mRNA_D-mesarthrocarpus_Contig10506.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10506.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10506.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10506.1.1 vs. uniprot
Match: D8LN95_ECTSI (RPN1_RPN2_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN95_ECTSI)

HSP 1 Score: 337 bits (864), Expect = 6.710e-110
Identity = 171/191 (89.53%), Postives = 184/191 (96.34%), Query Frame = 1
Query:    1 QLMTTEGNSWLYKNKDHGMMSAAASLGTILLWNVEEGLTQIDKFLYSSEDYIKAGAVLAMGIVSSGVRDESDPALALLSDHVESPSHSMRCGAYVGLGIAYAGARRGDVEELLTPLVANTESANMVEVGLAALSLGMIFVGTCNEGVGTVLVQRLMESTDTELEQPMARLVSLGLGLLFLGKNEKADAMME 573
            QLMTTEGN+WLYKNKDHGMMSAAASLGTILLWNVEEGL QIDKF +S+EDYIKAGAVLA+GIVSSGVR+ESDPALALL+DHVESPSH+MRCGA VGLG+AYAGARR DV ELLTPLVANTE+ANMVEVGLAALSLGMIFVGTCNE VG+VLVQRLMES+DTELEQPMARLVSLGLGLL +GKNE+ADAMME
Sbjct:  479 QLMTTEGNAWLYKNKDHGMMSAAASLGTILLWNVEEGLMQIDKFFHSNEDYIKAGAVLAVGIVSSGVRNESDPALALLADHVESPSHAMRCGACVGLGVAYAGARREDVVELLTPLVANTENANMVEVGLAALSLGMIFVGTCNEEVGSVLVQRLMESSDTELEQPMARLVSLGLGLLLMGKNEQADAMME 669          
BLAST of mRNA_D-mesarthrocarpus_Contig10506.1.1 vs. uniprot
Match: A0A6H5K5T2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5T2_9PHAE)

HSP 1 Score: 291 bits (744), Expect = 2.300e-89
Identity = 154/194 (79.38%), Postives = 168/194 (86.60%), Query Frame = 1
Query:    1 QLMTTEGNSWLYKNKDHGMMSAAASLGTILLWNVEEGLTQIDKFLYSSEDYIKAGAVLAMGIVS---SGVRDESDPALALLSDHVESPSHSMRCGAYVGLGIAYAGARRGDVEELLTPLVANTESANMVEVGLAALSLGMIFVGTCNEGVGTVLVQRLMESTDTELEQPMARLVSLGLGLLFLGKNEKADAMME 573
            QLMTTEGN+WLYKNKDHGMMSAAASLGTILLWNVEEGL Q  + +   +  +  G   A        SGVR+ESDPALALL+DHVESPSH+MRCGA VGLG+AYAGARR DV ELLTPLVANTE+ANMVEVGLAALSLGMIFVGTCNE VG+VLVQRLMES+DTELEQPMARLVSLGLGLLF+GKNE+ADAMME
Sbjct:  474 QLMTTEGNAWLYKNKDHGMMSAAASLGTILLWNVEEGLMQAHRQVLPLKRGLHQGRSCACRRYRQQISGVRNESDPALALLADHVESPSHAMRCGACVGLGVAYAGARREDVVELLTPLVANTENANMVEVGLAALSLGMIFVGTCNEEVGSVLVQRLMESSDTELEQPMARLVSLGLGLLFIGKNEQADAMME 667          
BLAST of mRNA_D-mesarthrocarpus_Contig10506.1.1 vs. uniprot
Match: A0A836CK10_9STRA (26S proteasome non-ATPase regulatory subunit 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK10_9STRA)

HSP 1 Score: 286 bits (731), Expect = 6.740e-88
Identity = 144/190 (75.79%), Postives = 165/190 (86.84%), Query Frame = 1
