mRNA_D-mesarthrocarpus_Contig1052.3.10 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig1052.3.10
Unique NamemRNA_D-mesarthrocarpus_Contig1052.3.10
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig1052.3.10 vs. uniprot
Match: D8LMJ1_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMJ1_ECTSI)

HSP 1 Score: 585 bits (1507), Expect = 1.390e-195
Identity = 446/710 (62.82%), Postives = 541/710 (76.20%), Query Frame = 1 
Query:    1 KLVSLRLVGLGLTEVPSNIGAHLWSLHTVSFASNQLTELPDSLCDLTALKELNLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRMMCSTLSISSNRLVGLPHCIKDMQHLXXXXXXXXXXXXXXXXXXKSKSITEIHLCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGNKMVYPPVEVVLGGCKAVRVWCSRRLEDRIEARKHTIVMTFQDLLKQVHRNRGLANPAFFEGDVQIGSNK-YDHYYALVYDKFWDEMLPALEKASRARGTTEWAEDISGPRGRGTSFDYTREEVDRVLREYRDPAGRVMRTQMQTFRRCGCIDAQGRRRVCVPPKVGWMCERKATLIKHDIILEREQAERQKQVAEQEDIDFRIQLAKKIVKEHAETPEGKIEYARKAIKIAEELTRQKEASSTRHIINWRLGEFASEADALVSHRKEVLKKKFASTREGIVKEREHRVNDIQAKISSLKEEAEKLRGWGRDQKEAEIDKAVKSLQALPEDKKLEEVDQQLQEELRKLDENVSLLCAGLQEGLGGVLNTVKRSDKKFQELVTEMTIDLVEQDMEREGEAADRKHVALQVSMVVLRRIMAMWVGLGMRDVFSDWKTWTKRRIRQRRKDARQARALRQAWHQYEADKVVVVMAEWKLSFWEEHWDEYNDCQYWTHR 2127
            K+V+LRLVGLGLTEVP  IG +L SL ++S +SN L E+PD LCDLTAL      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRM C  L++S+N+L GLPHC+KDM  L      XXXXXXXXXXXX            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  N MVYPP EV+L GC  VR WC RR+ DR+ AR+HTIVM  QD+LKQ+H  RGL +PAFFE DV++G N+  DH+YALVY++FWD MLPALE+        EW    + PRG  TSF Y+REEVD VL +YRDP GRV+RT+ Q FRRCGC+ A GRRRVCVPPKVGWMCERKATLIKHDIILEREQ ER++Q  E+EDI+FR+ LA+++VKE +ET EGK  Y +KAI++AE L ++K+           +G+F SEA+A+ +HR++V++KKF+  ++ + KEREHR+ D++ K++ L+EE   LRGWG++QKEA+ID+ + S+  LPEDKKL EV+QQL+EE+ KL+E  +++       + G    VKR DK+FQE+V EM +DLV QDME  GE+A RK    +    V RRIMAMW+G+GMR+ F++WK WTK+RI QRRKDAR  +ALR+AWH YEA  VV VMAEWK SFWEE +D Y D Q W H+
Sbjct:  166 KIVNLRLVGLGLTEVPGAIGQNLLSLKSLSLSSNALEEIPDGLCDLTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRMKCRWLNVSNNKLAGLPHCLKDMPRLTKISAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNDMVYPPKEVILQGCDRVRAWCYRRMHDRVIARQHTIVMAVQDILKQIHE-RGLGHPAFFEPDVEVGMNEGTDHFYALVYERFWDTMLPALER--------EWQTGTAAPRGAVTSFGYSREEVDSVLLDYRDPTGRVLRTKTQMFRRCGCMGANGRRRVCVPPKVGWMCERKATLIKHDIILEREQEERRRQATEREDIEFRVTLARRLVKEGSETIEGKKNYTKKAIRMAEALKKKKQ-----------MGDFESEAEAMKAHRRQVVEKKFSKRKDALNKEREHRLADLKLKVAGLQEELVSLRGWGKEQKEAQIDQVLASMATLPEDKKLAEVEQQLEEEVAKLEEKAAMVATQKARKVMG--KKVKRGDKEFQEIVDEMVVDLVLQDMEAAGESARRK---AEQEHEVFRRIMAMWLGVGMRESFAEWKIWTKKRISQRRKDAR--KALREAWHDYEAAGVVSVMAEWKASFWEEEYDIYTDTQTWRHK 848
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig1052.3.10 vs. uniprot
Match: A0A6H5KAI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAI0_9PHAE)

HSP 1 Score: 546 bits (1406), Expect = 8.630e-182
Identity = 293/531 (55.18%), Postives = 385/531 (72.50%), Query Frame = 1 
Query:  649 NKMVYPPVEVVLGGCKAVRVWCSRRLEDRIEARKHTIVMTFQDLLKQVHRNRGLANPAFFEGDVQIGSNK-YDHYYALVYDKFWDEMLPALEKASRARGTTEWAEDISGPRGRGTSFDYTREEVDRVLREYRDPAGRVMRTQMQTFRRCGCIDAQGRRRVCVPPKVGWMCERKATLIKHDIILEREQAERQKQVAEQEDIDFRIQLAKKIVKEHAETPEGKIEYARKAIKIAEELTRQKEASSTRHIINWRLGEFASEADALVSHRKEVLKKKFASTREGIVKEREHRVNDIQAKISSLKEEAEKLRGWGRDQKEAEIDKAVKSLQALPEDKKLEEVDQQLQEELRKLDENVSLLCAGLQEGLGGVLNTVKRSDKKFQELVTEMTIDLVEQDMEREGEAADRK----HVALQVSMVVL-----------RRIMAMWVGLGMRDVFSDWKTWTKRRIRQRRKDARQARALRQAWHQYEADKVVVVMAEWKLSFWEEHWDEYNDCQYWTHRDSGEIRYGEVPSLVEYIPEGYK 2193
            N MVYPP E++L GC  VR WC RR+ DR+ AR+HTIVMT QD+LKQ+H  RGL +PAFFE DV++G N+  DH+YALVY++FWD MLPALE+        EW    + PRG  TSF Y+REEVD VL +YRDP GRV+RT+ Q FRRCGC+ A GRRRVCVPPKVGWMCERKATLIKHDIILEREQ ER++Q  E+EDI+FR+ LA+++VKE +ET EGK  Y +KAI++AE L ++K+           +GEF SEA+A+  HR++V++KKF+  ++ + KEREHR+ D++ K++ L+EE   LRGWG++QKEA+ID+ + S+  LPED+KL EV+QQL+EE+ KL+E V+++       + G    VKR DK+FQE+V EM +DLV QDME  GE A RK    H A      ++           RRIMAMW+G+GMR+ F++WK WTK+RI QRRKDAR  +ALR+AWH YEA  VV VMAEWK SFWEE +D Y D Q W H+++G++R    P++ E+IP+GY+
Sbjct:   81 NDMVYPPKEIILQGCDRVRAWCHRRMHDRVSARQHTIVMTVQDILKQIHE-RGLGHPAFFEPDVEVGMNEGTDHFYALVYERFWDTMLPALER--------EWQTGTAVPRGAVTSFGYSREEVDSVLLDYRDPTGRVLRTKTQMFRRCGCMGANGRRRVCVPPKVGWMCERKATLIKHDIILEREQEERRRQATEREDIEFRVALARRLVKEGSETIEGKKSYTKKAIRMAEALKKKKQ-----------MGEFESEAEAMKVHRRQVVEKKFSKRKDALNKEREHRLADLKLKVAGLQEELVSLRGWGKEQKEAQIDQVLASMATLPEDRKLAEVEQQLEEEVAKLEEKVAMVATQKARNVMG--KKVKR-DKEFQEIVDEMVVDLVLQDMEAAGENARRKAEQEHEARLWKQFIIPSFQSDAPRVFRRIMAMWLGVGMRESFAEWKIWTKKRISQRRKDAR--KALREAWHNYEAAGVVSVMAEWKASFWEEEYDIYTDTQTWRHKETGDVRTVR-PTVEEFIPDGYE 585
