mRNA_D-mesarthrocarpus_Contig10509.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10509.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10509.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10509.1.1 vs. uniprot
Match: A0A6H5JJJ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ5_9PHAE)

HSP 1 Score: 174 bits (441), Expect = 7.510e-52
Identity = 76/118 (64.41%), Postives = 92/118 (77.97%), Query Frame = 1
Query:   28 MGHDGVPSPPVWPEKFHALLIQNRTGNLAVVDLWYDFPGGRNLNIIQSQGGEEDGPLWDNERQNGSTYYYTPA---TRECNVIDMEVGLLRPDWLSGATYLGEERVGMYSCHKWEDGD 372
            +G +  PSPPVWP +FHA++ Q   G+  VVDLWYD+  GRNLNIIQ+Q GEEDGPL+DNER NG+TYYY PA   ++ CNVID  VG++RPDWL GATYLGEE  G+Y CHKWE G+
Sbjct:   23 IGANDAPSPPVWPGRFHAMMSQVINGDYGVVDLWYDYAAGRNLNIIQTQSGEEDGPLFDNERANGTTYYYHPAKAKSKYCNVIDFGVGIIRPDWLEGATYLGEEECGIYQCHKWEQGE 140          
BLAST of mRNA_D-mesarthrocarpus_Contig10509.1.1 vs. uniprot
Match: A0A7S2X8A1_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2X8A1_9EUKA)

HSP 1 Score: 163 bits (412), Expect = 2.930e-48
Identity = 72/140 (51.43%), Postives = 98/140 (70.00%), Query Frame = 1
Query:   43 VPSPPVWPEKFHALLIQNRTGNLAVVDLWYDFPGGRNLNIIQSQGGEEDGP---LWDNERQNGSTYYYTPATRECNVIDMEVGLLRPDWLSGATYLGEERVGMYSCHKWEDGD-FITYWNDKYTGRPVRWTFFDGADFHV 450
            VP+PPVWPEKFHA+LIQNR+ +LA+VDL+YD+  GRNLN+I+SQ  +++G    LWD E  N ++YYY P  + C  +   VG+LRP+WL  AT+L  E++ +Y C+ W   D FITYW D  T +PV+W F  G + HV
Sbjct:    7 VPTPPVWPEKFHAILIQNRSNDLAIVDLYYDYTKGRNLNLIRSQHDDDEGSKGELWDVEFDNKTSYYYYPRAKSCMPMQFPVGILRPNWLDNATFLRTEKIDLYDCNVWTKADGFITYWEDVNTHKPVKWIFGSGMEEHV 146          
BLAST of mRNA_D-mesarthrocarpus_Contig10509.1.1 vs. uniprot
Match: A0A7S3YC93_9EUKA (Hypothetical protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YC93_9EUKA)

HSP 1 Score: 163 bits (412), Expect = 4.600e-48
Identity = 74/140 (52.86%), Postives = 97/140 (69.29%), Query Frame = 1
Query:   43 VPSPPVWPEKFHALLIQNRTGNLAVVDLWYDFPGGRNLNIIQSQGGEED---GPLWDNERQNGSTYYYTPATRECNVIDMEVGLLRPDWLSGATYLGEERVGMYSCHKWEDGD-FITYWNDKYTGRPVRWTFFDGADFHV 450
             PSPPVWPEKFHA+LIQNR+ +LA+VDL+YD+  GRNLN+I+SQ  +++   G LWD E  N ++YYY P  + C  +   VG+LRP+WL  ATYL  E V +Y+C+ W   D FITYW D  T +PV+W F  G + HV
Sbjct:   21 APSPPVWPEKFHAILIQNRSNDLAIVDLYYDWTKGRNLNLIRSQHDDDENSKGELWDVEFNNKTSYYYYPRAKSCMPMQFPVGILRPNWLENATYLRTETVDLYNCNVWTKADGFITYWEDVNTHKPVKWIFGSGMEEHV 160          
BLAST of mRNA_D-mesarthrocarpus_Contig10509.1.1 vs. uniprot
Match: A0A2J6LKB5_LACSA (Uncharacterized protein n=3 Tax=Lactuca sativa TaxID=4236 RepID=A0A2J6LKB5_LACSA)