Query:    4 LMTTEGNSWLYKNKDHGMMSAAASLGTILLWNVEEGLTQIDKFLYSSEDYIKAGAVLAMGIVSSGVRDESDPALALLSDHVESPSHSMRCGAYVGLGIAYAGARRGDVEELLTPLVANTESANMVEVGLAALSLGMIFVGTCNEGVGTVLVQRLMESTDTELEQPMARLVSLGLGLLFLGKNEKADAMME 573
            L+T EGNSWLYKNKDHGM+SAAAS+G +LLWNVEEGLTQIDKFLYS ED+I+AGA LA+GIVSSGVR+ESDPALALL +H E  + +MR  A  GLGIAYAGARR DV ELL PLVANT++A+M EVGLAALSLG++F GTC+E VG+ L QRLMESTDTEL+Q MAR VSLGLGLLFL K EKADA++E
Sbjct:  426 LITPEGNSWLYKNKDHGMLSAAASIGMVLLWNVEEGLTQIDKFLYSGEDHIRAGAALAVGIVSSGVRNESDPALALLGEHAEGANAAMRVAAACGLGIAYAGARRTDVMELLVPLVANTDTADMAEVGLAALSLGLVFAGTCDEEVGSALAQRLMESTDTELDQGMARFVSLGLGLLFLNKQEKADAVLE 615          
BLAST of mRNA_D-mesarthrocarpus_Contig10506.1.1 vs. uniprot
Match: A0A7S2V4A2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4A2_9STRA)

HSP 1 Score: 275 bits (702), Expect = 1.190e-83
Identity = 139/191 (72.77%), Postives = 169/191 (88.48%), Query Frame = 1
Query:    4 LMTTEGNSWLYKNKDHGMMSAAASLGTILLWNVEEGLTQIDKFLYSSEDYIKAGAVLAMGIVSSGVRDESDPALALLSDHVESPSHSMRCGAYVGLGIAYAGARRGDVEELLTPLVANTES-ANMVEVGLAALSLGMIFVGTCNEGVGTVLVQRLMESTDTELEQPMARLVSLGLGLLFLGKNEKADAMME 573
            LMTTEG+SWLYKNKDHGM+SAAASLG ILLWNVEEGLTQIDKF+YSS+DYIKAGA LA+G+VS+ VR+ESDPALALL+DHV+  SH+++  + +GLG+AYAG+ R DV E L P+VANTES A+M EV LAALSLG+IFVG+CNE VG+ LVQRLMES+D EL+Q ++R ++LGLGLLFLGK EKA+AM+E
Sbjct:  417 LMTTEGSSWLYKNKDHGMLSAAASLGMILLWNVEEGLTQIDKFMYSSDDYIKAGAALAVGVVSATVRNESDPALALLADHVKEGSHNLKVCSCIGLGLAYAGSWREDVMEELLPVVANTESNASMTEVSLAALSLGLIFVGSCNEEVGSTLVQRLMESSDAELDQTVSRFLALGLGLLFLGKTEKAEAMLE 607          
BLAST of mRNA_D-mesarthrocarpus_Contig10506.1.1 vs. uniprot
Match: A0A7R9Z9Y4_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z9Y4_9STRA)

HSP 1 Score: 256 bits (655), Expect = 3.520e-80
Identity = 130/193 (67.36%), Postives = 162/193 (83.94%), Query Frame = 1
Query:    1 QLMTTEGNSWLYKNKDHGMMSAAASLGTILLWNVEEGLTQIDKFLYSSEDYIKAGAVLAMGIVSSGVRDESDPALALLSDHVESPSHSMRCGAYVGLGIAYAGARRGDVEELLTPLVANTES--ANMVEVGLAALSLGMIFVGTCNEGVGTVLVQRLMESTDTELEQPMARLVSLGLGLLFLGKNEKADAMME 573
            +LMT + N WLYKNKDHGMMSAAASLG+ILLWNVEEGLTQIDKFLYSSEDY+KAGA LA+GI+SSGV++++DPALALL++HVE  +H+M+C A  GLGIAYAG+ R +V +LL P+V ++E   ANM+EV LA L+LGMI+VG C+E VG+ +VQRLME T+ EL+   AR + LGLGLLFLG+ E ADAM+E
Sbjct:   25 KLMTPD-NEWLYKNKDHGMMSAAASLGSILLWNVEEGLTQIDKFLYSSEDYVKAGAALAVGILSSGVKNDADPALALLTEHVEGSNHTMKCAACTGLGIAYAGSGREEVMDLLLPVVESSEGGPANMLEVSLAGLALGMIYVGKCDETVGSTIVQRLMEGTEEELDHSHARFLCLGLGLLFLGRMEMADAMLE 216          