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig1052.3.10 vs. uniprot
Match: A0A7S4A2F7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A2F7_9STRA)

HSP 1 Score: 201 bits (511), Expect = 2.830e-50
Identity = 251/734 (34.20%), Postives = 381/734 (51.91%), Query Frame = 1 
Query:    4 LVSLRLVGLGLTEVPSNIGAHLWSLHTVSFASNQLTELPDSLCDLTALKELNLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRMMCSTLSISSNRLVGLPHCIKDMQHLXXXXXXXXXXXXXXXXXXKSKSITEIHLCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-EGNK-MVYPPVEVVLGGCKAVRVWCSRRLEDRIEARKHTIVMTFQDLLKQVHRNR-GLANPAFFEGDVQIGSNKYDHYYALVYDKFWDEMLPALEKASRARGTTEWAEDISGPRGRGTSFDYTREEVDRVLREYRDPAGRV-MRTQMQTFRRCGCIDAQGRRRVCVPPKVGWMCERKATLIKHDIILEREQAERQKQVAEQEDIDFRIQLAKKIVKEHAETPEGKIEYARKAIKIAEELTRQKEASSTRHIINWRLGEFASEADALVSHRKEVLKKKFASTREGIVKEREHRVNDIQAKISS-LKEEAEKLRGWGRDQKEAEIDKAVKSLQALPEDKKLEEVDQQLQEELRKLDENVSLLCAGLQEGLGGVLNTVKRSDKKFQELVTEMTIDLVEQDMEREGEAADRKHVALQVSMVVLRRIMAMWVGLGMRDVFSDWKTWTKRRIRQRRKDARQARALRQAWHQYEADKVVVV-MAEWKLSFWEEHWDEYNDCQYWTHRDSGEIRYGEVPSLVEYIPEG 2187
            L +LR V  GL   P   G  L  L  ++ ASN+LTELPDS+CDL         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  RM C TLS + N+LV LP C+ +M +L    XXXXXXXXXXXXXX       + LC+                                             + N  M YP  + +L G +AVR W  +R +  + ARKH +V T QD ++Q    R  +A+  +FE  V+     +   + +V+DKFWDEMLP L  A        WAE     + R T+  ++R EV +VL +Y+D  G+V M+ Q+  F+RC C+DA G ++VCVPPK GWMC+R+A L K  +IL+RE+    ++  E+  I   ++ A+        + EG   + ++A+K A       E    R I      EF    D  +  +   ++K+F    + +   R     ++  ++   L+ +     G+ ++  + +I + + +L+ +PED+ +   ++  Q  ++   +N          G+  +      +     EL  E++ DL  + ++++ + A+ +   ++     +R+I   W G+G  +VF  W+ W +R  ++R KD   A+     W    AD V  + +A+W +  +++  DE++D  YW HR++G +   + P++   +P G
Sbjct:  244 LKALRFVAHGLDRFPERAGKELTQLTQLTLASNRLTELPDSICDLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSRMTCHTLSFNHNKLVALPRCLANMINLTALSXXXXXXXXXXXXXXXXXXXXTVKLCANIIEELPESISRLPRLKSLWLDHNAPMAALPWNFYMLTSLVELRMDANPGMKYPTPDTLLQGAEAVRNWFRKRQKQALFARKHRVVATMQDFMEQCGEVRPSIAHQGYFEAGVERSGAVW---FQVVWDKFWDEMLPGLRDA--------WAEKRVD-KHRVTAMPFSRSEVQKVLEDYKDAEGKVYMKDQVCMFKRCRCVDADGNKKVCVPPKPGWMCKRRADLFKCRVILQREKRMMDERKREEAAIQQAVENARVAATAFCHSEEGIQRFRKRAVKRA-----AIEMDERRRI------EFNENYDNKLKAKLARIEKRFDDKDKKLRARRGKAEAELYKRLKDDLEPKESTTEGYAQETIKRQIKEVLTTLKNMPEDRDIRYNERARQRAIKAAQKNRDSKEWHKAVGIMKLFEPASTNLLAEAELAQELSHDLHTRYIDKQLKKAEAE---VRKEHAAMRKISGAWSGMGALEVFRGWRKWARREAKRRAKDVFCAQRDELKWA---ADCVAALELAQWTVDKYDKFVDEWSDEPYWVHRETG-VTVWDEPNVESLLPPG 947
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig1052.3.10 vs. uniprot
Match: A0A835ZAZ8_9STRA (Cyclic nucleotide-binding domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAZ8_9STRA)

HSP 1 Score: 133 bits (335), Expect = 2.480e-28
Identity = 73/167 (43.71%), Postives = 97/167 (58.08%), Query Frame = 1 
Query: 1753 VKRSDKKFQELVTEMTIDLVEQDMEREGEAADRKHVALQVSMVVLRRIMAMWVGLGMRDVFSDWKTWTKRRIRQRRKDARQARALRQAWHQYEADKVVVVMAEWKL--------------------SFWEEHWDEYNDCQYWTHRDSGEIRYGEVPSLVEYIPEGYK 2193
            V+R+D  F ELV E+  D V  DMEREG AA R          VLRR+M +W+G+GMR+ F+DWK WTKRRI+ RR+D  QA  +RQAW +YE + V + MA W +                    S W E WD YND  +W H  +G IR+ + P++ EY+P GY+
Sbjct:  128 VQRNDAAFLELVAELIADGVAADMEREGAAARRSGAE---EHAVLRRVMGLWLGMGMREAFADWKAWTKRRIKLRRRDRHQA--VRQAWQRYETNSVAMEMARWNVGKRRQSPHSLPHLRLRTRARSQWSEQWDAYNDVPFWVHATTGAIRW-DPPTVPEYLPPGYQ 288
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig1052.3.10 vs. uniprot
Match: A0A7S3MDR4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MDR4_9STRA)

HSP 1 Score: 122 bits (307), Expect = 6.490e-25
Identity = 103/359 (28.69%), Postives = 179/359 (49.86%), Query Frame = 1 
Query:  643 EGN-KMVYPPVEVVLGGCKAVRVWCSR-RLEDRIEARKHTIVMTFQDLLKQVHRNRGLANPAFFEGDVQIGSNKYDHYYALVYDKFWDEMLPALEK---ASRARGTTEWAEDISGPRGRGTSFDYTREEVDRVLREYRDPAGRVMRTQMQTFRRCGCIDAQGRRRVCVPPKVGWMCERKATLIKHDIILEREQAERQKQVAEQEDIDFRIQLAKKIVKEHAETPEGKIEYARKAIKIAEELTRQKEASSTRHIINWRLGEFASEADALVSHRKEVLKKKFASTREGIVKEREHRVNDIQAKISSLKEEAEKLR-GWGRDQKEAEIDKAVKSLQALPEDKKLEEVDQQLQEELRKLDENV 1701
