mRNA_D-mesarthrocarpus_Contig1055.1.2 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig1055.1.2
Unique NamemRNA_D-mesarthrocarpus_Contig1055.1.2
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1055.1.2 vs. uniprot
Match: A0A6H5KKK1_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK1_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 2.220e-28
Identity = 120/402 (29.85%), Postives = 180/402 (44.78%), Query Frame = 1
Query:    1 AFVQPEIAVELYMRLPPGCGDWSDKTGPLYRARYGLEQASTTWGMHLTNELTALGFEQCLSDTWVFRCFLGRRLS*HWLITLMTCLWSA------MLVSAMPXXXSRTTCSLRRT*AS*SGTQGVRSHGIDTQEGSR*PNSVHRTNM*ALFCHHYEPYPCCPIT*ALAATGPRGGV*GEV*STDRCATL------------GGQHAPAGHC*FSTRSDQAYAGTFQDTLEG*SEGA*VSSDDT*LGCPLPENRTDEALCLLTPRMVEMRMTT--VLFWGCRMFAGSAVAWFSRTQQAVALAGTEAECMAMGESTVSRKYLE--IRSALSGVEDNTMWVCEDNMEAINMAENPSSSARSKHVDVRHHFLRQLVQDRVIEILPTPTNSQHADILTKPLGESLFK 1140
            AFVQ E+  E++M+LPPGCG  S K   L ++ YGL+QAS T+   L +EL  +GFEQ +SD  V R  +G  +     I +   L++       ++V+A+    S  T +L        G   VR     T E S+   S  R+ +           P  P     +     G   G+V   +   +L                A A H   S    +++    Q  L    E A ++          P+N  D +  +        +      +     + A   V W S+TQ+ V+ + +EAE +AMG+      ++   ++      +   + V EDN  AI +AENP SS+RSKH+DVRHHFLR L ++ VIE+   P+  QHADILTK L   LF+
Sbjct:  564 AFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYAGTKSLAEVVVAAL--GDSLPTKNLGEV-RFFLGCAFVRDREAGTIEMSQ--ESYIRSVLERFNVCRTSSIPASPTNDYRSVMEDEGA--GDVPFREVVGSLMWIANQTRPDISNAVRAVARH---SHEPKKSHWKAAQKILNYLLETAHLTLKFK------PDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKALPRDLFE 949          
BLAST of mRNA_D-mesarthrocarpus_Contig1055.1.2 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 2.460e-28
Identity = 120/402 (29.85%), Postives = 180/402 (44.78%), Query Frame = 1
Query:    1 AFVQPEIAVELYMRLPPGCGDWSDKTGPLYRARYGLEQASTTWGMHLTNELTALGFEQCLSDTWVFRCFLGRRLS*HWLITLMTCLWSA------MLVSAMPXXXSRTTCSLRRT*AS*SGTQGVRSHGIDTQEGSR*PNSVHRTNM*ALFCHHYEPYPCCPIT*ALAATGPRGGV*GEV*STDRCATL------------GGQHAPAGHC*FSTRSDQAYAGTFQDTLEG*SEGA*VSSDDT*LGCPLPENRTDEALCLLTPRMVEMRMTT--VLFWGCRMFAGSAVAWFSRTQQAVALAGTEAECMAMGESTVSRKYLE--IRSALSGVEDNTMWVCEDNMEAINMAENPSSSARSKHVDVRHHFLRQLVQDRVIEILPTPTNSQHADILTKPLGESLFK 1140
            AFVQ E+  E++M+LPPGCG  S K   L ++ YGL+QAS T+   L +EL  +GFEQ +SD  V R  +G  +     I +   L++       ++V+A+    S  T +L        G   VR     T E S+   S  R+ +           P  P     +     G   G+V   +   +L                A A H   S    +++    Q  L    E A ++          P+N  D +  +        +      +     + A   V W S+TQ+ V+ + +EAE +AMG+      ++   ++      +   + V EDN  AI +AENP SS+RSKH+DVRHHFLR L ++ VIE+   P+  QHADILTK L   LF+
Sbjct:  831 AFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYAGTKSLAEVVVAAL--GDSLPTKNLGEV-RFFLGCAFVRDREAGTIEMSQ--ESYIRSVLERFNVCRTSSIPASPTNDYRSVMEDEGA--GDVPFREVVGSLMWIANQTRPDISNAVRAVARH---SHEPKKSHWKAAQKILNYLLETAHLTLKFK------PDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKALPRDLFE 1216          
