mRNA_D-mesarthrocarpus_Contig10553.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10553.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig10553.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10553.2.1 vs. uniprot
Match: A0A3C0P2Y1_9GAMM (ATP-dependent RNA helicase HrpA n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3C0P2Y1_9GAMM)

HSP 1 Score: 775 bits (2001), Expect = 9.250e-266
Identity = 415/608 (68.26%), Postives = 486/608 (79.93%), Query Frame = 1
Query:    4 VSDNLEAELVHCQIADEYRLRRQLRKLERREGNTGKNQKAGKNP-KLAQELARLEQAISRSRDQVAQRDAAIPQVINFPEQLPVSQQADKIKSLLAQHQVLVVAGDTGSGKTTQLPKLCLAAGLGRRGLIGHTQPRRLAAVSVANRIAEELGTETGAGVAYQVRFNEKQSPSSYLKVMTDGILLAEIQQDRFLNRYEVLIVDEAHERSLNIDFLLGFLKQLLARRKDLKLIITSATIDVEKFARHFSDAPIVEVAGRTYPVEVRYEPIAA-DRDSSASDVQAEVISDSVRQILGEH---KQGRGGDILVFLSGEREIRETAQLLRKQRLPRLEILPLYARLRQSEQTRIFQPHKGVRVVLATNVAETSLTVPGINYVIDTGLARISRYSLQSKVQRLPIEPISQASANQRKGRCGRLADGICIRLYSEADFLSRPEFTDPEIRRTNLGSVILRMKHLRLGEPESFPFIEPPESRAISEGIKLLIELDALDAQQQLTAAGKQMAALPVDPRLARMLITAAAEHCLAELLIIVSVLSIQDPREIGADNRQLAAQKLEQFDHPDSDFLTLVNLWHDYEKRRQQLNQNQLRKYCKAHFLSFMRMREWREVHR 1812
            V  +L+++L  CQ+AD+YR RR++R+LE          KAG +  K  QEL RL +A+  S      R  AIP  I FP  LP++++ ++I +LL  HQV+VVAGDTGSGKTTQLPK+CL AGLGRRGLIGHTQPRRLAAVSVANRIAEEL T+ G GV +QVRFNEKQS SS+LK+MTDGILLAEIQ DRFLNRYEV+I+DEAHERSLNIDFLLGFLKQL  +R DLKLIITSATIDV+KF+ HF +AP+V V+GRTYPV+ RY P+ + + +    D+Q + I  ++R I       KQG G D+LVFLS EREIR+TA +LRKQR   +E+LPLYARLR SEQ +IF+PH G RVVL+TNVAETSLTVPGI YV+DTG ARISRYSLQSKVQRLPIE +SQASANQRKGRCGRL DGICIRLYSE DF SRP +TDPEI+RTNL SVILRM +L+LG+ E FPFIE PE  AI EG KLL+EL+AL   ++LT  G QMA LPVDPR ARML+TA +EHCL E+LIIVSVLSIQDPREI ++NRQ A QKL QF+HP+SDFL  VNLW+ YE +RQ L+QNQLRKYCK HFLSFMRMREWREVHR
Sbjct:   30 VEKSLQSDLDRCQLADQYRFRRKIRQLE----------KAGFSAQKKNQELTRLAKAMEHSIAACETRATAIPSQITFPSLLPITEKVEEITALLETHQVIVVAGDTGSGKTTQLPKICLQAGLGRRGLIGHTQPRRLAAVSVANRIAEELATQPGEGVGFQVRFNEKQSASSFLKLMTDGILLAEIQNDRFLNRYEVIIIDEAHERSLNIDFLLGFLKQLTGKRSDLKLIITSATIDVDKFSSHFHNAPVVSVSGRTYPVDTRYMPLVSLNNEEKNDDLQIDAIVTALRDIAVSETAAKQGPG-DVLVFLSSEREIRDTAAVLRKQRFNNMEVLPLYARLRHSEQLKIFKPHPGRRVVLSTNVAETSLTVPGIRYVVDTGFARISRYSLQSKVQRLPIEAVSQASANQRKGRCGRLEDGICIRLYSETDFDSRPLYTDPEIKRTNLASVILRMLYLKLGDVEDFPFIETPEPSAIREGFKLLVELNALTHNRRLTDIGGQMAMLPVDPRYARMLVTANSEHCLREVLIIVSVLSIQDPREISSENRQAALQKLAQFNHPESDFLGFVNLWNHYETQRQDLSQNQLRKYCKTHFLSFMRMREWREVHR 626          
BLAST of mRNA_D-mesarthrocarpus_Contig10553.2.1 vs. uniprot
Match: A0A2E9JDE2_9GAMM (ATP-dependent RNA helicase HrpA n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E9JDE2_9GAMM)

HSP 1 Score: 767 bits (1980), Expect = 5.730e-263
Identity = 410/603 (67.99%), Postives = 480/603 (79.60%), Query Frame = 1
Query:   13 NLEAELVHCQIADEYRLRRQLRKLERREGNTGKNQKAGKNPKLAQELARLEQAISRSRDQVAQRDAAIPQVINFPEQLPVSQQADKIKSLLAQHQVLVVAGDTGSGKTTQLPKLCLAAGLGRRGLIGHTQPRRLAAVSVANRIAEELGTETGAGVAYQVRFNEKQSPSSYLKVMTDGILLAEIQQDRFLNRYEVLIVDEAHERSLNIDFLLGFLKQLLARRKDLKLIITSATIDVEKFARHFSDAPIVEVAGRTYPVEVRYEPIAA-DRDSSASDVQAEVISDSVRQILGEHKQGRGG--DILVFLSGEREIRETAQLLRKQRLPRLEILPLYARLRQSEQTRIFQPHKGVRVVLATNVAETSLTVPGINYVIDTGLARISRYSLQSKVQRLPIEPISQASANQRKGRCGRLADGICIRLYSEADFLSRPEFTDPEIRRTNLGSVILRMKHLRLGEPESFPFIEPPESRAISEGIKLLIELDALDAQQQLTAAGKQMAALPVDPRLARMLITAAAEHCLAELLIIVSVLSIQDPREIGADNRQLAAQKLEQFDHPDSDFLTLVNLWHDYEKRRQQLNQNQLRKYCKAHFLSFMRMREWREVHR 1812
            +L+++L  CQ+AD+YR RR++R+LE+        QK+       QELA+L  A+  S +    R  AIP  I+FP  LP++++  +I +LL  HQV+VVAGDTGSGKTTQLPK+CL AGLGRRGLIGHTQPRRLAAVSVANRIAEEL T+ G GV +QVRFNE+QS S++LK+MTDGILLAEIQ DRFLNRYEV+I+DEAHERSLNIDFLLGFLKQL  +R DLKLIITSATIDV+KF+ HF +APIV V+GRTYPV+ RY P+ A + +    D+Q + I  ++R I       R G  D+LVFLS EREIR+TA  LRKQR    E+LPLYARLR SEQ +IF+PH G RVVLATNVAETSLTVPGI YV+DTG ARISRYSLQSKVQRLPIE +SQASANQRKGRCGRL DGICIRLYSE DF SRP +TDPEI+RTNL SVILRM +L+L E + FPF+E PE  AI EG KLL EL+AL  ++QLT  G+QMA LPVD R ARML+TAA+E CL E+LIIVSVLSIQDPREI ++NRQ A QKL QF HP+SDFL  VNLW+ YEK+RQ L+QNQLRKYCK HFLSFMRMREWREVHR
