mRNA_D-mesarthrocarpus_Contig10553.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10553.2.1 vs. uniprot
Match: A0A3C0P2Y1_9GAMM (ATP-dependent RNA helicase HrpA n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3C0P2Y1_9GAMM) HSP 1 Score: 775 bits (2001), Expect = 9.250e-266 Identity = 415/608 (68.26%), Postives = 486/608 (79.93%), Query Frame = 1
Query: 4 VSDNLEAELVHCQIADEYRLRRQLRKLERREGNTGKNQKAGKNP-KLAQELARLEQAISRSRDQVAQRDAAIPQVINFPEQLPVSQQADKIKSLLAQHQVLVVAGDTGSGKTTQLPKLCLAAGLGRRGLIGHTQPRRLAAVSVANRIAEELGTETGAGVAYQVRFNEKQSPSSYLKVMTDGILLAEIQQDRFLNRYEVLIVDEAHERSLNIDFLLGFLKQLLARRKDLKLIITSATIDVEKFARHFSDAPIVEVAGRTYPVEVRYEPIAA-DRDSSASDVQAEVISDSVRQILGEH---KQGRGGDILVFLSGEREIRETAQLLRKQRLPRLEILPLYARLRQSEQTRIFQPHKGVRVVLATNVAETSLTVPGINYVIDTGLARISRYSLQSKVQRLPIEPISQASANQRKGRCGRLADGICIRLYSEADFLSRPEFTDPEIRRTNLGSVILRMKHLRLGEPESFPFIEPPESRAISEGIKLLIELDALDAQQQLTAAGKQMAALPVDPRLARMLITAAAEHCLAELLIIVSVLSIQDPREIGADNRQLAAQKLEQFDHPDSDFLTLVNLWHDYEKRRQQLNQNQLRKYCKAHFLSFMRMREWREVHR 1812
V +L+++L CQ+AD+YR RR++R+LE KAG + K QEL RL +A+ S R AIP I FP LP++++ ++I +LL HQV+VVAGDTGSGKTTQLPK+CL AGLGRRGLIGHTQPRRLAAVSVANRIAEEL T+ G GV +QVRFNEKQS SS+LK+MTDGILLAEIQ DRFLNRYEV+I+DEAHERSLNIDFLLGFLKQL +R DLKLIITSATIDV+KF+ HF +AP+V V+GRTYPV+ RY P+ + + + D+Q + I ++R I KQG G D+LVFLS EREIR+TA +LRKQR +E+LPLYARLR SEQ +IF+PH G RVVL+TNVAETSLTVPGI YV+DTG ARISRYSLQSKVQRLPIE +SQASANQRKGRCGRL DGICIRLYSE DF SRP +TDPEI+RTNL SVILRM +L+LG+ E FPFIE PE AI EG KLL+EL+AL ++LT G QMA LPVDPR ARML+TA +EHCL E+LIIVSVLSIQDPREI ++NRQ A QKL QF+HP+SDFL VNLW+ YE +RQ L+QNQLRKYCK HFLSFMRMREWREVHR
Sbjct: 30 VEKSLQSDLDRCQLADQYRFRRKIRQLE----------KAGFSAQKKNQELTRLAKAMEHSIAACETRATAIPSQITFPSLLPITEKVEEITALLETHQVIVVAGDTGSGKTTQLPKICLQAGLGRRGLIGHTQPRRLAAVSVANRIAEELATQPGEGVGFQVRFNEKQSASSFLKLMTDGILLAEIQNDRFLNRYEVIIIDEAHERSLNIDFLLGFLKQLTGKRSDLKLIITSATIDVDKFSSHFHNAPVVSVSGRTYPVDTRYMPLVSLNNEEKNDDLQIDAIVTALRDIAVSETAAKQGPG-DVLVFLSSEREIRDTAAVLRKQRFNNMEVLPLYARLRHSEQLKIFKPHPGRRVVLSTNVAETSLTVPGIRYVVDTGFARISRYSLQSKVQRLPIEAVSQASANQRKGRCGRLEDGICIRLYSETDFDSRPLYTDPEIKRTNLASVILRMLYLKLGDVEDFPFIETPEPSAIREGFKLLVELNALTHNRRLTDIGGQMAMLPVDPRYARMLVTANSEHCLREVLIIVSVLSIQDPREISSENRQAALQKLAQFNHPESDFLGFVNLWNHYETQRQDLSQNQLRKYCKTHFLSFMRMREWREVHR 626
BLAST of mRNA_D-mesarthrocarpus_Contig10553.2.1 vs. uniprot
Match: A0A2E9JDE2_9GAMM (ATP-dependent RNA helicase HrpA n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E9JDE2_9GAMM) HSP 1 Score: 767 bits (1980), Expect = 5.730e-263 Identity = 410/603 (67.99%), Postives = 480/603 (79.60%), Query Frame = 1