BLAST of mRNA_D-mesarthrocarpus_Contig1055.1.2 vs. uniprot
Match: A0A6H5JV80_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV80_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 1.450e-27
Identity = 120/398 (30.15%), Postives = 177/398 (44.47%), Query Frame = 1
Query:    1 AFVQPEIAVELYMRLPPGCGDWSDKTGPLYRARYGLEQASTTWGMHLTNELTALGFEQCLSDTWVFRCFLGRRLS*HWLITLMTCLWSA------MLVSAMPXXXSRTTCSLRRT*AS*SGTQGVRSHGIDTQEGSR*PNSVHRTNM*ALFCHHYEPYPCCPIT*AL-------AATGPRGGV*G---EV*STDRCATLGGQHAPAGHC*FSTRSDQAYAGTFQDTLEG*SEGA*VSSDDT*LGC-PLPENRTDEALCLLTPRMVEMRMTTVLFWGCRMFAGSAVAWFSRTQQAVALAGTEAECMAMGESTVSRKYLE--IRSALSGVEDNTMWVCEDNMEAINMAENPSSSARSKHVDVRHHFLRQLVQDRVIEILPTPTNSQHADILTKPLGESLF 1137
            AF Q ++  E+ M+LPPGC   S K   L ++ YGL+QAS T+   L ++L  +GFEQ LSD  V R  +G  +     I +   L++       ++V A+            R     + ++   +  I+  + S   + + R N+    C      P  P   +        A   P   V G    + +  R  T       A H     +SD   A      L+  +        DT +    L     D A      R V   +  V        AG  V+WFS TQ+ V+L+ +EAE +AMG+      ++   ++      +   + V EDN  AI +AENP SS+RSKH+DVRHHFLR L ++ VIE+   P+  QHADILTK L  +LF
Sbjct:  329 AFFQSKLDHEVLMKLPPGCDSMSGKIVRLNKSLYGLKQASRTFYKRLVSDLLRIGFEQSLSDPCVLRFMMGDEVMGIIAIHVDDILYAGTKRLAEVIVEALGDSLPTKNLGEVRFFLGCAFSRDREAGTIEISQESYIRSVLERFNI----CRT-SSIPASPANDSRSVMEDEEAGDVPFREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYKQDTTVDVGTLVYVDADFASKATDRRSVSGALVLV--------AGCLVSWFSWTQKCVSLSTSEAEYIAMGDGVKEALFVNGMLQLLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRNLF 713          
BLAST of mRNA_D-mesarthrocarpus_Contig1055.1.2 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 1.530e-27
Identity = 121/409 (29.58%), Postives = 183/409 (44.74%), Query Frame = 1
Query:    1 AFVQPEIAVELYMRLPPGCGDWSDKTGPLYRARYGLEQASTTWGMHLTNELTALGFEQCLSDTWVFRCFLGRRLS*HWLITLMTCLWSA------MLVSAMPXXXSRTTCSLRRT*AS*SGTQGVRSHGIDTQEGSR*------------------PNSVHRTNM*ALFCHHYEPYPCCPIT*ALA--ATGPRGGV*GEV*STDRCATLGGQHAPA-GHC*FSTRSDQAYAGTFQDTLEG*SEGA*VSSDDT*LGCPLPENRTDEALCLLTPRMVEMRMTTVLFWGCRMFAGSAVAWFSRTQQAVALAGTEAECMAMGESTVSRKYLE--IRSALSGVEDNTMWVCEDNMEAINMAENPSSSARSKHVDVRHHFLRQLVQDRVIEILPTPTNSQHADILTKPLGESLFK 1140
            AFVQ E+  E++M++PPGCG  S+K   L ++ YGL+QAS T+   L +EL  +GFEQ +SD  V R  +G  +     I +   L++       ++V+A+    S  T +L        G + +R     T E S+                   P S++  +   +        P   +  +L   A+  R  +   V +  R +     H P   H   + +       T   TL+   + +        +        TD        R V   M  V        A   V W SRTQ+ V+ + +EAE +AMG+      ++   ++     V+   + V EDN  AI +AENP SS+RSKH+DVRHHFLR L ++ VIE+   P+  QHADILTK L   LF+
Sbjct: 1005 AFVQSELDHEVFMKMPPGCGSMSEKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYAGTKSLAEVVVAAL--GDSLPTKNLGEV-KFFLGCEYIRDRKAGTIEISQESYIRSVLERFNIVRTSSIPASLNNDDRSLMEEEGAGDVPFREVVGSLMWIASQTRADISNAVRAVARHS-----HEPKKSHWKAAQKILNYLLETAHLTLKFKRDSSVDVGTLVYVDADFASKATDR-------RSVSGAMVFV--------AAMLVVWISRTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSVKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRDLFE 1390          
