mRNA_D-mesarthrocarpus_Contig10508.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10508.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10508.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10508.1.1 vs. uniprot
Match: A0A485LTD1_9STRA (Aste57867_25464 protein n=4 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LTD1_9STRA)

HSP 1 Score: 154 bits (388), Expect = 1.770e-42
Identity = 83/180 (46.11%), Postives = 116/180 (64.44%), Query Frame = 1
Query:    1 HLCKRVGA-RKHKRWVKPVLSDKQKRDRVGFALSHVHGKVVVDDMYDWVHADDKWFYVTKDGRGIYLHPEEDAPKPPRAQNKRFITKMMFLAAVARPRMISD-GVWFDGKIGIWPIADTVAAMRSCKNSKKGIMMLKPATVNAKRYKELMIDKVITAIKARKPRPPGHTIFVQQDGAKAH 534
            H C ++G  R H   ++P+LSD  K  R+  ALS V   +V++DM ++VH D+KWFY++K  R  YL P E  P+  + ++KRFITK+MFL+AVARPR I D G+W+DGKIG WP  ++V A R+  N   G    KP TV    Y+E +IDKV+ AI A+ P+    T+ +Q D A+AH
Sbjct:  121 HRCLKLGLFRAHSNAIRPILSDANKYCRMKHALSFVSSDMVMNDMLNYVHLDEKWFYLSKATRTFYLVPGEREPER-KCKSKRFITKVMFLSAVARPRYIHDTGLWWDGKIGTWPFVESVTAQRASVNRPAGTYETKPITVTKDVYREFIIDKVLPAIAAKWPKID-RTVLLQHDNARAH 298          
BLAST of mRNA_D-mesarthrocarpus_Contig10508.1.1 vs. uniprot
Match: W4GWE0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GWE0_9STRA)

HSP 1 Score: 144 bits (364), Expect = 3.200e-38
Identity = 75/169 (44.38%), Postives = 106/169 (62.72%), Query Frame = 1
Query:   43 VKPVLSDKQKRDRVGFALSHVHG----KVVVDDMYDWVHADDKWFYVTKDGRGIYLHPEEDAPKPPRAQNKRFITKMMFLAAVARPRMISDGV-WFDGKIGIWPIADTVAAMRSCKNSKKGIMMLKPATVNAKRYKELMIDKVITAIKARKPRPPGHTIFVQQDGAKAH 534
            V+P+L+D  K  RV + + H+H     +   DDM + VH D+KWF+ TK  + +YL P E+ P     ++KR+ITK+MFL+AVARPR + D V WFDGKIG W   + V A RS +N   G ++ KP +V    Y++++ID VI AIKA+ PR     I +QQD A+ H
Sbjct:   76 VRPLLTDANKAVRVQWVMKHLHALSSAQYAFDDMMNTVHVDEKWFFATKISKKMYLAPGEEPPHRT-CKSKRYITKVMFLSAVARPRWVDDEVGWFDGKIGTWHFTERVPAERSSRNRAAGTLVTKPVSVTQDIYRKMLIDNVIPAIKAKWPRNSSRCITIQQDNARPH 243          
BLAST of mRNA_D-mesarthrocarpus_Contig10508.1.1 vs. uniprot
Match: A0A6A4YXI9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4YXI9_9STRA)

HSP 1 Score: 145 bits (365), Expect = 6.810e-38
Identity = 74/169 (43.79%), Postives = 107/169 (63.31%), Query Frame = 1
Query:   43 VKPVLSDKQKRDRVGFALSHVH----GKVVVDDMYDWVHADDKWFYVTKDGRGIYLHPEEDAPKPPRAQNKRFITKMMFLAAVARPRMISD-GVWFDGKIGIWPIADTVAAMRSCKNSKKGIMMLKPATVNAKRYKELMIDKVITAIKARKPRPPGHTIFVQQDGAKAH 534
            V+P+L++  K  RVG+A+  +H    G+   DDM ++VH D+KWF+ T+  +  YL P E AP     ++KRFI+K+MFL+AVARPR+  D G WFDGKIG W   + VAA R+ +N   G +  +P +V    YK ++IDKVI  IK++ P   G  + +QQD A+ H
Sbjct:  142 VRPMLTEANKAVRVGWAMGLIHASDHGEYTFDDMMEYVHVDEKWFFATRVSKRYYLAPGE-APPHRTCKSKRFISKVMFLSAVARPRLNDDTGEWFDGKIGTWHFTEKVAAARTSRNRPAGTLETQPVSVTRPVYKAMLIDKVIPTIKSKWPSSAGRNVIIQQDNARPH 309          
BLAST of mRNA_D-mesarthrocarpus_Contig10508.1.1 vs. uniprot
Match: A0A4Q9LWQ4_9MICR (Uncharacterized protein (Fragment) n=1 Tax=Hamiltosporidium tvaerminnensis TaxID=1176355 RepID=A0A4Q9LWQ4_9MICR)