            EGN  M+ PP EV+  G  AV  +     L D++ AR   +V+  Q++LKQ+ + R  A+ A+FE D Q      D ++AL     W ++LP L++   + RA          +      TSFDY+ +EV   L  Y D  G V+R Q   FRRC C+D++ +RR CVPP  G+MC R   L+K +++ ER++ +R  Q  + + +   ++ A    K + ++ EG++     A + AEE+      S    +I  R           V ++K+ +  ++   +  + K R+ ++  I++++ +LKE+    + G+ R+  E  I      L  LPE  +L+++    + +   LDE +
Sbjct:  213 EGNVTMLDPPPEVMGQGGPAVVAYLKAIYLNDKV-ARMREVVLATQNVLKQI-QERDFADSAYFEPDYQRTDKDLDRWFALQLPYLWKDLLPQLKRTWESERAAMGHHRRHKHAAASDDLTSFDYSEQEVMHALTNYSDAVGPVLRMQKAMFRRCACVDSEMKRRPCVPPAPGYMCLRDCVLLKKELVRERDKHDRMWQAYKSDGMRDAMKRADYEAKLYLDSAEGQLWLENTAYEQAEEVLLD---SGANVVIEKRFQG--------VENKKKKVVARYDQKKLKVQKVRDRKIQQIESQLETLKEDRRLAKEGYVRNAVEQRIQSLTVQLAHLPETSELQQLQNDCERDCSLLDEGL 558
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig1052.3.10 vs. uniprot
Match: A0A7S1BRV4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BRV4_9STRA)

HSP 1 Score: 119 bits (299), Expect = 4.090e-24
Identity = 143/541 (26.43%), Postives = 233/541 (43.07%), Query Frame = 1 
Query:  643 EGN-KMVYPPVEVVLG-GCKAVRVWCSRRLEDRIEARKHTIVMTFQDLLKQVHRNRGLANPAFFEGDVQIGS-------NKYDHYYALVYDKFWDEMLPALE--KASRARGTTEWAEDISGPRGRGTSFDYTREEVDRVLREYRDPAGRVMRTQMQTFRRCGCIDAQGRRRVCVPPKVGWM------CERKATLIKHDIILEREQAERQKQVAEQEDIDFRIQLAKKIVKEHAETPEGKIEYAR------KAIKIAEELTRQKEASSTRHIINWRLGEF--ASEADALVSHRKEVLKKKFASTREGIVK-EREHRVNDIQAKISSLKEEAEKLRGWGRDQKEAEIDKAVKSLQALPEDKKLEEVDQQLQEELRKLDENVSLLCAGLQEGLGGVLNTVKRSD-KKFQELVTEMTIDLVEQDMEREGEAADRKHVALQVSMVVLRRIMAMWVGLGMRDVFSDWKTWTKRRIRQRRKDARQARALRQAWHQYEADKVVVVMAEWKLSFWEEHWDEYNDCQYWTHRDSGEIRYGEVPSLVEYIPE 2184
            EGN  MV P +E++   G   +R W   R +  I   +  +VM  QD+L ++   R     A   G V + S       +  + +Y     + W   +P+L+  K  +  G T+              F Y R E    L  + D AGR+M     +F  C C  A   + +  PPK   +      C R   L+K  ++L RE AER++  AE   I+    +A+ + K   +T EGK    R      K +K AE+    +E SS        + E+    + + L   R ++ KK     R  + K +R ++ ND  A I+S  E               EID   K  +     K+L  +++Q++  + +  +    +     +     L T    + KK + L+  +  + VE+++    +   R +          R++M  W+ L + + F  WK+WTK R+ Q+R++ R A  L  A   YE     +V+A  KL  W EHWD++ND  +W H D+GE  + E P L  Y+PE
Sbjct:  408 EGNVSMVNPHLELIQEKGVDGIRKWSECRADMDIHVFRRNLVMALQDVLAKMDTVRKKGEWA---GRVPLDSLLKSGVIHNEEEWYQFPESRLWSSFIPSLDDDKQEQENGNTK---------NYCVHFPYDRAETMVALEHFEDAAGRIMHKTRGSFDICSC--ATPCKTMQSPPKNDGLRQAHTCCTRNVLLVKKKLLLVREVAERKRVQAENFRIEENATIAEIVAKNFLKTEEGKEMVQRLAKTRYKEMKQAEKAAMFQEKSSA-------IAEYDRVKDEERLKKKRFQLRKKYDEKERYLLEKIQRSNKDNDDGAVINSRLEH--------------EIDDLRKDYE-----KRLALLERQMEASVIRRQKRKEKIMKTWVDFKHRFLGTAPSEESKKVKHLIMNVETEFVEREVSTSRKKTMRNNETY-------RKVMLRWLDLCLYERFDAWKSWTKERLVQKRREVRAANQL--ARINYEDSLAYIVLANDKLQKWTEHWDDFNDMPFWVHGDTGETVW-EEPVLELYLPE 898
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig1052.3.10 vs. uniprot
Match: A0A7S2D150_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D150_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 3.650e-17
Identity = 49/114 (42.98%), Postives = 72/114 (63.16%), Query Frame = 1 
Query:  991 SFDYTREEVDRVLREYRDPAGRVMRTQMQT-FRRCGCIDAQGRRRVCVPPKVGWMCERKATLIKHDIILEREQAERQKQVAEQEDIDFRIQLAKKIVKEHAETPEGKIEYARKA 1329
            SF + R EVD V++ + DP G V  T   T FRRC C+D  G+RRVCVPPK GWMC+R A L K +I LE E+  R+ + A++++++     A+   + + E+ EG+I + R A
Sbjct:   27 SFPFERTEVDHVMKTFVDPYGPVSMTNEDTLFRRCCCVDESGKRRVCVPPKKGWMCKRTAFLFKMEICLETEKKARELKKAQEKEVESAGIAAETFARTYCESDEGQIYFRRLA 140
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig1052.3.10 vs. uniprot
Match: A0A482SUE5_9ARCH (Leucine-rich repeat domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SUE5_9ARCH)

HSP 1 Score: 62.0 bits (149), Expect = 1.960e-6
Identity = 31/94 (32.98%), Postives = 57/94 (60.64%), Query Frame = 1 
Query:  646 GNK-MVYPPVEVVLGGCKAVRVWCSRRLEDRIEARKHTIVMTFQDLLKQVHRNRGLANPAFFEGDVQIGSNKYDHYYALVYDKFWDEMLPALEK 924
            GN+ ++ PP E+++ G K V  +C        + R   I++T Q++L+Q+  +RG+ +PAFFE + +IGSN  D +  L    FW++++P + +
Sbjct:  275 GNEALLDPPSEILIEGAKRVVKFCFDTYMSDKQGRMRHIILTSQNVLQQI-ADRGVYDPAFFEPEARIGSNAEDLWVGLQLTHFWNDLIPRMNQ 367
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1052.3.10 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LMJ1_ECTSI1.390e-19562.82Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5KAI0_9PHAE8.630e-18255.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4A2F7_9STRA2.830e-5034.20Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A835ZAZ8_9STRA2.480e-2843.71Cyclic nucleotide-binding domain-containing protei... [more]
