mRNA_D-mesarthrocarpus_Contig1055.1.2 (mRNA) Discosporangium mesarthrocarpum MT17_79
|
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1055.1.2 vs. uniprot
Match: A0A6H5KKK1_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK1_9PHAE) HSP 1 Score: 127 bits (320), Expect = 2.220e-28 Identity = 120/402 (29.85%), Postives = 180/402 (44.78%), Query Frame = 1
Query: 1 AFVQPEIAVELYMRLPPGCGDWSDKTGPLYRARYGLEQASTTWGMHLTNELTALGFEQCLSDTWVFRCFLGRRLS*HWLITLMTCLWSA------MLVSAMPXXXSRTTCSLRRT*AS*SGTQGVRSHGIDTQEGSR*PNSVHRTNM*ALFCHHYEPYPCCPIT*ALAATGPRGGV*GEV*STDRCATL------------GGQHAPAGHC*FSTRSDQAYAGTFQDTLEG*SEGA*VSSDDT*LGCPLPENRTDEALCLLTPRMVEMRMTT--VLFWGCRMFAGSAVAWFSRTQQAVALAGTEAECMAMGESTVSRKYLE--IRSALSGVEDNTMWVCEDNMEAINMAENPSSSARSKHVDVRHHFLRQLVQDRVIEILPTPTNSQHADILTKPLGESLFK 1140
AFVQ E+ E++M+LPPGCG S K L ++ YGL+QAS T+ L +EL +GFEQ +SD V R +G + I + L++ ++V+A+ S T +L G VR T E S+ S R+ + P P + G G+V + +L A A H S +++ Q L E A ++ P+N D + + + + + A V W S+TQ+ V+ + +EAE +AMG+ ++ ++ + + V EDN AI +AENP SS+RSKH+DVRHHFLR L ++ VIE+ P+ QHADILTK L LF+
Sbjct: 564 AFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYAGTKSLAEVVVAAL--GDSLPTKNLGEV-RFFLGCAFVRDREAGTIEMSQ--ESYIRSVLERFNVCRTSSIPASPTNDYRSVMEDEGA--GDVPFREVVGSLMWIANQTRPDISNAVRAVARH---SHEPKKSHWKAAQKILNYLLETAHLTLKFK------PDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKALPRDLFE 949
BLAST of mRNA_D-mesarthrocarpus_Contig1055.1.2 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE) HSP 1 Score: 127 bits (320), Expect = 2.460e-28 Identity = 120/402 (29.85%), Postives = 180/402 (44.78%), Query Frame = 1
Query: 1 AFVQPEIAVELYMRLPPGCGDWSDKTGPLYRARYGLEQASTTWGMHLTNELTALGFEQCLSDTWVFRCFLGRRLS*HWLITLMTCLWSA------MLVSAMPXXXSRTTCSLRRT*AS*SGTQGVRSHGIDTQEGSR*PNSVHRTNM*ALFCHHYEPYPCCPIT*ALAATGPRGGV*GEV*STDRCATL------------GGQHAPAGHC*FSTRSDQAYAGTFQDTLEG*SEGA*VSSDDT*LGCPLPENRTDEALCLLTPRMVEMRMTT--VLFWGCRMFAGSAVAWFSRTQQAVALAGTEAECMAMGESTVSRKYLE--IRSALSGVEDNTMWVCEDNMEAINMAENPSSSARSKHVDVRHHFLRQLVQDRVIEILPTPTNSQHADILTKPLGESLFK 1140
AFVQ E+ E++M+LPPGCG S K L ++ YGL+QAS T+ L +EL +GFEQ +SD V R +G + I + L++ ++V+A+ S T +L G VR T E S+ S R+ + P P + G G+V + +L A A H S +++ Q L E A ++ P+N D + + + + + A V W S+TQ+ V+ + +EAE +AMG+ ++ ++ + + V EDN AI +AENP SS+RSKH+DVRHHFLR L ++ VIE+ P+ QHADILTK L LF+