Sbjct:    4 SLQSDLDRCQLADQYRFRRKIRQLEK--AGISAQQKS-------QELAKLTTAMENSIEACEVRATAIPSQISFPSLLPITEKVKEITALLETHQVIVVAGDTGSGKTTQLPKICLQAGLGRRGLIGHTQPRRLAAVSVANRIAEELATQPGEGVGFQVRFNERQSASTFLKLMTDGILLAEIQNDRFLNRYEVIIIDEAHERSLNIDFLLGFLKQLTGKRNDLKLIITSATIDVDKFSSHFHNAPIVSVSGRTYPVDTRYMPLVALNNEEKNDDLQIDGIVTALRHIAASETAARRGPGDVLVFLSSEREIRDTAAELRKQRFTNTEVLPLYARLRHSEQLKIFKPHPGRRVVLATNVAETSLTVPGIRYVVDTGFARISRYSLQSKVQRLPIEAVSQASANQRKGRCGRLEDGICIRLYSETDFDSRPLYTDPEIKRTNLASVILRMLYLKLEEVDDFPFLETPEPSAIREGFKLLAELNALTHKRQLTDIGRQMAMLPVDTRYARMLVTAASERCLREVLIIVSVLSIQDPREISSENRQSALQKLAQFKHPESDFLGFVNLWNHYEKQRQDLSQNQLRKYCKTHFLSFMRMREWREVHR 597          
BLAST of mRNA_D-mesarthrocarpus_Contig10553.2.1 vs. uniprot
Match: A0A3C1VQI4_9GAMM (ATP-dependent RNA helicase HrpA (Fragment) n=10 Tax=unclassified Gammaproteobacteria TaxID=33811 RepID=A0A3C1VQI4_9GAMM)

HSP 1 Score: 751 bits (1938), Expect = 1.100e-259
Identity = 391/541 (72.27%), Postives = 455/541 (84.10%), Query Frame = 1
Query:  199 QRDAAIPQVINFPEQLPVSQQADKIKSLLAQHQVLVVAGDTGSGKTTQLPKLCLAAGLGRRGLIGHTQPRRLAAVSVANRIAEELGTETGAGVAYQVRFNEKQSPSSYLKVMTDGILLAEIQQDRFLNRYEVLIVDEAHERSLNIDFLLGFLKQLLARRKDLKLIITSATIDVEKFARHFSDAPIVEVAGRTYPVEVRYEPIAADRDSSA-SDVQAEVISDSVRQIL-GEHKQGRG-GDILVFLSGEREIRETAQLLRKQRLPRLEILPLYARLRQSEQTRIFQPHKGVRVVLATNVAETSLTVPGINYVIDTGLARISRYSLQSKVQRLPIEPISQASANQRKGRCGRLADGICIRLYSEADFLSRPEFTDPEIRRTNLGSVILRMKHLRLGEPESFPFIEPPESRAISEGIKLLIELDALDAQQQLTAAGKQMAALPVDPRLARMLITAAAEHCLAELLIIVSVLSIQDPREIGADNRQLAAQKLEQFDHPDSDFLTLVNLWHDYEKRRQQLNQNQLRKYCKAHFLSFMRMREWREVHR 1812
            QR  AIP  I++P +LP S +A ++  L+  +Q+LVVAGDTGSGKTTQLPK+CL AGLGR+GLIGHTQPRRLAA SVANR+AEELG + G GV YQVRF EK SP +YLK+MTDGILLAEIQQDRFLNRYEVLI+DEAHERSLNIDFLLG+LKQLL RR +LKLIITSATIDVEKF+RHFS+API+ V+GRTYPV+VRY P+    +    SDV  + I ++V++I   +  +G G GDILVFL+ EREIRETA  LRK +    EILPLYARLRQSEQ+RIF+PH G R+VL+TNVAETS+TVPGINYVIDTG ARISRYSLQSK+QRLPIEP+SQASANQRKGRCGRLADGICIRLY+E+DF +RPEFTDPEI RTNL SVILRM +LR+GE  SFPFIEPPES+AI++G KLL EL+ALDA ++LT AG+QMA LPVDP+  RML+ A A+ CLAE+L+IVS LSIQDPRE+G +NRQ A +  +QF H DSDFLTLV LW DYEK+RQ L Q QLRK+CK H LSFMRMREWREVHR
Sbjct:   10 QRMRAIPAQIDYPSELPFSAKASELVELVRDNQILVVAGDTGSGKTTQLPKICLQAGLGRKGLIGHTQPRRLAAASVANRVAEELGAKLGKGVGYQVRFTEKASPETYLKIMTDGILLAEIQQDRFLNRYEVLIIDEAHERSLNIDFLLGYLKQLLTRRPELKLIITSATIDVEKFSRHFSNAPIMTVSGRTYPVDVRYSPLIEKVEGQFYSDVIIQGIVEAVQEIQRSDRSRGSGSGDILVFLATEREIRETALALRKAKFAATEILPLYARLRQSEQSRIFKPHGGRRIVLSTNVAETSITVPGINYVIDTGFARISRYSLQSKIQRLPIEPVSQASANQRKGRCGRLADGICIRLYAESDFNARPEFTDPEILRTNLASVILRMLYLRIGEVGSFPFIEPPESKAINDGFKLLEELNALDAGRKLTRAGRQMATLPVDPKFGRMLVAANAQSCLAEMLVIVSALSIQDPRELGGENRQKAQESQQQFQHADSDFLTLVKLWDDYEKQRQDLTQAQLRKFCKQHHLSFMRMREWREVHR 550          
BLAST of mRNA_D-mesarthrocarpus_Contig10553.2.1 vs. uniprot
Match: A0A7Z9MW81_9PROT (ATP-dependent RNA helicase HrpA n=3 Tax=Proteobacteria TaxID=1224 RepID=A0A7Z9MW81_9PROT)

HSP 1 Score: 748 bits (1931), Expect = 1.430e-255
Identity = 397/604 (65.73%), Postives = 475/604 (78.64%), Query Frame = 1
Query:   10 DNLEAELVHCQIADEYRLRRQLRKLERREGNTGKNQKAGKNPKLAQELARLEQAISRSRDQVAQRDAAIPQVINFPEQLPVSQQADKIKSLLAQHQVLVVAGDTGSGKTTQLPKLCLAAGLGRRGLIGHTQPRRLAAVSVANRIAEELGTETGAGVAYQVRFNEKQSPSSYLKVMTDGILLAEIQQDRFLNRYEVLIVDEAHERSLNIDFLLGFLKQLLARRKDLKLIITSATIDVEKFARHFSDAPIVEVAGRTYPVEVRYEPIAADR-DSSASDVQAEVISDSVRQILGEHKQGR--GGDILVFLSGEREIRETAQLLRKQRLPRLEILPLYARLRQSEQTRIFQPHKGVRVVLATNVAETSLTVPGINYVIDTGLARISRYSLQSKVQRLPIEPISQASANQRKGRCGRLADGICIRLYSEADFLSRPEFTDPEIRRTNLGSVILRMKHLRLGEPESFPFIEPPESRAISEGIKLLIELDALDAQQQLTAAGKQMAALPVDPRLARMLITAAAEHCLAELLIIVSVLSIQDPREIGADNRQLAAQKLEQFDHPDSDFLTLVNLWHDYEKRRQQLNQNQLRKYCKAHFLSFMRMREWREVHR 1812