HSP 1 Score: 139 bits (351), Expect = 8.740e-38
Identity = 82/171 (47.95%), Postives = 109/171 (63.74%), Query Frame = 1
Query:   43 VKPVLSDKQKRDRVGFALSHVH----GKVVVDDMYDWVHADDKWFYVTKDGRGIYLHPEEDAPKPPRAQNKRFITKMMFLAAVARPRMISDG-VWFDGKIGIWPIADTVAAMRSCKNSKKGIMMLKPA-TVNAKRYKELMIDKVITAIKAR-KPRPPGHTIFVQQDGAKAH 534
            VKP L+DK K DR+ F LS V+    G ++ DD+YD+VH D+KWFY+TK  R  YL   E+ P+    ++KRFITK+MF+AAVARPR  +   ++FDGKIGIWP      A R+ KN  KG M+ K   +V A   K ++ID VI AIK++  P      ++VQQD AK H
Sbjct:   93 VKPTLTDKNKMDRLKFCLSKVNLANNGDLLFDDLYDYVHIDEKWFYLTKVKRSYYLMLNEENPER-NCKSKRFITKIMFMAAVARPRYDAHRKLYFDGKIGIWPFVYQEPARRNSKNRAKGTMITKNVESVAAVHCKNMIIDNVIPAIKSKFPPADKKKILYVQQDNAKPH 262          
BLAST of mRNA_D-mesarthrocarpus_Contig10508.1.1 vs. uniprot
Match: W4GP40_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GP40_9STRA)

HSP 1 Score: 140 bits (353), Expect = 3.360e-37
Identity = 73/170 (42.94%), Postives = 104/170 (61.18%), Query Frame = 1
Query:   28 KHKRWVKPVLSDKQKRDRVGFALSHVHGKVVVDDMYDWVHADDKWFYVTKDGRGIYLHPEEDAPKPPRAQNKRFITKMMFLAAVARPRM-ISDGVWFDGKIGIWPIADTVAAMRSCKNSKKGIMMLKPATVNAKRYKELMIDKVITAIKARKPRPPGHTIFVQQDGAKAH 534
            +H   +KP L++  K  R+ +A   +   ++V DM D+VH D+KWFY+T+  + +YL P E+ P     ++KRFITK+MFL+AVARPR   +   WFDG+IG W    TV A RS +N   G M+  P TV    Y++++ID VI AIKA+ P      I +QQD A+ H
Sbjct:   51 RHSISIKPQLTEANKAARLKWAFERLGPDLMVHDMMDYVHVDEKWFYMTRVKKTLYLLPGEEPPHRS-TKSKRFITKVMFLSAVARPRWNYNTNEWFDGRIGTWHFTQTVPAQRSSRNRPSGTMVTVPCTVTRDTYRDMLIDNVIPAIKAKWPNDKAARILLQQDNARPH 219          
BLAST of mRNA_D-mesarthrocarpus_Contig10508.1.1 vs. uniprot
Match: A0A6A4Z7D1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z7D1_9STRA)