Query: 13 NLEAELVHCQIADEYRLRRQLRKLERREGNTGKNQKAGKNPKLAQELARLEQAISRSRDQVAQRDAAIPQVINFPEQLPVSQQADKIKSLLAQHQVLVVAGDTGSGKTTQLPKLCLAAGLGRRGLIGHTQPRRLAAVSVANRIAEELGTETGAGVAYQVRFNEKQSPSSYLKVMTDGILLAEIQQDRFLNRYEVLIVDEAHERSLNIDFLLGFLKQLLARRKDLKLIITSATIDVEKFARHFSDAPIVEVAGRTYPVEVRYEPIAA-DRDSSASDVQAEVISDSVRQILGEHKQGRGG--DILVFLSGEREIRETAQLLRKQRLPRLEILPLYARLRQSEQTRIFQPHKGVRVVLATNVAETSLTVPGINYVIDTGLARISRYSLQSKVQRLPIEPISQASANQRKGRCGRLADGICIRLYSEADFLSRPEFTDPEIRRTNLGSVILRMKHLRLGEPESFPFIEPPESRAISEGIKLLIELDALDAQQQLTAAGKQMAALPVDPRLARMLITAAAEHCLAELLIIVSVLSIQDPREIGADNRQLAAQKLEQFDHPDSDFLTLVNLWHDYEKRRQQLNQNQLRKYCKAHFLSFMRMREWREVHR 1812
+L+++L CQ+AD+YR RR++R+LE+ QK+ QELA+L A+ S + R AIP I+FP LP++++ +I +LL HQV+VVAGDTGSGKTTQLPK+CL AGLGRRGLIGHTQPRRLAAVSVANRIAEEL T+ G GV +QVRFNE+QS S++LK+MTDGILLAEIQ DRFLNRYEV+I+DEAHERSLNIDFLLGFLKQL +R DLKLIITSATIDV+KF+ HF +APIV V+GRTYPV+ RY P+ A + + D+Q + I ++R I R G D+LVFLS EREIR+TA LRKQR E+LPLYARLR SEQ +IF+PH G RVVLATNVAETSLTVPGI YV+DTG ARISRYSLQSKVQRLPIE +SQASANQRKGRCGRL DGICIRLYSE DF SRP +TDPEI+RTNL SVILRM +L+L E + FPF+E PE AI EG KLL EL+AL ++QLT G+QMA LPVD R ARML+TAA+E CL E+LIIVSVLSIQDPREI ++NRQ A QKL QF HP+SDFL VNLW+ YEK+RQ L+QNQLRKYCK HFLSFMRMREWREVHR
Sbjct: 4 SLQSDLDRCQLADQYRFRRKIRQLEK--AGISAQQKS-------QELAKLTTAMENSIEACEVRATAIPSQISFPSLLPITEKVKEITALLETHQVIVVAGDTGSGKTTQLPKICLQAGLGRRGLIGHTQPRRLAAVSVANRIAEELATQPGEGVGFQVRFNERQSASTFLKLMTDGILLAEIQNDRFLNRYEVIIIDEAHERSLNIDFLLGFLKQLTGKRNDLKLIITSATIDVDKFSSHFHNAPIVSVSGRTYPVDTRYMPLVALNNEEKNDDLQIDGIVTALRHIAASETAARRGPGDVLVFLSSEREIRDTAAELRKQRFTNTEVLPLYARLRHSEQLKIFKPHPGRRVVLATNVAETSLTVPGIRYVVDTGFARISRYSLQSKVQRLPIEAVSQASANQRKGRCGRLEDGICIRLYSETDFDSRPLYTDPEIKRTNLASVILRMLYLKLEEVDDFPFLETPEPSAIREGFKLLAELNALTHKRQLTDIGRQMAMLPVDTRYARMLVTAASERCLREVLIIVSVLSIQDPREISSENRQSALQKLAQFKHPESDFLGFVNLWNHYEKQRQDLSQNQLRKYCKTHFLSFMRMREWREVHR 597
BLAST of mRNA_D-mesarthrocarpus_Contig10553.2.1 vs. uniprot
Match: A0A3C1VQI4_9GAMM (ATP-dependent RNA helicase HrpA (Fragment) n=10 Tax=unclassified Gammaproteobacteria TaxID=33811 RepID=A0A3C1VQI4_9GAMM) HSP 1 Score: 751 bits (1938), Expect = 1.100e-259 Identity = 391/541 (72.27%), Postives = 455/541 (84.10%), Query Frame = 1
Query: 199 QRDAAIPQVINFPEQLPVSQQADKIKSLLAQHQVLVVAGDTGSGKTTQLPKLCLAAGLGRRGLIGHTQPRRLAAVSVANRIAEELGTETGAGVAYQVRFNEKQSPSSYLKVMTDGILLAEIQQDRFLNRYEVLIVDEAHERSLNIDFLLGFLKQLLARRKDLKLIITSATIDVEKFARHFSDAPIVEVAGRTYPVEVRYEPIAADRDSSA-SDVQAEVISDSVRQIL-GEHKQGRG-GDILVFLSGEREIRETAQLLRKQRLPRLEILPLYARLRQSEQTRIFQPHKGVRVVLATNVAETSLTVPGINYVIDTGLARISRYSLQSKVQRLPIEPISQASANQRKGRCGRLADGICIRLYSEADFLSRPEFTDPEIRRTNLGSVILRMKHLRLGEPESFPFIEPPESRAISEGIKLLIELDALDAQQQLTAAGKQMAALPVDPRLARMLITAAAEHCLAELLIIVSVLSIQDPREIGADNRQLAAQKLEQFDHPDSDFLTLVNLWHDYEKRRQQLNQNQLRKYCKAHFLSFMRMREWREVHR 1812
QR AIP I++P +LP S +A ++ L+ +Q+LVVAGDTGSGKTTQLPK+CL AGLGR+GLIGHTQPRRLAA SVANR+AEELG + G GV YQVRF EK SP +YLK+MTDGILLAEIQQDRFLNRYEVLI+DEAHERSLNIDFLLG+LKQLL RR +LKLIITSATIDVEKF+RHFS+API+ V+GRTYPV+VRY P+ + SDV + I ++V++I + +G G GDILVFL+ EREIRETA LRK + EILPLYARLRQSEQ+RIF+PH G R+VL+TNVAETS+TVPGINYVIDTG ARISRYSLQSK+QRLPIEP+SQASANQRKGRCGRLADGICIRLY+E+DF +RPEFTDPEI RTNL SVILRM +LR+GE SFPFIEPPES+AI++G KLL EL+ALDA ++LT AG+QMA LPVDP+ RML+ A A+ CLAE+L+IVS LSIQDPRE+G +NRQ A + +QF H DSDFLTLV LW DYEK+RQ L Q QLRK+CK H LSFMRMREWREVHR
