mRNA_D-mesarthrocarpus_Contig10522.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10522.1.1 vs. uniprot
Match: D8LNV5_ECTSI (ATP-binding cassette superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNV5_ECTSI) HSP 1 Score: 243 bits (619), Expect = 2.930e-70 Identity = 142/228 (62.28%), Postives = 169/228 (74.12%), Query Frame = 1
Query: 1 TGPSTFTGILGPSGAGKSSLLDILAGRRKGAGCGWGASGHVVTGELRVNGEVAEG--EGVRKISGYVTQEDILPPTLTCKEHLMFHALLRMGR-AKKKEREGRVLELLEELGLSGVQRSLIGGGLRRGISGGEKRRLSIATELLNRPALIFLDEPTTGLDASTALRVAHILARLALGGTTVVASLHQPRREVLFLIDQVMLLSRGQVAYFGSPWDAEKHFASIGNPFP 675
T ST TGILGPSGAGKSSLLDILAGR++ +G G ASGHV + ++G G E +R+++GYV QED+LP TLTC EHLMFHA LRM R A ER R L +L ELGLS V S +G +RG+SGGEKRRLSIA EL+ P L+FLDEPTTGLDA+TALRV +L +A GTTV+ SLHQPR VL L+D VMLLSRG+VAYFGSP +E +F+S+G PFP
Sbjct: 591 TTTSTLTGILGPSGAGKSSLLDILAGRKR-SGEGR-ASGHV---SVSLDGRGGRGGPEDIRRVAGYVPQEDVLPGTLTCYEHLMFHARLRMPRKASHAERRERALAVLAELGLSRVADSRVGDARKRGLSGGEKRRLSIAAELMAGPPLLFLDEPTTGLDAATALRVMVLLRGVASRGTTVLCSLHQPRPRVLNLLDNVMLLSRGKVAYFGSPQGSESYFSSVGRPFP 813
BLAST of mRNA_D-mesarthrocarpus_Contig10522.1.1 vs. uniprot
Match: A0A6H5KKD9_9PHAE (ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKD9_9PHAE) HSP 1 Score: 241 bits (616), Expect = 7.440e-70 Identity = 137/225 (60.89%), Postives = 167/225 (74.22%), Query Frame = 1
Query: 13 TFTGILGPSGAGKSSLLDILAGR----RKGAGCGWGASGHVVTGELRVNGEVAEGEGVRKISGYVTQEDILPPTLTCKEHLMFHALLRM-GRAKKKEREGRVLELLEELGLSGVQRSLIGGGLRRGISGGEKRRLSIATELLNRPALIFLDEPTTGLDASTALRVAHILARLALGGTTVVASLHQPRREVLFLIDQVMLLSRGQVAYFGSPWDAEKHFASIGNPF 672
T T I+GPSGAGK+SLL+ LAGR ++ A G +TG +R+NG A VR +S YVTQED+LP TLTC EHLMFHA LR+ G R RV E+LE+LGL+G++ S IGGGL RGISGGEKRRLSI TELL RPAL+FLDEPTTGLD+STA+RV +++ +A GTTVV S+HQPR EV+ LI +V+LLSRG VA+ G+P DAE HFA+IG PF
Sbjct: 1463 TVTAIMGPSGAGKTSLLNALAGRLQDVQREASGGGRRRRPGLTGAVRLNGLAAGPAEVRALSAYVTQEDVLPETLTCYEHLMFHAQLRLPGHTTLARRHDRVAEVLEQLGLAGIRDSRIGGGLSRGISGGEKRRLSIGTELLTRPALLFLDEPTTGLDSSTAVRVMKLVSEIASLGTTVVCSVHQPRPEVVRLIHKVILLSRGAVAFCGAPSDAEAHFAAIGRPF 1687
BLAST of mRNA_D-mesarthrocarpus_Contig10522.1.1 vs. uniprot
Match: A0A6H5KT00_9PHAE (ABC protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT00_9PHAE) HSP 1 Score: 239 bits (610), Expect = 4.620e-69 Identity = 139/234 (59.40%), Postives = 166/234 (70.94%), Query Frame = 1
Query: 7 PSTFTGILGPSGAGKSSLLDILAGRRKGAGCGWGASGHVVTGELRVNGEV---AEGEG-------VRKISGYVTQEDILPPTLTCKEHLMFHALLRMGR-AKKKEREGRVLELLEELGLSGVQRSLIGGGLRRGISGGEKRRLSIATELLNRPALIFLDEPTTGLDASTALRVAHILARLALGGTTVVASLHQPRREVLFLIDQVMLLSRGQVAYFGSPWDAEKHFASIGNPFP 675
PST TGILGPSGAGKSSLLDILAGR++ +GE R +G+V +G G +R+++GYV QED+LP TLTC EHLMFHA LRM R A ER R L +L ELGLS V S +G +RG+SGGEKRRLSIA EL+ P L+FLDEPTTGLDA+TALRV +L +A GTTV+ SLHQPR VL L+D VMLLSRG+VAYFGSP +E +F+S+G PFP
