mRNA_D-mesarthrocarpus_Contig10510.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10510.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10510.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig10510.1.1 vs. uniprot
Match: D7G3K5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3K5_ECTSI)

HSP 1 Score: 119 bits (299), Expect = 4.170e-27
Identity = 57/75 (76.00%), Postives = 65/75 (86.67%), Query Frame = 2 
Query:  221 QTEPDNFPRLVELMQDMQEHGQVPSEIIKDLAPGLEFNAEGMPVMPNMGEGMLPNLPGMPPGGLGGVDPQNCCVS 445
            +TEPDNFPRL+ELMQDMQEHGQVP+EIIK+LAPGLEFNAEG P+MPN+GEGM+PNLPG P G       +NCCVS
Sbjct:  289 ETEPDNFPRLMELMQDMQEHGQVPAEIIKELAPGLEFNAEGAPIMPNVGEGMMPNLPGFPMG----EGAENCCVS 359
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BLAST of mRNA_D-mesarthrocarpus_Contig10510.1.1 vs. uniprot
Match: A0A6G0R2E4_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6G0R2E4_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 1.570e-19
Identity = 50/80 (62.50%), Postives = 59/80 (73.75%), Query Frame = 2 
Query:  200 LIPTFEAQTEPDNFPRLVELMQDMQEHGQVPSEIIKDLAPGLEFNAEGMPVMPNMGEGMLPNLPGMPPGGLGGVDPQNCC 439
            ++  +EA  EPDNF RL ELMQ+MQE GQ PSEI+KDLAPGL+F+ EGMP+MPNMG GM P + GMP   LGG   Q  C
Sbjct:  224 IVAVYEA--EPDNFTRLSELMQEMQETGQPPSEIVKDLAPGLQFDDEGMPIMPNMGAGMFPGMAGMPGMPLGGTPGQEQC 301
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BLAST of mRNA_D-mesarthrocarpus_Contig10510.1.1 vs. uniprot
Match: A0A7S1XKR9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XKR9_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 1.060e-18
Identity = 49/81 (60.49%), Postives = 61/81 (75.31%), Query Frame = 2 
Query:  200 LIPTFEAQTEPDNFPRLVELMQDMQEHGQVPSEIIKDLAPGLEFNAEGMPVMPNMGEGMLPNLPGMPPGGLGGVDPQNCCV 442
            L+ T+E  TEPDNFPRL+ELMQD+QE GQ P+EIIK+LAPGLEFN +GMP+MPN+G  ++P +PG  P      D Q C V
Sbjct:  231 LVATYE--TEPDNFPRLMELMQDVQEFGQPPAEIIKELAPGLEFNEDGMPIMPNVGPNVMPFIPGAMP------DQQPCSV 303
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BLAST of mRNA_D-mesarthrocarpus_Contig10510.1.1 vs. uniprot
Match: H3GM11_PHYRM (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=H3GM11_PHYRM)

HSP 1 Score: 95.5 bits (236), Expect = 1.460e-18
Identity = 47/73 (64.38%), Postives = 56/73 (76.71%), Query Frame = 2 
Query:  221 QTEPDNFPRLVELMQDMQEHGQVPSEIIKDLAPGLEFNAEGMPVMPNMGEGMLPNLPGMPPGGLGGVDPQNCC 439
            ++EPDN+ RL ELMQ+MQE GQ PSEI+KDLAPGL+F+ EGMP+MPNMG GM P + GMP   LGG   Q  C
Sbjct:  251 ESEPDNYARLSELMQEMQETGQPPSEIVKDLAPGLQFDDEGMPIMPNMGAGMFPGMAGMPGMPLGGGPGQEQC 323
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BLAST of mRNA_D-mesarthrocarpus_Contig10510.1.1 vs. uniprot
Match: A0A8K1CJW8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJW8_PYTOL)

HSP 1 Score: 94.7 bits (234), Expect = 2.450e-18
Identity = 47/74 (63.51%), Postives = 56/74 (75.68%), Query Frame = 2 
Query:  221 QTEPDNFPRLVELMQDMQEHGQVPSEIIKDLAPGLEFNAEGMPVMPNMGEGMLPNLPGMPPGGLGGVDPQNCCV 442
            ++EPDNF RL ELMQ+MQE GQ PSEI+K+LAPGL+F+ EGMPVMPNMG GM P + GMP   +GG   Q  C 