Sbjct: 10 QRMRAIPAQIDYPSELPFSAKASELVELVRDNQILVVAGDTGSGKTTQLPKICLQAGLGRKGLIGHTQPRRLAAASVANRVAEELGAKLGKGVGYQVRFTEKASPETYLKIMTDGILLAEIQQDRFLNRYEVLIIDEAHERSLNIDFLLGYLKQLLTRRPELKLIITSATIDVEKFSRHFSNAPIMTVSGRTYPVDVRYSPLIEKVEGQFYSDVIIQGIVEAVQEIQRSDRSRGSGSGDILVFLATEREIRETALALRKAKFAATEILPLYARLRQSEQSRIFKPHGGRRIVLSTNVAETSITVPGINYVIDTGFARISRYSLQSKIQRLPIEPVSQASANQRKGRCGRLADGICIRLYAESDFNARPEFTDPEILRTNLASVILRMLYLRIGEVGSFPFIEPPESKAINDGFKLLEELNALDAGRKLTRAGRQMATLPVDPKFGRMLVAANAQSCLAEMLVIVSALSIQDPRELGGENRQKAQESQQQFQHADSDFLTLVKLWDDYEKQRQDLTQAQLRKFCKQHHLSFMRMREWREVHR 550
BLAST of mRNA_D-mesarthrocarpus_Contig10553.2.1 vs. uniprot
Match: A0A7Z9MW81_9PROT (ATP-dependent RNA helicase HrpA n=3 Tax=Proteobacteria TaxID=1224 RepID=A0A7Z9MW81_9PROT) HSP 1 Score: 748 bits (1931), Expect = 1.430e-255 Identity = 397/604 (65.73%), Postives = 475/604 (78.64%), Query Frame = 1
Query: 10 DNLEAELVHCQIADEYRLRRQLRKLERREGNTGKNQKAGKNPKLAQELARLEQAISRSRDQVAQRDAAIPQVINFPEQLPVSQQADKIKSLLAQHQVLVVAGDTGSGKTTQLPKLCLAAGLGRRGLIGHTQPRRLAAVSVANRIAEELGTETGAGVAYQVRFNEKQSPSSYLKVMTDGILLAEIQQDRFLNRYEVLIVDEAHERSLNIDFLLGFLKQLLARRKDLKLIITSATIDVEKFARHFSDAPIVEVAGRTYPVEVRYEPIAADR-DSSASDVQAEVISDSVRQILGEHKQGR--GGDILVFLSGEREIRETAQLLRKQRLPRLEILPLYARLRQSEQTRIFQPHKGVRVVLATNVAETSLTVPGINYVIDTGLARISRYSLQSKVQRLPIEPISQASANQRKGRCGRLADGICIRLYSEADFLSRPEFTDPEIRRTNLGSVILRMKHLRLGEPESFPFIEPPESRAISEGIKLLIELDALDAQQQLTAAGKQMAALPVDPRLARMLITAAAEHCLAELLIIVSVLSIQDPREIGADNRQLAAQKLEQFDHPDSDFLTLVNLWHDYEKRRQQLNQNQLRKYCKAHFLSFMRMREWREVHR 1812
+ + +L CQ+ D RLR+++R+LE+ G+ + L L AIS+S+ V QR AAIP I++P LP+S A+KI L+ HQV+VVAGDTGSGKTTQ+PK+CLAAGLGR GLIGHTQPRRLAAVSVANRIAEEL E G GV YQVRFNE S +YLK+MTDGILLAEIQQDRFLN+YE LI+DEAHERSLNIDFLLGFLKQLL+RRKDLKLIITSATIDVEKFA HF +AP+V V+GR YP++ +Y P+ + + + D+Q + I +++ I+ +Q + GD+LVFLS EREIR+TA LRKQ+ +ILPLYARLR SEQ R+F+ H+G R+VLATNVAETS+TVPGINYVIDTGLARISRYS QSKVQRLPIEPISQASANQR+GRCGRLA+GICIRLYSE DF SR EFTDPEI+RTNL SVILRMK L+LG+ E FPF+EPP +AI+EG KLLIEL+AL+ +++LT GK+MA LPVDPR ARM++ A + CL E+LIIVS LSIQDPRE+ +NRQ A QKL +F H DSDFL VNLW YE+ RQ L Q QL+KYCK + LS+MRMREWREVHR
Sbjct: 3 EKMRNQLDTCQLLDRARLRQKIRELEKH---------PGRGDSYRRNLDALTSAISKSQHAVQQRIAAIPTQIDYPAALPISAAAEKISRLIDSHQVVVVAGDTGSGKTTQIPKMCLAAGLGRLGLIGHTQPRRLAAVSVANRIAEELHCELGRGVGYQVRFNETLSSGTYLKLMTDGILLAEIQQDRFLNKYEALIIDEAHERSLNIDFLLGFLKQLLSRRKDLKLIITSATIDVEKFAAHFDNAPVVSVSGRAYPIKTQYRPLNVSKAEMTDEDLQIDAIVSALQGIIISDRQHKRISGDVLVFLSSEREIRDTANKLRKQKFVDTDILPLYARLRHSEQLRVFRAHQGRRIVLATNVAETSITVPGINYVIDTGLARISRYSFQSKVQRLPIEPISQASANQRQGRCGRLAEGICIRLYSEEDFNSRDEFTDPEIKRTNLASVILRMKQLKLGDVELFPFLEPPGQKAINEGFKLLIELNALNPKRELTDCGKKMAQLPVDPRYARMIVLAHEQGCLREILIIVSALSIQDPRELSVENRQQATQKLARFQHVDSDFLGFVNLWDQYERERQDLTQGQLKKYCKTNCLSYMRMREWREVHR 597