BLAST of mRNA_D-mesarthrocarpus_Contig10506.1.1 vs. uniprot
Match: A0A8J9X3V5_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X3V5_PHATR)

HSP 1 Score: 259 bits (661), Expect = 8.090e-80
Identity = 133/193 (68.91%), Postives = 161/193 (83.42%), Query Frame = 1
Query:    1 QLMTTEGNSWLYKNKDHGMMSAAASLGTILLWNVEEGLTQIDKFLYSSEDYIKAGAVLAMGIVSSGVRDESDPALALLSDHVESPSHSMRCGAYVGLGIAYAGARRGDVEELLTPLVANTESA--NMVEVGLAALSLGMIFVGTCNEGVGTVLVQRLMESTDTELEQPMARLVSLGLGLLFLGKNEKADAMME 573
            +LMT + N WLYKNKDHGMM+AAASLG+ILLWNVEEGLTQIDKFLYS+EDY+KAGA LA+GIVSSGVR+++DPALALLS+HVE  SH M+C A  GLGIAYAG+ R DV E+LTP+V ++E     M+EV LA L+LGMIFVGTC++ VG  +VQRLME+TD EL+   AR + LGL LLFLG+ EKA+AM+E
Sbjct:  150 KLMTPD-NDWLYKNKDHGMMAAAASLGSILLWNVEEGLTQIDKFLYSNEDYVKAGAALAVGIVSSGVRNDADPALALLSEHVEGESHVMKCAACTGLGIAYAGSAREDVMEILTPVVESSEGGPTTMMEVSLAGLALGMIFVGTCDDMVGGTIVQRLMEATDDELDHTHARFLCLGLALLFLGQMEKAEAMIE 341          
BLAST of mRNA_D-mesarthrocarpus_Contig10506.1.1 vs. uniprot
Match: B7G2F7_PHATC (Regulatory proteasome non-atpase subunit 1 n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G2F7_PHATC)

HSP 1 Score: 259 bits (661), Expect = 7.040e-78
Identity = 133/193 (68.91%), Postives = 161/193 (83.42%), Query Frame = 1
Query:    1 QLMTTEGNSWLYKNKDHGMMSAAASLGTILLWNVEEGLTQIDKFLYSSEDYIKAGAVLAMGIVSSGVRDESDPALALLSDHVESPSHSMRCGAYVGLGIAYAGARRGDVEELLTPLVANTESA--NMVEVGLAALSLGMIFVGTCNEGVGTVLVQRLMESTDTELEQPMARLVSLGLGLLFLGKNEKADAMME 573
            +LMT + N WLYKNKDHGMM+AAASLG+ILLWNVEEGLTQIDKFLYS+EDY+KAGA LA+GIVSSGVR+++DPALALLS+HVE  SH M+C A  GLGIAYAG+ R DV E+LTP+V ++E     M+EV LA L+LGMIFVGTC++ VG  +VQRLME+TD EL+   AR + LGL LLFLG+ EKA+AM+E
Sbjct:  414 KLMTPD-NDWLYKNKDHGMMAAAASLGSILLWNVEEGLTQIDKFLYSNEDYVKAGAALAVGIVSSGVRNDADPALALLSEHVEGESHVMKCAACTGLGIAYAGSAREDVMEILTPVVESSEGGPTTMMEVSLAGLALGMIFVGTCDDMVGGTIVQRLMEATDDELDHTHARFLCLGLALLFLGQMEKAEAMIE 605          
BLAST of mRNA_D-mesarthrocarpus_Contig10506.1.1 vs. uniprot
Match: A0A7S2KXN5_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KXN5_9STRA)

HSP 1 Score: 259 bits (662), Expect = 1.000e-77
Identity = 131/195 (67.18%), Postives = 162/195 (83.08%), Query Frame = 1
Query:    1 QLMTTEGNSWLYKNKDHGMMSAAASLGTILLWNVEEGLTQIDKFLYSSEDYIKAGAVLAMGIVSSGVRDESDPALALLSDHVES---PSHSMRCGAYVGLGIAYAGARRGDVEELLTPLVANTE-SANMVEVGLAALSLGMIFVGTCNEGVGTVLVQRLMESTDTELEQPMARLVSLGLGLLFLGKNEKADAMME 573