HSP 1 Score: 157 bits (396), Expect = 9.890e-46
Identity = 72/150 (48.00%), Postives = 99/150 (66.00%), Query Frame = 1
Query:    4 LSCLHPQGMGHDGVPSPPVWPEKFHALLIQNRTGNLAVVDLWYDFPGGRNLNIIQSQGGEEDGPLWDNERQNGSTYYYT-PATRECNVIDMEVGLLRPDWLSGATYLGEERVGMYSCHKWEDGDFITYWNDKYTGRPVRWTFFDGADFHV 450
            ++ L  +G G +  P P  WPE+FH+LL+ N TG L ++DLWYD+P GRN NIIQ Q G      +D E  NG++++YT  + REC+   +EVG+LRP+WL GATY+G+ +V  + C+ WE  DFITY+ D  T RPV W F+ G   HV
Sbjct:   23 IAALSTKGEGEE-PPKPTPWPEQFHSLLVMNYTGELQLIDLWYDWPNGRNFNIIQHQLGNIK---YDLEWNNGTSFFYTLDSNRECSSAQLEVGILRPNWLDGATYVGQRQVDGFLCYVWEKADFITYYEDVVTRRPVHWVFYTGRAAHV 168          
BLAST of mRNA_D-mesarthrocarpus_Contig10509.1.1 vs. uniprot
Match: A0A0G4HDP5_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HDP5_9ALVE)

HSP 1 Score: 158 bits (400), Expect = 1.040e-45
Identity = 69/135 (51.11%), Postives = 90/135 (66.67%), Query Frame = 1
Query:   46 PSPPVWPEKFHALLIQNRTGNLAVVDLWYDFPGGRNLNIIQSQGGEEDGPLWDNERQNGSTYYYTPATRECNVIDMEVGLLRPDWLSGATYLGEERVGMYSCHKWEDGDFITYWNDKYTGRPVRWTFFDGADFHV 450
            P  PVWP+ FHA L +NR  +LA++DL+YD+ GGRN NI++SQ G+  G L+D E  N +++Y+      C  I   VG+LRP+WL GA +LGEE V  + C KW   DFITYW DK +GRP+RW FFDG    V
Sbjct:   30 PPDPVWPDLFHASLFRNRNESLAMIDLYYDWKGGRNANIVKSQQGKT-GTLYDIEYNNQTSFYFNREKNTCKTITFSVGILRPNWLEGAEFLGEETVNTFECWKWTKADFITYWQDKKSGRPIRWRFFDGVQVEV 163          
BLAST of mRNA_D-mesarthrocarpus_Contig10509.1.1 vs. uniprot
Match: S8E8A6_9LAMI (Transferase, transferring glycosyl groups n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8E8A6_9LAMI)

HSP 1 Score: 156 bits (394), Expect = 2.830e-45
Identity = 69/136 (50.74%), Postives = 93/136 (68.38%), Query Frame = 1
Query:   46 PSPPVWPEKFHALLIQNRTGNLAVVDLWYDFPGGRNLNIIQSQGGEEDGPLWDNERQNGSTYYYT-PATRECNVIDMEVGLLRPDWLSGATYLGEERVGMYSCHKWEDGDFITYWNDKYTGRPVRWTFFDGADFHV 450
            P P +WP +FH++L  N +G+L+++DLWYD+P GRN NIIQSQ G     L+D E  NG+ + Y+  +TR+C  + +EVG+LRPDWL GA YLG E+V  + C+ WE  DFI Y+ D  TGRPV W F+ G   HV
Sbjct:   23 PVPAIWPHQFHSILYVNYSGSLSLIDLWYDWPNGRNFNIIQSQLGSV---LYDLEWNNGTQFVYSLDSTRKCRAVQLEVGILRPDWLDGAVYLGREKVDGFLCNVWEKVDFIWYYEDVVTGRPVHWVFYTGRSIHV 155          
BLAST of mRNA_D-mesarthrocarpus_Contig10509.1.1 vs. uniprot
Match: A0A6D2HF67_9BRAS (Uncharacterized protein n=4 Tax=Coluteocarpeae TaxID=1394505 RepID=A0A6D2HF67_9BRAS)