Sbjct: 495 PSTLTGILGPSGAGKSSLLDILAGRKR-------------SGEGRASGQVFVSLDGRGGRGGPAEIRRVAGYVPQEDVLPGTLTCYEHLMFHARLRMPRKATHGERRERALAVLGELGLSRVADSRVGDARKRGLSGGEKRRLSIAAELMAGPPLLFLDEPTTGLDAATALRVMVLLKGVASRGTTVLCSLHQPRPRVLNLLDNVMLLSRGKVAYFGSPQGSESYFSSVGRPFP 715
BLAST of mRNA_D-mesarthrocarpus_Contig10522.1.1 vs. uniprot
Match: A0A835Z9G6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9G6_9STRA) HSP 1 Score: 203 bits (517), Expect = 4.740e-59 Identity = 118/217 (54.38%), Postives = 147/217 (67.74%), Query Frame = 1
Query: 19 TGILGPSGAGKSSLLDILAGRRKGAGCGWGASGHVVTGELRVNGEVAEG-EGVRKISGYVTQEDILPPTLTCKEHLMFHALLRMGRAKKK-----EREGRVLELLEELGLSGVQRSLIGGGLRRGISGGEKRRLSIATELLNRPALIFLDEPTTGLDASTALRVAHILARLALGGTTVVASLHQPRREVLFLIDQVMLLSRGQVAYFGSPWDAEKHF 651
TG+LGPSGAGK++LL++LAGRR G GA +G L ++G A E VR +SGYV Q+D+LP TLT EHL FHA LR+ R + +R RVLE+++ LGL V SLIG RRGISGGE+RR+SIA ELL RP L+FLDEPT+GLDA +AL V ++A A GT VVASLHQPRREV + + +LL G+VAYFG P +F
Sbjct: 2 TGLLGPSGAGKTTLLELLAGRRAAGGAERGAW----SGALELDGAAAASPEDVRAVSGYVAQDDVLPGTLTVYEHLAFHAALRLPRGHGRGGGATQRTARVLEVIDNLGLGAVADSLIGDAFRRGISGGERRRVSIAAELLTRPPLLFLDEPTSGLDAGSALAVMRLVAAAARRGTAVVASLHQPRREVFDALGRALLLCAGEVAYFGPPRGVRDYF 214
BLAST of mRNA_D-mesarthrocarpus_Contig10522.1.1 vs. uniprot
Match: A0A7R9U018_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9U018_9VIRI) HSP 1 Score: 197 bits (500), Expect = 2.760e-54 Identity = 114/215 (53.02%), Postives = 144/215 (66.98%), Query Frame = 1
Query: 25 ILGPSGAGKSSLLDILAGRRKGAGCGWGASGHVVTGELRVNGEVAEGEGVRKISGYVTQEDILPPTLTCKEHLMFHALLRMGRAKKKE-REGRVLELLEELGLSGVQRSLIGGGLRRGISGGEKRRLSIATELLNRPALIFLDEPTTGLDASTALRVAHILARLALGGTTVVASLHQPRREVLFLIDQVMLLSR-GQVAYFGSPWDAEKHFASIG 663
ILGPSGAGKS+LLD+L+GR WG V G +RVNG++A E +R ISGYV QED LP T T E+L+FHA LR+ R +E RE RV EL+ LGL V IG RRG+SGGE+RR+SIA ELL +P L+FLDEPT+GLD+S + RV IL+ L GG T V S+HQPR + L D+V++LS G++ Y GS D HF ++G
Sbjct: 469 ILGPSGAGKSTLLDVLSGRL------WG---RCVRGTVRVNGQIASAEALRSISGYVPQEDALPSTSTVLEYLLFHAALRLPRQMGREQRERRVCELVTRLGLQKVAGGTIGSASRRGLSGGERRRVSIAAELLTQPGLLFLDEPTSGLDSSNSTRVLGILSALGEGGVTSVMSIHQPRADAFQLFDRVLILSGDGRMVYSGSARDVRAHFEAVG 674
BLAST of mRNA_D-mesarthrocarpus_Contig10522.1.1 vs. uniprot
Match: C1E9X4_MICCC (ATP-binding cassette superfamily (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E9X4_MICCC) HSP 1 Score: 179 bits (455), Expect = 2.670e-53 Identity = 101/202 (50.00%), Postives = 136/202 (67.33%), Query Frame = 1
Query: 25 ILGPSGAGKSSLLDILAGRRKGAGCGWGASGHVVTGELRVNGEVAEGEGVRKISGYVTQEDILPPTLTCKEHLMFHALLRM-GRAKKKEREGRVLELLEELGLSGVQRSLIGGGLRRGISGGEKRRLSIATELLNRPALIFLDEPTTGLDASTALRVAHILARLALGGTTVVASLHQPRREVLFLIDQVMLLSR-GQVAYFG 624