            + +  +L  CQ+ D  RLR+++R+LE+           G+     + L  L  AIS+S+  V QR AAIP  I++P  LP+S  A+KI  L+  HQV+VVAGDTGSGKTTQ+PK+CLAAGLGR GLIGHTQPRRLAAVSVANRIAEEL  E G GV YQVRFNE  S  +YLK+MTDGILLAEIQQDRFLN+YE LI+DEAHERSLNIDFLLGFLKQLL+RRKDLKLIITSATIDVEKFA HF +AP+V V+GR YP++ +Y P+   + + +  D+Q + I  +++ I+   +Q +   GD+LVFLS EREIR+TA  LRKQ+    +ILPLYARLR SEQ R+F+ H+G R+VLATNVAETS+TVPGINYVIDTGLARISRYS QSKVQRLPIEPISQASANQR+GRCGRLA+GICIRLYSE DF SR EFTDPEI+RTNL SVILRMK L+LG+ E FPF+EPP  +AI+EG KLLIEL+AL+ +++LT  GK+MA LPVDPR ARM++ A  + CL E+LIIVS LSIQDPRE+  +NRQ A QKL +F H DSDFL  VNLW  YE+ RQ L Q QL+KYCK + LS+MRMREWREVHR
Sbjct:    3 EKMRNQLDTCQLLDRARLRQKIRELEKH---------PGRGDSYRRNLDALTSAISKSQHAVQQRIAAIPTQIDYPAALPISAAAEKISRLIDSHQVVVVAGDTGSGKTTQIPKMCLAAGLGRLGLIGHTQPRRLAAVSVANRIAEELHCELGRGVGYQVRFNETLSSGTYLKLMTDGILLAEIQQDRFLNKYEALIIDEAHERSLNIDFLLGFLKQLLSRRKDLKLIITSATIDVEKFAAHFDNAPVVSVSGRAYPIKTQYRPLNVSKAEMTDEDLQIDAIVSALQGIIISDRQHKRISGDVLVFLSSEREIRDTANKLRKQKFVDTDILPLYARLRHSEQLRVFRAHQGRRIVLATNVAETSITVPGINYVIDTGLARISRYSFQSKVQRLPIEPISQASANQRQGRCGRLAEGICIRLYSEEDFNSRDEFTDPEIKRTNLASVILRMKQLKLGDVELFPFLEPPGQKAINEGFKLLIELNALNPKRELTDCGKKMAQLPVDPRYARMIVLAHEQGCLREILIIVSALSIQDPRELSVENRQQATQKLARFQHVDSDFLGFVNLWDQYERERQDLTQGQLKKYCKTNCLSYMRMREWREVHR 597          
BLAST of mRNA_D-mesarthrocarpus_Contig10553.2.1 vs. uniprot
Match: A0A7C7TQG9_9GAMM (ATP-dependent RNA helicase HrpA n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C7TQG9_9GAMM)

HSP 1 Score: 739 bits (1907), Expect = 6.240e-252
Identity = 398/603 (66.00%), Postives = 475/603 (78.77%), Query Frame = 1
Query:   10 DNLEAELVHCQIADEYRLRRQLRKLERREGNTGKNQKAGKNPKLAQELARLEQAISRSRDQVAQRDAAIPQVINFPEQLPVSQQADKIKSLLAQHQVLVVAGDTGSGKTTQLPKLCLAAGLGRRGLIGHTQPRRLAAVSVANRIAEELGTETGAGVAYQVRFNEKQSPSSYLKVMTDGILLAEIQQDRFLNRYEVLIVDEAHERSLNIDFLLGFLKQLLARRKDLKLIITSATIDVEKFARHFSDAPIVEVAGRTYPVEVRYEPIAADRDSSASDVQ-AEVISDSVRQILG-EHKQGR-GGDILVFLSGEREIRETAQLLRKQRLPRLEILPLYARLRQSEQTRIFQPHKGVRVVLATNVAETSLTVPGINYVIDTGLARISRYSLQSKVQRLPIEPISQASANQRKGRCGRLADGICIRLYSEADFLSRPEFTDPEIRRTNLGSVILRMKHLRLGEPESFPFIEPPESRAISEGIKLLIELDALDAQQQLTAAGKQMAALPVDPRLARMLITAAAEHCLAELLIIVSVLSIQDPREIGADNRQLAAQKLEQFDHPDSDFLTLVNLWHDYEKRRQQLNQNQLRKYCKAHFLSFMRMREWREVH 1809
            ++L+ E+  CQ+ D++  R+ L +L R+   +  N +A        ++ + ++AI  S+     R  AIP +I   E LPVS +A +I  L+  +QV+V+AGDTGSGKTTQ+PK+CL AG G+ GLIGHTQPRRLAAVSVANRIAEELGTE G GV YQVRFNEK S S+YLK+MTDGILLAEIQQD+FLNRYEV+I+DEAHERSLNIDFLLGFL QLL +R DLKLIITSATIDVEKF+RHF DAPIV V+GRT+PVEV Y P+  D    A D   A+ + D+V++I+  +HK+    GDILVFLS EREIRE + LLRKQ L   EILPLY+RLR SEQ +IF+PH G R+VL+TNVAETSLTVPGINYVID+G AR+SRYSLQSKVQRLPIE +SQASANQRKGRCGRLA+GICIRLYSE D+ SRPEFTDPEIRRTNL SVILRM HLRLG PE FPF+EPPE +AI+EG KLLIEL+AL  ++ LT +G+ MA  PVDP+ A ML+ A+ + CLAELLIIVS LSIQDPRE  ADNRQ A QKL  F+H  SDFL+ VNLW  YE RRQ  +Q QLRK C++++LS+MRMREWREVH
Sbjct:    3 ESLKQEIEQCQLVDQHGFRQTLLRL-RKLKTSSVNTRA--------QIQQFKKAIDSSKQSCDSRILAIPAIIKHQEGLPVSARAAEIVDLIINNQVIVIAGDTGSGKTTQIPKMCLQAGFGKTGLIGHTQPRRLAAVSVANRIAEELGTEPGKGVGYQVRFNEKVSSSTYLKLMTDGILLAEIQQDKFLNRYEVIIIDEAHERSLNIDFLLGFLHQLLQKRLDLKLIITSATIDVEKFSRHFLDAPIVSVSGRTFPVEVNYAPLIKDPSLGAEDDHIAQGVLDAVQEIISHDHKEKEISGDILVFLSSEREIREISVLLRKQHLTNTEILPLYSRLRHSEQIKIFRPHHGRRIVLSTNVAETSLTVPGINYVIDSGFARMSRYSLQSKVQRLPIEVVSQASANQRKGRCGRLANGICIRLYSEEDYNSRPEFTDPEIRRTNLASVILRMFHLRLGAPEDFPFLEPPEQKAINEGFKLLIELNALTPKRALTVSGRLMARFPVDPKFACMLVEASKQSCLAELLIIVSALSIQDPREFNADNRQKAQQKLSVFEHEKSDFLSFVNLWKFYEARRQSSSQAQLRKLCRSNYLSYMRMREWREVH 596          
BLAST of mRNA_D-mesarthrocarpus_Contig10553.2.1 vs. uniprot