BLAST of mRNA_D-mesarthrocarpus_Contig1055.1.2 vs. uniprot
Match: A0A6H5JRE7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRE7_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 7.390e-27
Identity = 117/388 (30.15%), Postives = 171/388 (44.07%), Query Frame = 1
Query:   37 MRLPPGCGDWSDKTGPLYRARYGLEQASTTWGMHLTNELTALGFEQCLSDTWVFRCFLGRRLS*HWLITLMTCLWSA------MLVSAMPXXXSRTTCSLRRT*AS*SGTQGVRSHGIDTQEGSR*PNSVHRTNM*ALFCHHYEPYPCCPIT*AL-------AATGPRGGV*G---EV*STDRCATLGGQHAPAGHC*FSTRSDQAYAGTFQDTLEG*SEGA*VSSDDT*LGC-PLPENRTDEALCLLTPRMVEMRMTTVLFWGCRMFAGSAVAWFSRTQQAVALAGTEAECMAMGESTVSRKYLE--IRSALSGVEDNTMWVCEDNMEAINMAENPSSSARSKHVDVRHHFLRQLVQDRVIEILPTPTNSQHADILTKPLGESLFKF 1143
            M+LPPGC   S K   L ++ YGL+QAS T    L ++L  +GFEQ LSD  V R  +G  +   + I +   L++       ++V A+            R       ++   +  I+  + S   N + R N+    C      P  P   +        A   P   V G    + +  R  T       A H     +SD   A      L+  +        DT +    L     D A      R V   +  V+        G  V+WFS TQ+ V+L+ +EAE +AMG+      ++   ++      +   + V EDN  AI +AENP SS+RSKH+DVRHHFLR L ++ VIE+   P+  QHADILTK L  +LF+F
Sbjct:    1 MKLPPGCDSMSGKIVRLNKSLYGLKQASRTSYKRLVSDLLWIGFEQSLSDPCVLRFMMGDEVMGIFAIHVDDILYAGTKRLAEVIVEALGDSLPTKNLGEVRFFLGCEISRDREAGTIEISQESYIRNVLERFNI----CRT-SSIPASPANDSRSVMEDEEAGDVPFREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYKQDTTVDVGTLVYVDADFASKATDRRSVSGALVLVV--------GCLVSWFSWTQKCVSLSTSEAEYIAMGDGVKEAFFVNGMLQFLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRNLFEF 375          
BLAST of mRNA_D-mesarthrocarpus_Contig1055.1.2 vs. uniprot
Match: A0A6H5JCD8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCD8_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 3.810e-26
Identity = 124/416 (29.81%), Postives = 174/416 (41.83%), Query Frame = 1
Query:    1 AFVQPEIAVELYMRLPPGCGDWSDKTGPLYRARYGLEQASTTWGMHLTNELTALGFEQCLSDTWVFRCF---------------------------LGRRLS*HWLITLMTCLWSAMLVSAMPXXXSRTTCSLRRT*AS*SGTQGVRSHGIDTQEGSR*PNSVHRTNM*ALFCHHYEPYPCCPIT*ALAATGPRGGV*GEV*STDRCATLGGQHAP-------AGHC*FSTRSDQAYAGTFQ-DTLEG*SEGA*VSSDDT*LGCPLPENRTDEALCLLTPRMVEMRMTTVLFWGCRMFAGSAVAWFSRTQQAVALAGTEAECMAMGESTVSRKYLE-IRSALSGVEDNTMWVC-EDNMEAINMAENPSSSARSKHVDVRHHFLRQLVQDRVIEILPTPTNSQHADILTKPLGESLF 1137
            AFVQ E+   +Y+RLP GCG  S K   L R+ YGL+QAS TW  HL   +  LGFEQC +D  V R                              GR L+ +  IT +  L     +         T    ++T A    T  V   G+   + +     V      A      EP+          A   R  +   V +  R +     +AP       A H     R  +AY  T Q  T  G S    V SD                      +  + R  +    G  M AGS V++FSRTQ++V L+ TEAE  AM +      +L  + S +S   D    V  EDN+ A+++A NP+++  SKH+DVRHHF+R+ V     +++  P++ QHAD LTKPL +  F