            +LMT   N WLYKNK+HGMMSAAASLG+ILLWNVEEGLTQIDKFLYSSEDY+KAGA LA+GIVSSGVR+++DP LALL +HVE     SH M+C A  GLGIAYAG++R DV ELL P++ NTE +ANM+EV LAAL+LGMI+VG+C++  GT ++QRLMES++T+L    ARL+ +GL LLFLGK ++ DAM+E
Sbjct:  466 KLMTPNDNEWLYKNKEHGMMSAAASLGSILLWNVEEGLTQIDKFLYSSEDYVKAGAALAIGIVSSGVRNDADPVLALLQEHVEEGSESSHIMKCAAITGLGIAYAGSKREDVMELLVPIIENTEDNANMLEVSLAALALGMIYVGSCDDVAGTTMLQRLMESSETDLNHSHARLLCVGLALLFLGKLDQCDAMVE 660          
BLAST of mRNA_D-mesarthrocarpus_Contig10506.1.1 vs. uniprot
Match: A0A7S2EGD7_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EGD7_TRICV)

HSP 1 Score: 255 bits (652), Expect = 1.680e-76
Identity = 128/193 (66.32%), Postives = 162/193 (83.94%), Query Frame = 1
Query:    1 QLMTTEGNSWLYKNKDHGMMSAAASLGTILLWNVEEGLTQIDKFLYSSEDYIKAGAVLAMGIVSSGVRDESDPALALLSDHVESPSHSMRCGAYVGLGIAYAGARRGDVEELLTPLVANTE--SANMVEVGLAALSLGMIFVGTCNEGVGTVLVQRLMESTDTELEQPMARLVSLGLGLLFLGKNEKADAMME 573
            +LMT + N WLYKNKDHGMMSA ASLG+ILLWNVEEGLTQIDKFLYSSEDY+KAGA LA+GI+SSGVR+++DPALALL++HVE  +H+M+C A  GLGIAYAG+ R +V +LL P++ ++E  + NM+EV LA L+LGMI+VG C+E  G+ +VQRLME+T+ EL+Q  AR + LGLGLLFLG+ E ADAM+E
Sbjct:  430 KLMTPD-NEWLYKNKDHGMMSATASLGSILLWNVEEGLTQIDKFLYSSEDYVKAGAALAVGILSSGVRNDADPALALLTEHVEGNNHTMKCAACTGLGIAYAGSAREEVMDLLLPVIESSEGGATNMLEVALAGLALGMIYVGKCDETAGSTIVQRLMEATEEELDQSHARFLCLGLGLLFLGRMEMADAMLE 621          
BLAST of mRNA_D-mesarthrocarpus_Contig10506.1.1 vs. uniprot
Match: A0A7S2G4T1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G4T1_9STRA)

HSP 1 Score: 254 bits (648), Expect = 3.870e-76
Identity = 124/191 (64.92%), Postives = 152/191 (79.58%), Query Frame = 1
Query:    1 QLMTTEGNSWLYKNKDHGMMSAAASLGTILLWNVEEGLTQIDKFLYSSEDYIKAGAVLAMGIVSSGVRDESDPALALLSDHVESPSHSMRCGAYVGLGIAYAGARRGDVEELLTPLVANTESANMVEVGLAALSLGMIFVGTCNEGVGTVLVQRLMESTDTELEQPMARLVSLGLGLLFLGKNEKADAMME 573
            +LMT E + WLYKNK+HGMMSAAASLG I LW++EEGL Q+DKFLY++ED+IKAGAVL +GIV SG+R+ESDP +ALL +H+ES    ++C A    GIAYAG+ R DV E L P+VA TESA+M +VGLAALSLG +FVGTCNE  G  L+QRLMES+D EL+ PMAR + LGLGLLF GK EK + M+E
Sbjct:  389 KLMTPEDSEWLYKNKEHGMMSAAASLGMIFLWDLEEGLVQLDKFLYTAEDHIKAGAVLGIGIVGSGIRNESDPQIALLPEHLESDKPIIKCAACAAFGIAYAGSAREDVMEYLVPVVAETESADMTQVGLAALSLGQVFVGTCNEEAGGALIQRLMESSDAELDHPMARFLCLGLGLLFFGKMEKCEGMLE 579          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10506.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN95_ECTSI6.710e-11089.53RPN1_RPN2_N domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5K5T2_9PHAE2.300e-8979.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CK10_9STRA6.740e-8875.7926S proteasome non-ATPase regulatory subunit 2 n=1... [more]