A0A7S3MDR4_9STRA6.490e-2528.69Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S1BRV4_9STRA4.090e-2426.43Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A7S2D150_9STRA3.650e-1742.98Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A482SUE5_9ARCH1.960e-632.98Leucine-rich repeat domain-containing protein n=1 ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1052contigD-mesarthrocarpus_Contig1052:12998..24357 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LMJ1
Preferred nameLRCH1
PFAMsCH,LRR_8
Model size2211
Max annot lvl2759|Eukaryota
KEGG koko:K09506,ko:K10641
Hectar predicted targeting categoryother localisation
GOsGO:0002682,GO:0002683,GO:0002685,GO:0002686,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0007154,GO:0007165,GO:0008150,GO:0009987,GO:0010033,GO:0016020,GO:0023052,GO:0030334,GO:0030336,GO:0032879,GO:0034097,GO:0034260,GO:0040012,GO:0040013,GO:0042221,GO:0043086,GO:0043087,GO:0044092,GO:0044424,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051270,GO:0051271,GO:0051336,GO:0051346,GO:0051716,GO:0065007,GO:0065009,GO:0070887,GO:0071310,GO:0071345,GO:0071944,GO:1990868,GO:1990869,GO:2000145,GO:2000146,GO:2000401,GO:2000402,GO:2000404,GO:2000405
Exons22
Evalue2.28e-196
EggNOG OGsCOG4886@1|root,KOG0619@2759|Eukaryota
EC2.3.2.27
Descriptionregulation of response to stimulus
Cds size2211
COG categoryU
BRITEko00000,ko01000,ko03009,ko03110,ko04121,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789188.6130989-CDS-D-mesarthrocarpus_Contig1052:12997..130821680789188.6130989-CDS-D-mesarthrocarpus_Contig1052:12997..13082Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1052 12998..13082 -
1680789188.6232586-CDS-D-mesarthrocarpus_Contig1052:14192..143171680789188.6232586-CDS-D-mesarthrocarpus_Contig1052:14192..14317Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1052 14193..14317 -
1680789188.6337895-CDS-D-mesarthrocarpus_Contig1052:14653..147731680789188.6337895-CDS-D-mesarthrocarpus_Contig1052:14653..14773Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1052 14654..14773 -
1680789188.6422744-CDS-D-mesarthrocarpus_Contig1052:15095..151401680789188.6422744-CDS-D-mesarthrocarpus_Contig1052:15095..15140Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1052 15096..15140 -
1680789188.6517596-CDS-D-mesarthrocarpus_Contig1052:15301..153851680789188.6517596-CDS-D-mesarthrocarpus_Contig1052:15301..15385Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1052 15302..15385 -
1680789188.661574-CDS-D-mesarthrocarpus_Contig1052:16132..162791680789188.661574-CDS-D-mesarthrocarpus_Contig1052:16132..16279Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1052 16133..16279 -
1680789188.673125-CDS-D-mesarthrocarpus_Contig1052:16535..166161680789188.673125-CDS-D-mesarthrocarpus_Contig1052:16535..16616Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1052 16536..16616 -
1680789188.6894147-CDS-D-mesarthrocarpus_Contig1052:17206..173321680789188.6894147-CDS-D-mesarthrocarpus_Contig1052:17206..17332Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1052 17207..17332 -
1680789188.7055395-CDS-D-mesarthrocarpus_Contig1052:17892..179881680789188.7055395-CDS-D-mesarthrocarpus_Contig1052:17892..17988Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1052 17893..17988 -
1680789188.7189302-CDS-D-mesarthrocarpus_Contig1052:18410..184981680789188.7189302-CDS-D-mesarthrocarpus_Contig1052:18410..18498Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1052 18411..18498 -
1680789188.7299626-CDS-D-mesarthrocarpus_Contig1052:18785..188591680789188.7299626-CDS-D-mesarthrocarpus_Contig1052:18785..18859Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1052 18786..18859 -
1680789188.7408826-CDS-D-mesarthrocarpus_Contig1052:19330..193821680789188.7408826-CDS-D-mesarthrocarpus_Contig1052:19330..19382Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1052 19331..19382 -
1680789188.7535746-CDS-D-mesarthrocarpus_Contig1052:19682..198221680789188.7535746-CDS-D-mesarthrocarpus_Contig1052:19682..19822Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1052 19683..19822 -
1680789188.7654421-CDS-D-mesarthrocarpus_Contig1052:20266..204171680789188.7654421-CDS-D-mesarthrocarpus_Contig1052:20266..20417Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1052 20267..20417 -
