mRNA_D-mesarthrocarpus_Contig10526.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10526.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig10526.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10526.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10526contigD-mesarthrocarpus_Contig10526:3112..4213 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Model size409
Hectar predicted targeting categoryother localisation
Exons2
Cds size408
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789189.6391585-CDS-D-mesarthrocarpus_Contig10526:3112..33731680789189.6391585-CDS-D-mesarthrocarpus_Contig10526:3112..3373Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10526 3113..3373 -
1680789189.6498249-CDS-D-mesarthrocarpus_Contig10526:4066..42131680789189.6498249-CDS-D-mesarthrocarpus_Contig10526:4066..4213Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10526 4067..4213 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10526.2.1prot_D-mesarthrocarpus_Contig10526.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10526 3113..4213 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10526.2.1

>prot_D-mesarthrocarpus_Contig10526.2.1 ID=prot_D-mesarthrocarpus_Contig10526.2.1|Name=mRNA_D-mesarthrocarpus_Contig10526.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=136bp
RILRVRARFAQNKALLAGKEEATGEGKGGSRPRAGGDTKDIYPKDCLLQV
SAHAGEGMFRDMKHFCLPPPSPAAASTSASTTAGEPSGGGHGGRGRGGVA
AEGEEEGGERAQGTAAEGGVMKHPSPRGGPGSESVG
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mRNA from alignment at D-mesarthrocarpus_Contig10526:3112..4213-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10526.2.1 ID=mRNA_D-mesarthrocarpus_Contig10526.2.1|Name=mRNA_D-mesarthrocarpus_Contig10526.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1102bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10526:3112..4213- (Discosporangium mesarthrocarpum MT17_79)
AGGATCCTTAGAGTTCGAGCCAGATTCGCCCAAAACAAGGCATTGTTGGC
AGGGAAGGAAGAAGCTACTGGGGAAGGAAAGGGTGGGAGTAGGCCGAGGG
CTGGGGGAGACACGAAGGATATTTACCCCAAGGATTGCCTCCTCCAGGTG
AGGCCCCCGGCAAGCAGGGATGTGTGTGGAGATGATTCATGCGGATATGC
CACGACAAGACCGATGTATTGCCGCTGGTATGGGTACAATTTTGGAACTG
ATGCACACCCGGGAGCTGAGTTAAGGTTGAGGTTGTGGATTTAGGCTGTG
GCTTTTCAGTCAAAATTCTGTTGCATGGTCCCTCCTCTCTTTCTTTTCTT
TGCACCCTCCCTCGTCTGTGGCCATGTTGGGCATGGTGCCTACTATTAAT
ATACTTTGAAGTGTACTCCAAACCATCAGGGGACTTGTGTGGCACTTTTC
GCTTCCAAAGGGCATGTGTGCTCTGGAGTGCTATGGAGGGAGTGCTATAC
CCCCTGGGGCAAACAAAATCTGGTAGAACTTTGCGGCACAGTGGTGCTGC
TTGTGCTATGACCTTTGAACATGTTCACAGTCCTCACTGCCGCCGCTGAA
TACAGCTTTTGCCTTTGGAACCATGAGCACCCCCTTTTAACTCCTGCCCG
GTCTGAGATGAAGAAGGCAGGGGCACCTGCTTTTGTGTCTGTCTGTCTGC
CCTTGCCTCCTCTCTACGTGCGCCCAACCCCTCTGCTCCCACACATGCCT
AAATTAACTCCTGCCCAGCCTATAACTGTGCCCCCTGCCCCTTTTTCCTT
GGCTCCCCACTTGGTCTCCTTGTGCGGACCCCGAGAGTAGGTGTCAGCCC
ACGCCGGTGAAGGTATGTTCCGCGACATGAAACACTTCTGCCTCCCCCCA
CCCTCGCCCGCGGCCGCCTCTACATCCGCCAGCACCACCGCTGGTGAGCC
CAGTGGGGGTGGGCATGGCGGCAGAGGTAGGGGGGGGGTGGCCGCCGAGG
GGGAAGAAGAGGGTGGTGAGCGAGCACAGGGAACAGCGGCCGAAGGAGGC
GTTATGAAACACCCCAGCCCCAGGGGGGGGCCAGGAAGCGAGTCTGTGGG
AG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10526:3112..4213-

>mRNA_D-mesarthrocarpus_Contig10526.2.1 ID=mRNA_D-mesarthrocarpus_Contig10526.2.1|Name=mRNA_D-mesarthrocarpus_Contig10526.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=408bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10526:3112..4213- (Discosporangium mesarthrocarpum MT17_79)
AGGATCCTTAGAGTTCGAGCCAGATTCGCCCAAAACAAGGCATTGTTGGC
AGGGAAGGAAGAAGCTACTGGGGAAGGAAAGGGTGGGAGTAGGCCGAGGG
CTGGGGGAGACACGAAGGATATTTACCCCAAGGATTGCCTCCTCCAGGTG
TCAGCCCACGCCGGTGAAGGTATGTTCCGCGACATGAAACACTTCTGCCT
CCCCCCACCCTCGCCCGCGGCCGCCTCTACATCCGCCAGCACCACCGCTG
GTGAGCCCAGTGGGGGTGGGCATGGCGGCAGAGGTAGGGGGGGGGTGGCC
GCCGAGGGGGAAGAAGAGGGTGGTGAGCGAGCACAGGGAACAGCGGCCGA
AGGAGGCGTTATGAAACACCCCAGCCCCAGGGGGGGGCCAGGAAGCGAGT
CTGTGGGA
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