BLAST of mRNA_D-mesarthrocarpus_Contig10553.2.1 vs. uniprot
Match: A0A7C7TQG9_9GAMM (ATP-dependent RNA helicase HrpA n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C7TQG9_9GAMM) HSP 1 Score: 739 bits (1907), Expect = 6.240e-252 Identity = 398/603 (66.00%), Postives = 475/603 (78.77%), Query Frame = 1
Query: 10 DNLEAELVHCQIADEYRLRRQLRKLERREGNTGKNQKAGKNPKLAQELARLEQAISRSRDQVAQRDAAIPQVINFPEQLPVSQQADKIKSLLAQHQVLVVAGDTGSGKTTQLPKLCLAAGLGRRGLIGHTQPRRLAAVSVANRIAEELGTETGAGVAYQVRFNEKQSPSSYLKVMTDGILLAEIQQDRFLNRYEVLIVDEAHERSLNIDFLLGFLKQLLARRKDLKLIITSATIDVEKFARHFSDAPIVEVAGRTYPVEVRYEPIAADRDSSASDVQ-AEVISDSVRQILG-EHKQGR-GGDILVFLSGEREIRETAQLLRKQRLPRLEILPLYARLRQSEQTRIFQPHKGVRVVLATNVAETSLTVPGINYVIDTGLARISRYSLQSKVQRLPIEPISQASANQRKGRCGRLADGICIRLYSEADFLSRPEFTDPEIRRTNLGSVILRMKHLRLGEPESFPFIEPPESRAISEGIKLLIELDALDAQQQLTAAGKQMAALPVDPRLARMLITAAAEHCLAELLIIVSVLSIQDPREIGADNRQLAAQKLEQFDHPDSDFLTLVNLWHDYEKRRQQLNQNQLRKYCKAHFLSFMRMREWREVH 1809
++L+ E+ CQ+ D++ R+ L +L R+ + N +A ++ + ++AI S+ R AIP +I E LPVS +A +I L+ +QV+V+AGDTGSGKTTQ+PK+CL AG G+ GLIGHTQPRRLAAVSVANRIAEELGTE G GV YQVRFNEK S S+YLK+MTDGILLAEIQQD+FLNRYEV+I+DEAHERSLNIDFLLGFL QLL +R DLKLIITSATIDVEKF+RHF DAPIV V+GRT+PVEV Y P+ D A D A+ + D+V++I+ +HK+ GDILVFLS EREIRE + LLRKQ L EILPLY+RLR SEQ +IF+PH G R+VL+TNVAETSLTVPGINYVID+G AR+SRYSLQSKVQRLPIE +SQASANQRKGRCGRLA+GICIRLYSE D+ SRPEFTDPEIRRTNL SVILRM HLRLG PE FPF+EPPE +AI+EG KLLIEL+AL ++ LT +G+ MA PVDP+ A ML+ A+ + CLAELLIIVS LSIQDPRE ADNRQ A QKL F+H SDFL+ VNLW YE RRQ +Q QLRK C++++LS+MRMREWREVH
Sbjct: 3 ESLKQEIEQCQLVDQHGFRQTLLRL-RKLKTSSVNTRA--------QIQQFKKAIDSSKQSCDSRILAIPAIIKHQEGLPVSARAAEIVDLIINNQVIVIAGDTGSGKTTQIPKMCLQAGFGKTGLIGHTQPRRLAAVSVANRIAEELGTEPGKGVGYQVRFNEKVSSSTYLKLMTDGILLAEIQQDKFLNRYEVIIIDEAHERSLNIDFLLGFLHQLLQKRLDLKLIITSATIDVEKFSRHFLDAPIVSVSGRTFPVEVNYAPLIKDPSLGAEDDHIAQGVLDAVQEIISHDHKEKEISGDILVFLSSEREIREISVLLRKQHLTNTEILPLYSRLRHSEQIKIFRPHHGRRIVLSTNVAETSLTVPGINYVIDSGFARMSRYSLQSKVQRLPIEVVSQASANQRKGRCGRLANGICIRLYSEEDYNSRPEFTDPEIRRTNLASVILRMFHLRLGAPEDFPFLEPPEQKAINEGFKLLIELNALTPKRALTVSGRLMARFPVDPKFACMLVEASKQSCLAELLIIVSALSIQDPREFNADNRQKAQQKLSVFEHEKSDFLSFVNLWKFYEARRQSSSQAQLRKLCRSNYLSYMRMREWREVH 596
BLAST of mRNA_D-mesarthrocarpus_Contig10553.2.1 vs. uniprot
Match: A0A2A5AF41_9GAMM (ATP-dependent RNA helicase HrpA n=1 Tax=SAR86 cluster bacterium TaxID=2030880 RepID=A0A2A5AF41_9GAMM) HSP 1 Score: 739 bits (1907), Expect = 7.390e-252 Identity = 399/607 (65.73%), Postives = 478/607 (78.75%), Query Frame = 1