1680789188.7745504-CDS-D-mesarthrocarpus_Contig1052:21012..211521680789188.7745504-CDS-D-mesarthrocarpus_Contig1052:21012..21152Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1052 21013..21152 -
1680789188.7877383-CDS-D-mesarthrocarpus_Contig1052:21366..214311680789188.7877383-CDS-D-mesarthrocarpus_Contig1052:21366..21431Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1052 21367..21431 -
1680789188.7971451-CDS-D-mesarthrocarpus_Contig1052:21809..219191680789188.7971451-CDS-D-mesarthrocarpus_Contig1052:21809..21919Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1052 21810..21919 -
1680789188.806805-CDS-D-mesarthrocarpus_Contig1052:22689..227901680789188.806805-CDS-D-mesarthrocarpus_Contig1052:22689..22790Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1052 22690..22790 -
1680789188.8219438-CDS-D-mesarthrocarpus_Contig1052:23116..232551680789188.8219438-CDS-D-mesarthrocarpus_Contig1052:23116..23255Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1052 23117..23255 -
1680789188.834249-CDS-D-mesarthrocarpus_Contig1052:23570..236181680789188.834249-CDS-D-mesarthrocarpus_Contig1052:23570..23618Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1052 23571..23618 -
1680789188.8437698-CDS-D-mesarthrocarpus_Contig1052:23929..240251680789188.8437698-CDS-D-mesarthrocarpus_Contig1052:23929..24025Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1052 23930..24025 -
1680789188.8527906-CDS-D-mesarthrocarpus_Contig1052:24259..243571680789188.8527906-CDS-D-mesarthrocarpus_Contig1052:24259..24357Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1052 24260..24357 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1052.3.10prot_D-mesarthrocarpus_Contig1052.3.10Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig1052 12998..24357 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig1052.3.10

>prot_D-mesarthrocarpus_Contig1052.3.10 ID=prot_D-mesarthrocarpus_Contig1052.3.10|Name=mRNA_D-mesarthrocarpus_Contig1052.3.10|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=737bp
KLVSLRLVGLGLTEVPSNIGAHLWSLHTVSFASNQLTELPDSLCDLTALK
ELNLQRNKLRALPDRFGNLLKLDEIYLTSNRLESLPPSFGNLTRLRRLVL
DCNRLRRLPETLGRMMCSTLSISSNRLVGLPHCIKDMQHLKVLSANDNGL
HSLPSDIGKSKSITEIHLCSNRLNQLPDSICQLGTLQMLWLDHNCISALP
MNFHKLRGLQRLLLEGNKMVYPPVEVVLGGCKAVRVWCSRRLEDRIEARK
HTIVMTFQDLLKQVHRNRGLANPAFFEGDVQIGSNKYDHYYALVYDKFWD
EMLPALEKASRARGTTEWAEDISGPRGRGTSFDYTREEVDRVLREYRDPA
GRVMRTQMQTFRRCGCIDAQGRRRVCVPPKVGWMCERKATLIKHDIILER
EQAERQKQVAEQEDIDFRIQLAKKIVKEHAETPEGKIEYARKAIKIAEEL
TRQKEASSTRHIINWRLGEFASEADALVSHRKEVLKKKFASTREGIVKER
EHRVNDIQAKISSLKEEAEKLRGWGRDQKEAEIDKAVKSLQALPEDKKLE
EVDQQLQEELRKLDENVSLLCAGLQEGLGGVLNTVKRSDKKFQELVTEMT
IDLVEQDMEREGEAADRKHVALQVSMVVLRRIMAMWVGLGMRDVFSDWKT
WTKRRIRQRRKDARQARALRQAWHQYEADKVVVVMAEWKLSFWEEHWDEY
NDCQYWTHRDSGEIRYGEVPSLVEYIPEGYKAGHSL*
back to top

mRNA from alignment at D-mesarthrocarpus_Contig1052:12998..24357-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig1052.3.10 ID=mRNA_D-mesarthrocarpus_Contig1052.3.10|Name=mRNA_D-mesarthrocarpus_Contig1052.3.10|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=11360bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1052:12998..24357- (Discosporangium mesarthrocarpum MT17_79)
AAGTTGGTCTCCCTTCGCCTGGTTGGCCTCGGGCTGACAGAGGTGCCCAG
CAACATCGGGGCCCACCTGTGGTCCCTCCACACGGTTTCGTTCGCGAGGT
GAGACGAGACCTATGGCGATGGACCGCGTCGAAATGGACAGCCGCAGCGT
CGTGTGTGAATTGTTGTTCTCGAGGAGAGAGCCTCTCCCCCCAGCGCGCC
TGTCTGCGGCCAACCGCTGCGAAAAACGCCTCCATTCTTGTGGTCATCCC
ATCGTCTCTGTTGCCTATGCCTGTGACGCTTCGATCCGACCCATTTCATG
TCTTTGCATTGCCGCCCACGGGCGTCTGCCAGCAACCAGCTCACTGAGCT
CCCTGATAGTCTGTGTGATCTCACGGCCTTGAAGGAGCTGAACCTGCAGA
GGAACAAGCTAAGGGCCCTCCCCGACAGGTGCATAGATGTTGGCGAGAAA
AGGAGCTTCTTGTGCGAGTGAATTAAAACAGTACCATCTTGAATTTCTGT
TTCCTTGCTGAGATCACAATGTTCGGCAGACTTTAGGGTGACGGGCTTCA
AACATTGAGAGTTTATTCTGAGGCGGTGCTTGTGTGTACATCGGTGAAGT
CTGTCCCAACGAATGTCAAATGGTTGGCAGGGCTAAAGTAAAGGTGTTTC
CTCATGGGAATGGAGATCAGAACAGGGGAAAATGCTGTGTTCTGCCTATT
TTCCTCAGTCGCATCCTAATCTTGTACCCCTGTGGCCAGGTTTGGCAACC
TCCTGAAGCTGGATGAAATCTATCTTACCAGCAACAGGTTTGTGCATATA
TATACTTGTACTAAGAAGTGTATGCTTCTCCAATTTCCACTGGTTATGAT
TTAGTGTGTGACTGTTGAAGTCAATGCCACTCTGGACAGGGTTAAGACCT
TTGTGAAACGTCTCACAGAAAACTTCAGCTTGCTTTCAGACCCCAAAGAA
ACCTGTTCTTGCGATATTCCTCTCAAGCAAGTGCTTGAACAAGCACTTTG
AAGTAGTGGTCTTAGTTACAGGGTATTGCTTAGGCCGTATTCTGTCTCAT
GAATTTCCTCTCCATAAAACACCTAACCCCCTCTTCAACGAAATCCGTCC
AGGCTCGAGTCTTTGCCGCCTTCCTTTGGCAACCTTACTCGACTGAGAAG
ACTGGTGCTGGACTGCAACCGCCTGCGAAGATTGCCGGAGACCCTTGGGA