Sbjct:  719 AFVQSELVECVYLRLPQGCGALSGKIVRLRRSLYGLKQASRTWHKHLVRGMKCLGFEQCAADACVMRLIEEGVVAMVVVVHVDDIFSIGKKSRCEQFGRDLNEYVPITNLGELRLYAGIRFSRDFAQGTITLSQQTYA----TNMVAKFGVTRNKETPMAVGVKLEEFDACEPDVEEPFRSLVGHLMWLANQTRPDILNAVRAVARYS-----YAPKSVHWKAALHMVMYIRCTRAYGITLQRGTAGGVSLEVYVDSD-------------------YASKATDRRSVS---GGVVMCAGSCVSFFSRTQKSVTLSSTEAEYAAMADGMKEAIFLRYLWSFISPDGDVGCTVIKEDNVGALHLANNPATTPNSKHIDVRHHFIRERVDRGEFKVVYVPSHLQHADFLTKPLPKEAF 1103          
BLAST of mRNA_D-mesarthrocarpus_Contig1055.1.2 vs. uniprot
Match: A0A6H5L3I1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3I1_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 3.900e-26
Identity = 119/409 (29.10%), Postives = 182/409 (44.50%), Query Frame = 1
Query:    1 AFVQPEIAVELYMRLPPGCGDWSDKTGPLYRARYGLEQASTTWGMHLTNELTALGFEQCLSDTWVFRCFLGRRLS*HWLITLMTCLWSA------MLVSAMPXXXSRTTCSLRRT*AS*SGTQGVRSHGIDTQEGSR*------------------PNSVHRTNM*ALFCHHYEPYPCCPIT*ALA--ATGPRGGV*GEV*STDRCATLGGQHAPA-GHC*FSTRSDQAYAGTFQDTLEG*SEGA*VSSDDT*LGCPLPENRTDEALCLLTPRMVEMRMTTVLFWGCRMFAGSAVAWFSRTQQAVALAGTEAECMAMGESTVSRKYLE--IRSALSGVEDNTMWVCEDNMEAINMAENPSSSARSKHVDVRHHFLRQLVQDRVIEILPTPTNSQHADILTKPLGESLFK 1140
            AFVQ E+  E++M++PPGCG  S+K   L ++ YGL+QAS T+   L +EL  +GFEQ +SD  V    +G  +     I +   L++       ++V+A+    S  T +L        G + +R     T E S+                   P S++  +   +        P   +  +L   A+  R  +   V +  R +     H P   H   + +       T   TL+   + +        +        TD        R V   M  V        A   V W SRTQ+ V+ + +E+E +AMG+      ++   ++     V+   + V EDN  AI +AENP SS+RSKH+DVRHHFLR L ++ VIE+   P+  QHADILTK L   LF+
Sbjct:  795 AFVQSELDHEVFMKMPPGCGSMSEKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLCFMMGDEVVGMVAIHVDDILYAGTKSLAEVVVAAL--GDSLPTKNLGEV-KFFLGCEYIRDRKAGTIEISQESYIRSVLERFNIVRTSSIPASLNNDDRSLMEEEGAGDVPFREVVGSLMWIASQTRADISNAVRAVARHS-----HEPKKSHWKAAQKILNYLLETAHLTLKFKRDSSVDVGTLVYVDADFASKATDR-------RSVSGAMVFV--------AAMLVVWISRTQKCVSQSTSESEYLAMGDGVKEALFVNGMLQFLRPSVKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRDLFE 1180          
BLAST of mRNA_D-mesarthrocarpus_Contig1055.1.2 vs. uniprot
Match: A0A6H5K9B2_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9B2_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 1.120e-25
Identity = 121/400 (30.25%), Postives = 176/400 (44.00%), Query Frame = 1
Query:    1 AFVQPEIAVELYMRLPPGCGDWSDKTGPLYRARYGLEQASTTWGMHLTNELTALGFEQCLSDTWVFRCFLGRRLS*HWLITLMTCLWSA------MLVSAMPXXXSRTTCSLRRT*AS*SGTQGVRSHGIDTQEGSR*PNSVHRTNM*ALFCHHYEPYPCCPIT*AL--------AATGPRGGV*GE---V*STDRCATLGGQHAPAGHC*FSTRSD-QAYAGTFQDTLEG*SEGA*VSSDDT*LGCPLPENRTDEALCLLTPRMVEMRMTTVLFWGCRMFAGSAVAWFSRTQQAVALAGTEAECMAMGESTVSRKYLE--IRSALSGVEDNTMWVCEDNMEAINMAENPSSSARSKHVDVRHHFLRQLVQDRVIEILPTPTNSQHADILTKPLGESLFK 1140
            AFVQ E+  E++M+LPPGCG  S K   L ++ Y L+Q S T+   L +EL  +GFEQ +SD  V R  +G  +     I +   L++       ++V+A+    S  T +L        G + +R     T+E S+   S  R+ +           P  P             A   P   V G    + +  RC       A A       + D +A        LE          D++     L     D A      R V   +  V        A   V W S+TQ+ V+ + +EAE +AMG+      ++   ++      +   + V EDN  AI +AENP SS+RSKH+DVRHHFLR L ++ VIE+   P+  QHADILTK L   LF+
