y+ D G +I + + Y+FYFS+ EN+ +F NP KY P +GGFCA+GI+ D + S+ F P DP + I G LY+F S + + + N G+++W W G
Sbjct: 2 PVLEGMDVVSYFDEADNTDFYMAPDDFSATLGQETISSTFDGYSFYFSSTENQALFDENPVKYIPTFGGFCAYGISGYDGMNYLHSESQFWSVPVDPDQYAILEGDLYLFRGSGAKELFVNKSQTNIKGGESQWTGWVG 140 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10560.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10560.2.1 >prot_D-mesarthrocarpus_Contig10560.2.1 ID=prot_D-mesarthrocarpus_Contig10560.2.1|Name=mRNA_D-mesarthrocarpus_Contig10560.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=133bp CTGNRSLPVLEGVDVVAYYQLDPGADPVHGVSSIRAYLNNYAFYFSTEENback to top mRNA from alignment at D-mesarthrocarpus_Contig10560:3089..4243+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10560.2.1 ID=mRNA_D-mesarthrocarpus_Contig10560.2.1|Name=mRNA_D-mesarthrocarpus_Contig10560.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1155bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10560:3089..4243+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10560:3089..4243+ >mRNA_D-mesarthrocarpus_Contig10560.2.1 ID=mRNA_D-mesarthrocarpus_Contig10560.2.1|Name=mRNA_D-mesarthrocarpus_Contig10560.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=399bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10560:3089..4243+ (Discosporangium mesarthrocarpum MT17_79)back to top |