A0A7S2V4A2_9STRA1.190e-8372.77Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9Z9Y4_9STRA3.520e-8067.36Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A8J9X3V5_PHATR8.090e-8068.91Hypothetical protein (Fragment) n=1 Tax=Phaeodacty... [more]
B7G2F7_PHATC7.040e-7868.91Regulatory proteasome non-atpase subunit 1 n=1 Tax... [more]
A0A7S2KXN5_9STRA1.000e-7767.18Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
A0A7S2EGD7_TRICV1.680e-7666.32Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2G4T1_9STRA3.870e-7664.92Hypothetical protein n=1 Tax=Florenciella parvula ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10506contigD-mesarthrocarpus_Contig10506:381..2335 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LN95
Preferred nameRPN1
PFAMsPC_rep
Model size573
Max annot lvl2759|Eukaryota
KEGG koko:K03028
KEGG Pathwayko03050,ko05169,map03050,map05169
KEGG ModuleM00341
Hectar predicted targeting categoryother localisation
GOsGO:0000502,GO:0001101,GO:0002376,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005838,GO:0005886,GO:0005911,GO:0006508,GO:0006511,GO:0006807,GO:0006950,GO:0006952,GO:0006955,GO:0006970,GO:0006972,GO:0008150,GO:0008152,GO:0008540,GO:0009056,GO:0009057,GO:0009506,GO:0009628,GO:0009719,GO:0009725,GO:0009751,GO:0009987,GO:0010033,GO:0010498,GO:0014070,GO:0016020,GO:0019538,GO:0019941,GO:0022624,GO:0030054,GO:0030163,GO:0031597,GO:0032182,GO:0032991,GO:0034515,GO:0042221,GO:0042493,GO:0043130,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0045087,GO:0046677,GO:0050789,GO:0050794,GO:0050896,GO:0051603,GO:0051726,GO:0055044,GO:0065007,GO:0071704,GO:0071944,GO:1901564,GO:1901565,GO:1901575,GO:1901700,GO:1902494,GO:1905368,GO:1905369
Exons4
Evalue3.19e-109
EggNOG OGsCOG5110@1|root,KOG2005@2759|Eukaryota
Descriptionregulation of protein catabolic process
Cds size567
COG categoryO
BRITEko00000,ko00001,ko00002,ko03051
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789187.4361022-UTR-D-mesarthrocarpus_Contig10506:380..3861680789187.4361022-UTR-D-mesarthrocarpus_Contig10506:380..386Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10506 381..386 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789187.4483433-CDS-D-mesarthrocarpus_Contig10506:386..5001680789187.4483433-CDS-D-mesarthrocarpus_Contig10506:386..500Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10506 387..500 +