Query: 1 TVSDNLEAELVHCQIADEYRLRRQLRKLERREGNTGKNQKAGKNPKLAQELARLEQAISRSRDQVAQRDAAIPQVINFPEQLPVSQQADKIKSLLAQHQVLVVAGDTGSGKTTQLPKLCLAAGLGRRGLIGHTQPRRLAAVSVANRIAEELGTETGAGVAYQVRFNEKQSPSSYLKVMTDGILLAEIQQDRFLNRYEVLIVDEAHERSLNIDFLLGFLKQLLARRKDLKLIITSATIDVEKFARHFSDAPIVEVAGRTYPVEVRYEPIAADR-DSSASDVQAEVISDSVRQIL-GEHKQGRG-GDILVFLSGEREIRETAQLLRKQRLPRLEILPLYARLRQSEQTRIFQPHKGVRVVLATNVAETSLTVPGINYVIDTGLARISRYSLQSKVQRLPIEPISQASANQRKGRCGRLADGICIRLYSEADFLSRPEFTDPEIRRTNLGSVILRMKHLRLGEPESFPFIEPPESRAISEGIKLLIELDALDAQQQLTAAGKQMAALPVDPRLARMLITAAAEHCLAELLIIVSVLSIQDPREIGADNRQLAAQKLEQFDHPDSDFLTLVNLWHDYEKRRQQLNQNQLRKYCKAHFLSFMRMREWREVHR 1812
TV ++L +L CQ+ D++RL +Q+ KL ++E +P+ + LA LEQ IS+S+ R A+IPQ I++P LPVS+ A +I LL + VL+VAGDTGSGKTTQLPK+CL AGLG RGLIGHTQPRRLAA+SVANRI EELGT+ +GV +QVRFN+ + SS+LK+MTDGILLAEIQQDR+LN+YEV+I+DEAHERSLNIDFLLGFLKQLL++R +LKLIITSATIDVEKF+ HF+DAPIV V+GRTYPV+ RY P+ + D + D+Q I +V +I + K G+ GDIL+F S EREIRETA LRKQRL EILPLY RL+ SEQ +IF H G R+VLATNVAETS+TVPGINYVIDTGLARISRYSLQSKVQRLPIE ISQASANQR GRCGR+A+GICIRLYSEADF+SR +FTDPEI RTNL SVILRMK L+LG+ E FPF+E PE +AI+EG KLL+EL+AL LTA G+QMA LPVDPR ARM++ A CL E+L+IVS LSIQDPREI ++NRQ A+QKL Q++H DSDFL V+LW YEK+RQ QLRKYCK +FLSFMRMREWREVHR
Sbjct: 7 TVLNSLRQKLDTCQLVDQHRLGKQIHKLSKKEIT---------DPEFKRGLADLEQGISKSQRACELRRASIPQSISYPSILPVSECAPEIVELLKANPVLIVAGDTGSGKTTQLPKICLQAGLGVRGLIGHTQPRRLAAISVANRIEEELGTQGNSGVGFQVRFNDSTTDSSFLKLMTDGILLAEIQQDRYLNKYEVIIIDEAHERSLNIDFLLGFLKQLLSKRSNLKLIITSATIDVEKFSAHFNDAPIVSVSGRTYPVDTRYAPLIDNASDQADDDLQMNGIMSAVDEIYKSDKKLGKSSGDILIFFSSEREIRETALKLRKQRLNNTEILPLYGRLKHSEQVKIFSSHIGKRIVLATNVAETSITVPGINYVIDTGLARISRYSLQSKVQRLPIEAISQASANQRMGRCGRVANGICIRLYSEADFVSRAQFTDPEITRTNLASVILRMKFLKLGDIEDFPFLEAPEQKAINEGNKLLVELNALTHAGMLTACGRQMATLPVDPRYARMVVIANTMGCLREVLLIVSALSIQDPREISSENRQQASQKLAQYNHSDSDFLAFVSLWDSYEKQRQSSTHGQLRKYCKTNFLSFMRMREWREVHR 604
BLAST of mRNA_D-mesarthrocarpus_Contig10553.2.1 vs. uniprot
Match: A0A2E8XFS8_9GAMM (ATP-dependent RNA helicase HrpA n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E8XFS8_9GAMM) HSP 1 Score: 734 bits (1896), Expect = 2.490e-250 Identity = 381/605 (62.98%), Postives = 487/605 (80.50%), Query Frame = 1
Query: 4 VSDNLEAELVHCQIADEYRLRRQLRKLERREGNTGKNQKAGKNPKLAQELARLEQAISRSRDQVAQRDAAIPQVINFPEQLPVSQQADKIKSLLAQHQVLVVAGDTGSGKTTQLPKLCLAAGLGRRGLIGHTQPRRLAAVSVANRIAEELGTETGAGVAYQVRFNEKQSPSSYLKVMTDGILLAEIQQDRFLNRYEVLIVDEAHERSLNIDFLLGFLKQLLARRKDLKLIITSATIDVEKFARHFSDAPIVEVAGRTYPVEVRYEPIAADRDSSASDVQAEVISDSVRQILGEHKQGR--GGDILVFLSGEREIRETAQLLRKQRLPRLEILPLYARLRQSEQTRIFQPHKGVRVVLATNVAETSLTVPGINYVIDTGLARISRYSLQSKVQRLPIEPISQASANQRKGRCGRLADGICIRLYSEADFLSRPEFTDPEIRRTNLGSVILRMKHLRLGEPESFPFIEPPESRAISEGIKLLIELDALDAQQQLTAAGKQMAALPVDPRLARMLITAAAEHCLAELLIIVSVLSIQDPREIGADNRQLAAQKLEQFDHPDSDFLTLVNLWHDYEKRRQQLNQNQLRKYCKAHFLSFMRMREWREVHR 1812