Sbjct: 831 AFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYAGTKSLAEVVVAAL--GDSLPTKNLGEV-RFFLGCAFVRDREAGTIEMSQ--ESYIRSVLERFNVCRTSSIPASPTNDYRSVMEDEGA--GDVPFREVVGSLMWIANQTRPDISNAVRAVARH---SHEPKKSHWKAAQKILNYLLETAHLTLKFK------PDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKALPRDLFE 1216
BLAST of mRNA_D-mesarthrocarpus_Contig1055.1.2 vs. uniprot
Match: A0A6H5JV80_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV80_9PHAE) HSP 1 Score: 125 bits (313), Expect = 1.450e-27 Identity = 120/398 (30.15%), Postives = 177/398 (44.47%), Query Frame = 1
Query: 1 AFVQPEIAVELYMRLPPGCGDWSDKTGPLYRARYGLEQASTTWGMHLTNELTALGFEQCLSDTWVFRCFLGRRLS*HWLITLMTCLWSA------MLVSAMPXXXSRTTCSLRRT*AS*SGTQGVRSHGIDTQEGSR*PNSVHRTNM*ALFCHHYEPYPCCPIT*AL-------AATGPRGGV*G---EV*STDRCATLGGQHAPAGHC*FSTRSDQAYAGTFQDTLEG*SEGA*VSSDDT*LGC-PLPENRTDEALCLLTPRMVEMRMTTVLFWGCRMFAGSAVAWFSRTQQAVALAGTEAECMAMGESTVSRKYLE--IRSALSGVEDNTMWVCEDNMEAINMAENPSSSARSKHVDVRHHFLRQLVQDRVIEILPTPTNSQHADILTKPLGESLF 1137
AF Q ++ E+ M+LPPGC S K L ++ YGL+QAS T+ L ++L +GFEQ LSD V R +G + I + L++ ++V A+ R + ++ + I+ + S + + R N+ C P P + A P V G + + R T A H +SD A L+ + DT + L D A R V + V AG V+WFS TQ+ V+L+ +EAE +AMG+ ++ ++ + + V EDN AI +AENP SS+RSKH+DVRHHFLR L ++ VIE+ P+ QHADILTK L +LF
Sbjct: 329 AFFQSKLDHEVLMKLPPGCDSMSGKIVRLNKSLYGLKQASRTFYKRLVSDLLRIGFEQSLSDPCVLRFMMGDEVMGIIAIHVDDILYAGTKRLAEVIVEALGDSLPTKNLGEVRFFLGCAFSRDREAGTIEISQESYIRSVLERFNI----CRT-SSIPASPANDSRSVMEDEEAGDVPFREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYKQDTTVDVGTLVYVDADFASKATDRRSVSGALVLV--------AGCLVSWFSWTQKCVSLSTSEAEYIAMGDGVKEALFVNGMLQLLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRNLF 713
BLAST of mRNA_D-mesarthrocarpus_Contig1055.1.2 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE) HSP 1 Score: 125 bits (314), Expect = 1.530e-27 Identity = 121/409 (29.58%), Postives = 183/409 (44.74%), Query Frame = 1
Query: 1 AFVQPEIAVELYMRLPPGCGDWSDKTGPLYRARYGLEQASTTWGMHLTNELTALGFEQCLSDTWVFRCFLGRRLS*HWLITLMTCLWSA------MLVSAMPXXXSRTTCSLRRT*AS*SGTQGVRSHGIDTQEGSR*------------------PNSVHRTNM*ALFCHHYEPYPCCPIT*ALA--ATGPRGGV*GEV*STDRCATLGGQHAPA-GHC*FSTRSDQAYAGTFQDTLEG*SEGA*VSSDDT*LGCPLPENRTDEALCLLTPRMVEMRMTTVLFWGCRMFAGSAVAWFSRTQQAVALAGTEAECMAMGESTVSRKYLE--IRSALSGVEDNTMWVCEDNMEAINMAENPSSSARSKHVDVRHHFLRQLVQDRVIEILPTPTNSQHADILTKPLGESLFK 1140
AFVQ E+ E++M++PPGCG S+K L ++ YGL+QAS T+ L +EL +GFEQ +SD V R +G + I + L++ ++V+A+ S T +L G + +R T E S+ P S++ + + P + +L A+ R + V + R + H P H + + T TL+ + + + TD R V M V A V W SRTQ+ V+ + +EAE +AMG+ ++ ++ V+ + V EDN AI +AENP SS+RSKH+DVRHHFLR L ++ VIE+ P+ QHADILTK L LF+