Match: A0A2A5AF41_9GAMM (ATP-dependent RNA helicase HrpA n=1 Tax=SAR86 cluster bacterium TaxID=2030880 RepID=A0A2A5AF41_9GAMM)

HSP 1 Score: 739 bits (1907), Expect = 7.390e-252
Identity = 399/607 (65.73%), Postives = 478/607 (78.75%), Query Frame = 1
Query:    1 TVSDNLEAELVHCQIADEYRLRRQLRKLERREGNTGKNQKAGKNPKLAQELARLEQAISRSRDQVAQRDAAIPQVINFPEQLPVSQQADKIKSLLAQHQVLVVAGDTGSGKTTQLPKLCLAAGLGRRGLIGHTQPRRLAAVSVANRIAEELGTETGAGVAYQVRFNEKQSPSSYLKVMTDGILLAEIQQDRFLNRYEVLIVDEAHERSLNIDFLLGFLKQLLARRKDLKLIITSATIDVEKFARHFSDAPIVEVAGRTYPVEVRYEPIAADR-DSSASDVQAEVISDSVRQIL-GEHKQGRG-GDILVFLSGEREIRETAQLLRKQRLPRLEILPLYARLRQSEQTRIFQPHKGVRVVLATNVAETSLTVPGINYVIDTGLARISRYSLQSKVQRLPIEPISQASANQRKGRCGRLADGICIRLYSEADFLSRPEFTDPEIRRTNLGSVILRMKHLRLGEPESFPFIEPPESRAISEGIKLLIELDALDAQQQLTAAGKQMAALPVDPRLARMLITAAAEHCLAELLIIVSVLSIQDPREIGADNRQLAAQKLEQFDHPDSDFLTLVNLWHDYEKRRQQLNQNQLRKYCKAHFLSFMRMREWREVHR 1812
            TV ++L  +L  CQ+ D++RL +Q+ KL ++E           +P+  + LA LEQ IS+S+     R A+IPQ I++P  LPVS+ A +I  LL  + VL+VAGDTGSGKTTQLPK+CL AGLG RGLIGHTQPRRLAA+SVANRI EELGT+  +GV +QVRFN+  + SS+LK+MTDGILLAEIQQDR+LN+YEV+I+DEAHERSLNIDFLLGFLKQLL++R +LKLIITSATIDVEKF+ HF+DAPIV V+GRTYPV+ RY P+  +  D +  D+Q   I  +V +I   + K G+  GDIL+F S EREIRETA  LRKQRL   EILPLY RL+ SEQ +IF  H G R+VLATNVAETS+TVPGINYVIDTGLARISRYSLQSKVQRLPIE ISQASANQR GRCGR+A+GICIRLYSEADF+SR +FTDPEI RTNL SVILRMK L+LG+ E FPF+E PE +AI+EG KLL+EL+AL     LTA G+QMA LPVDPR ARM++ A    CL E+L+IVS LSIQDPREI ++NRQ A+QKL Q++H DSDFL  V+LW  YEK+RQ     QLRKYCK +FLSFMRMREWREVHR
Sbjct:    7 TVLNSLRQKLDTCQLVDQHRLGKQIHKLSKKEIT---------DPEFKRGLADLEQGISKSQRACELRRASIPQSISYPSILPVSECAPEIVELLKANPVLIVAGDTGSGKTTQLPKICLQAGLGVRGLIGHTQPRRLAAISVANRIEEELGTQGNSGVGFQVRFNDSTTDSSFLKLMTDGILLAEIQQDRYLNKYEVIIIDEAHERSLNIDFLLGFLKQLLSKRSNLKLIITSATIDVEKFSAHFNDAPIVSVSGRTYPVDTRYAPLIDNASDQADDDLQMNGIMSAVDEIYKSDKKLGKSSGDILIFFSSEREIRETALKLRKQRLNNTEILPLYGRLKHSEQVKIFSSHIGKRIVLATNVAETSITVPGINYVIDTGLARISRYSLQSKVQRLPIEAISQASANQRMGRCGRVANGICIRLYSEADFVSRAQFTDPEITRTNLASVILRMKFLKLGDIEDFPFLEAPEQKAINEGNKLLVELNALTHAGMLTACGRQMATLPVDPRYARMVVIANTMGCLREVLLIVSALSIQDPREISSENRQQASQKLAQYNHSDSDFLAFVSLWDSYEKQRQSSTHGQLRKYCKTNFLSFMRMREWREVHR 604          
BLAST of mRNA_D-mesarthrocarpus_Contig10553.2.1 vs. uniprot
Match: A0A2E8XFS8_9GAMM (ATP-dependent RNA helicase HrpA n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E8XFS8_9GAMM)

HSP 1 Score: 734 bits (1896), Expect = 2.490e-250
Identity = 381/605 (62.98%), Postives = 487/605 (80.50%), Query Frame = 1
Query:    4 VSDNLEAELVHCQIADEYRLRRQLRKLERREGNTGKNQKAGKNPKLAQELARLEQAISRSRDQVAQRDAAIPQVINFPEQLPVSQQADKIKSLLAQHQVLVVAGDTGSGKTTQLPKLCLAAGLGRRGLIGHTQPRRLAAVSVANRIAEELGTETGAGVAYQVRFNEKQSPSSYLKVMTDGILLAEIQQDRFLNRYEVLIVDEAHERSLNIDFLLGFLKQLLARRKDLKLIITSATIDVEKFARHFSDAPIVEVAGRTYPVEVRYEPIAADRDSSASDVQAEVISDSVRQILGEHKQGR--GGDILVFLSGEREIRETAQLLRKQRLPRLEILPLYARLRQSEQTRIFQPHKGVRVVLATNVAETSLTVPGINYVIDTGLARISRYSLQSKVQRLPIEPISQASANQRKGRCGRLADGICIRLYSEADFLSRPEFTDPEIRRTNLGSVILRMKHLRLGEPESFPFIEPPESRAISEGIKLLIELDALDAQQQLTAAGKQMAALPVDPRLARMLITAAAEHCLAELLIIVSVLSIQDPREIGADNRQLAAQKLEQFDHPDSDFLTLVNLWHDYEKRRQQLNQNQLRKYCKAHFLSFMRMREWREVHR 1812
            V ++L+ ++ HCQ AD++RL R++R+LE+ +   G  QK  K  K+A E       I  S+     R  AIP+ I FPE+LPVS +A++I+ LL + QVLV+AGDTGSGKTTQ+PK+CL AGLGR+GLIGHTQPRRLA VSVANRIAEEL T+ G GV YQ+RFNE  S S+YLK+MTDG+LLAEI  +RFLN+Y+V+I+DEAHERSLNIDFLLG+LKQLL +R +LKLIITSATIDVE+F+++F++APIV V+GRT+PV V Y+P+   R+ +    Q E I DS+  I+ + ++     GD+LVFLS EREIRETA LLRK++LP  E+LPLY+RLRQSEQ +IFQ H G RVVLATNVAETS+TVPGI YVIDTG AR+SRYS+QSK+QRLPIEP+S++SA+QRKGRCGR++ GICIRL+SE D+LSR E+TDPEI+RTNL SVILRM +LRLG+ + FP+I+ PE +AI++G+KLL EL+A+  ++ LT  GKQMA LP+DP+LARML+ A++  CL E+LIIVS LSIQDPRE   DNRQ A +K   F H +SDF +LVNLW+DYE++RQ L+QNQL+K+CK H+LS+MRMREWRE+HR