Sbjct:  243 ESEPDNFARLSELMQEMQETGQPPSEIVKELAPGLQFDDEGMPVMPNMGAGMFPGMAGMPGFPMGGGAGQEQCT 316
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BLAST of mRNA_D-mesarthrocarpus_Contig10510.1.1 vs. uniprot
Match: A0A482SN89_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SN89_9ARCH)

HSP 1 Score: 90.1 bits (222), Expect = 7.870e-18
Identity = 40/57 (70.18%), Postives = 51/57 (89.47%), Query Frame = 2 
Query:  224 TEPDNFPRLVELMQDMQEHGQVPSEIIKDLAPGLEFNAEGMPVMPNMGEGMLPNLPG 394
            TEPDNFPRL+ELM D+Q++GQ P+EIIK LAPGL+F+  GMP+MPNMG GM+P++PG
Sbjct:  100 TEPDNFPRLMELMFDLQQYGQPPAEIIKGLAPGLKFDENGMPIMPNMGAGMMPSMPG 156
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BLAST of mRNA_D-mesarthrocarpus_Contig10510.1.1 vs. uniprot
Match: A0A8J5IXJ4_9STRA (Transmembrane protein 231 n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IXJ4_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 9.790e-18
Identity = 45/68 (66.18%), Postives = 55/68 (80.88%), Query Frame = 2 
Query:  221 QTEPDNFPRLVELMQDMQEHGQVPSEIIKDLAPGLEFNAEGMPVMPNMGEGMLPNLPGMPPGGLGGVD 424
            ++EPDN+ RL ELMQ+MQE GQ PSEI+KDLAPGL+F+ EGMP+MPNMG GM P + GMP GG  G +
Sbjct:  481 ESEPDNYTRLSELMQEMQETGQPPSEIVKDLAPGLQFDDEGMPIMPNMGPGMFPGMAGMPLGGAPGQE 548
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BLAST of mRNA_D-mesarthrocarpus_Contig10510.1.1 vs. uniprot
Match: A0A1V9Z107_9STRA (Uncharacterized protein n=2 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9Z107_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 1.490e-17
Identity = 43/73 (58.90%), Postives = 57/73 (78.08%), Query Frame = 2 
Query:  221 QTEPDNFPRLVELMQDMQEHGQVPSEIIKDLAPGLEFNAEGMPVMPNMGEGMLPNLPGMPPGGLGGVDPQNCC 439
            +TEPDN+ RL ELMQ+MQE GQ PSEI+K+LAPGL+F+ +GMP+MPNMG GM P + G+P   + G+  Q+ C
Sbjct:  216 ETEPDNYARLSELMQEMQECGQPPSEIVKELAPGLQFDDDGMPIMPNMGPGMFPGMAGLPGAPMPGMPGQDQC 288
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BLAST of mRNA_D-mesarthrocarpus_Contig10510.1.1 vs. uniprot
Match: A0A5D6XZC9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZC9_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 1.620e-17
Identity = 46/69 (66.67%), Postives = 55/69 (79.71%), Query Frame = 2 
Query:  221 QTEPDNFPRLVELMQDMQEHGQVPSEIIKDLAPGLEFNAEGMPVMPNMGEGMLPNL---PGMPPGGLGG 418
            ++EPDN+ RL ELMQ+MQE GQ PSEI+KDLAPGL+F+ EGMPVMPNMG GM P +   PGMP  G+ G
Sbjct:  243 ESEPDNYARLSELMQEMQETGQPPSEIVKDLAPGLQFDDEGMPVMPNMGPGMFPGMAGMPGMPTNGIPG 311
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BLAST of mRNA_D-mesarthrocarpus_Contig10510.1.1 vs. uniprot
Match: W4GV00_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GV00_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 2.080e-17
Identity = 47/77 (61.04%), Postives = 56/77 (72.73%), Query Frame = 2 
Query:  221 QTEPDNFPRLVELMQDMQEHGQVPSEIIKDLAPGLEFNAEGMPVMPNMGEGMLPN---LPGMPPGGLGGVDPQNCCV 442
            + EPDN+ RL ELMQ+MQE GQ PSEI+K+LAPGL+F+ EGMP+MPNMG G  P    LPG P  G+ G D   CCV
Sbjct:  217 ENEPDNYARLSELMQEMQECGQPPSEIVKELAPGLQFDDEGMPIMPNMGPGAFPGMAGLPGAPLAGMPGAD--QCCV 291