Sbjct: 1005 AFVQSELDHEVFMKMPPGCGSMSEKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYAGTKSLAEVVVAAL--GDSLPTKNLGEV-KFFLGCEYIRDRKAGTIEISQESYIRSVLERFNIVRTSSIPASLNNDDRSLMEEEGAGDVPFREVVGSLMWIASQTRADISNAVRAVARHS-----HEPKKSHWKAAQKILNYLLETAHLTLKFKRDSSVDVGTLVYVDADFASKATDR-------RSVSGAMVFV--------AAMLVVWISRTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSVKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRDLFE 1390
BLAST of mRNA_D-mesarthrocarpus_Contig1055.1.2 vs. uniprot
Match: A0A6H5JRE7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRE7_9PHAE) HSP 1 Score: 120 bits (300), Expect = 7.390e-27 Identity = 117/388 (30.15%), Postives = 171/388 (44.07%), Query Frame = 1
Query: 37 MRLPPGCGDWSDKTGPLYRARYGLEQASTTWGMHLTNELTALGFEQCLSDTWVFRCFLGRRLS*HWLITLMTCLWSA------MLVSAMPXXXSRTTCSLRRT*AS*SGTQGVRSHGIDTQEGSR*PNSVHRTNM*ALFCHHYEPYPCCPIT*AL-------AATGPRGGV*G---EV*STDRCATLGGQHAPAGHC*FSTRSDQAYAGTFQDTLEG*SEGA*VSSDDT*LGC-PLPENRTDEALCLLTPRMVEMRMTTVLFWGCRMFAGSAVAWFSRTQQAVALAGTEAECMAMGESTVSRKYLE--IRSALSGVEDNTMWVCEDNMEAINMAENPSSSARSKHVDVRHHFLRQLVQDRVIEILPTPTNSQHADILTKPLGESLFKF 1143
M+LPPGC S K L ++ YGL+QAS T L ++L +GFEQ LSD V R +G + + I + L++ ++V A+ R ++ + I+ + S N + R N+ C P P + A P V G + + R T A H +SD A L+ + DT + L D A R V + V+ G V+WFS TQ+ V+L+ +EAE +AMG+ ++ ++ + + V EDN AI +AENP SS+RSKH+DVRHHFLR L ++ VIE+ P+ QHADILTK L +LF+F
Sbjct: 1 MKLPPGCDSMSGKIVRLNKSLYGLKQASRTSYKRLVSDLLWIGFEQSLSDPCVLRFMMGDEVMGIFAIHVDDILYAGTKRLAEVIVEALGDSLPTKNLGEVRFFLGCEISRDREAGTIEISQESYIRNVLERFNI----CRT-SSIPASPANDSRSVMEDEEAGDVPFREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYKQDTTVDVGTLVYVDADFASKATDRRSVSGALVLVV--------GCLVSWFSWTQKCVSLSTSEAEYIAMGDGVKEAFFVNGMLQFLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRNLFEF 375
BLAST of mRNA_D-mesarthrocarpus_Contig1055.1.2 vs. uniprot
Match: A0A6H5JCD8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCD8_9PHAE) HSP 1 Score: 121 bits (303), Expect = 3.810e-26 Identity = 124/416 (29.81%), Postives = 174/416 (41.83%), Query Frame = 1
Query: 1 AFVQPEIAVELYMRLPPGCGDWSDKTGPLYRARYGLEQASTTWGMHLTNELTALGFEQCLSDTWVFRCF---------------------------LGRRLS*HWLITLMTCLWSAMLVSAMPXXXSRTTCSLRRT*AS*SGTQGVRSHGIDTQEGSR*PNSVHRTNM*ALFCHHYEPYPCCPIT*ALAATGPRGGV*GEV*STDRCATLGGQHAP-------AGHC*FSTRSDQAYAGTFQ-DTLEG*SEGA*VSSDDT*LGCPLPENRTDEALCLLTPRMVEMRMTTVLFWGCRMFAGSAVAWFSRTQQAVALAGTEAECMAMGESTVSRKYLE-IRSALSGVEDNTMWVC-EDNMEAINMAENPSSSARSKHVDVRHHFLRQLVQDRVIEILPTPTNSQHADILTKPLGESLF 1137