V ++L+ ++ HCQ AD++RL R++R+LE+ + G QK K K+A E I S+ R AIP+ I FPE+LPVS +A++I+ LL + QVLV+AGDTGSGKTTQ+PK+CL AGLGR+GLIGHTQPRRLA VSVANRIAEEL T+ G GV YQ+RFNE S S+YLK+MTDG+LLAEI +RFLN+Y+V+I+DEAHERSLNIDFLLG+LKQLL +R +LKLIITSATIDVE+F+++F++APIV V+GRT+PV V Y+P+ R+ + Q E I DS+ I+ + ++ GD+LVFLS EREIRETA LLRK++LP E+LPLY+RLRQSEQ +IFQ H G RVVLATNVAETS+TVPGI YVIDTG AR+SRYS+QSK+QRLPIEP+S++SA+QRKGRCGR++ GICIRL+SE D+LSR E+TDPEI+RTNL SVILRM +LRLG+ + FP+I+ PE +AI++G+KLL EL+A+ ++ LT GKQMA LP+DP+LARML+ A++ CL E+LIIVS LSIQDPRE DNRQ A +K F H +SDF +LVNLW+DYE++RQ L+QNQL+K+CK H+LS+MRMREWRE+HR
Sbjct: 3 VLESLKLDIEHCQHADKFRLLRKIRELEKSQXXXG--QKESKIQKIAAE-------IKTSKRSCEIRAVAIPENIQFPEELPVSGKANEIEELLKKQQVLVIAGDTGSGKTTQIPKICLNAGLGRKGLIGHTQPRRLATVSVANRIAEELNTDVGQGVGYQIRFNETISDSTYLKLMTDGVLLAEIPNNRFLNKYDVIIIDEAHERSLNIDFLLGYLKQLLVKRPELKLIITSATIDVEQFSKYFANAPIVSVSGRTFPVNVCYQPLDITREDTQEHQQTEAIIDSLNSIVKKDQERNEISGDVLVFLSSEREIRETATLLRKRKLPHTEVLPLYSRLRQSEQIKIFQTHSGRRVVLATNVAETSITVPGIKYVIDTGFARVSRYSIQSKIQRLPIEPVSRSSADQRKGRCGRVSAGICIRLFSEQDYLSRAEYTDPEIKRTNLASVILRMLYLRLGDIDQFPYIDAPEKKAINDGLKLLTELNAITQKRALTQIGKQMARLPLDPKLARMLVVASSLDCLHEVLIIVSALSIQDPRESSGDNRQQAQEKHAIFAHEESDFNSLVNLWNDYEEKRQSLSQNQLKKHCKTHYLSYMRMREWREIHR 598
BLAST of mRNA_D-mesarthrocarpus_Contig10553.2.1 vs. uniprot
Match: A0A2E1ZJP5_9GAMM (ATP-dependent RNA helicase HrpA n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2E1ZJP5_9GAMM) HSP 1 Score: 725 bits (1872), Expect = 9.640e-247 Identity = 379/602 (62.96%), Postives = 473/602 (78.57%), Query Frame = 1
Query: 13 NLEAELVHCQIADEYRLRRQLRKLERREGNTGKNQKAGKNPKLAQELARLEQAISRSRDQVAQRDAAIPQVINFPEQLPVSQQADKIKSLLAQHQVLVVAGDTGSGKTTQLPKLCLAAGLGRRGLIGHTQPRRLAAVSVANRIAEELGTETGAGVAYQVRFNEKQSPSSYLKVMTDGILLAEIQQDRFLNRYEVLIVDEAHERSLNIDFLLGFLKQLLARRKDLKLIITSATIDVEKFARHFSDAPIVEVAGRTYPVEVRYEPIAADRDSSASDVQAEVISDSVRQILGEHKQGRGG--DILVFLSGEREIRETAQLLRKQRLPRLEILPLYARLRQSEQTRIFQPHKGVRVVLATNVAETSLTVPGINYVIDTGLARISRYSLQSKVQRLPIEPISQASANQRKGRCGRLADGICIRLYSEADFLSRPEFTDPEIRRTNLGSVILRMKHLRLGEPESFPFIEPPESRAISEGIKLLIELDALDAQQQLTAAGKQMAALPVDPRLARMLITAAAEHCLAELLIIVSVLSIQDPREIGADNRQLAAQKLEQFDHPDSDFLTLVNLWHDYEKRRQQLNQNQLRKYCKAHFLSFMRMREWREVHR 1812
+L+ EL CQ +D +R RQ+R LE+ K+ K KL + I S++ +R AIP +I+FP +LP++ + DKI+ LL +QVLV+AGDTGSGKTTQ+PK+CL AG GRRGLIGHTQPRRLA VSVANRIAEEL TE G GV YQ+RFNE S S+YLK+MTDGILLAEIQ D++LN+Y+V+I+DEAHERSLNIDFLLGFLKQLL +R DLKLIITSATID+EKF++HFS APIV V+GRTYPVE RY P+ + A +Q I D++ QI+ + + + G D+LVF S EREIRETA +RK++ E+LPLYARLRQSEQ++IF HKG R++LATNVAETSLTVPGI YVIDTG ARISRYS+QSK+QRLPIEPIS+ASANQR+GRCGR++DG+CIRLYSE DF R ++TD EI+RTNL SVILRM L LG+ E+FP++E PE+++I++G KLL EL+A++ + LTA GK+MA LPVDP+L+RML+ A + CL E+LIIVS LSIQDPRE+ D Q A ++L +F+H DSDFL+LVNLW DYEK+RQ+ QNQL+K+CK HFLSFMRMREWRE+HR