1680789187.4612494-CDS-D-mesarthrocarpus_Contig10506:977..10511680789187.4612494-CDS-D-mesarthrocarpus_Contig10506:977..1051Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10506 978..1051 +
1680789187.4736521-CDS-D-mesarthrocarpus_Contig10506:1608..17951680789187.4736521-CDS-D-mesarthrocarpus_Contig10506:1608..1795Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10506 1609..1795 +
1680789187.4877741-CDS-D-mesarthrocarpus_Contig10506:2143..23351680789187.4877741-CDS-D-mesarthrocarpus_Contig10506:2143..2335Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10506 2144..2335 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10506.1.1prot_D-mesarthrocarpus_Contig10506.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10506 387..2335 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10506.1.1

>prot_D-mesarthrocarpus_Contig10506.1.1 ID=prot_D-mesarthrocarpus_Contig10506.1.1|Name=mRNA_D-mesarthrocarpus_Contig10506.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=189bp
MTTEGNSWLYKNKDHGMMSAAASLGTILLWNVEEGLTQIDKFLYSSEDYI
KAGAVLAMGIVSSGVRDESDPALALLSDHVESPSHSMRCGAYVGLGIAYA
GARRGDVEELLTPLVANTESANMVEVGLAALSLGMIFVGTCNEGVGTVLV
QRLMESTDTELEQPMARLVSLGLGLLFLGKNEKADAMME
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mRNA from alignment at D-mesarthrocarpus_Contig10506:381..2335+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10506.1.1 ID=mRNA_D-mesarthrocarpus_Contig10506.1.1|Name=mRNA_D-mesarthrocarpus_Contig10506.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1955bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10506:381..2335+ (Discosporangium mesarthrocarpum MT17_79)
CAGCTCATGACAACTGAGGGCAACTCTTGGCTGTACAAGAACAAAGACCA CGGGATGATGAGCGCAGCAGCATCCCTGGGCACCATCTTGCTCTGGAATG TTGAGGAGGGACTCACACAGGTACACAATCATAACCCTCACCTTGTAGCA CCATTATGAATTTGTTTCTCTCTGCTGGGCTGCAACCCTAACCCCAACAC TAATCCCAAGCCCAGCTTAGGTAGATTAACTGTATGAGGTGGTTTAGCAT GGTCTGTGTGCTGCTCGGGGTTGTTTTTCTGTGCCACAGTAAAGAGCCAC AGTAAGAGCCACAATTCAGGGCCAGATCCCTTCCGTTTTTGCTCTCGCTG CGCTTTCTGCCGTTGTCTTGCACTGCCTCACTGCCGGTGGGACTTGTTCT CCCTTTTGTGGAGTGCGATGTAACTGCCGGCATGCAGACTCCCCCCCCCC CTCCCCCACCGTCCCTATTACCTCTCATGAGTGCGATCCCGAGTGCTTGC CCTCTCCTCTTCCTTGCCCATAACCCTAACCCTAACCCTCGACCTCGCCC TCGCCCTATATAGCTCTAAGCCCAATAACCCTCACCTTGGCATTCAGATC