AFVQ E+ +Y+RLP GCG S K L R+ YGL+QAS TW HL + LGFEQC +D V R GR L+ + IT + L + T ++T A T V G+ + + V A EP+ A R + V + R + +AP A H R +AY T Q T G S V SD + + R + G M AGS V++FSRTQ++V L+ TEAE AM + +L + S +S D V EDN+ A+++A NP+++ SKH+DVRHHF+R+ V +++ P++ QHAD LTKPL + F
Sbjct: 719 AFVQSELVECVYLRLPQGCGALSGKIVRLRRSLYGLKQASRTWHKHLVRGMKCLGFEQCAADACVMRLIEEGVVAMVVVVHVDDIFSIGKKSRCEQFGRDLNEYVPITNLGELRLYAGIRFSRDFAQGTITLSQQTYA----TNMVAKFGVTRNKETPMAVGVKLEEFDACEPDVEEPFRSLVGHLMWLANQTRPDILNAVRAVARYS-----YAPKSVHWKAALHMVMYIRCTRAYGITLQRGTAGGVSLEVYVDSD-------------------YASKATDRRSVS---GGVVMCAGSCVSFFSRTQKSVTLSSTEAEYAAMADGMKEAIFLRYLWSFISPDGDVGCTVIKEDNVGALHLANNPATTPNSKHIDVRHHFIRERVDRGEFKVVYVPSHLQHADFLTKPLPKEAF 1103
BLAST of mRNA_D-mesarthrocarpus_Contig1055.1.2 vs. uniprot
Match: A0A6H5L3I1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3I1_9PHAE) HSP 1 Score: 121 bits (303), Expect = 3.900e-26 Identity = 119/409 (29.10%), Postives = 182/409 (44.50%), Query Frame = 1
Query: 1 AFVQPEIAVELYMRLPPGCGDWSDKTGPLYRARYGLEQASTTWGMHLTNELTALGFEQCLSDTWVFRCFLGRRLS*HWLITLMTCLWSA------MLVSAMPXXXSRTTCSLRRT*AS*SGTQGVRSHGIDTQEGSR*------------------PNSVHRTNM*ALFCHHYEPYPCCPIT*ALA--ATGPRGGV*GEV*STDRCATLGGQHAPA-GHC*FSTRSDQAYAGTFQDTLEG*SEGA*VSSDDT*LGCPLPENRTDEALCLLTPRMVEMRMTTVLFWGCRMFAGSAVAWFSRTQQAVALAGTEAECMAMGESTVSRKYLE--IRSALSGVEDNTMWVCEDNMEAINMAENPSSSARSKHVDVRHHFLRQLVQDRVIEILPTPTNSQHADILTKPLGESLFK 1140
AFVQ E+ E++M++PPGCG S+K L ++ YGL+QAS T+ L +EL +GFEQ +SD V +G + I + L++ ++V+A+ S T +L G + +R T E S+ P S++ + + P + +L A+ R + V + R + H P H + + T TL+ + + + TD R V M V A V W SRTQ+ V+ + +E+E +AMG+ ++ ++ V+ + V EDN AI +AENP SS+RSKH+DVRHHFLR L ++ VIE+ P+ QHADILTK L LF+
Sbjct: 795 AFVQSELDHEVFMKMPPGCGSMSEKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLCFMMGDEVVGMVAIHVDDILYAGTKSLAEVVVAAL--GDSLPTKNLGEV-KFFLGCEYIRDRKAGTIEISQESYIRSVLERFNIVRTSSIPASLNNDDRSLMEEEGAGDVPFREVVGSLMWIASQTRADISNAVRAVARHS-----HEPKKSHWKAAQKILNYLLETAHLTLKFKRDSSVDVGTLVYVDADFASKATDR-------RSVSGAMVFV--------AAMLVVWISRTQKCVSQSTSESEYLAMGDGVKEALFVNGMLQFLRPSVKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRDLFE 1180
BLAST of mRNA_D-mesarthrocarpus_Contig1055.1.2 vs. uniprot
Match: A0A6H5K9B2_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9B2_9PHAE) HSP 1 Score: 119 bits (299), Expect = 1.120e-25 Identity = 121/400 (30.25%), Postives = 176/400 (44.00%), Query Frame = 1