Sbjct: 4 SLKKELDKCQYSDRFRFARQIRNLEK--SKLSKSVFDSKVDKLVAD-------IMDSKNNCQKRARAIPDIIDFPLELPITAEVDKIRQLLTNNQVLVIAGDTGSGKTTQIPKICLQAGFGRRGLIGHTQPRRLATVSVANRIAEELNTEVGDGVGYQIRFNEILSESTYLKLMTDGILLAEIQNDKYLNKYDVIIIDEAHERSLNIDFLLGFLKQLLEKRTDLKLIITSATIDIEKFSQHFSRAPIVSVSGRTYPVETRYLPLEYLEEGLADQLQLNGILDALEQIITKGDKDKKGSEDVLVFFSSEREIRETALAIRKRKFRHCEVLPLYARLRQSEQSKIFSEHKGRRIILATNVAETSLTVPGIKYVIDTGFARISRYSIQSKIQRLPIEPISKASANQRQGRCGRVSDGVCIRLYSEQDFTERADYTDSEIKRTNLASVILRMLSLNLGDIENFPYLEKPETKSINDGFKLLNELNAINQNRGLTAIGKKMAILPVDPKLSRMLVVANTQACLHEVLIIVSALSIQDPRELYGDFSQRAQERLAKFNHQDSDFLSLVNLWADYEKKRQESTQNQLKKHCKTHFLSFMRMREWREIHR 596
BLAST of mRNA_D-mesarthrocarpus_Contig10553.2.1 vs. uniprot
Match: A0A349N641_9GAMM (ATP-dependent RNA helicase HrpA (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A349N641_9GAMM) HSP 1 Score: 696 bits (1797), Expect = 1.850e-244 Identity = 373/604 (61.75%), Postives = 467/604 (77.32%), Query Frame = 1
Query: 10 DNLEAELVHCQIADEYRLRRQLRKLERREGNTGKNQKAGKNPKLAQELARLEQAISRSRDQVAQRDAAIPQVINFPEQLPVSQQADKIKSLLAQHQVLVVAGDTGSGKTTQLPKLCLAAGLGRRGLIGHTQPRRLAAVSVANRIAEELGTETGAGVAYQVRFNEKQSPSSYLKVMTDGILLAEIQQDRFLNRYEVLIVDEAHERSLNIDFLLGFLKQLLARRKDLKLIITSATIDVEKFARHFSDAPIVEVAGRTYPVEVRYEPIAADRDSSASD-VQAEVISDSVRQIL--GEHKQGRGGDILVFLSGEREIRETAQLLRKQRLPRLEILPLYARLRQSEQTRIFQPHKGVRVVLATNVAETSLTVPGINYVIDTGLARISRYSLQSKVQRLPIEPISQASANQRKGRCGRLADGICIRLYSEADFLSRPEFTDPEIRRTNLGSVILRMKHLRLGEPESFPFIEPPESRAISEGIKLLIELDALDAQQQLTAAGKQMAALPVDPRLARMLITAAAEHCLAELLIIVSVLSIQDPREIGADNRQLAAQKLEQFDHPDSDFLTLVNLWHDYEKRRQQLNQNQLRKYCKAHFLSFMRMREWREVHR 1812
++LE+ L Q++D +RL++++RK K + + + Q RL + + +S D+ R IP+V ++P QLPVS +A +I L+ +QV+VVAGDTGSGKTTQLPK+CL AGLGRRG+IGHTQPRRLAA+SVA RIA+ELG G GV QVRF+++ P +YLK+MTDGILLAEIQ DR+L++YE +I+DEAHERSLNIDFLLGFL+ L+ +R DLKLIITSATIDVEKF+ HF APIV V GRT+PVEVRY+P+ +SS +D Q E I ++++IL + GDILVFL EREIR+TA LRK +L L++LPLY RL+ +EQ RIF H RVVLATNVAETS+TVPGINYV+DTG ARISRYSLQSKVQRLPIE ISQASANQRKGRCGR+A+GICIRLYSE DF SRP +TDPEI+RTNL +VILRM L+LG+ E+FPFIE PE++A++EG KLLIEL+A+ A + LT+ G+QMAALP+DPR ARML+ + +CL E+LIIVS LSIQDPRE ++N+Q+A ++ ++ HPDSDF++LV LW YE RQ +Q LRKYCK HFLSFMRMREWREVHR
Sbjct: 31 NSLESILNSVQLSDLHRLQKKVRKFASSLEAPTKEESLTR--EFHQVFERLLEELKKSADKCQLRSKLIPEVQSYPSQLPVSAKACEIAELIRNNQVVVVAGDTGSGKTTQLPKICLDAGLGRRGMIGHTQPRRLAALSVATRIADELGPVAGRGVGSQVRFDDRSGPETYLKLMTDGILLAEIQADRYLSKYEAIIIDEAHERSLNIDFLLGFLRDLIRKRSDLKLIITSATIDVEKFSAHFCGAPIVSVEGRTFPVEVRYKPVLQPEESSRNDDAQTEAIISAIKEILQHDRYSNKNTGDILVFLPTEREIRDTATSLRKAKLGDLDVLPLYGRLQHAEQARIFAAHNTRRVVLATNVAETSITVPGINYVVDTGTARISRYSLQSKVQRLPIEAISQASANQRKGRCGRIANGICIRLYSEQDFDSRPLYTDPEIQRTNLAAVILRMLQLKLGDVENFPFIEMPETKAVNEGHKLLIELNAITASRALTSLGRQMAALPIDPRYARMLLESHKLNCLREVLIIVSGLSIQDPRESNSENKQIAIERQAEYKHPDSDFMSLVKLWDAYEALRQGSSQAMLRKYCKEHFLSFMRMREWREVHR 632
BLAST of mRNA_D-mesarthrocarpus_Contig10553.2.1 vs. uniprot
Match: A0A2D5I704_9GAMM (ATP-dependent RNA helicase HrpA (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2D5I704_9GAMM) HSP 1 Score: 691 bits (1783), Expect = 1.340e-243 Identity = 373/564 (66.13%), Postives = 442/564 (78.37%), Query Frame = 1