Sbjct:   98 AFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYELKQESRTFYNRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYAGTKSLAEVVVAAL--GDSLPTKNLGEV-KFFLGCEYIRDREAGTKEISQ--ESYIRSVLDKFNVCSTSSTPASPANDNNRSLKEDEGAKDVPFREVVGSLMWIANRTRCDINIATRAVARQSHNPKKRDWKASQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLV--------ASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKALPRDLFE 484          
BLAST of mRNA_D-mesarthrocarpus_Contig1055.1.2 vs. uniprot
Match: A0A6H5KJP2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJP2_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 1.630e-25
Identity = 111/386 (28.76%), Postives = 162/386 (41.97%), Query Frame = 1
Query:    1 AFVQPEIAVELYMRLPPGCGDWSDKTGPLYRARYGLEQASTTWGMHLTNELTALGFEQCLSDTWVFRCFLGRRLS*HWLITLMTCLWSAMLVSAMPXXXSRTTCSLRRT*AS*SGTQGVRSHGIDTQEGSR*PNSVHRTNM*ALFCHHYEPYPCCPIT*ALAATGPRGGV*GEV*STDR-CATLGGQH--APAGHC*FSTRSDQAYAGTFQDTLEG*SEGA*VSSDDT*LGCPLPENRTDEALCLLTPRMVEMRMTTVLFWGCRMFAGSAVAWFSRTQQAVALAGTEAECMAMGESTVSRKYLEIRSA----LSGVEDNTMWVCEDNMEAINMAENPSSSARSKHVDVRHHFLRQLVQDRVIEILPTPTNSQHADILTKPLGESLF 1137
            AFVQ E+  +++MRLP GCG  S     LY++ YGL+QAS  W  HLT  L  LGF QCL+D  VFR      +    ++ +   +W A                          T  V     D  E     +   R  + +L                  AT  R  +   V +  R CA+    H  A  G   +  R+        +  + G S    V +D+                     +  + R  +    G  M  G  V WFSRTQ+ V L+ TE E +A+ +  V ++ L +R      L   + + + V EDN  AI +A NP +++ SKH+DVRHHF+R+LV+ + I I    +  QHAD LTK + +  F
Sbjct:   43 AFVQSELEDDVFMRLPQGCGRLSGLIVKLYKSLYGLKQASRQWHAHLTKCLLLLGFVQCLADACVFRLMEDGCVIMIIVVHVGFLMWLA--------------------------TXPVSVKLTDFDENEACADVPFRELVGSLM---------------WLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADNA-------------------SKAADRRSVS---GGVVMCGGGGVTWFSRTQKCVTLSTTEVEYVAIAD--VLKEVLFLRQVWRLMLLDADMSCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAISKESF 363          
BLAST of mRNA_D-mesarthrocarpus_Contig1055.1.2 vs. uniprot
Match: A0A6H5JH25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH25_9PHAE)

HSP 1 Score: 119 bits (298), Expect = 1.810e-25
Identity = 121/391 (30.95%), Postives = 174/391 (44.50%), Query Frame = 1
Query:   28 ELYMRLPPGCGDWSDKTGP-LYRARYGLEQASTTWGMHLTNELTALGFEQCLSDTWVFRCFLGRRLS*HWLITLMTCLWSA------MLVSAMPXXXSRTTCSLRRT*AS*SGTQGVRSHGIDTQEGSR*PNSVHRTNM*ALFCHHYEPYPCCPIT*AL-------AATGPRGGV*G---EV*STDRCATLGGQHAPAGHC*FSTRSDQAYAGTFQDTLEG*SEGA*VSSDDT*LGC-PLPENRTDEALCLLTPRMVEMRMTTVLFWGCRMFAGSAVAWFSRTQQAVALAGTEAECMAMGESTVSRKYLE--IRSALSGVEDNTMWVCEDNMEAINMAENPSSSARSKHVDVRHHFLRQLVQDRVIEILPTPTNSQHADILTKPLGESLFK 1140
            E++M+LPPGC   S K    L ++ YGL+QAS T+   L ++L  +GFEQ LSD  V R  +G  +     I +   L++       ++V A+    S  T +L +      G    R     T E S+   S  R+ +           P  P   +        A   P   V G    + +  R  T       A H     +SD   A      L+  +        DT +    L     D A      R V   +  V        AG  V+WFS TQ+ V+L+ +EAE +AMG+      ++   ++      +   + V EDN  AI +AENP SS+RSKH+DVRHHFLR L ++ VIE+   P+  QHADILTK L  +LF+