Query: 1 AFVQPEIAVELYMRLPPGCGDWSDKTGPLYRARYGLEQASTTWGMHLTNELTALGFEQCLSDTWVFRCFLGRRLS*HWLITLMTCLWSA------MLVSAMPXXXSRTTCSLRRT*AS*SGTQGVRSHGIDTQEGSR*PNSVHRTNM*ALFCHHYEPYPCCPIT*AL--------AATGPRGGV*GE---V*STDRCATLGGQHAPAGHC*FSTRSD-QAYAGTFQDTLEG*SEGA*VSSDDT*LGCPLPENRTDEALCLLTPRMVEMRMTTVLFWGCRMFAGSAVAWFSRTQQAVALAGTEAECMAMGESTVSRKYLE--IRSALSGVEDNTMWVCEDNMEAINMAENPSSSARSKHVDVRHHFLRQLVQDRVIEILPTPTNSQHADILTKPLGESLFK 1140
AFVQ E+ E++M+LPPGCG S K L ++ Y L+Q S T+ L +EL +GFEQ +SD V R +G + I + L++ ++V+A+ S T +L G + +R T+E S+ S R+ + P P A P V G + + RC A A + D +A LE D++ L D A R V + V A V W S+TQ+ V+ + +EAE +AMG+ ++ ++ + + V EDN AI +AENP SS+RSKH+DVRHHFLR L ++ VIE+ P+ QHADILTK L LF+
Sbjct: 98 AFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYELKQESRTFYNRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYAGTKSLAEVVVAAL--GDSLPTKNLGEV-KFFLGCEYIRDREAGTKEISQ--ESYIRSVLDKFNVCSTSSTPASPANDNNRSLKEDEGAKDVPFREVVGSLMWIANRTRCDINIATRAVARQSHNPKKRDWKASQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLV--------ASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKALPRDLFE 484
BLAST of mRNA_D-mesarthrocarpus_Contig1055.1.2 vs. uniprot
Match: A0A6H5KJP2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJP2_9PHAE) HSP 1 Score: 116 bits (291), Expect = 1.630e-25 Identity = 111/386 (28.76%), Postives = 162/386 (41.97%), Query Frame = 1
Query: 1 AFVQPEIAVELYMRLPPGCGDWSDKTGPLYRARYGLEQASTTWGMHLTNELTALGFEQCLSDTWVFRCFLGRRLS*HWLITLMTCLWSAMLVSAMPXXXSRTTCSLRRT*AS*SGTQGVRSHGIDTQEGSR*PNSVHRTNM*ALFCHHYEPYPCCPIT*ALAATGPRGGV*GEV*STDR-CATLGGQH--APAGHC*FSTRSDQAYAGTFQDTLEG*SEGA*VSSDDT*LGCPLPENRTDEALCLLTPRMVEMRMTTVLFWGCRMFAGSAVAWFSRTQQAVALAGTEAECMAMGESTVSRKYLEIRSA----LSGVEDNTMWVCEDNMEAINMAENPSSSARSKHVDVRHHFLRQLVQDRVIEILPTPTNSQHADILTKPLGESLF 1137
AFVQ E+ +++MRLP GCG S LY++ YGL+QAS W HLT L LGF QCL+D VFR + ++ + +W A T V D E + R + +L AT R + V + R CA+ H A G + R+ + + G S V +D+ + + R + G M G V WFSRTQ+ V L+ TE E +A+ + V ++ L +R L + + + V EDN AI +A NP +++ SKH+DVRHHF+R+LV+ + I I + QHAD LTK + + F
Sbjct: 43 AFVQSELEDDVFMRLPQGCGRLSGLIVKLYKSLYGLKQASRQWHAHLTKCLLLLGFVQCLADACVFRLMEDGCVIMIIVVHVGFLMWLA--------------------------TXPVSVKLTDFDENEACADVPFRELVGSLM---------------WLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADNA-------------------SKAADRRSVS---GGVVMCGGGGVTWFSRTQKCVTLSTTEVEYVAIAD--VLKEVLFLRQVWRLMLLDADMSCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAISKESF 363