HSP 1 Score: 142 bits (358), Expect = 4.910e-37
Identity = 78/181 (43.09%), Postives = 118/181 (65.19%), Query Frame = 1
Query:    7 CKRVGARKHKRWVKPVLSDKQKRDRVGFALSHV----HGKVVVDDMYDWVHADDKWFYVTKDGRGIYLHPEEDAPKPPRAQNKRFITKMMFLAAVARPRMISDGVWFDGKIGIWPIADTVAAMRSCKNSKKGIMMLKPATVNAKRYKELMIDKVITAIKARKPRPPGHT-IFVQQDGAKAH 534
            C R+ AR    +VKP L+    ++R+ +A+S +    +G  + DDM+D VH D+KWFY+TK  R  Y++ E++A      ++KRFITK+MFLAA+ARPR+  +G  FDGKIG+WP  + + A R+ KN  KG ++  P +V+AK Y E++++ V+ AIKA+ PR    T + +QQD A  H
Sbjct:  141 CPRLKARSS--YVKPFLTPSNIQERLRYAISFLQPLSNGNHIFDDMHDCVHIDEKWFYLTKVKRKFYVY-EDEAVAARFVKSKRFITKVMFLAAIARPRVDFNGNIFDGKIGVWPFVEKLPAKRNSKNRAKGTIVTTPQSVDAKVYLEMVLNNVVPAIKAKFPRSTLRTGVTIQQDNASPH 318          
BLAST of mRNA_D-mesarthrocarpus_Contig10508.1.1 vs. uniprot
Match: A0A485LTN5_9STRA (Aste57867_25287 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LTN5_9STRA)

HSP 1 Score: 140 bits (354), Expect = 1.560e-36
Identity = 77/178 (43.26%), Postives = 108/178 (60.67%), Query Frame = 1
Query:    4 LCKRVGARKHKRWVKPVLSDKQKRDRVGFALSHVHGKVVVDDMYDWVHADDKWFYVTKDGRGIYLHPEEDAPKPPRAQNKRFITKMMFLAAVARPRMISD-GVWFDGKIGIWPIADTVAAMRSCKNSKKGIMMLKPATVNAKRYKELMIDKVITAIKARKPRPPGHTIFVQQDGAKAH 534
            L K+   R H R ++P+L+D  K  RV FALS V+G + +++M + +H D+KWFY+T + R  YL P E+ P   + ++KR+ITK++FL AVARP  + +   W+DGKIG WP  +TV A RS  N + G    K   V    Y+  +IDKV+  I A  P P   TI +Q D AKAH
Sbjct:  106 LSKKGIFRAHSRAIRPLLTDANKYSRVKFALSFVNGDLEMNEMMNHIHLDEKWFYLTPERRKFYLIPHEELPDR-KCKSKRYITKVLFLTAVARPHYVEEIQSWWDGKIGTWPFLETVLAQRSSANREAGTPETKVMNVTKYVYRSYLIDKVLPTIAAVWPNPDA-TIVLQHDNAKAH 281          
BLAST of mRNA_D-mesarthrocarpus_Contig10508.1.1 vs. uniprot
Match: A0A4Q9LLI7_9MICR (Uncharacterized protein (Fragment) n=1 Tax=Hamiltosporidium tvaerminnensis TaxID=1176355 RepID=A0A4Q9LLI7_9MICR)

HSP 1 Score: 139 bits (349), Expect = 2.690e-36
Identity = 84/173 (48.55%), Postives = 109/173 (63.01%), Query Frame = 1
Query:   43 VKPVLSDKQKRDRVGFALSHVH----GKVVVDDMYDWVHADDKWFYVTKDGRGIYLHPEEDAPKPPRAQNKRFITKMMFLAAVARPRMISDGV-WFDGKIGIWPIADTVAAMRSCKNSKKGIMMLKPA-TVNAKRYKELMIDKVITAIKARKPRPPGH---TIFVQQDGAKAH 534
            VKP L+DK K DR+ F LS V+    G  + DD+YD+VH D+KWFY+TK  R  YL   E+ P+    ++KRFI K+MF+AAVARPR  +    +FDGKIGIWP      A R+ KN  KG M+ K   +V A   K ++ID VI AIK++   PP +   TI+VQQD AK H
Sbjct:  126 VKPTLTDKNKMDRLKFCLSKVNLANNGDFLFDDLYDYVHIDEKWFYLTKVKRSYYLMLNEEEPER-NYKSKRFIMKIMFMAAVARPRYDAHRKNYFDGKIGIWPFVYQEPAQRNSKNRAKGTMITKNVESVTAVHCKNMIIDNVIPAIKSK--FPPAYKKKTIYVQQDNAKPH 295          
BLAST of mRNA_D-mesarthrocarpus_Contig10508.1.1 vs. uniprot
Match: A0A6A4XI70_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4XI70_9STRA)