GGATGATGTGCTCTACTCTCAGCATCAGTTCCAACCGCCTGGTGCGCAGC
TCTGCTTGCTTGTGGTTTAAAAAAAGAGGCAGTGTGCCCGGAACTGCTGT
GCATCCTTTGGTGTGGCCACGCTGTTTCAGCTGGATGGCTCACACTTTAC
TTCTTGTCCCCATTCATTGAGAAGCTGAAGGCCCAATGATACTGACTGAC
AACACTTGAAAAGCTCTTGACCATGGTTCTCCAGGGTCTGACCCTTATAG
GTTCTGTGAGATTTATGTCGGTTGCCAATGAAGCACAGGGGTCCGAGTTC
TTCTGGTTCAATCTTGCTTGCTTACCGCAAGTGGACTGTTGTGCAACTGG
GTTCTTCTGTGTTGTAGGTCGGACTCCCCCACTGCATCAAGGACATGCAA
CACCTCAAGGTGCTGTCTGCAAATGACAACGGCCTTCACTCACTTCCGTC
AGACATTGGCAAATCCAAGTAAGGGGTGCTCTACCTGATGCTTCCAAGTG
CTGGGTACACTGATACATTATGGTTAACAACATGCCGCCAAATAAAGCTC
AAGAGTCACTTGTTATTATACTTCCAAAAAAAATCCAGATTAGAAAAAGA
AAGAAGGCTCAGGTATTGCGTTGAGGGCAGTGGGGCACGTGAAACCTCTC
AAGCTGTTTGTGTGGAAGAGGGATGAAGTGGAAGGCGTTCGTGAGTCAGG
GACGTCCTAGTTGTGTTTTGTGATGATGGGCTGGATTTTACCAGCATTGG
TGAGCCCTAGTTCAGTGTATACTCCGAGACAACCATTGTTCACAACGCAC
GGCAGAAATGCCTTAAGGCCTTTATATCAGCGAAAAAAATTGAAAATAGT
AAAAAAAATGGCACCACGATATAGGGTGCCAGTTGTAGAAATGAATCACC
CGGAGAAATATATTTATAGTCAAACATGTGACCAAGCGATCTCCGTGTTG
TGTTTGTTCTTGGTGTTTGCTTACCAGGGCTGCATGCCACCCCCTAAGCC
CCAAGTGATTCGATTGAAAAAACGTCCCATTTGAGTATCCATGAAGTAAT
ATTTTGAAGGGAAGCCCACACGCCAGAAACCAACGATGAAGAAGATGCAA
CAAACAATCACCTCCTGCACATTGGCCAAACATAGGAAGGAAATTCTCAT
GGTTTGAAGAAGAACGGCGAATGTTTTGAAACACCCAAATTCTCAGCCAG
ACTGTTCTCGTTCTTGCTTTGATTTTTTCCAAAAACAGATCGATCACAGA
AATCCATCTCTGCTCCAATCGGCTGAACCAGCTGCCAGATAGCATCTGCC
AGTTGGGGACCCTCCAAATGCTCTGGCTCGACCATAACTGCATTTCCGGT
AAAATGGGCCCAATCCTGAGAAATGATGAGTTGTCTGTTTCTTTGGACCC
CATAGATTCGTAGGAATAAATAATCTGAAGACAGATATTAAAAAACAATT
CGAGATGTGCAGTGCTTACTGGGAAGACGTGACTAAATCACACTGCCCTG
GAGTTTTTCTGAGGATCTGAGCCTTGGGGGACCTTATTTTTGACACCCAT
TGGAACAAATCATATACATAAATGCGCAGACACAATCCATTACTTCCAAC
ATTGAAGTAACGCTGACCCCCTTCACTGCATCTCTTCACCCAAGCCACCT
CGCACGGAAGGCCCTGCAGGCCGATGCTATGATCGACTTACTTGCCACTC
TCGCATTTCATGTTTCCGGTGCTCAGCATTACCCATGAACTTTCACAAAC
TGAGGGGGTTGCAGAGGCTACTGCTGGAGGGTAACAAGATGGTACGATAG
CGGCAGGCGTTATGGGCATGAAACCGAAATGGTAGCCATCATCCAATCAG
CAATTCCGGTAAACCATCTTCAGTCTGTTTCTAGGATTCCCGTCCTGATA
CCCTGGAAAACTGGCAGGTCCGCGTGTGCTCACGGTCGTAGTTGAGGTGC
CGCCTGAGACATGCACGAGGCTTCGAACTGCTCCCACCAACCCAATCTAA
ACAAGGTGTACCCCCCGGTGGAAGTGGTGTTAGGAGGGTGCAAAGCGGTG
AGGGTGTGGTGCAGCCGCCGCTTGGAAGACAGGATAGAGGCAAGAAAGCA
CACTATTGTGATGACATTCCAGGACCTACTTAAGCAGGTGCACAGGTGGA
CACCTTCCAGGAATGGAGTGGAACACTAGCGCGGCAAAGTTTGCATCAGC
TGGGTTATATGGCATGTGTCATTCTCAGCGGATCGGACTGATAGGAGGGT
TCCGTTCCAAGTCAAACGTTATCCCATCATTCAGGGGTATGTGGTGATCA
GGCGCCACCAAAAGGCCAGAAGGGAACAACTATGTGAAGACCCATGAAAG
TCGATAGACCCTGGCCTGTTTGACCGGAGGAAGAAAAGCTTGCCGCAGAG
AAATGCCTTCTACTTTCATGGGCTTCATGTTCTCGATGCTGTGGTTTGAG
TGTATGCCCATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTTTT
TGGAGCACCACATCACATGTGTTTGCTCCGCAGATTGCGGATTTAGGCTC
AAGTTACACCCACTATCTCTCTCAGTGATCTCAACCCCCCCGGAAGGAAT
CCCCACCCCACCTTCTGTAGCCAGTGTGTCCTCGGCGTAAAAGCCACATT
GGGTCAACAACACACTGCCTTGTCTACGGTGGCAGGTGAGGAATAGAGGC
CTCGCAAACCCGGCCTTCTTTGAGGGGGATGTGCAGATTGGCTCCAACAA
ATACGACCACTACTATGCTCTCGTCTACGACAAGTTCTGGGATGAAATGC
TTCCGGCCCTGGAGAAGGCAAGCAGAGCTAGAGGCACAACTGTAGGGGGA
GAACTATCGAATGGGCGGCCATGGCAGGGTGGTAGACGTGAGAAATCAAC
ATGAAAAATGACACCTTCAAGGCTGGGAGTGGAAGCAATGATTGAGGTGG
GGAAGAATTAGCAATAAGTTTTTTTTTTGCAGCTGTGGTTCACAAGAATG
TGAAAATAAAAAATGAGGCTCAGTGGGGGTCTTGCTAGGGCGGAAATGCA
GAAAGACTGGGCCAAACAGATCTCAGCGTCTAGAGAACAAAGACACTGGT
ACTGAGGTATTTCATTGCGGGTGTTCTGGATCTTGCTACTGTGTGAGGAT
TGAAGAAGCGTATTAATGCCACTAACCCTAACCCTATGTGAGATGCTTCG
GGAGATCCCAATGGAGCGATTTGGGTTGATGACAGGAACACGCAGATCTT
TTACTAACAGCTCCAAACATGCAAAAGTTGTGCAGGAATGGGCGGAGGAC
ATATCTGGGCCTCGAGGAAGAGGTACATCGTTTGACTACACAAGGGAGGA
GGTAGACAGAGTTCTGAGGGAGTACCGGGACCCAGCAGGAAGGGTTATGC
GTACACAGATGCAAACATTCAGAAGGTAAGCTTCATGCGTTAAAGATGCC
TTCACCTTATGGTGATCAATCAAGCTCCGAGCAAATTAGTTTGAAGGAGA
TGCTAGGTTCCAAGAGGATGTGAGGTTTAACGGGTGTCTGGGGCTCGACT
GGGGCCTTCAACAAGTGGGGTTGGTTGACTGGTGCGGCTTCGTAGTAGGA
AAAAACACACCTCACACTGCTAGGAAGCAAACACATTAGACTTGATGTAT
TTGACTCTGCATGCAACTCTGAGCCCCCACTCAGCATAGATATGTCTTCC
CTTGATCGTGCGTGGTCCACACAAGGTGCGGCTGCATTGATGCCCAGGGC
AGAAGGAGAGTTTGTGTGCCTCCTAAGGTGTGTGTTTCAGTCATACGCTG
GGCTACAGCCCTTTCCACATACCTTGCCCATTCTGTGTGGAGCCAAGCTG
TGCTGAAGTACTTCGAAGCACTCTGGACCCGTATTAAACATTCGCAGGAC
AAGGGACCTTTATAAATGAATAGATGTATGCACCTCTATAAATGAATGTT
CTTCGATGTATCTATATCTATATCTATATCTATATCTATATCTATATAGT
TCCGTTTTTATCCTCTGTCCCTCTATCGGTTACCTCCCTGCCACTTCAAA
GAATGCAGTGTACCTCCCGCCCCGGCACAACGCGGTAGATAAGATGGATG
CACCGCAGCAGATGCTCCTGAGATATAGATACCGCTGAGGCAGAGATGCC
GCTAAGACAGCCAGCCGCCCGTGAGGCGGATCCCAAGGCCTGCATGCTCC
