mRNA_D-mesarthrocarpus_Contig10515.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10515.1.1 vs. uniprot
Match: A0A6H5L5E9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5E9_9PHAE) HSP 1 Score: 117 bits (294), Expect = 1.410e-31 Identity = 53/64 (82.81%), Postives = 61/64 (95.31%), Query Frame = 1
Query: 1 QLDLNKVPQNIVSWPTEPILRPTRAVVPPAFGVDISPIVWVMICSFLHEILLGQQGILNLISSK 192
+LDLN PQN+V+WPTEPILRPTRA++PPAFGVDISPIVWVMICS +HEILLGQQGILNL+S+K
Sbjct: 158 KLDLNSAPQNLVAWPTEPILRPTRAIIPPAFGVDISPIVWVMICSLVHEILLGQQGILNLMSNK 221
BLAST of mRNA_D-mesarthrocarpus_Contig10515.1.1 vs. uniprot
Match: D8LHQ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ4_ECTSI) HSP 1 Score: 116 bits (291), Expect = 4.860e-31 Identity = 52/64 (81.25%), Postives = 61/64 (95.31%), Query Frame = 1
Query: 1 QLDLNKVPQNIVSWPTEPILRPTRAVVPPAFGVDISPIVWVMICSFLHEILLGQQGILNLISSK 192
+LDLN PQN+V+WPTEPIL+PTRA++PPAFGVDISPIVWVMICS +HEILLGQQGILNL+S+K
Sbjct: 166 KLDLNSAPQNLVAWPTEPILKPTRAIIPPAFGVDISPIVWVMICSLVHEILLGQQGILNLMSNK 229
BLAST of mRNA_D-mesarthrocarpus_Contig10515.1.1 vs. uniprot
Match: A0A836CA21_9STRA (YGGT family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA21_9STRA) HSP 1 Score: 108 bits (271), Expect = 1.880e-28 Identity = 50/64 (78.12%), Postives = 57/64 (89.06%), Query Frame = 1
Query: 1 QLDLNKVPQNIVSWPTEPILRPTRAVVPPAFGVDISPIVWVMICSFLHEILLGQQGILNLISSK 192
Q DLNK PQN+V+WPTEPIL+PTRAVVPPAFGVDISPIVWVMI SF+ EIL GQQGI N++S +
Sbjct: 126 QTDLNKAPQNLVAWPTEPILKPTRAVVPPAFGVDISPIVWVMILSFVREILFGQQGIFNMLSQQ 189
BLAST of mRNA_D-mesarthrocarpus_Contig10515.1.1 vs. uniprot
Match: A0A7S2GHS6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GHS6_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 2.180e-23 Identity = 40/61 (65.57%), Postives = 51/61 (83.61%), Query Frame = 1
Query: 1 QLDLNKVPQNIVSWPTEPILRPTRAVVPPAFGVDISPIVWVMICSFLHEILLGQQGILNLI 183
+++LNK+P NI++WPTEP LRPTR V+PPAFGVDISPIVW+ I SF EI GQQG+ N++
Sbjct: 110 EINLNKLPYNIITWPTEPFLRPTRKVIPPAFGVDISPIVWIAILSFFREIFFGQQGVFNML 170
BLAST of mRNA_D-mesarthrocarpus_Contig10515.1.1 vs. uniprot
Match: UPI0016891C49 (YggT family protein n=1 Tax=Microcoleus sp. FACHB-831 TaxID=2692827 RepID=UPI0016891C49) HSP 1 Score: 91.7 bits (226), Expect = 9.880e-23 Identity = 40/64 (62.50%), Postives = 53/64 (82.81%), Query Frame = 1
Query: 1 QLDLNKVPQNIVSWPTEPILRPTRAVVPPAFGVDISPIVWVMICSFLHEILLGQQGILNLISSK 192
Q+DLN+ P N+++WPTEP L PTR ++PP GVDISPIVWV ICS + EILLGQQG+L +++S+
Sbjct: 33 QVDLNRFPFNLIAWPTEPFLIPTRKLIPPLGGVDISPIVWVGICSLIREILLGQQGLLTMMASR 96
BLAST of mRNA_D-mesarthrocarpus_Contig10515.1.1 vs. uniprot
Match: A0A846F7I1_9CYAN (YggT family protein n=1 Tax=Cyanothece sp. SIO1E1 TaxID=2607788 RepID=A0A846F7I1_9CYAN) HSP 1 Score: 90.1 bits (222), Expect = 4.020e-22 Identity = 41/62 (66.13%), Postives = 52/62 (83.87%), Query Frame = 1
Query: 1 QLDLNKVPQNIVSWPTEPILRPTRAVVPPAFGVDISPIVWVMICSFLHEILLGQQGILNLIS 186
Q+DLN++P N+V+WPTEP+L PTR +VPP GVDI+PI+WV I S L EILLGQQG+L +IS
Sbjct: 33 QVDLNQLPYNLVAWPTEPLLIPTRKLVPPIGGVDIAPIIWVAILSLLREILLGQQGLLTMIS 94