HSP 1 Score: 155 bits (391), Expect = 4.590e-45
Identity = 70/136 (51.47%), Postives = 93/136 (68.38%), Query Frame = 1
Query:   46 PSPPVWPEKFHALLIQNRTGNLAVVDLWYDFPGGRNLNIIQSQGGEEDGPLWDNERQNGSTYYYT-PATRECNVIDMEVGLLRPDWLSGATYLGEERVGMYSCHKWEDGDFITYWNDKYTGRPVRWTFFDGADFHV 450
            P P  WPE+FHALL+ N++G+L VVDLWYD+  GRN NIIQ Q GE     +D E  NG+++YYT  A++ C  +  EVG+LRP+WL GA YLG+ RV  + C+ WE  DF+ Y+ D  T RPV+W F+ G + HV
Sbjct:   33 PVPAAWPEQFHALLLMNKSGSLEVVDLWYDWINGRNFNIIQKQLGELS---YDLEWNNGTSFYYTLDASKSCRTVHFEVGILRPNWLDGANYLGQRRVNKFLCNVWEKVDFLWYYEDVITKRPVQWIFYTGREAHV 165          
BLAST of mRNA_D-mesarthrocarpus_Contig10509.1.1 vs. uniprot
Match: A0A4D6L967_VIGUN (Uncharacterized protein n=1 Tax=Vigna unguiculata TaxID=3917 RepID=A0A4D6L967_VIGUN)

HSP 1 Score: 155 bits (393), Expect = 5.830e-45
Identity = 70/141 (49.65%), Postives = 94/141 (66.67%), Query Frame = 1
Query:   34 HDGVPSPPVWPEKFHALLIQNRTGNLAVVDLWYDFPGGRNLNIIQSQGGEEDGPLWDNERQNGSTYYYT--PATRECNVIDMEVGLLRPDWLSGATYLGEERVGMYSCHKWEDGDFITYWNDKYTGRPVRWTFFDGADFHV 450
            +D +P P  WP++FH++L  NR+GNL   DLWYD+P GRN NI+Q+Q G      +D E  NG+++YYT  P  + C ++  +VG+LRP WL GA YLG+E V  + C+ WE  DFITY+ D  T RPV+W FFDG   HV
Sbjct:   26 NDSIPVPADWPQQFHSVLFINRSGNLRKTDLWYDWPNGRNFNIVQNQLGVL---TYDLEWDNGTSFYYTLQPFDKTCKIMHFDVGILRPSWLDGANYLGQESVDNFLCNVWEKVDFITYYEDVLTRRPVKWIFFDGMVSHV 163          
BLAST of mRNA_D-mesarthrocarpus_Contig10509.1.1 vs. uniprot
Match: A0A2T7BY90_9POAL (Uncharacterized protein n=3 Tax=Panicum TaxID=4539 RepID=A0A2T7BY90_9POAL)

HSP 1 Score: 155 bits (391), Expect = 6.940e-45
Identity = 73/153 (47.71%), Postives = 96/153 (62.75%), Query Frame = 1
Query:    1 LLSCLH--PQGMGHDGVPSPPVWPEKFHALLIQNRTGNLAVVDLWYDFPGGRNLNIIQSQGGEEDGPLWDNERQNGSTYYYTPATRECNVIDMEVGLLRPDWLS-GATYLGEERVGMYSCHKWEDGDFITYWNDKYTGRPVRWTFFDGADFHV 450
            LL CL   P      G P+P  WP +FHA L+ +  GNL+V DLWYD+PGGRNL++ + Q    D P +DNE  NG++++YTP+ R C+   + VG+LRPDWL  GA YLG    G + CH W   DFITY+ D  T RPV+W F+ G   +V
Sbjct:   12 LLLCLPEAPPASAAAGDPNPTPWPPQFHAKLVMDYHGNLSVADLWYDWPGGRNLHVTRYQLAA-DAPFYDNEWNNGTSFFYTPSRRACHSAAVGVGILRPDWLRPGAVYLGRRDAGGFDCHVWAKADFITYYEDVKTKRPVKWVFYTGRIAYV 163          
BLAST of mRNA_D-mesarthrocarpus_Contig10509.1.1 vs. uniprot
Match: A0A7I8L568_SPIIN (Hypothetical protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8L568_SPIIN)