ILGPSGAGK++L+DILAGR + GH V GELRVNG +R +SGYVTQ+D+LP T T EHL FH LR+ G ++ + + + +++LG+S + S IG RG+SGGEKRR+SIATELL P ++FLDEPTTGLD++ A +V IL+ L G TVV S+HQPR ++ L+D+V+++S G V Y G
Sbjct: 19 ILGPSGAGKTTLIDILAGRP--------SVGHEVAGELRVNGRAMTSAEMRAVSGYVTQDDVLPGTSTVWEHLTFHGALRLPGNVERARLKAVIWQTMQDLGISKIAHSFIGDEFTRGLSGGEKRRVSIATELLTSPGIMFLDEPTTGLDSTNAAKVVDILSGLGSIGVTVVLSIHQPRPDIFRLLDRVLVMSSTGGVIYSG 212
BLAST of mRNA_D-mesarthrocarpus_Contig10522.1.1 vs. uniprot
Match: A0A7R9Y6A1_MICPS (Hypothetical protein (Fragment) n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9Y6A1_MICPS) HSP 1 Score: 191 bits (485), Expect = 5.170e-53 Identity = 105/216 (48.61%), Postives = 146/216 (67.59%), Query Frame = 1
Query: 25 ILGPSGAGKSSLLDILAGRRKGAGCGWGASGHVVTGELRVNGEVAEGEGVRKISGYVTQEDILPPTLTCKEHLMFHALLRM-GRAKKKEREGRVLELLEELGLSGVQRSLIGGGLRRGISGGEKRRLSIATELLNRPALIFLDEPTTGLDASTALRVAHILARLALGGTTVVASLHQPRREVLFLIDQVMLLSR-GQVAYFGSPWDAEKHFASIGN 666
ILGPSGAGK++LLD+LAGR + GHV+TG++ ++GE +R +SGYV Q+D+LP T T EHLMFHA LR+ G +K V + + +LG++ + + IG RG+SGGEKRR+S+ATELL P ++FLDEPTTGLDA+ A +V ILA L G T++ S+HQPR ++ L+D+V+++S G+V Y G DAE HF S+ N
Sbjct: 34 ILGPSGAGKTTLLDVLAGRP--------SPGHVITGDVALDGERMSNSELRHVSGYVPQDDVLPGTSTVWEHLMFHAALRLPGSVDRKRLRSVVWQTMRDLGITKLAHAHIGDAFTRGLSGGEKRRVSVATELLTSPGVMFLDEPTTGLDATNAAKVVDILAGLGALGVTILLSIHQPRPDIFRLLDRVLVMSSDGRVVYSGPSLDAEAHFESMRN 241
BLAST of mRNA_D-mesarthrocarpus_Contig10522.1.1 vs. uniprot
Match: C1MIB0_MICPC (ATP-binding cassette superfamily n=3 Tax=Micromonas pusilla TaxID=38833 RepID=C1MIB0_MICPC) HSP 1 Score: 191 bits (485), Expect = 2.880e-52 Identity = 105/216 (48.61%), Postives = 146/216 (67.59%), Query Frame = 1
Query: 25 ILGPSGAGKSSLLDILAGRRKGAGCGWGASGHVVTGELRVNGEVAEGEGVRKISGYVTQEDILPPTLTCKEHLMFHALLRM-GRAKKKEREGRVLELLEELGLSGVQRSLIGGGLRRGISGGEKRRLSIATELLNRPALIFLDEPTTGLDASTALRVAHILARLALGGTTVVASLHQPRREVLFLIDQVMLLSR-GQVAYFGSPWDAEKHFASIGN 666
ILGPSGAGK++LLD+LAGR + GHV+TG++ ++GE +R +SGYV Q+D+LP T T EHLMFHA LR+ G +K V + + +LG++ + + IG RG+SGGEKRR+S+ATELL P ++FLDEPTTGLDA+ A +V ILA L G T++ S+HQPR ++ L+D+V+++S G+V Y G DAE HF S+ N
Sbjct: 1386 ILGPSGAGKTTLLDVLAGRP--------SPGHVITGDVALDGERMSNSELRHVSGYVPQDDVLPGTSTVWEHLMFHAALRLPGSVDRKRLRSVVWQTMRDLGITKLAHAHIGDAFTRGLSGGEKRRVSVATELLTSPGVMFLDEPTTGLDATNAAKVVDILAGLGALGVTILLSIHQPRPDIFRLLDRVLVMSSDGRVVYSGPSLDAEAHFESMRN 1593
BLAST of mRNA_D-mesarthrocarpus_Contig10522.1.1 vs. uniprot
Match: A0A8J4AKR2_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4AKR2_9CHLO) HSP 1 Score: 190 bits (483), Expect = 5.390e-52 Identity = 114/233 (48.93%), Postives = 149/233 (63.95%), Query Frame = 1