Sbjct:  892 EVFMKLPPGCDSMSGKKNVRLNKSLYGLKQASRTFYKRLVSDLLRIGFEQSLSDPCVLRFMMGDEVMGIIAIHVDDILYAGTKRLAEVIVEAL--GDSLPTKNLGKV-IFFLGCAFSRDREAGTIEISQ--ESYIRSVLERFNISRTSSIPASPANDSRSVMEDEEAGDVPFREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQRILSNLKETAHLTLKYKQDTTVDVGTLVYVDADFASKATDRRSVSGALVLV--------AGCLVSWFSWTQKCVSLSTSEAEYIAMGDGVKEALFVNGMLQFLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRNLFE 1269          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1055.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KKK1_9PHAE2.220e-2829.85Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JRL9_9PHAE2.460e-2829.85Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JV80_9PHAE1.450e-2730.15Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KZH7_9PHAE1.530e-2729.58Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRE7_9PHAE7.390e-2730.15Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JCD8_9PHAE3.810e-2629.81Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5L3I1_9PHAE3.900e-2629.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9B2_9PHAE1.120e-2530.25Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KJP2_9PHAE1.630e-2528.76Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JH25_9PHAE1.810e-2530.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1055contigD-mesarthrocarpus_Contig1055:472..1643 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog90675.XP_010506885.1
PFAMsPhyH
Model size1161
Max annot lvl35493|Streptophyta
KEGG koko:K00477
KEGG Pathwayko04146,map04146
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016705,GO:0016706,GO:0044464,GO:0048244,GO:0051213,GO:0055114,GO:0071944
Exons2
Evalue5.58e-19
EggNOG OGsCOG2801@1|root,COG5285@1|root,KOG0017@2759|Eukaryota,KOG3290@2759|Eukaryota,37PY8@33090|Viridiplantae,3GG3P@35493|Streptophyta,3HYAG@3699|Brassicales
EC1.14.11.18
DescriptionPhytanoyl-CoA dioxygenase (PhyH)
Cds size423
COG categoryI
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789191.6886063-CDS-D-mesarthrocarpus_Contig1055:471..7551680789191.6886063-CDS-D-mesarthrocarpus_Contig1055:471..755Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1055 472..755 -
1680789191.7111332-CDS-D-mesarthrocarpus_Contig1055:766..9051680789191.7111332-CDS-D-mesarthrocarpus_Contig1055:766..905Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1055 767..905 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789191.7230654-UTR-D-mesarthrocarpus_Contig1055:905..16431680789191.7230654-UTR-D-mesarthrocarpus_Contig1055:905..1643Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig1055 906..1643 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1055.1.2prot_D-mesarthrocarpus_Contig1055.1.2Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig1055 472..905 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig1055.1.2