HSP 1 Score: 154 bits (389), Expect = 9.490e-45
Identity = 70/136 (51.47%), Postives = 91/136 (66.91%), Query Frame = 1
Query:   46 PSPPVWPEKFHALLIQNRTGNLAVVDLWYDFPGGRNLNIIQSQGGEEDGPLWDNERQNGSTYYYT-PATRECNVIDMEVGLLRPDWLSGATYLGEERVGMYSCHKWEDGDFITYWNDKYTGRPVRWTFFDGADFHV 450
            P+P  WP +FHA+L  N +G L+++DLWYD+P GRN NIIQ Q GE    L+D E  NG+++YY   A+R C  +   VG+LRP+WL GATYLG+  V  + C+ WE  DFITY+ D  T RPVRW F+ G   HV
Sbjct:   31 PAPAPWPPQFHAILYANYSGALSIIDLWYDWPNGRNFNIIQKQQGEL---LYDLEWDNGTSFYYNLDASRRCRTMRFPVGILRPNWLGGATYLGQVAVDGFLCNVWEKADFITYYEDVATRRPVRWVFYTGRSIHV 163          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10509.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJJ5_9PHAE7.510e-5264.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2X8A1_9EUKA2.930e-4851.43Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A7S3YC93_9EUKA4.600e-4852.86Hypothetical protein n=2 Tax=Lotharella globosa Ta... [more]
A0A2J6LKB5_LACSA9.890e-4648.00Uncharacterized protein n=3 Tax=Lactuca sativa Tax... [more]
A0A0G4HDP5_9ALVE1.040e-4551.11Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
S8E8A6_9LAMI2.830e-4550.74Transferase, transferring glycosyl groups n=1 Tax=... [more]
A0A6D2HF67_9BRAS4.590e-4551.47Uncharacterized protein n=4 Tax=Coluteocarpeae Tax... [more]
A0A4D6L967_VIGUN5.830e-4549.65Uncharacterized protein n=1 Tax=Vigna unguiculata ... [more]
A0A2T7BY90_9POAL6.940e-4547.71Uncharacterized protein n=3 Tax=Panicum TaxID=4539... [more]
A0A7I8L568_SPIIN9.490e-4551.47Hypothetical protein n=2 Tax=Spirodela intermedia ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10509contigD-mesarthrocarpus_Contig10509:198..1435 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog227086.JGI_V11_90569
Model size456
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464
Exons4
Evalue1.17e-47
EggNOG OGs28P6Y@1|root,2QVTW@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-28_003310.1
Cds size429
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789187.6570916-CDS-D-mesarthrocarpus_Contig10509:197..2811680789187.6570916-CDS-D-mesarthrocarpus_Contig10509:197..281Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10509 198..281 -
1680789187.6731646-CDS-D-mesarthrocarpus_Contig10509:323..3481680789187.6731646-CDS-D-mesarthrocarpus_Contig10509:323..348Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10509 324..348 -
1680789187.6846278-CDS-D-mesarthrocarpus_Contig10509:816..9021680789187.6846278-CDS-D-mesarthrocarpus_Contig10509:816..902Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10509 817..902 -
1680789187.7055998-CDS-D-mesarthrocarpus_Contig10509:1174..14081680789187.7055998-CDS-D-mesarthrocarpus_Contig10509:1174..1408Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10509 1175..1408 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789187.7210126-UTR-D-mesarthrocarpus_Contig10509:1408..14351680789187.7210126-UTR-D-mesarthrocarpus_Contig10509:1408..1435Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10509 1409..1435 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10509.1.1prot_D-mesarthrocarpus_Contig10509.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10509 198..1408 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10509.1.1