HSP 1 Score: 135 bits (341), Expect = 6.340e-36
Identity = 75/171 (43.86%), Postives = 102/171 (59.65%), Query Frame = 1
Query:   25 RKHKRWVKPVLSDKQKRDRVGFALSHVHGKVVVDDMYDWVHADDKWFYVTKDGRGIYLHPEEDAPKPPRAQNKRFITKMMFLAAVARPRMISD-GVWFDGKIGIWPIADTVAAMRSCKNSKKGIMMLKPATVNAKRYKELMIDKVITAIKARKPRPPGHTIFVQQDGAKAH 534
            R H   ++PVL++  K  R+ FA+S V+  +  D+M + VH D+KWFY+TK  R  YL P E  P+  + ++KRFITK+MFL+AVARPR   D G W+DGKIG WP  + V A R   N   G    KP TV    Y+E + DKV+  I ++ P P    + +Q D A AH
Sbjct:  120 RAHSSAIRPVLTEANKYARMKFAMSFVNANMQFDEMLEHVHLDEKWFYLTKVTRTFYLVPGEAEPQR-KCKSKRFITKVMFLSAVARPRYNDDTGKWWDGKIGTWPFVERVQARRDSVNRAAGTYEAKPITVTKDVYREFLTDKVLPQIVSKWPSPT-KKVLLQHDNALAH 288          
BLAST of mRNA_D-mesarthrocarpus_Contig10508.1.1 vs. uniprot
Match: A0A485LSB2_9STRA (Aste57867_23454 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LSB2_9STRA)

HSP 1 Score: 139 bits (351), Expect = 6.790e-36
Identity = 76/171 (44.44%), Postives = 104/171 (60.82%), Query Frame = 1
Query:   25 RKHKRWVKPVLSDKQKRDRVGFALSHVHGKVVVDDMYDWVHADDKWFYVTKDGRGIYLHPEEDAPKPPRAQNKRFITKMMFLAAVARPRMISD-GVWFDGKIGIWPIADTVAAMRSCKNSKKGIMMLKPATVNAKRYKELMIDKVITAIKARKPRPPGHTIFVQQDGAKAH 534
            R H   ++P+L+D  K +RV FALS +     V +M + VH D+KWFY+TK+ R  YL P E+ P   + ++KRFITK+MFL AVARPR + D G W+DGK+G WP   T  A+RS  N   G    K  TV    Y+  +++KV+ A+ +  P PP   I +Q D AKAH
Sbjct:  130 RSHSSALRPLLTDANKLNRVKFALSFIKPGGEVCEMNNHVHLDEKWFYLTKERRTYYLIPGEEGPDR-KCKSKRFITKVMFLTAVARPRYVDDLGTWWDGKVGTWPFVQTANALRSSVNRPAGTPETKVVTVTKDVYRSYLVEKVMPAVVSSWPGPPTQ-ILLQHDNAKAH 298          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10508.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A485LTD1_9STRA1.770e-4246.11Aste57867_25464 protein n=4 Tax=Aphanomyces stella... [more]
W4GWE0_9STRA3.200e-3844.38Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A6A4YXI9_9STRA6.810e-3843.79Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A4Q9LWQ4_9MICR8.740e-3847.95Uncharacterized protein (Fragment) n=1 Tax=Hamilto... [more]
W4GP40_9STRA3.360e-3742.94Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A6A4Z7D1_9STRA4.910e-3743.09Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A485LTN5_9STRA1.560e-3643.26Aste57867_25287 protein n=1 Tax=Aphanomyces stella... [more]
A0A4Q9LLI7_9MICR2.690e-3648.55Uncharacterized protein (Fragment) n=1 Tax=Hamilto... [more]
A0A6A4XI70_9STRA6.340e-3643.86Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A485LSB2_9STRA6.790e-3644.44Aste57867_23454 protein n=1 Tax=Aphanomyces stella... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10508contigD-mesarthrocarpus_Contig10508:15..559 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog157072.XP_008874808.1
Model size534
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue7.96e-36
EggNOG OGs2CMKC@1|root,2QQNW@2759|Eukaryota
Cds size534
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789187.608459-CDS-D-mesarthrocarpus_Contig10508:14..4351680789187.608459-CDS-D-mesarthrocarpus_Contig10508:14..435Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10508 15..435 -
1680789187.619235-CDS-D-mesarthrocarpus_Contig10508:446..5591680789187.619235-CDS-D-mesarthrocarpus_Contig10508:446..559Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10508 447..559 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10508.1.1prot_D-mesarthrocarpus_Contig10508.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10508 15..559 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10508.1.1