Query: 1 TGPSTFTGILGPSGAGKSSLLDILAGRRKGAGCGWGASGHVVTGELRVNGEVAEGEGVRKISGYVTQEDILPPTLTCKEHLMFHALLRM-------GRAKKKEREGRVLELLEELGLSGVQRSLIGGGLRRGISGGEKRRLSIATELLNRPALIFLDEPTTGLDASTALRVAHILARLALGGTTVVASLHQPRREVLFLIDQVMLLSR-GQVAYFGSPWDAEKHFASIGNPFP 675
TG I+GPSGAGK++L+D+LAGRR G G V+GE+R+NG +RK+ GYV QE +LP T T E+L+FHA LR+ G A+ RV ++ ELGL+ V R+LIG RG+SGGEKRR+SIA ELL RP L+ LDEPTTGLD++ A RV +LA LA GG V+ S+HQPR +VL +D+++LLS GQV Y G +HFA++G P
Sbjct: 1627 TGRCCLFAIVGPSGAGKTTLMDVLAGRRHGTHGG-------VSGEIRINGHRVGAAQLRKVCGYVAQEIVLPGTSTVTEYLIFHAALRLPAALAATGTARGSPIAVRVAAVISELGLTRVARNLIGDEFVRGLSGGEKRRVSIAVELLTRPGLLLLDEPTTGLDSTNAARVVEVLAGLAGGGVNVLLSIHQPRPDVLRAMDRLLLLSGDGQVVYTGPTDRMREHFAALGYNLP 1852
BLAST of mRNA_D-mesarthrocarpus_Contig10522.1.1 vs. uniprot
Match: A0A250XNY5_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XNY5_9CHLO) HSP 1 Score: 189 bits (481), Expect = 9.910e-52 Identity = 119/246 (48.37%), Postives = 151/246 (61.38%), Query Frame = 1
Query: 10 STFTGILGPSGAGKSSLLDILAGRRKGAGCGWGASGHVVTGELRVNGEVAEGEGVRKISGYVTQEDILPPTLTCKEHLMFHALLRMGRAKKKEREG----------------------RVLELLEELGLSGVQRSLIGGGLRRGISGGEKRRLSIATELLNRPALIFLDEPTTGLDASTALRVAHILARLA-LGGTTVVASLHQPRREVLFLIDQVMLLS-RGQVAYFGSPWDAEKHFASIGNPFP 675
S ILGPSGAGK++LLDILAGR+ +G +V GE+RVNG+ E +R++SGYV QE +LP T + E+L FHA LRM RA + G RV +++EELGL V SLIG RG+SGGEKRR+SI ELL RP L+ LDEPTTGLD++ A RV ILA L+ G TV+ S+HQPR ++ L+D+VMLLS GQV Y G AE HF+++G P
Sbjct: 1380 SCLFAILGPSGAGKTTLLDILAGRK---------AGPLVGGEIRVNGQQTSAESIRRMSGYVHQEILLPGTSSVWEYLTFHASLRMPRAASPRKTGNELTGAAPALGPAAAAALAVRRRVSDVIEELGLQKVAHSLIGDEFVRGLSGGEKRRVSIGCELLTRPGLLLLDEPTTGLDSTNAARVVDILASLSHQQGVTVLLSIHQPRPDIFRLMDRVMLLSGEGQVVYTGPTTLAESHFSALGYTSP 1616 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10522.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10522.1.1 >prot_D-mesarthrocarpus_Contig10522.1.1 ID=prot_D-mesarthrocarpus_Contig10522.1.1|Name=mRNA_D-mesarthrocarpus_Contig10522.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=225bp TGPSTFTGILGPSGAGKSSLLDILAGRRKGAGCGWGASGHVVTGELRVNGback to top mRNA from alignment at D-mesarthrocarpus_Contig10522:1347..3613+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10522.1.1 ID=mRNA_D-mesarthrocarpus_Contig10522.1.1|Name=mRNA_D-mesarthrocarpus_Contig10522.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2267bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10522:1347..3613+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10522:1347..3613+ >mRNA_D-mesarthrocarpus_Contig10522.1.1 ID=mRNA_D-mesarthrocarpus_Contig10522.1.1|Name=mRNA_D-mesarthrocarpus_Contig10522.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=675bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10522:1347..3613+ (Discosporangium mesarthrocarpum MT17_79)back to top |