BLAST of mRNA_D-mesarthrocarpus_Contig1055.1.2 vs. uniprot
Match: A0A6H5JH25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH25_9PHAE) HSP 1 Score: 119 bits (298), Expect = 1.810e-25 Identity = 121/391 (30.95%), Postives = 174/391 (44.50%), Query Frame = 1
Query: 28 ELYMRLPPGCGDWSDKTGP-LYRARYGLEQASTTWGMHLTNELTALGFEQCLSDTWVFRCFLGRRLS*HWLITLMTCLWSA------MLVSAMPXXXSRTTCSLRRT*AS*SGTQGVRSHGIDTQEGSR*PNSVHRTNM*ALFCHHYEPYPCCPIT*AL-------AATGPRGGV*G---EV*STDRCATLGGQHAPAGHC*FSTRSDQAYAGTFQDTLEG*SEGA*VSSDDT*LGC-PLPENRTDEALCLLTPRMVEMRMTTVLFWGCRMFAGSAVAWFSRTQQAVALAGTEAECMAMGESTVSRKYLE--IRSALSGVEDNTMWVCEDNMEAINMAENPSSSARSKHVDVRHHFLRQLVQDRVIEILPTPTNSQHADILTKPLGESLFK 1140
E++M+LPPGC S K L ++ YGL+QAS T+ L ++L +GFEQ LSD V R +G + I + L++ ++V A+ S T +L + G R T E S+ S R+ + P P + A P V G + + R T A H +SD A L+ + DT + L D A R V + V AG V+WFS TQ+ V+L+ +EAE +AMG+ ++ ++ + + V EDN AI +AENP SS+RSKH+DVRHHFLR L ++ VIE+ P+ QHADILTK L +LF+
Sbjct: 892 EVFMKLPPGCDSMSGKKNVRLNKSLYGLKQASRTFYKRLVSDLLRIGFEQSLSDPCVLRFMMGDEVMGIIAIHVDDILYAGTKRLAEVIVEAL--GDSLPTKNLGKV-IFFLGCAFSRDREAGTIEISQ--ESYIRSVLERFNISRTSSIPASPANDSRSVMEDEEAGDVPFREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQRILSNLKETAHLTLKYKQDTTVDVGTLVYVDADFASKATDRRSVSGALVLV--------AGCLVSWFSWTQKCVSLSTSEAEYIAMGDGVKEALFVNGMLQFLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRNLFE 1269 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1055.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1055.1.2 >prot_D-mesarthrocarpus_Contig1055.1.2 ID=prot_D-mesarthrocarpus_Contig1055.1.2|Name=mRNA_D-mesarthrocarpus_Contig1055.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=141bp MVEMRMTTVLFWGCRMFAGSAVAWFSRTQQAVALAGTEAECMAMGESTVSback to top mRNA from alignment at D-mesarthrocarpus_Contig1055:472..1643- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig1055.1.2 ID=mRNA_D-mesarthrocarpus_Contig1055.1.2|Name=mRNA_D-mesarthrocarpus_Contig1055.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1172bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1055:472..1643- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1055:472..1643- >mRNA_D-mesarthrocarpus_Contig1055.1.2 ID=mRNA_D-mesarthrocarpus_Contig1055.1.2|Name=mRNA_D-mesarthrocarpus_Contig1055.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=423bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1055:472..1643- (Discosporangium mesarthrocarpum MT17_79)back to top |