Query: 10 DNLEAELVHCQIADEYRLRRQLRKLERREGNTGKNQKAGKNPKLAQELARLEQAISRSRDQVAQRDAAIPQVINFPEQLPVSQQADKIKSLLAQHQVLVVAGDTGSGKTTQLPKLCLAAGLGRRGLIGHTQPRRLAAVSVANRIAEELGTETGAGVAYQVRFNEKQSPSSYLKVMTDGILLAEIQQDRFLNRYEVLIVDEAHERSLNIDFLLGFLKQLLARRKDLKLIITSATIDVEKFARHFSDAPIVEVAGRTYPVEVRYEPIAADRDSSA-SDVQAEVISDSVRQIL-GEHKQGRG-GDILVFLSGEREIRETAQLLRKQRLPRLEILPLYARLRQSEQTRIFQPHKGVRVVLATNVAETSLTVPGINYVIDTGLARISRYSLQSKVQRLPIEPISQASANQRKGRCGRLADGICIRLYSEADFLSRPEFTDPEIRRTNLGSVILRMKHLRLGEPESFPFIEPPESRAISEGIKLLIELDALDAQQQLTAAGKQMAALPVDPRLARMLITAAAEHCLAELLIIVSVLSIQDPREIGADNRQLAAQKLEQFDHPDSDFLTLV 1692
+ L +L CQ +YR R++L+ L + + + K L +L+Q + S+ QR AIP I++P +LP S +A L+ +QVLVVAGDTGSGKTTQLPK+CL AGLGR+GLIGHTQPRRLAA SVANR +EELG E G GV YQVRF EK SP +YLK+MTDGILLAEIQQDR+LNRYEVLI+DEAHERSLNIDFLLG+LKQLL RR +LKLIITSATIDVEKF+RHFS+API+ V+GRTYPV+VRY P+ + D + I +V++I + G G GDILVFL+ EREIRETA LRK +L EILPLYARLRQSEQ RIF+PH G RVVL+TNVAETS+TVPGINYVIDTG ARISRYSLQSK+QRLPIEP+SQASANQRKGRCGRLADGICIRLY+E+DF +RPEFTDPEI RTNL SVILRM HL +GE SFPFIEPPES+AI++G KLL EL+ALDA+++LT AG+Q+A LPVDP+ RML+ A A++CLAE+L+IVS LSIQDPRE+G +NRQ A +QF H DSDFLTLV
Sbjct: 2 EELLTQLSECQSGXQYRFRQRLKSLXAQRDDQSRLDK----------LRKLQQKMKHSQQLCQQRMRAIPAQIDYPSELPFSXKAPXXVXLVRGNQVLVVAGDTGSGKTTQLPKICLQAGLGRKGLIGHTQPRRLAAASVANRXSEELGAELGKGVGYQVRFTEKASPETYLKIMTDGILLAEIQQDRYLNRYEVLIIDEAHERSLNIDFLLGYLKQLLTRRPELKLIITSATIDVEKFSRHFSNAPIITVSGRTYPVDVRYAPLTDKVEGQFYXDXITQGIVXAVQEIQQSDRSXGSGSGDILVFLATEREIRETALALRKAKLAATEILPLYARLRQSEQARIFKPHGGRRVVLSTNVAETSITVPGINYVIDTGFARISRYSLQSKIQRLPIEPVSQASANQRKGRCGRLADGICIRLYTESDFNARPEFTDPEILRTNLASVILRMLHLSIGEVGSFPFIEPPESKAINDGFKLLEELNALDARRKLTRAGRQIATLPVDPKFGRMLVAANAQNCLAEMLVIVSALSIQDPRELGGENRQKAQDSQQQFQHADSDFLTLV 555 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10553.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10553.2.1 >prot_D-mesarthrocarpus_Contig10553.2.1 ID=prot_D-mesarthrocarpus_Contig10553.2.1|Name=mRNA_D-mesarthrocarpus_Contig10553.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=604bp TVSDNLEAELVHCQIADEYRLRRQLRKLERREGNTGKNQKAGKNPKLAQEback to top mRNA from alignment at D-mesarthrocarpus_Contig10553:2441..4252+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10553.2.1 ID=mRNA_D-mesarthrocarpus_Contig10553.2.1|Name=mRNA_D-mesarthrocarpus_Contig10553.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1812bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10553:2441..4252+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10553:2441..4252+ >mRNA_D-mesarthrocarpus_Contig10553.2.1 ID=mRNA_D-mesarthrocarpus_Contig10553.2.1|Name=mRNA_D-mesarthrocarpus_Contig10553.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1812bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10553:2441..4252+ (Discosporangium mesarthrocarpum MT17_79)back to top |