mRNA_D-mesarthrocarpus_Contig10527.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10527.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10527.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10527.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10527contigD-mesarthrocarpus_Contig10527:561..2482 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Model size472
Hectar predicted targeting categoryother localisation
Exons2
Cds size471
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789189.6869779-CDS-D-mesarthrocarpus_Contig10527:560..8901680789189.6869779-CDS-D-mesarthrocarpus_Contig10527:560..890Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10527 561..890 +
1680789189.7079542-CDS-D-mesarthrocarpus_Contig10527:2340..24811680789189.7079542-CDS-D-mesarthrocarpus_Contig10527:2340..2481Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10527 2341..2481 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10527.1.1prot_D-mesarthrocarpus_Contig10527.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10527 561..2481 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10527.1.1

>prot_D-mesarthrocarpus_Contig10527.1.1 ID=prot_D-mesarthrocarpus_Contig10527.1.1|Name=mRNA_D-mesarthrocarpus_Contig10527.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=157bp
FKGYTPLEPGPYPDDKARAKAMKARAKEIREAKAREAMEGSRRSSRASKG
YMGPWGGDSDEEEQFPLLHGGGGMVSPRKRKRGEVETRAEVAAGDRVVLG
IRVSKRQLAQANTSPGASRTDDLSRRDKKRQLIIRGPKPEALPAAAKRKA
GAAVGVG
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mRNA from alignment at D-mesarthrocarpus_Contig10527:561..2482+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10527.1.1 ID=mRNA_D-mesarthrocarpus_Contig10527.1.1|Name=mRNA_D-mesarthrocarpus_Contig10527.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1922bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10527:561..2482+ (Discosporangium mesarthrocarpum MT17_79)
TTCAAGGGATACACCCCCCTGGAGCCTGGGCCTTACCCGGATGACAAGGC
TCGTGCCAAGGCCATGAAGGCCCGCGCCAAGGAGATCAGAGAGGCCAAGG
CCCGGGAGGCCATGGAGGGCAGCCGCAGGAGCAGCAGGGCTTCGAAGGGG
TACATGGGGCCCTGGGGCGGCGACAGTGACGAGGAGGAGCAATTCCCTCT
GCTCCATGGCGGTGGGGGCATGGTGTCGCCGAGGAAGAGGAAGAGAGGGG
AGGTGGAGACCAGGGCGGAGGTGGCTGCCGGGGATAGGGTGGTCTTGGGG
ATCAGGGTGTCCAAGAGGCAGCTGGCCCAGGTGAGGATGAGGGGCAGTGG
TAGGGGTGCGGGGATTGAGCCCTGCTCCATCAGGGGGCCTGAGCGGAAGA
GGAGTGATTAACCACCCTAGTCCTTGATCCTTTACAGTCTTTTAACAATA
CAGCGTAGTGCAGTGCTGTAGACTCATAACCCTCTTTTTCAAAAAAAAAT
TTCAACTCTTTTTCAATCACCGCTACCTGCAGTAGGTTTAAAACCCTGCA
CTGCGGCAGGTTCTTGGCGGTTGAGAAGTCGGGTTTGTCCTCTCTGGCTC
CATTGTGACTAGTCTCTGTGCTAGTAAAGGCTATGGGGATGCAATGTGTG
TGTGTGTGTGTGTGTGTGTGTCTTTTTTTTACTTGCCAGAAGTATGTCTC
GTGCTTTGGAGGAAGGACTGGGTAGCCCTCTTGTCTCACTGATCAGCAAG
GTAGGGTTGGATTGGGCGAACTATCTGTCCCGGTGATTCGAAATCAAACA
GGCACCTGTCGCTCAACTCCATGACCATAGGGAACCAACTCCACTCAAGT
GTTCTTTCTCTCACTCATTTGTTGCTGCTCCAGGCTTGAATGGAACAATT
GCAGGCCTTTTTACGTAACCCATCCTCGAGTTAGGCTTTTTAGGTGTATT
GGGGATTGGAAAAAGGGCCCAGAAACCAGTTCTGGGTCTTCCACACCAAC
AACAGTAGGGGAAAATCCTACTCTTCACTCTGCTGTGCCTGTATGTGTGT
GTGTGTCGCTGAAAGTTATGTCCATGCCCTGCCCTGCCCTGCCCCGCCCC
TCCTCGAGGTGACCCATCTCACCAGTGAATCCTGATACCCAGTACTTTAA
AAGCATGGAAGTACATAACATTTGCCCTATCCCTCAAACGCTCATTCCAG
CCAAGAGCAGCCTGTGGCTAAAAATGGTGAACTTGGAAGGACTTTGCACA
TTTTTTTTTTGTCTCAACTGCTCGCTTCTTTTTCGCTTCTTTTTGGCTCT
TGCAGTTACATACTGAAAGTTAATGAAGACAGCGCAGAGCCATCGGTATT
GCTTCTTCTGGCAGAAGCAGAGCCATGGAGCTCTCTCTCCGCTTTTCTTT
GGCGCTTTTTCCTTTTTTTTTTTTTCAGGCGAAGAGCACCCCTGAAGAAC
CAAAAAAAATCATGTACCTGTGTTCAGGGGGGTCAATAATGAGGAGAGGC
ACCCTGAGAACAGGGACAAGATACTAGTGCGGTGGTGGTACAGATAAAAG
GGAAAACAAACGAAGGACATGGCTTCATGGTGAAACCCTTGTTGCAGAAC
AACCCTTGCAGGCAACCCGGCTGACCACCGTGAATGCAAACCCCTGTAAG
AAAAGGGAAAGGGTATCGAGTCTTACACCTGCTAATAATAGTGTAATTCC
ATCCCCAAACCAGAGGGGGAAAGTGCTGAACAAAGGCTGCTGATCCAATT
TATACTGTACCCCCCCCTCCCCCACCTCAGGCAAACACCTCCCCTGGAGC
ATCTCGAACAGATGACCTCTCCAGGAGAGACAAGAAGCGCCAGCTAATCA
TCCGTGGCCCCAAGCCAGAGGCCCTGCCTGCGGCTGCCAAGCGCAAGGCT
GGGGCGGCGGTGGGGGTGGGGG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10527:561..2482+

>mRNA_D-mesarthrocarpus_Contig10527.1.1 ID=mRNA_D-mesarthrocarpus_Contig10527.1.1|Name=mRNA_D-mesarthrocarpus_Contig10527.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=471bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10527:561..2482+ (Discosporangium mesarthrocarpum MT17_79)
TTCAAGGGATACACCCCCCTGGAGCCTGGGCCTTACCCGGATGACAAGGC
TCGTGCCAAGGCCATGAAGGCCCGCGCCAAGGAGATCAGAGAGGCCAAGG
CCCGGGAGGCCATGGAGGGCAGCCGCAGGAGCAGCAGGGCTTCGAAGGGG
TACATGGGGCCCTGGGGCGGCGACAGTGACGAGGAGGAGCAATTCCCTCT
GCTCCATGGCGGTGGGGGCATGGTGTCGCCGAGGAAGAGGAAGAGAGGGG
AGGTGGAGACCAGGGCGGAGGTGGCTGCCGGGGATAGGGTGGTCTTGGGG
ATCAGGGTGTCCAAGAGGCAGCTGGCCCAGGCAAACACCTCCCCTGGAGC
ATCTCGAACAGATGACCTCTCCAGGAGAGACAAGAAGCGCCAGCTAATCA
TCCGTGGCCCCAAGCCAGAGGCCCTGCCTGCGGCTGCCAAGCGCAAGGCT
GGGGCGGCGGTGGGGGTGGGG
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