TAAGATAGATTCAAACGTGGTTGTCCATTTGAATTGTGTTCTTCCCAGGT
TGGGTGGATGTGCGAACGCAAAGCCACTCTGATAAAGCATGACATCATCT
TGGAGCGGGAGCAAGCGGAGAGGTGGGAAGGTTTGGCCCTTGAGTGCCTT
TCAGAGTTGGAAACGCTCGTGCAGCGACGGCCAGGGCGAGACGTTGGTGC
TTCCCTCCCTTGTCGGACTCTCCTTTTCAAGCGCGCAGTAGACCCCTCGT
GTGGCTTGTTGGTAGTCTAGGAAAAACGTGCTTTTGCTGCCTCTTGCTTT
CGAGACCCCCGAGACCACTGTGGATGGTCGTCGTGTTCAGCTGTGTGCGA
GTGCGGGTCGACCCCTGAAACTGTGGCGTAACACCGAGGCATGACTTGAA
CCTTCCCAGGCAGAAGCAGGTTGCGGAACAAGAAGATATTGACTTCCGCA
TCCAGCTGGCCAAGAAAATCGTCAAGGAGCATGCAGAAACACCAGAGGTG
GGCGGGCAGATTGCTTGGAAGGGCGTTGGTTTCCCCATCTTGACCACGCG
AAGGCTTGGCAATGTATGGGTTGATCACAGCAAGTGGAAGCAGTCTTGTC
TGTCCAGTTGACAAGACTCTACTCAGAGTATAGGCCTAACCCTAACCCTA
ATCAGGATAAGGTTAGTCGGTTTGTAGAAAATTCGAATCTTGTGGAAGAG
TGTGCAGTGCAAAAGAGTATCTAGAAGTGACGTGAGGGAGAACAAAAGCC
GTGAAAGTCCCTTCCTGACATTTTTTTTTCATCTCCTGTATGGCCTCAGT
GTTGGTCATTCAACGTAGAACCGAGCTCTATTCCCCTTTTGCCTCGAAAT
CCCCCCCCCCCCTGCCTATCCCGCATCCGCCGTCGCTTTTGAACTGCTTT
GCCTACTTTGCCTTAACAGGGCAAGATCGAGTACGCAAGAAAAGCCATCA
AAATTGCGGAGGAACTGACTCGACAGAAAGAGGCAAGTTCAACTAGACAC
ATCATCAATTGGCGTGTGACGTGCCCTGAAGACAGGGAAGACAGAGAATG
CTCGTCGGTCTTTCCCTACCTCCCCGTCACCGCCTGTCCATAGGGCATGA
TCAACTATGCAATGAGGAATGTTACGTACTGAAGCCCCAGATTCTCTTGG
GCACCATGTAGATGGGAGTGCAGAAAACGCCTCTGAGACTGAGAAATGCA
TCTGGGTAAGCTCGGGTGCATTTTCTTGGCTTTCAAGTACTCATCCCAGG
GATGCCTTTGCTTCCCCTGCATTGGTCCATTTAATGTATAGCATAAGCGT
CTGGGGTAACATCAGCAATATCATCATCACGGGCGATACAAGAACGACTC
TCTGATTTAGTGCTGGCATTTCCCATGATACCAGTATTGCAGAAACAAGC
CGGCAAGTCTGGGACTATAACTACCGTATAATGCTGTTTTGTTTCACGCC
AATCCTTGTCCTGTGGATCACAGTGCCCACCTTCTACGGGGTGTCATGCA
TGAAGAATGTACAAACTGCTTCTTACAAATGTTCATCCACCTGGTAATTG
AAATTCCCTCACACGCTCATCACAGCTGGGGGAATTCGCCAGTGAGGCAG
ATGCACTGGTGTCACACCGGAAGGAAGTACTGAAGAAAAAGTTTGCCAGT
ACCCGAGAAGGTATTGTCAAGGAGAGGGAACATCGAGTCAACGATATACA
GGTGTGCAAGACGATACATGGGAATGGCATCAGAGTTCTGGTGGGAGGTT
AAACTGTGCTGGGTTTCCGCTATTTTATGCAGTTAGTGCATCTTTTCTCA
AGATGAAAGAGATGTGTGGATTGTGTGGGGTTGAAAGGACCTTGTAGGCA
TGATCTAGCCCCAAGACCTTTTCATTTGTTGTCCTTGGTGCTCGGGAGAA
TATTTAACATTGATTACTTTCCTTGCTGGCGTCCTTAAGCCAGAGGAAAC
AAGCATGTCTTGGCCAGAAGAGTCCGATAACTTCCCATCAATCTACTGGA
GCATTGCTTTCCTATGCAAGCGATGAAAATCAACCTGGCCGAGAGTCCAC
TGGTAAAGCCATGTTCAGATAAATATATTGAGTTTTTATGAAGGCGGTCT
GCCAAAAGAAGTGGAGAATATGGGTATCGATCCCATTACCTCTTCCATGC
CAAGGATAAAGCCGGAAAATGACCATTAGCGATTTTCACCACAGAGCTGA
CAGCAAGTGGGGGACTGAGTCGCCAACGCGATTCGTTTCGTTTTTTCCGT
CGAACCGGTTGGACTCCTCACCCTCCGGACTCATCCGAAAGGCCAAGATT
TCATCGCTGAAGGAGGAGGCTGAGAAGCTCCGAGGTTGGGGCAGGGACCA
GAAAGAGGCGGAGATTGACAAGGTTTGCTCGCACGAGTGTCGCCTCGGAC
ACCCGGTTCCCTTTGGCCCCAGTAGTAGCACACGAAGAAAACTCTGGTTT
GTTTCAGGGTGGACCTCAGGCCCACGGACACACGGAAAACGGTTGCGATT
GAGGCTCACGGCTGCTTGCTTCACCCTGCTCTTTTTTTTTTTTTTTTTTT
GAGCGGCGCTCCTTACTTCGTATAGAGGTGAAGACATGTGCATGTGCATG
CATAACACGCTGCTCCGTTTCATTCTAGGCGGTCAAGTCGCTTCAGGCGC
TTCCCGAGGACAAGAAGCTTGAGGAGGTTGACCAGCAGCTACAAGAGGAA
TTAAGGAAGCTGGATGAAAACGTAAGCTTGCTGTGTGCGGGTCTCCAAGA
GGGTCTTGGAGGAGTTTTGAATACAGTACATACATTGATGTGCCTTCTGC
TACAAGGTTGTCCTGTTTCTCAAACTGCAATAACGAGATTATTTTGAGTG
AATATTCCCGAGGCCGTAAGGAGCAGACCATCGAACAAAAAGAACTCTGT
CTCTGATCCCTCCTTCCTCTTGTGTTTCCTTGTCTCCCATTTGTTTCTGT
CACCTCAACCCTCTGAGTTTTTCCCTGGCACCCTGATACCACCCCCCTCT
ACGACAATCCAACCATTGGACGTCCTCTTTCCCTTCCCCCCACCCCCAAA
TTTGCGTGGGTGGCAAAAGGCGGCTTCAGCGGCAACCAAGAAGACTCAGA
AAGTCATGATCAAGAAGGCGAGATTTTTAGAAAGGCTGATGCCTCGGGAT
TACGATCGCGGGCAAGCATGAAGGGGAACTGTACTAAAAGCACCCGGTGA
ACTTGAAACTGACCCAGACTAAGTTAGTGCTAGCCCAACACCGTTTATGT
TTTTTGTGAAGGTGCGGCGGTACTACTACAGCAGTGAGCCAAGCGAAAAA
AAAAAGTGGCAACACGACATGATAGCACGGCCGCCATCAGAGCAGCCGCC
GCCAACTTTTACCGCAGCTGGCCCAGTGCCCGAAAACGTTCACACACCAT
CTCGTGGCACTTTCAGCTACGGTGGCTCCCACTGTGTACATGCACACAAA
GGATAAAGATACCACGTATGTGGTAAATGTAAAACGCCACAACCCCTCGA
TGATGTTCAAAACACTCCACAGGTGAAGCGGAGTGACAAGAAATTCCAGG
AGCTCGTGACTGAGATGACCATTGACCTGGTGGAGCAGGACATGGAGCGT
GAGGGTGTCAAGGCCAAGCAGAAGGCTGAAGATGAGCACAAGGCAAGAAC
ACATCCGGGGCGGAAGACCTGATCGAAGCACCACCAACAATGGAATTGCA
TGAAATCCTCGGAGTGGACAGGTCTGGATACGCAGTGTTTCTCCTGTTCA
TCTGGGAAGCACTTGAGGAGGCGGCTGATAGGAAGCACGTGGCGCTTCAA
GTATCCATGGTAGTTAAGGGATCACTCCGGTGAATTTTCAGCAGATTTCT
TGATCTTTCCCCATGGCATTCGTTTGGTGAACCCAATTTCGTATCGTGCC
TCACCGATGCCATGCACTCCTGAGTTTATTTTTCCCTGTCTTCGTCGACA
CCACAGCATCTTGCACCAATTTCACCCATCCGAAATGGCAAAAGGGGGAA
GGATTGGTATCAGTAAGAAAAAAGACTTGTGTGAAATACATGCGCTCAGT
GCACTAGGCCCCGGCTCACGGTAGACCTCCTTGTTAGGAGCGCGATAACA
TGCCCGGAAATCCCCAACCATTACCCCCTCTCAGGTCCTGAGGCGCATAA
TGGCCATGTGGGTTGGCCTGGGGATGCGCGACGTGTTCTCTGACTGGAAA
ACTTGGACAAAGAGGCGAATCCGCCAGAGAAGGAAGGACGCGAGGCAGGC