Sbjct:    3 VLESLKLDIEHCQHADKFRLLRKIRELEKSQXXXG--QKESKIQKIAAE-------IKTSKRSCEIRAVAIPENIQFPEELPVSGKANEIEELLKKQQVLVIAGDTGSGKTTQIPKICLNAGLGRKGLIGHTQPRRLATVSVANRIAEELNTDVGQGVGYQIRFNETISDSTYLKLMTDGVLLAEIPNNRFLNKYDVIIIDEAHERSLNIDFLLGYLKQLLVKRPELKLIITSATIDVEQFSKYFANAPIVSVSGRTFPVNVCYQPLDITREDTQEHQQTEAIIDSLNSIVKKDQERNEISGDVLVFLSSEREIRETATLLRKRKLPHTEVLPLYSRLRQSEQIKIFQTHSGRRVVLATNVAETSITVPGIKYVIDTGFARVSRYSIQSKIQRLPIEPVSRSSADQRKGRCGRVSAGICIRLFSEQDYLSRAEYTDPEIKRTNLASVILRMLYLRLGDIDQFPYIDAPEKKAINDGLKLLTELNAITQKRALTQIGKQMARLPLDPKLARMLVVASSLDCLHEVLIIVSALSIQDPRESSGDNRQQAQEKHAIFAHEESDFNSLVNLWNDYEEKRQSLSQNQLKKHCKTHYLSYMRMREWREIHR 598          
BLAST of mRNA_D-mesarthrocarpus_Contig10553.2.1 vs. uniprot
Match: A0A2E1ZJP5_9GAMM (ATP-dependent RNA helicase HrpA n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2E1ZJP5_9GAMM)

HSP 1 Score: 725 bits (1872), Expect = 9.640e-247
Identity = 379/602 (62.96%), Postives = 473/602 (78.57%), Query Frame = 1
Query:   13 NLEAELVHCQIADEYRLRRQLRKLERREGNTGKNQKAGKNPKLAQELARLEQAISRSRDQVAQRDAAIPQVINFPEQLPVSQQADKIKSLLAQHQVLVVAGDTGSGKTTQLPKLCLAAGLGRRGLIGHTQPRRLAAVSVANRIAEELGTETGAGVAYQVRFNEKQSPSSYLKVMTDGILLAEIQQDRFLNRYEVLIVDEAHERSLNIDFLLGFLKQLLARRKDLKLIITSATIDVEKFARHFSDAPIVEVAGRTYPVEVRYEPIAADRDSSASDVQAEVISDSVRQILGEHKQGRGG--DILVFLSGEREIRETAQLLRKQRLPRLEILPLYARLRQSEQTRIFQPHKGVRVVLATNVAETSLTVPGINYVIDTGLARISRYSLQSKVQRLPIEPISQASANQRKGRCGRLADGICIRLYSEADFLSRPEFTDPEIRRTNLGSVILRMKHLRLGEPESFPFIEPPESRAISEGIKLLIELDALDAQQQLTAAGKQMAALPVDPRLARMLITAAAEHCLAELLIIVSVLSIQDPREIGADNRQLAAQKLEQFDHPDSDFLTLVNLWHDYEKRRQQLNQNQLRKYCKAHFLSFMRMREWREVHR 1812
            +L+ EL  CQ +D +R  RQ+R LE+      K+    K  KL  +       I  S++   +R  AIP +I+FP +LP++ + DKI+ LL  +QVLV+AGDTGSGKTTQ+PK+CL AG GRRGLIGHTQPRRLA VSVANRIAEEL TE G GV YQ+RFNE  S S+YLK+MTDGILLAEIQ D++LN+Y+V+I+DEAHERSLNIDFLLGFLKQLL +R DLKLIITSATID+EKF++HFS APIV V+GRTYPVE RY P+    +  A  +Q   I D++ QI+ +  + + G  D+LVF S EREIRETA  +RK++    E+LPLYARLRQSEQ++IF  HKG R++LATNVAETSLTVPGI YVIDTG ARISRYS+QSK+QRLPIEPIS+ASANQR+GRCGR++DG+CIRLYSE DF  R ++TD EI+RTNL SVILRM  L LG+ E+FP++E PE+++I++G KLL EL+A++  + LTA GK+MA LPVDP+L+RML+ A  + CL E+LIIVS LSIQDPRE+  D  Q A ++L +F+H DSDFL+LVNLW DYEK+RQ+  QNQL+K+CK HFLSFMRMREWRE+HR
Sbjct:    4 SLKKELDKCQYSDRFRFARQIRNLEK--SKLSKSVFDSKVDKLVAD-------IMDSKNNCQKRARAIPDIIDFPLELPITAEVDKIRQLLTNNQVLVIAGDTGSGKTTQIPKICLQAGFGRRGLIGHTQPRRLATVSVANRIAEELNTEVGDGVGYQIRFNEILSESTYLKLMTDGILLAEIQNDKYLNKYDVIIIDEAHERSLNIDFLLGFLKQLLEKRTDLKLIITSATIDIEKFSQHFSRAPIVSVSGRTYPVETRYLPLEYLEEGLADQLQLNGILDALEQIITKGDKDKKGSEDVLVFFSSEREIRETALAIRKRKFRHCEVLPLYARLRQSEQSKIFSEHKGRRIILATNVAETSLTVPGIKYVIDTGFARISRYSIQSKIQRLPIEPISKASANQRQGRCGRVSDGVCIRLYSEQDFTERADYTDSEIKRTNLASVILRMLSLNLGDIENFPYLEKPETKSINDGFKLLNELNAINQNRGLTAIGKKMAILPVDPKLSRMLVVANTQACLHEVLIIVSALSIQDPRELYGDFSQRAQERLAKFNHQDSDFLSLVNLWADYEKKRQESTQNQLKKHCKTHFLSFMRMREWREIHR 596          
BLAST of mRNA_D-mesarthrocarpus_Contig10553.2.1 vs. uniprot
Match: A0A349N641_9GAMM (ATP-dependent RNA helicase HrpA (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A349N641_9GAMM)

HSP 1 Score: 696 bits (1797), Expect = 1.850e-244
Identity = 373/604 (61.75%), Postives = 467/604 (77.32%), Query Frame = 1
Query:   10 DNLEAELVHCQIADEYRLRRQLRKLERREGNTGKNQKAGKNPKLAQELARLEQAISRSRDQVAQRDAAIPQVINFPEQLPVSQQADKIKSLLAQHQVLVVAGDTGSGKTTQLPKLCLAAGLGRRGLIGHTQPRRLAAVSVANRIAEELGTETGAGVAYQVRFNEKQSPSSYLKVMTDGILLAEIQQDRFLNRYEVLIVDEAHERSLNIDFLLGFLKQLLARRKDLKLIITSATIDVEKFARHFSDAPIVEVAGRTYPVEVRYEPIAADRDSSASD-VQAEVISDSVRQIL--GEHKQGRGGDILVFLSGEREIRETAQLLRKQRLPRLEILPLYARLRQSEQTRIFQPHKGVRVVLATNVAETSLTVPGINYVIDTGLARISRYSLQSKVQRLPIEPISQASANQRKGRCGRLADGICIRLYSEADFLSRPEFTDPEIRRTNLGSVILRMKHLRLGEPESFPFIEPPESRAISEGIKLLIELDALDAQQQLTAAGKQMAALPVDPRLARMLITAAAEHCLAELLIIVSVLSIQDPREIGADNRQLAAQKLEQFDHPDSDFLTLVNLWHDYEKRRQQLNQNQLRKYCKAHFLSFMRMREWREVHR 1812