GACAAGTTCCTGTACTCCAGCGAGGATTACATCAAGGCCGGGGCGGTTCT GGCCATGGGTATCGTGAGCAGGTGCAGATGGGGGGGGAGAGAGAGAGACT GTGGAAGCTACTTGGGATATGCACTTGAACCCCTTCTTTGCCACCTACAG TTACAGTTGCATTTACAGTTACAGTTACACTACCCCCTCCCCCAGTCCTC AGTTAGAAAATGCTCACCCTTTGCTTTTCTCTTTATTGTCCCCACCTTCC TGCCCTACACGTCGTCTTTGTTTTTGTGACAACCTTCTTTCACCCTGCCA AGCCGCCTCTCACTCTTGAACCAATCAGAACTTCAACCACTCAGACACTC GTAGGACTGCCATAAGCACGATGTTTTCCTGAGTCTCAAAACTCATACTA ACCCCATATTTGCCACCGCCCTGGTACTCCCCCCACCACCCCCCCCAACC ATCCCCCACCTTCTCTACCCCCTCTGCCCCATCCCCACACCCCCTGTTTT CACCCCCACCACCGGAACTTGAAAAATATTCCCAACAAACATTGATCTAA AAATCAGCGATACAATAAAAAAAAAACACTAAAAAAGACTCTTAAGAATA AAAACGAAAAAAACGAAAAAAAAAACAGTGGTGTTCGTGACGAGAGCGAC CCGGCGCTGGCCCTCCTGTCGGACCACGTGGAGTCCCCCTCCCACTCCAT GCGCTGCGGGGCGTACGTGGGGCTAGGCATTGCCTATGCTGGCGCGAGGA GGGGGGATGTGGAGGAGCTCCTCACCCCGCTGGTGGCCAACACCGAGAGT GCTAACATGGTGGAGGTGTGCTTCACATGTCTACATGCATTTTGAGTCTT TTTGACGCAGCTTGGCATCTCCGGGTGAAGCTCTGGGCTTGACTCTAGGC ATGGCTCTGGGCATGGCTCTGGGCATGGCTCTGGGCATGGCTCCGGGTGT ATGGAGAGAGAGATAGGACTGCATGTCCTGTGATTTTTTTGATGGCCCTA ATTCTTGGGTGCATGTCTGCGGCACCTCTGTTTTGTGTGTGTGCGTGTGT GGGTGGGCGTGCTGTTCTTGCGTGCGCTTACTTCCTTTCCTTCCTTTGCT GAGAAAAGTCTTCCCTTACAGCTCTATCCCTATGTATCACTATCCCCTGG AAAAAAATATAAGGTGGGTCTCGCGGCCCTCTCACTGGGCATGATCTTTG TGGGCACCTGCAACGAGGGGGTGGGGACTGTGCTGGTGCAGCGGCTGATG GAGAGCACCGACACTGAGCTTGAGCAACCCATGGCGAGGCTTGTGTCACT GGGGCTGGGGCTGCTCTTCCTGGGCAAGAATGAGAAGGCGGATGCCATGA TGGAG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10506:381..2335+

>mRNA_D-mesarthrocarpus_Contig10506.1.1 ID=mRNA_D-mesarthrocarpus_Contig10506.1.1|Name=mRNA_D-mesarthrocarpus_Contig10506.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=567bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10506:381..2335+ (Discosporangium mesarthrocarpum MT17_79)
ATGACAACTGAGGGCAACTCTTGGCTGTACAAGAACAAAGACCACGGGAT
GATGAGCGCAGCAGCATCCCTGGGCACCATCTTGCTCTGGAATGTTGAGG
AGGGACTCACACAGATCGACAAGTTCCTGTACTCCAGCGAGGATTACATC
AAGGCCGGGGCGGTTCTGGCCATGGGTATCGTGAGCAGTGGTGTTCGTGA
CGAGAGCGACCCGGCGCTGGCCCTCCTGTCGGACCACGTGGAGTCCCCCT
CCCACTCCATGCGCTGCGGGGCGTACGTGGGGCTAGGCATTGCCTATGCT
GGCGCGAGGAGGGGGGATGTGGAGGAGCTCCTCACCCCGCTGGTGGCCAA
CACCGAGAGTGCTAACATGGTGGAGGTGGGTCTCGCGGCCCTCTCACTGG
GCATGATCTTTGTGGGCACCTGCAACGAGGGGGTGGGGACTGTGCTGGTG
CAGCGGCTGATGGAGAGCACCGACACTGAGCTTGAGCAACCCATGGCGAG
GCTTGTGTCACTGGGGCTGGGGCTGCTCTTCCTGGGCAAGAATGAGAAGG
CGGATGCCATGATGGAG
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