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10510.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3K5_ECTSI4.170e-2776.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6G0R2E4_9STRA1.570e-1962.50Uncharacterized protein n=5 Tax=Phytophthora TaxID... [more]
A0A7S1XKR9_9STRA1.060e-1860.49Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
H3GM11_PHYRM1.460e-1864.38Uncharacterized protein n=9 Tax=Phytophthora TaxID... [more]
A0A8K1CJW8_PYTOL2.450e-1863.51Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A482SN89_9ARCH7.870e-1870.18Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A8J5IXJ4_9STRA9.790e-1866.18Transmembrane protein 231 n=1 Tax=Phytophthora ale... [more]
A0A1V9Z107_9STRA1.490e-1758.90Uncharacterized protein n=2 Tax=Saprolegniaceae Ta... [more]
A0A5D6XZC9_9STRA1.620e-1766.67Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
W4GV00_9STRA2.080e-1761.04Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10510contigD-mesarthrocarpus_Contig10510:24..1114 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G3K5
Preferred namePEX19
PFAMsPex19
Model size1091
Max annot lvl2759|Eukaryota
KEGG koko:K11804,ko:K13337,ko:K21398
KEGG TC2.A.55.2.1,2.A.55.2.2,3.A.20.1,9.A.17.1
KEGG Pathwayko04142,ko04146,ko04216,ko04978,map04142,map04146,map04216,map04978
Hectar predicted targeting categoryother localisation
GOsGO:0000151,GO:0000268,GO:0002119,GO:0002164,GO:0003674,GO:0005048,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005777,GO:0005778,GO:0005829,GO:0005886,GO:0005903,GO:0006457,GO:0006464,GO:0006605,GO:0006612,GO:0006625,GO:0006807,GO:0006810,GO:0006886,GO:0006996,GO:0007031,GO:0007275,GO:0007399,GO:0008104,GO:0008150,GO:0008152,GO:0009791,GO:0009987,GO:0015031,GO:0015833,GO:0015919,GO:0016020,GO:0016021,GO:0016043,GO:0016557,GO:0016559,GO:0017038,GO:0019538,GO:0019899,GO:0031090,GO:0031224,GO:0031253,GO:0031461,GO:0031526,GO:0031647,GO:0031903,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033218,GO:0033328,GO:0033365,GO:0034613,GO:0036105,GO:0036211,GO:0042277,GO:0042579,GO:0042802,GO:0042886,GO:0042995,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043574,GO:0043687,GO:0044085,GO:0044091,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0045046,GO:0045184,GO:0046907,GO:0047485,GO:0048285,GO:0048731,GO:0048856,GO:0050821,GO:0051098,GO:0051100,GO:0051117,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061077,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072321,GO:0072594,GO:0072657,GO:0072662,GO:0072663,GO:0080008,GO:0090150,GO:0098588,GO:0098590,GO:0098805,GO:0098862,GO:0120025,GO:0120038,GO:1900130,GO:1900131,GO:1901564,GO:1902494,GO:1990234
Exons1
Evalue3.69e-23
EggNOG OGsKOG3133@1|root,KOG3133@2759|Eukaryota
Descriptionperoxisome membrane targeting sequence binding
Cds size189
COG categoryS
BRITEko00000,ko00001,ko02000,ko04121
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789188.0190346-UTR-D-mesarthrocarpus_Contig10510:23..2821680789188.0190346-UTR-D-mesarthrocarpus_Contig10510:23..282Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10510 24..282 +