            ++LE+ L   Q++D +RL++++RK         K +   +  +  Q   RL + + +S D+   R   IP+V ++P QLPVS +A +I  L+  +QV+VVAGDTGSGKTTQLPK+CL AGLGRRG+IGHTQPRRLAA+SVA RIA+ELG   G GV  QVRF+++  P +YLK+MTDGILLAEIQ DR+L++YE +I+DEAHERSLNIDFLLGFL+ L+ +R DLKLIITSATIDVEKF+ HF  APIV V GRT+PVEVRY+P+    +SS +D  Q E I  ++++IL    +     GDILVFL  EREIR+TA  LRK +L  L++LPLY RL+ +EQ RIF  H   RVVLATNVAETS+TVPGINYV+DTG ARISRYSLQSKVQRLPIE ISQASANQRKGRCGR+A+GICIRLYSE DF SRP +TDPEI+RTNL +VILRM  L+LG+ E+FPFIE PE++A++EG KLLIEL+A+ A + LT+ G+QMAALP+DPR ARML+ +   +CL E+LIIVS LSIQDPRE  ++N+Q+A ++  ++ HPDSDF++LV LW  YE  RQ  +Q  LRKYCK HFLSFMRMREWREVHR
Sbjct:   31 NSLESILNSVQLSDLHRLQKKVRKFASSLEAPTKEESLTR--EFHQVFERLLEELKKSADKCQLRSKLIPEVQSYPSQLPVSAKACEIAELIRNNQVVVVAGDTGSGKTTQLPKICLDAGLGRRGMIGHTQPRRLAALSVATRIADELGPVAGRGVGSQVRFDDRSGPETYLKLMTDGILLAEIQADRYLSKYEAIIIDEAHERSLNIDFLLGFLRDLIRKRSDLKLIITSATIDVEKFSAHFCGAPIVSVEGRTFPVEVRYKPVLQPEESSRNDDAQTEAIISAIKEILQHDRYSNKNTGDILVFLPTEREIRDTATSLRKAKLGDLDVLPLYGRLQHAEQARIFAAHNTRRVVLATNVAETSITVPGINYVVDTGTARISRYSLQSKVQRLPIEAISQASANQRKGRCGRIANGICIRLYSEQDFDSRPLYTDPEIQRTNLAAVILRMLQLKLGDVENFPFIEMPETKAVNEGHKLLIELNAITASRALTSLGRQMAALPIDPRYARMLLESHKLNCLREVLIIVSGLSIQDPRESNSENKQIAIERQAEYKHPDSDFMSLVKLWDAYEALRQGSSQAMLRKYCKEHFLSFMRMREWREVHR 632          
BLAST of mRNA_D-mesarthrocarpus_Contig10553.2.1 vs. uniprot
Match: A0A2D5I704_9GAMM (ATP-dependent RNA helicase HrpA (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2D5I704_9GAMM)

HSP 1 Score: 691 bits (1783), Expect = 1.340e-243
Identity = 373/564 (66.13%), Postives = 442/564 (78.37%), Query Frame = 1
Query:   10 DNLEAELVHCQIADEYRLRRQLRKLERREGNTGKNQKAGKNPKLAQELARLEQAISRSRDQVAQRDAAIPQVINFPEQLPVSQQADKIKSLLAQHQVLVVAGDTGSGKTTQLPKLCLAAGLGRRGLIGHTQPRRLAAVSVANRIAEELGTETGAGVAYQVRFNEKQSPSSYLKVMTDGILLAEIQQDRFLNRYEVLIVDEAHERSLNIDFLLGFLKQLLARRKDLKLIITSATIDVEKFARHFSDAPIVEVAGRTYPVEVRYEPIAADRDSSA-SDVQAEVISDSVRQIL-GEHKQGRG-GDILVFLSGEREIRETAQLLRKQRLPRLEILPLYARLRQSEQTRIFQPHKGVRVVLATNVAETSLTVPGINYVIDTGLARISRYSLQSKVQRLPIEPISQASANQRKGRCGRLADGICIRLYSEADFLSRPEFTDPEIRRTNLGSVILRMKHLRLGEPESFPFIEPPESRAISEGIKLLIELDALDAQQQLTAAGKQMAALPVDPRLARMLITAAAEHCLAELLIIVSVLSIQDPREIGADNRQLAAQKLEQFDHPDSDFLTLV 1692
            + L  +L  CQ   +YR R++L+ L  +  +  +  K          L +L+Q +  S+    QR  AIP  I++P +LP S +A     L+  +QVLVVAGDTGSGKTTQLPK+CL AGLGR+GLIGHTQPRRLAA SVANR +EELG E G GV YQVRF EK SP +YLK+MTDGILLAEIQQDR+LNRYEVLI+DEAHERSLNIDFLLG+LKQLL RR +LKLIITSATIDVEKF+RHFS+API+ V+GRTYPV+VRY P+    +     D   + I  +V++I   +   G G GDILVFL+ EREIRETA  LRK +L   EILPLYARLRQSEQ RIF+PH G RVVL+TNVAETS+TVPGINYVIDTG ARISRYSLQSK+QRLPIEP+SQASANQRKGRCGRLADGICIRLY+E+DF +RPEFTDPEI RTNL SVILRM HL +GE  SFPFIEPPES+AI++G KLL EL+ALDA+++LT AG+Q+A LPVDP+  RML+ A A++CLAE+L+IVS LSIQDPRE+G +NRQ A    +QF H DSDFLTLV
Sbjct:    2 EELLTQLSECQSGXQYRFRQRLKSLXAQRDDQSRLDK----------LRKLQQKMKHSQQLCQQRMRAIPAQIDYPSELPFSXKAPXXVXLVRGNQVLVVAGDTGSGKTTQLPKICLQAGLGRKGLIGHTQPRRLAAASVANRXSEELGAELGKGVGYQVRFTEKASPETYLKIMTDGILLAEIQQDRYLNRYEVLIIDEAHERSLNIDFLLGYLKQLLTRRPELKLIITSATIDVEKFSRHFSNAPIITVSGRTYPVDVRYAPLTDKVEGQFYXDXITQGIVXAVQEIQQSDRSXGSGSGDILVFLATEREIRETALALRKAKLAATEILPLYARLRQSEQARIFKPHGGRRVVLSTNVAETSITVPGINYVIDTGFARISRYSLQSKIQRLPIEPVSQASANQRKGRCGRLADGICIRLYTESDFNARPEFTDPEILRTNLASVILRMLHLSIGEVGSFPFIEPPESKAINDGFKLLEELNALDARRKLTRAGRQIATLPVDPKFGRMLVAANAQNCLAEMLVIVSALSIQDPRELGGENRQKAQDSQQQFQHADSDFLTLV 555          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10553.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0P2Y1_9GAMM9.250e-26668.26ATP-dependent RNA helicase HrpA n=1 Tax=Gammaprote... [more]