>prot_D-mesarthrocarpus_Contig10509.1.1 ID=prot_D-mesarthrocarpus_Contig10509.1.1|Name=mRNA_D-mesarthrocarpus_Contig10509.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=143bp
MGHDGVPSPPVWPEKFHALLIQNRTGNLAVVDLWYDFPGGRNLNIIQSQG
GEEDGPLWDNERQNGSTYYYTPATRECNVIDMEVGLLRPDWLSGATYLGE
ERVGMYSCHKWEDGDFITYWNDKYTGRPVRWTFFDGADFHVRV
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mRNA from alignment at D-mesarthrocarpus_Contig10509:198..1435-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10509.1.1 ID=mRNA_D-mesarthrocarpus_Contig10509.1.1|Name=mRNA_D-mesarthrocarpus_Contig10509.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1238bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10509:198..1435- (Discosporangium mesarthrocarpum MT17_79)
CTCCTGTCCTGCTTGCATCCTCAAGGCATGGGACATGACGGTGTCCCATC CCCGCCGGTATGGCCGGAGAAGTTCCATGCGCTCTTGATACAGAACCGCA CGGGAAATCTCGCCGTTGTAGACCTGTGGTACGATTTTCCTGGGGGACGG AACCTCAATATCATCCAAAGTCAAGGGGGGGAGGAGGATGGTCCGCTTTG GGACAATGAGCGCCAGAACGGGTCGACCTACTACTACACCCCGGCGACAA GGGAGTGCAACGTGAGAATCATCACCGGTCTCGCTCAGATCTTGAAGGAA TAGGGACTTTAACTCCTACCACTTGCTGCTGCTTGCCGTTGTCAGTGGTG CTGAAATATTTTTGGAATTAAGAATTTTGACGACTTCGAGCATGCTGCAC CAGCAACCAATTTGGACCGTAGTTTCTTATTTTGGCTGTTAACTCTGGGG CTCTGGTCACACGATGAGCTACCTGATATTTCCAGTACCTCGCTTCAACG TTTTAAACCATCTGCACTGTTGTGCGCCTGTAGGTGATTGACATGGAGGT AGGCCTTCTCCGCCCGGACTGGCTTTCTGGTGCTACTTATCTCGGGGAGG AACGGGTTGGCATGTACAGGTAGTGAGGATAGGTTTGTGGTGGCTCGTCT TCTTTTCTTTCTCTAGATCCTCTCTTTACATAAGAATAAGATACTCTGCA ACCTGGATGCAGTACTCGAAGTTTTACCTTACCTGTGGAAGGTGTTCTCT TCTACTGTATCTCCTCCACTTCTAAGGCCGTGTTTGCTCTAGGACCTGGG TCCTATTTTACAACAAAGTTGGCTGCGTGAGGTTTGGTGCTAATTTTCTG TTGCCTCCAGCTTCCATCAAATTGCGCGGTGCACCATTTTCCCACCTTAT TTCTTGTGGCCGTCTTGGGTACATGACAATTTTTGGTCAGTGGGTGAGTC ACATGCTAGGGTGCAAGAAGGCGCAGTCTCCCAGTGTCTCACCCTCTGTT TTCCATCTTCTTTTTTTGTTTGGTCTTCTGGATATGCCCCCCCCCCCTCT GCCGCTTACTTTCCATATGCAACATCCCCTGCTTCAGCTGTCACAAATGG GAGGATGGGGATGTACCTGAGAGCAGGGAAATCGCAATTGATCCAGATGC CAAGTTCATCACCTACTGGAATGACAAGTATACTGGGCGTCCAGTTCGCT GGACGTTTTTTGATGGTGCTGATTTTCATGTAAGGGTG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10509:198..1435-

>mRNA_D-mesarthrocarpus_Contig10509.1.1 ID=mRNA_D-mesarthrocarpus_Contig10509.1.1|Name=mRNA_D-mesarthrocarpus_Contig10509.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=429bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10509:198..1435- (Discosporangium mesarthrocarpum MT17_79)
ATGGGACATGACGGTGTCCCATCCCCGCCGGTATGGCCGGAGAAGTTCCA
TGCGCTCTTGATACAGAACCGCACGGGAAATCTCGCCGTTGTAGACCTGT
GGTACGATTTTCCTGGGGGACGGAACCTCAATATCATCCAAAGTCAAGGG
GGGGAGGAGGATGGTCCGCTTTGGGACAATGAGCGCCAGAACGGGTCGAC
CTACTACTACACCCCGGCGACAAGGGAGTGCAACGTGATTGACATGGAGG
TAGGCCTTCTCCGCCCGGACTGGCTTTCTGGTGCTACTTATCTCGGGGAG
GAACGGGTTGGCATGTACAGCTGTCACAAATGGGAGGATGGGGATTTCAT
CACCTACTGGAATGACAAGTATACTGGGCGTCCAGTTCGCTGGACGTTTT
TTGATGGTGCTGATTTTCATGTAAGGGTG
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