GAGGGTGACTGTAGTCAATCCCTAGGGCTACTCATCTCACGCCGAAAGCC
TCTCTATTGCCTAAGCATGACTATCAGGCCGGCCACAGGGCACAGGCCTA
ACCTCCGCTGCTCCTACAAGCGTGGTGACCTCCGGCATGAACGCACCCAC
CCGTGTAGAACCAAGCCCAAGCCTGGGTCTCCGAACTCCTATGCAGGATG
AGTAACCTGGAGTAGAGCCGGTGCTGGTACTTGGATCAGTAGAGCCGGTG
CGGGAAGGATTAATCGGCGGTTTACGTGGTACATCAGGCGACAAGCCGTT
AGGCAAAGCAACCGCCACTCTTGCTCTTGTTTTTGTGCAGGCCCTGCGTC
AGGCTTGGCATCAGTACGAGGCAGACAAGGTGGTGGTGGTGATGGCAGAG
TGGAAGCTGAGCTTCTGGGAGGAGCACTGGGATGAGTACAACGACTGCCA
GTACTGGACACACAGGTAAAGGTCGAGGGAGGCGCAGCCCTTGCAAGACC
TTATGTTTTGCCTGGTGCATTTGCTCTAGGGCAAAGGCTTCCCATCCTCT
TTTGCCCCATCGATACTTCATGTTTGTTACTGTTATATAGGGTTAGGGTT
AGGGTTAGGCTAAGCGGCTATTCGGGGTTGAGTCCACCGGCTGGGTCAGG
CCTGCTTCAAATGAAGATGAATGGCACGCGAGAGCGGTAGAAGAAGCCAG
GGAATTCGTACCACACTGGCAAAAGGAGGAAACTGTTATCGCCAATGCTC
GTCATGCCGGCTTTTTTTTTTTTGCGAAACTTCGTTACGGCTCTTGGAAT
TTTCCTGATTTAGTTTCCGTTCCTTGGTCGATATTTCGCCGAGAGACCTT
CTGTTTTTGGCGGAATTTTTACTGCCCTGGCTGGCGAGTTTGTGGACTTG
CCGGCCTTTTTCTTTCACTCTTTCATCTTGAGGATTTTTTTTTTGTTCTT
TCTTTCTCTGGGTTGAGATCCATTTTTTCTTGTCTTGTCTGAGATTTTCT
TTCTCTTGGTTCCTTTCTCGTTTTCTCATCCTTTGATAGTGGGCCTAGCG
TGGTCGTGATGTGTAAAAACAAGAAATGACACAAGTAACACTGCGTGAAA
AATAATCAAACAAGGAGAGTATGATAGTTTCCGTGCAGAGGGAAGAGAAA
GTGGTGGGGTGTTCAACTGGGATTACCCCAACTGATCTTGCATCTCATAT
TTCATGCTTGGTGTGGGCTGCATCTGAGCAACCTTCAAACACAGACTGGA
ATCCAGTCCAGTCTTGGACACCCCGCCACAGGATCTTCCAGGCGATTTCC
TTGTGAGGTGCAACCACACAAGGCTCGAAAGTTGGATTAAAATCCAGATA
AACCGAATATTCTGAGCTGGCTTAGGATTGCTCTCCCTGAAGGGGAATCT
GTATATCAACATAGCTCTTCACATGCTACATACACCTGAGCGCTTCTTTC
TTGCCCAAAATATCGATCCATGGTTGAGGTTGAGGATCAAACCGCTGAGT
CAGCCTCCCATAACCCTAACGCTAACCCGGCCTGCACACGCTGTGTACTC
TTGCCACTACTACCAACATGTTCAGGGACTCAGGAGAGATCCGATATGGC
GAAGTACCGAGCTTGGTCGAATACATCCCGGAGGGCTACAAGGCAGGTCA
CAGTTTATAA
back to top

Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1052:12998..24357-

>mRNA_D-mesarthrocarpus_Contig1052.3.10 ID=mRNA_D-mesarthrocarpus_Contig1052.3.10|Name=mRNA_D-mesarthrocarpus_Contig1052.3.10|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=2211bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1052:12998..24357- (Discosporangium mesarthrocarpum MT17_79)
AAGTTGGTCTCCCTTCGCCTGGTTGGCCTCGGGCTGACAGAGGTGCCCAG
CAACATCGGGGCCCACCTGTGGTCCCTCCACACGGTTTCGTTCGCGAGCA
ACCAGCTCACTGAGCTCCCTGATAGTCTGTGTGATCTCACGGCCTTGAAG
GAGCTGAACCTGCAGAGGAACAAGCTAAGGGCCCTCCCCGACAGGTTTGG
CAACCTCCTGAAGCTGGATGAAATCTATCTTACCAGCAACAGGCTCGAGT
CTTTGCCGCCTTCCTTTGGCAACCTTACTCGACTGAGAAGACTGGTGCTG
GACTGCAACCGCCTGCGAAGATTGCCGGAGACCCTTGGGAGGATGATGTG
CTCTACTCTCAGCATCAGTTCCAACCGCCTGGTCGGACTCCCCCACTGCA
TCAAGGACATGCAACACCTCAAGGTGCTGTCTGCAAATGACAACGGCCTT
CACTCACTTCCGTCAGACATTGGCAAATCCAAATCGATCACAGAAATCCA
TCTCTGCTCCAATCGGCTGAACCAGCTGCCAGATAGCATCTGCCAGTTGG
GGACCCTCCAAATGCTCTGGCTCGACCATAACTGCATTTCCGCATTACCC
ATGAACTTTCACAAACTGAGGGGGTTGCAGAGGCTACTGCTGGAGGGTAA
CAAGATGGTGTACCCCCCGGTGGAAGTGGTGTTAGGAGGGTGCAAAGCGG
TGAGGGTGTGGTGCAGCCGCCGCTTGGAAGACAGGATAGAGGCAAGAAAG
CACACTATTGTGATGACATTCCAGGACCTACTTAAGCAGGTGCACAGGAA
TAGAGGCCTCGCAAACCCGGCCTTCTTTGAGGGGGATGTGCAGATTGGCT
CCAACAAATACGACCACTACTATGCTCTCGTCTACGACAAGTTCTGGGAT
GAAATGCTTCCGGCCCTGGAGAAGGCAAGCAGAGCTAGAGGCACAACTGA
ATGGGCGGAGGACATATCTGGGCCTCGAGGAAGAGGTACATCGTTTGACT
ACACAAGGGAGGAGGTAGACAGAGTTCTGAGGGAGTACCGGGACCCAGCA
GGAAGGGTTATGCGTACACAGATGCAAACATTCAGAAGGTGCGGCTGCAT
TGATGCCCAGGGCAGAAGGAGAGTTTGTGTGCCTCCTAAGGTTGGGTGGA
TGTGCGAACGCAAAGCCACTCTGATAAAGCATGACATCATCTTGGAGCGG
GAGCAAGCGGAGAGGCAGAAGCAGGTTGCGGAACAAGAAGATATTGACTT
CCGCATCCAGCTGGCCAAGAAAATCGTCAAGGAGCATGCAGAAACACCAG
AGGGCAAGATCGAGTACGCAAGAAAAGCCATCAAAATTGCGGAGGAACTG
ACTCGACAGAAAGAGGCAAGTTCAACTAGACACATCATCAATTGGCGTCT
GGGGGAATTCGCCAGTGAGGCAGATGCACTGGTGTCACACCGGAAGGAAG
TACTGAAGAAAAAGTTTGCCAGTACCCGAGAAGGTATTGTCAAGGAGAGG
GAACATCGAGTCAACGATATACAGGCCAAGATTTCATCGCTGAAGGAGGA
GGCTGAGAAGCTCCGAGGTTGGGGCAGGGACCAGAAAGAGGCGGAGATTG
ACAAGGCGGTCAAGTCGCTTCAGGCGCTTCCCGAGGACAAGAAGCTTGAG
GAGGTTGACCAGCAGCTACAAGAGGAATTAAGGAAGCTGGATGAAAACGT
AAGCTTGCTGTGTGCGGGTCTCCAAGAGGGTCTTGGAGGAGTTTTGAATA
CAGTGAAGCGGAGTGACAAGAAATTCCAGGAGCTCGTGACTGAGATGACC
ATTGACCTGGTGGAGCAGGACATGGAGCGTGAGGGTGAGGCGGCTGATAG
GAAGCACGTGGCGCTTCAAGTATCCATGGTAGTCCTGAGGCGCATAATGG
CCATGTGGGTTGGCCTGGGGATGCGCGACGTGTTCTCTGACTGGAAAACT
TGGACAAAGAGGCGAATCCGCCAGAGAAGGAAGGACGCGAGGCAGGCGAG
GGCCCTGCGTCAGGCTTGGCATCAGTACGAGGCAGACAAGGTGGTGGTGG
TGATGGCAGAGTGGAAGCTGAGCTTCTGGGAGGAGCACTGGGATGAGTAC
AACGACTGCCAGTACTGGACACACAGGGACTCAGGAGAGATCCGATATGG
CGAAGTACCGAGCTTGGTCGAATACATCCCGGAGGGCTACAAGGCAGGTC
ACAGTTTATAA
back to top