A0A2E9JDE2_9GAMM5.730e-26367.99ATP-dependent RNA helicase HrpA n=1 Tax=Gammaprote... [more]
A0A3C1VQI4_9GAMM1.100e-25972.27ATP-dependent RNA helicase HrpA (Fragment) n=10 Ta... [more]
A0A7Z9MW81_9PROT1.430e-25565.73ATP-dependent RNA helicase HrpA n=3 Tax=Proteobact... [more]
A0A7C7TQG9_9GAMM6.240e-25266.00ATP-dependent RNA helicase HrpA n=1 Tax=Gammaprote... [more]
A0A2A5AF41_9GAMM7.390e-25265.73ATP-dependent RNA helicase HrpA n=1 Tax=SAR86 clus... [more]
A0A2E8XFS8_9GAMM2.490e-25062.98ATP-dependent RNA helicase HrpA n=1 Tax=Gammaprote... [more]
A0A2E1ZJP5_9GAMM9.640e-24762.96ATP-dependent RNA helicase HrpA n=2 Tax=Gammaprote... [more]
A0A349N641_9GAMM1.850e-24461.75ATP-dependent RNA helicase HrpA (Fragment) n=1 Tax... [more]
A0A2D5I704_9GAMM1.340e-24366.13ATP-dependent RNA helicase HrpA (Fragment) n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10553contigD-mesarthrocarpus_Contig10553:2441..4252 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1027273.GZ77_14730
Preferred namehrpA
PFAMsDEAD,DUF3418,HA2,Helicase_C,OB_NTP_bind
Model size1812
Max annot lvl135619|Oceanospirillales
KEGG koko:K03578
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.06e-223
EggNOG OGsCOG1643@1|root,COG1643@2|Bacteria,1MUEQ@1224|Proteobacteria,1RMU1@1236|Gammaproteobacteria,1XHUD@135619|Oceanospirillales
EC3.6.4.13
DescriptionInvolved in the post-transcriptional processing of the daa operon mRNA, which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain
Cds size1812
COG categoryL
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789192.0869002-CDS-D-mesarthrocarpus_Contig10553:2440..42521680789192.0869002-CDS-D-mesarthrocarpus_Contig10553:2440..4252Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10553 2441..4252 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10553.2.1prot_D-mesarthrocarpus_Contig10553.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10553 2441..4252 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10553.2.1

>prot_D-mesarthrocarpus_Contig10553.2.1 ID=prot_D-mesarthrocarpus_Contig10553.2.1|Name=mRNA_D-mesarthrocarpus_Contig10553.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=604bp
TVSDNLEAELVHCQIADEYRLRRQLRKLERREGNTGKNQKAGKNPKLAQE
LARLEQAISRSRDQVAQRDAAIPQVINFPEQLPVSQQADKIKSLLAQHQV
LVVAGDTGSGKTTQLPKLCLAAGLGRRGLIGHTQPRRLAAVSVANRIAEE
LGTETGAGVAYQVRFNEKQSPSSYLKVMTDGILLAEIQQDRFLNRYEVLI
VDEAHERSLNIDFLLGFLKQLLARRKDLKLIITSATIDVEKFARHFSDAP
IVEVAGRTYPVEVRYEPIAADRDSSASDVQAEVISDSVRQILGEHKQGRG
GDILVFLSGEREIRETAQLLRKQRLPRLEILPLYARLRQSEQTRIFQPHK
GVRVVLATNVAETSLTVPGINYVIDTGLARISRYSLQSKVQRLPIEPISQ
ASANQRKGRCGRLADGICIRLYSEADFLSRPEFTDPEIRRTNLGSVILRM
KHLRLGEPESFPFIEPPESRAISEGIKLLIELDALDAQQQLTAAGKQMAA
LPVDPRLARMLITAAAEHCLAELLIIVSVLSIQDPREIGADNRQLAAQKL
EQFDHPDSDFLTLVNLWHDYEKRRQQLNQNQLRKYCKAHFLSFMRMREWR
EVHR
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mRNA from alignment at D-mesarthrocarpus_Contig10553:2441..4252+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10553.2.1 ID=mRNA_D-mesarthrocarpus_Contig10553.2.1|Name=mRNA_D-mesarthrocarpus_Contig10553.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1812bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10553:2441..4252+ (Discosporangium mesarthrocarpum MT17_79)