BLAST of mRNA_D-mesarthrocarpus_Contig10515.1.1 vs. uniprot
Match: A0A7S2PCB6_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PCB6_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 5.470e-22 Identity = 42/60 (70.00%), Postives = 51/60 (85.00%), Query Frame = 1
Query: 1 QLDLNKVPQNIVSWPTEPILRPTRAVVPPAFGVDISPIVWVMICSFLHEILLGQQGILNL 180
+ ++N+VP NIV WPTEP+LR TR VVPPAFGVDISPIVW+ + +FLHEI LGQQG+L L
Sbjct: 109 ETNVNEVPYNIVVWPTEPLLRVTRGVVPPAFGVDISPIVWLGVFTFLHEIFLGQQGLLTL 168
BLAST of mRNA_D-mesarthrocarpus_Contig10515.1.1 vs. uniprot
Match: F0XY49_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XY49_AURAN) HSP 1 Score: 89.4 bits (220), Expect = 6.320e-22 Identity = 39/64 (60.94%), Postives = 52/64 (81.25%), Query Frame = 1
Query: 1 QLDLNKVPQNIVSWPTEPILRPTRAVVPPAFGVDISPIVWVMICSFLHEILLGQQGILNLISSK 192
+ DLN +P IV+WPTEP+L+ TRAVVPP+FGVD+SPIVW+ + SF E+LLGQQG+L L+ +
Sbjct: 24 ETDLNDMPWRIVTWPTEPVLKLTRAVVPPSFGVDVSPIVWIAVASFSRELLLGQQGVLILMMQR 87
BLAST of mRNA_D-mesarthrocarpus_Contig10515.1.1 vs. uniprot
Match: UPI0016866C19 (YggT family protein n=1 Tax=Microcoleus sp. FACHB-1515 TaxID=2692821 RepID=UPI0016866C19) HSP 1 Score: 88.6 bits (218), Expect = 1.630e-21 Identity = 39/62 (62.90%), Postives = 51/62 (82.26%), Query Frame = 1
Query: 1 QLDLNKVPQNIVSWPTEPILRPTRAVVPPAFGVDISPIVWVMICSFLHEILLGQQGILNLIS 186
Q+DLNK+P N+++WPTEP LRP R +VPP GVDISPIVW+ I S + E+LLGQQG+L ++S
Sbjct: 32 QIDLNKLPYNLIAWPTEPFLRPMRKLVPPLGGVDISPIVWIGIFSLVRELLLGQQGLLTMMS 93
BLAST of mRNA_D-mesarthrocarpus_Contig10515.1.1 vs. uniprot
Match: A0A651EN12_9CYAN (YggT family protein n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A651EN12_9CYAN) HSP 1 Score: 88.6 bits (218), Expect = 1.720e-21 Identity = 40/63 (63.49%), Postives = 50/63 (79.37%), Query Frame = 1
Query: 1 QLDLNKVPQNIVSWPTEPILRPTRAVVPPAFGVDISPIVWVMICSFLHEILLGQQGILNLISS 189
Q DLN +P NIV+WPTEP LRPTR ++PP GVD+SPI+WV I S L EILLGQQG++ + S+
Sbjct: 33 QADLNSLPLNIVAWPTEPFLRPTRKLIPPLGGVDVSPIIWVGIASLLREILLGQQGLITIWSN 95 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10515.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10515.1.1 >prot_D-mesarthrocarpus_Contig10515.1.1 ID=prot_D-mesarthrocarpus_Contig10515.1.1|Name=mRNA_D-mesarthrocarpus_Contig10515.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=65bp QLDLNKVPQNIVSWPTEPILRPTRAVVPPAFGVDISPIVWVMICSFLHEIback to top mRNA from alignment at D-mesarthrocarpus_Contig10515:2391..2585+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10515.1.1 ID=mRNA_D-mesarthrocarpus_Contig10515.1.1|Name=mRNA_D-mesarthrocarpus_Contig10515.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=195bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10515:2391..2585+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10515:2391..2585+ >mRNA_D-mesarthrocarpus_Contig10515.1.1 ID=mRNA_D-mesarthrocarpus_Contig10515.1.1|Name=mRNA_D-mesarthrocarpus_Contig10515.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=195bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10515:2391..2585+ (Discosporangium mesarthrocarpum MT17_79)back to top |