>prot_D-mesarthrocarpus_Contig10508.1.1 ID=prot_D-mesarthrocarpus_Contig10508.1.1|Name=mRNA_D-mesarthrocarpus_Contig10508.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=178bp
HLCKRVGARKHKRWVKPVLSDKQKRDRVGFALSHVHGKVVVDDMYDWVHA
DDKWFYVTKDGRGIYLHPEEDAPKPPRAQNKRFITKMMFLAAVARPRMIS
DGVWFDGKIGIWPIADTVAAMRSCKNSKKGIMMLKPATVNAKRYKELMID
KVITAIKARKPRPPGHTIFVQQDGAKAH
back to top

mRNA from alignment at D-mesarthrocarpus_Contig10508:15..559-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10508.1.1 ID=mRNA_D-mesarthrocarpus_Contig10508.1.1|Name=mRNA_D-mesarthrocarpus_Contig10508.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=545bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10508:15..559- (Discosporangium mesarthrocarpum MT17_79)
CACCTGTGCAAGCGGGTGGGAGCGAGGAAGCATAAACGGTGGGTCAAGCC GGTGCTGTCGGACAAGCAGAAGCGCGATAGGGTGGGTTTTGCGCTGAGCC ACGTGCACGGAAAGTAGGAGCTAGGGTGGTGGTGGACGACATGTACGACT GGGTCCATGCGGATGATAAGTGGTTCTACGTGACGAAGGACGGGAGGGGA ATTTACCTGCACCCAGAAGAGGACGCCCCCAAACCGCCAAGGGCCCAGAA CAAACGATTCATCACCAAGATGATGTTCCTTGCTGCTGTGGCAAGGCCTA GGATGATCTCCGACGGGGTGTGGTTTGACGGCAAGATCGGTATCTGGCCC ATCGCAGATACTGTCGCGGCAATGCGCAGCTGTAAGAACTCCAAGAAGGG CATTATGATGCTGAAACCAGCTACGGTCAACGCGAAGAGGTACAAGGAAC TCATGATCGATAAGGTCATCACCGCAATCAAGGCGAGAAAGCCTAGACCA CCAGGTCACACGATCTTCGTGCAGCAGGATGGTGCAAAGGCGCAC
back to top

Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10508:15..559-

>mRNA_D-mesarthrocarpus_Contig10508.1.1 ID=mRNA_D-mesarthrocarpus_Contig10508.1.1|Name=mRNA_D-mesarthrocarpus_Contig10508.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=534bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10508:15..559- (Discosporangium mesarthrocarpum MT17_79)
CACCTGTGCAAGCGGGTGGGAGCGAGGAAGCATAAACGGTGGGTCAAGCC
GGTGCTGTCGGACAAGCAGAAGCGCGATAGGGTGGGTTTTGCGCTGAGCC
ACGTGCACGGAAAGGTGGTGGTGGACGACATGTACGACTGGGTCCATGCG
GATGATAAGTGGTTCTACGTGACGAAGGACGGGAGGGGAATTTACCTGCA
CCCAGAAGAGGACGCCCCCAAACCGCCAAGGGCCCAGAACAAACGATTCA
TCACCAAGATGATGTTCCTTGCTGCTGTGGCAAGGCCTAGGATGATCTCC
GACGGGGTGTGGTTTGACGGCAAGATCGGTATCTGGCCCATCGCAGATAC
TGTCGCGGCAATGCGCAGCTGTAAGAACTCCAAGAAGGGCATTATGATGC
TGAAACCAGCTACGGTCAACGCGAAGAGGTACAAGGAACTCATGATCGAT
AAGGTCATCACCGCAATCAAGGCGAGAAAGCCTAGACCACCAGGTCACAC
GATCTTCGTGCAGCAGGATGGTGCAAAGGCGCAC
back to top