ACCGTGAGCGATAACCTGGAAGCAGAACTGGTGCACTGTCAGATTGCTGA CGAGTACCGTTTGCGTCGGCAATTGCGCAAGCTGGAGCGTCGAGAGGGCA ATACCGGGAAAAACCAGAAAGCCGGCAAGAACCCAAAGCTGGCCCAGGAA CTGGCCAGGCTGGAGCAAGCGATTTCCCGTTCCCGCGATCAGGTCGCGCA ACGCGACGCGGCGATTCCCCAGGTCATCAACTTCCCTGAACAGCTGCCGG TCAGTCAGCAGGCAGACAAGATCAAGTCGCTACTGGCGCAACACCAGGTA TTGGTAGTGGCTGGGGATACCGGCTCGGGCAAAACCACCCAGCTTCCGAA ACTTTGCCTGGCTGCCGGTCTTGGGCGCCGCGGCCTCATTGGTCACACTC AGCCACGTCGTCTCGCCGCGGTCTCCGTCGCTAACCGTATTGCCGAAGAG CTGGGCACTGAAACCGGTGCCGGCGTGGCTTACCAGGTTCGCTTTAATGA GAAGCAGTCACCCAGCAGCTACCTGAAGGTGATGACCGACGGTATCCTGC TGGCTGAAATCCAGCAGGACCGGTTCCTGAATCGCTACGAAGTACTGATC GTCGATGAGGCACACGAGCGCTCGCTGAACATCGACTTCCTGTTGGGATT TCTCAAACAGCTGCTTGCCCGCCGCAAGGATCTGAAGCTGATCATCACCT CGGCCACCATTGATGTTGAGAAGTTTGCGCGGCATTTCTCGGATGCTCCC ATTGTCGAAGTTGCGGGCCGTACCTATCCGGTGGAAGTGCGCTACGAACC GATTGCGGCCGACCGCGACTCATCCGCCAGCGATGTCCAGGCTGAGGTGA TCAGCGACAGCGTTCGCCAGATTCTCGGTGAACACAAGCAGGGGCGGGGT GGAGATATCCTGGTGTTTCTCAGCGGTGAGCGGGAAATCCGTGAGACTGC CCAGCTGTTGCGAAAACAGCGGCTGCCTCGGCTGGAAATTCTGCCACTTT ATGCACGACTTCGGCAAAGTGAGCAAACCCGGATATTTCAGCCCCATAAA GGCGTACGGGTCGTGCTGGCCACCAATGTCGCGGAAACCTCGCTGACGGT ACCCGGCATCAACTATGTGATCGACACCGGACTGGCCAGAATCAGCCGCT ACAGCCTGCAGAGCAAAGTGCAGCGCCTGCCTATCGAGCCAATATCCCAG GCCAGTGCAAATCAGCGCAAGGGGCGCTGCGGGCGCCTCGCGGACGGCAT CTGTATCCGCCTGTACAGCGAGGCCGATTTCCTGTCGCGACCGGAATTCA CCGATCCGGAGATCCGGCGCACGAATCTCGGGTCCGTGATCCTGCGCATG AAGCATCTGCGCCTGGGCGAGCCCGAGTCCTTTCCCTTTATTGAGCCACC TGAATCCAGAGCGATCAGCGAAGGCATCAAACTGCTGATTGAGCTTGATG CTCTTGATGCGCAGCAACAGTTGACTGCCGCTGGCAAGCAGATGGCGGCC TTGCCGGTAGACCCCCGACTGGCGCGCATGCTGATCACGGCGGCCGCCGA GCATTGCCTGGCCGAACTGCTGATTATCGTCAGCGTACTGAGTATTCAGG ACCCGCGTGAGATAGGTGCGGATAACCGTCAGCTGGCGGCACAGAAGCTG GAACAATTTGATCATCCCGATTCGGATTTTCTTACCCTGGTCAATCTCTG GCATGACTATGAAAAGCGCCGTCAGCAACTCAACCAGAATCAATTGCGCA AATACTGCAAAGCGCATTTTCTGTCTTTTATGCGGATGCGCGAATGGCGG GAAGTGCATCGC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10553:2441..4252+

>mRNA_D-mesarthrocarpus_Contig10553.2.1 ID=mRNA_D-mesarthrocarpus_Contig10553.2.1|Name=mRNA_D-mesarthrocarpus_Contig10553.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1812bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10553:2441..4252+ (Discosporangium mesarthrocarpum MT17_79)
ACCGTGAGCGATAACCTGGAAGCAGAACTGGTGCACTGTCAGATTGCTGA
CGAGTACCGTTTGCGTCGGCAATTGCGCAAGCTGGAGCGTCGAGAGGGCA
ATACCGGGAAAAACCAGAAAGCCGGCAAGAACCCAAAGCTGGCCCAGGAA
CTGGCCAGGCTGGAGCAAGCGATTTCCCGTTCCCGCGATCAGGTCGCGCA
ACGCGACGCGGCGATTCCCCAGGTCATCAACTTCCCTGAACAGCTGCCGG
TCAGTCAGCAGGCAGACAAGATCAAGTCGCTACTGGCGCAACACCAGGTA
TTGGTAGTGGCTGGGGATACCGGCTCGGGCAAAACCACCCAGCTTCCGAA
ACTTTGCCTGGCTGCCGGTCTTGGGCGCCGCGGCCTCATTGGTCACACTC
AGCCACGTCGTCTCGCCGCGGTCTCCGTCGCTAACCGTATTGCCGAAGAG
CTGGGCACTGAAACCGGTGCCGGCGTGGCTTACCAGGTTCGCTTTAATGA
GAAGCAGTCACCCAGCAGCTACCTGAAGGTGATGACCGACGGTATCCTGC
TGGCTGAAATCCAGCAGGACCGGTTCCTGAATCGCTACGAAGTACTGATC
GTCGATGAGGCACACGAGCGCTCGCTGAACATCGACTTCCTGTTGGGATT
TCTCAAACAGCTGCTTGCCCGCCGCAAGGATCTGAAGCTGATCATCACCT
CGGCCACCATTGATGTTGAGAAGTTTGCGCGGCATTTCTCGGATGCTCCC
ATTGTCGAAGTTGCGGGCCGTACCTATCCGGTGGAAGTGCGCTACGAACC
GATTGCGGCCGACCGCGACTCATCCGCCAGCGATGTCCAGGCTGAGGTGA
TCAGCGACAGCGTTCGCCAGATTCTCGGTGAACACAAGCAGGGGCGGGGT
GGAGATATCCTGGTGTTTCTCAGCGGTGAGCGGGAAATCCGTGAGACTGC
CCAGCTGTTGCGAAAACAGCGGCTGCCTCGGCTGGAAATTCTGCCACTTT
ATGCACGACTTCGGCAAAGTGAGCAAACCCGGATATTTCAGCCCCATAAA
GGCGTACGGGTCGTGCTGGCCACCAATGTCGCGGAAACCTCGCTGACGGT
ACCCGGCATCAACTATGTGATCGACACCGGACTGGCCAGAATCAGCCGCT
ACAGCCTGCAGAGCAAAGTGCAGCGCCTGCCTATCGAGCCAATATCCCAG
GCCAGTGCAAATCAGCGCAAGGGGCGCTGCGGGCGCCTCGCGGACGGCAT
CTGTATCCGCCTGTACAGCGAGGCCGATTTCCTGTCGCGACCGGAATTCA
CCGATCCGGAGATCCGGCGCACGAATCTCGGGTCCGTGATCCTGCGCATG
AAGCATCTGCGCCTGGGCGAGCCCGAGTCCTTTCCCTTTATTGAGCCACC
TGAATCCAGAGCGATCAGCGAAGGCATCAAACTGCTGATTGAGCTTGATG
CTCTTGATGCGCAGCAACAGTTGACTGCCGCTGGCAAGCAGATGGCGGCC
TTGCCGGTAGACCCCCGACTGGCGCGCATGCTGATCACGGCGGCCGCCGA
GCATTGCCTGGCCGAACTGCTGATTATCGTCAGCGTACTGAGTATTCAGG
ACCCGCGTGAGATAGGTGCGGATAACCGTCAGCTGGCGGCACAGAAGCTG
GAACAATTTGATCATCCCGATTCGGATTTTCTTACCCTGGTCAATCTCTG
GCATGACTATGAAAAGCGCCGTCAGCAACTCAACCAGAATCAATTGCGCA
AATACTGCAAAGCGCATTTTCTGTCTTTTATGCGGATGCGCGAATGGCGG
GAAGTGCATCGC
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