1680789188.0453684-UTR-D-mesarthrocarpus_Contig10510:471..11141680789188.0453684-UTR-D-mesarthrocarpus_Contig10510:471..1114Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10510 472..1114 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789188.0310016-CDS-D-mesarthrocarpus_Contig10510:282..4711680789188.0310016-CDS-D-mesarthrocarpus_Contig10510:282..471Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10510 283..471 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10510.1.1prot_D-mesarthrocarpus_Contig10510.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10510 283..471 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10510.1.1

>prot_D-mesarthrocarpus_Contig10510.1.1 ID=prot_D-mesarthrocarpus_Contig10510.1.1|Name=mRNA_D-mesarthrocarpus_Contig10510.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=63bp
MQDMQEHGQVPSEIIKDLAPGLEFNAEGMPVMPNMGEGMLPNLPGMPPGG
LGGVDPQNCCVS*
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mRNA from alignment at D-mesarthrocarpus_Contig10510:24..1114+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10510.1.1 ID=mRNA_D-mesarthrocarpus_Contig10510.1.1|Name=mRNA_D-mesarthrocarpus_Contig10510.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1091bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10510:24..1114+ (Discosporangium mesarthrocarpum MT17_79)
CCGGCGGCGGTCATGATGATCGTGAGATACCCCCCCCCTAAACACGCCTG
CCTCCCTCTCCAGGGCCAGCCAGGTCGCTGGCCGCTGCTATTTTTTTTTC
ATTTTGTTCTGAGAGCCACCTTCTCAAGATCCACATACCTGCCCAAGAGC
AAACAACCGCTTGACCTCCATCAACCTAACCCTAACCCTAACCCTCACCC
TGATCCCAACTTTTGAAGCACAGACGGAGCCGGACAACTTCCCCAGGCTG
GTGGAGCTCATGCAGGACATGCAGGAGCATGGGCAGGTGCCCTCGGAGAT
CATAAAAGACCTGGCTCCTGGGCTGGAGTTCAATGCGGAGGGCATGCCTG
TCATGCCCAACATGGGGGAGGGCATGCTGCCGAACTTGCCGGGGATGCCG
CCGGGGGGGCTGGGGGGGGTGGACCCGCAGAACTGTTGTGTCTCTTGATC
TACGAAGTATGCGTCATGAGGCAGTGCTGCTGCCGCTCCTTCCTTCTGGC
AGCTCTCACTTTTTTTTTTTGCAAGGACGTACGTGCGAGGCATTTCTTTT
TGAAACACCTCCGTTCAGTATGAGTTGTCACCGTTGGTTGTTTGAAGTAT
TGTAGCATGAAAACGGTGACAATCAATACTGAATGACGGGAGAAGCGTTT
CTTTTTTCCCCTGGACAAAAGACCCTGCAATAAGAATACCAGGTATTAAA
CATGTACGTACGTACCCACTTTGTAGTACCTATTGTAAGGTACCCAGCAC
CAAGTACTAAATTGCACTTGGTAAGAAAGAGAAGTAGCCCACACTGTGTG
TGTTGCACTGCTGAGCGGGTAGGTGCTGATCCTGGAAGTGCCATTCTCTG
CTTGGACCTGTCTACTGTGAGGGTGGTGGAACTCACCAAGGCACAGCCAG
GAATCCACTGCCTCTAATGCTCTCTTCCGAGCCCTGTAAAAATCAGATTG
CTTGGCGTGGTCATGGCCAGGGATGTGTGGAAGCACCAGGCACTGCAGCC
AAGTAGTAGTATACTTCAAAGTATGTTGGTAGGAGAGTACTTCAAAACAT
GTTACTAGTAGTAGTATGTTTCAAAGCGTGTAGTTGTATGC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10510:24..1114+

>mRNA_D-mesarthrocarpus_Contig10510.1.1 ID=mRNA_D-mesarthrocarpus_Contig10510.1.1|Name=mRNA_D-mesarthrocarpus_Contig10510.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=189bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10510:24..1114+ (Discosporangium mesarthrocarpum MT17_79)
ATGCAGGACATGCAGGAGCATGGGCAGGTGCCCTCGGAGATCATAAAAGA
CCTGGCTCCTGGGCTGGAGTTCAATGCGGAGGGCATGCCTGTCATGCCCA
ACATGGGGGAGGGCATGCTGCCGAACTTGCCGGGGATGCCGCCGGGGGGG
CTGGGGGGGGTGGACCCGCAGAACTGTTGTGTCTCTTGA
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