>prot_D-mesarthrocarpus_Contig1055.1.2 ID=prot_D-mesarthrocarpus_Contig1055.1.2|Name=mRNA_D-mesarthrocarpus_Contig1055.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=141bp
MVEMRMTTVLFWGCRMFAGSAVAWFSRTQQAVALAGTEAECMAMGESTVS
RKYLEIRSALSGVEDNTMWVCEDNMEAINMAENPSSSARSKHVDVRHHFL
RQLVQDRVIEILPTPTNSQHADILTKPLGESLFKFMLVHC*
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mRNA from alignment at D-mesarthrocarpus_Contig1055:472..1643-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig1055.1.2 ID=mRNA_D-mesarthrocarpus_Contig1055.1.2|Name=mRNA_D-mesarthrocarpus_Contig1055.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1172bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1055:472..1643- (Discosporangium mesarthrocarpum MT17_79)
GCTTTTGTGCAGCCTGAGATTGCTGTTGAGTTGTACATGAGGCTTCCCCC TGGCTGTGGTGACTGGTCTGATAAGACTGGACCTTTGTACCGAGCTCGAT ATGGGTTGGAGCAAGCAAGTACGACCTGGGGCATGCATCTAACCAACGAG CTGACCGCTTTAGGCTTTGAACAGTGTCTCTCAGATACTTGGGTGTTTCG ATGTTTTCTAGGAAGGAGATTGTCTTGACACTGGCTCATCACATTGATGA CATGTTTGTGGTCGGCTATGCTTGTGAGTGCAATGCCTTGTGTGTGGAGC CGAACAACATGTTCCCTACGAAGAACCTAGGCGAGTTGAAGTGGTACACA GGGTGTGCGTTCACACGGGATAGACACACAGGAAGGATCAAGGTGACCAA ACAGCGTACATCGAACAAATATGTGAGCGCTTTTCTGTCATCACTACGAG CCCTATCCCTGCTGCCCCATCACTTAAGCTCTTGCTGCTACAGGACCACG AGGAGGAGTGTGAGGAGAAGTTTAAAGCACTGATAGGTGTGCTACTCTGG GTGGCCAACATGCCCCGGCCGGGCATTGCTAATTCAGTACGCGCTCTGAC CAGGCATATGCAGGCACCTTCCAAGACACACTGGAAGGCTAGTCTGAGGG TGCTTAAGTTTCTTCGGATGACACGTGATTGGGGTGTCCCCTTCCAGAAA ACAGGACAGATGAGGCTCTATGCCTGCTGACACCTCGTATGGTGGAGATG AGGATGACTACCGTTCTGTTCTGGGGGTGCAGGATGTTTGCTGGTTCAGC AGTAGCCTGGTTTTCTAGGACTCAACAAGCTGTTGCTCTTGCTGGTACTG AAGCAGAATGCATGGCAATGGGAGAGTGTGTGAAGTAGCTACTGTTTCTC GAAAATATCTTGAGATTCGTTCAGCCTTGAGTGGAGTTGAGGACAACACA ATGTGGGTGTGTGAGGACAACATGGAGGCTATCAATATGGCAGAGAACCC CTCAAGTTCTGCCAGAAGCAAGCACGTTGATGTGCGGCATCATTTTCTTA GGCAGTTAGTGCAAGACAGGGTGATTGAGATTTTACCCACTCCCACCAAT TCACAGCATGCAGATATCCTGACAAAGCCTTTGGGAGAGAGTTTGTTCAA ATTCATGCTAGTGCACTGCTAA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1055:472..1643-

>mRNA_D-mesarthrocarpus_Contig1055.1.2 ID=mRNA_D-mesarthrocarpus_Contig1055.1.2|Name=mRNA_D-mesarthrocarpus_Contig1055.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=423bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1055:472..1643- (Discosporangium mesarthrocarpum MT17_79)
ATGGTGGAGATGAGGATGACTACCGTTCTGTTCTGGGGGTGCAGGATGTT
TGCTGGTTCAGCAGTAGCCTGGTTTTCTAGGACTCAACAAGCTGTTGCTC
TTGCTGGTACTGAAGCAGAATGCATGGCAATGGGAGAGTCTACTGTTTCT
CGAAAATATCTTGAGATTCGTTCAGCCTTGAGTGGAGTTGAGGACAACAC
AATGTGGGTGTGTGAGGACAACATGGAGGCTATCAATATGGCAGAGAACC
CCTCAAGTTCTGCCAGAAGCAAGCACGTTGATGTGCGGCATCATTTTCTT
AGGCAGTTAGTGCAAGACAGGGTGATTGAGATTTTACCCACTCCCACCAA
TTCACAGCATGCAGATATCCTGACAAAGCCTTTGGGAGAGAGTTTGTTCA
AATTCATGCTAGTGCACTGCTAA
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