mRNA_D-mesarthrocarpus_Contig10503.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10503.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10503.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10503.1.1 vs. uniprot
Match: A0A165BJT7_EXIGL (Uncharacterized protein (Fragment) n=2 Tax=Exidia glandulosa HHB12029 TaxID=1314781 RepID=A0A165BJT7_EXIGL)

HSP 1 Score: 222 bits (566), Expect = 2.110e-57
Identity = 199/621 (32.05%), Postives = 303/621 (48.79%), Query Frame = 1
Query:    1 NGVAERRLAIIDEGARASLYSAGLGGKLWLWGEAYNMATYILNRTATASNNGKSPYLRLYGEVDPMYNIPPFGTPGFYQADPAHKLAP-RGGECTMLGVATDKPRGTFRVL-----DITTNQDVLDPMEDQEHHESGVGTEGDTGAPVGVDENDAPVGGPVAPTHILPLHQRR------------RTPTDDRPN---TITPPSAQ-ETEGGEGSQDSGTVNSGRNNDIVND-GKTGEDSEDPRMAGNPREMRKISDYLEPISISEACASPERSLWENAMSDEIAVCCKTMFGLNQLNPRKDVG*LTLSGC*SIK*INLVR-------VRYKARLVAKGFRQIQGLDYHDLFAPTP-FAVLRMIFALAASKNWELKHWDVKQAFTQADVEED--IYVRLCDG--CGDLSGKVVKLLKSLYRCRQSGRNFNILLVQVLSECG---FELCEADTCVLRLVVDGEARAIMTAHVDDLLIAGDLV-LLPVIKSGIQKYFEIEDLGDLKYCMGCGVHRDRAASTLTISHTGYVKEVCKRFNVEGAQELT-PYIPSRRLDGHGEDEACAE-----NTPYREAVGSLMWASLMTRIDISSMVREVAMYCKAYKRVHCSVVCFRIFEYIS 1728
            NGVAERR   + E  RA  + + L   +W  GEA   A Y++N   T++  GKSPY  L+ +   +  + PFG P +       KL   R  +   +GVA D   G FR+       +TT ++V +   +Q+  E+    EG+ G     D++D P           P    +            RTPT + P      TPP+   + E G  +++     S R  +I++  G T     DPR+          +D LEP ++SEA   P+ +LWE A+ +E+A        L+ +   + V     +     K +   +       VR+KARLVA+GF Q+ G+DY D FAP    A +R++ A+AA  + EL   D+K A+    + +D  +Y+R   G      +GKV +LLK+LY  +QSGR +   LV++L  CG   F   E D  V   VV G    I+  HVDD  IA   V L+   K+ ++K+ EI DLG+L + +G  V RDR A TL +S   Y++ + +R+N+E  + ++ P  P+ RL       + +E     + PY EAVGSLM+A L TR DIS  V  +  + +     H + V  R+F+Y+ 
Sbjct:  430 NGVAERRNRTLLEKIRAMRFDSKLPQNIW--GEAMMHAAYLINIQPTSALGGKSPYHALHNKPADVSELLPFGAPVWVHTGKGSKLGEGRVIKGRFVGVADDTADG-FRIYWQDKKSVTTERNVYE--REQDAREAAARFEGEQGW----DKDDPPAASQATHPVAEPSRDEKKENGRGDPPAATRTPTQNAPRWQTRATPPTELIDVEAGRPTRERKA--SRRVQEILDGLGMTSARPSDPRLEYAFAAEMSDADALEPRTLSEAQRRPDWTLWEQAIREELAT-------LDAMGTWELVDAPAGANVVGSKWVFRAKKDATGSVVRHKARLVAQGFSQVPGVDYFDTFAPVAKLASIRIVLAMAARLDLELHQIDIKGAYLNGQLTDDEVVYMRQPPGFEAPGTAGKVCRLLKTLYGLKQSGRRWYQRLVEIL--CGKLAFTRSEVDQAVFFKVVRGGQLVIVVVHVDDCTIAASTVQLVREFKNDVRKHVEITDLGELHWLLGIEVRRDRDAKTLALSQKSYIESILRRYNLEDVKPVSIPMDPNTRLSSADAPSSASEYALMRDKPYAEAVGSLMYAMLGTRPDISYAVTTLGRFSRNPGLPHWNAV-LRVFKYLK 1029          
BLAST of mRNA_D-mesarthrocarpus_Contig10503.1.1 vs. uniprot
Match: A0A6H5JQD0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQD0_9PHAE)

HSP 1 Score: 208 bits (529), Expect = 1.060e-56
Identity = 112/267 (41.95%), Postives = 163/267 (61.05%), Query Frame = 1
Query:  892 VRYKARLVAKGFRQIQGLDYHDLFAPTPFAVL-RMIFALAASKNWELKHWDVKQAFTQADVEEDIYVRLCDGCGDLSGKVVKLLKSLYRCRQSGRNFNILLVQVLSECGFELCEADTCVLRLVVDGEARAIMTAHVDDLLIAGDLVLLPVIKSGIQKYFEIEDLGDLKYCMGCGVHRDRAASTLTISHTGYVKEVCKRFNVEGAQELTPYIPSRRLDGHGEDEACAENTPYREAVGSLMWASLMTRIDISSMVREVAMYCKAYKRVH 1689
            V+ KARLVAKGF+Q  G+DY + F+PT  A   R++ ALA   N EL HWD++QAF Q++++ +++++L  GCG +SGKVV+L KSLY  +Q+ R F   LV  L   GFE   +D CVLR ++  E   ++  HVDD+L AG   L  V+ + +  +   + LG++++ +GC   RDR A T+ +S   Y++ V +RFNV     + P  P+       EDE  A + P+RE VGSLMW +  TR DIS+ VR VA +    K+ H
Sbjct:   44 VKAKARLVAKGFKQKYGVDYLETFSPTANAASHRLVVALACKYNLELLHWDIEQAFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYAGTTSLAEVVVAALGDFLPTKSLGEVRFFLGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSI-PASPTNDYRSVMEDEG-AGDVPFREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSH 308          
BLAST of mRNA_D-mesarthrocarpus_Contig10503.1.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE)

HSP 1 Score: 211 bits (538), Expect = 9.430e-54
Identity = 128/344 (37.21%), Postives = 186/344 (54.07%), Query Frame = 1
Query:  709 PISISEACASPERSLWENAMSDEI---------AVCCKTMFGLNQLNPR-------KDVG*LTLSGC*SIK*INLVRVRYKARLVAKGFRQIQGLDYHDLFAPTPFAVL-RMIFALAASKNWELKHWDVKQAFTQADVEEDIYVRLCDGCGDLSGKVVKLLKSLYRCRQSGRNFNILLVQVLSECGFELCEADTCVLRLVVDGEARAIMTAHVDDLLIAGDLVLLPVIKSGIQKYFEIEDLGDLKYCMGCGVHRDRAASTLTISHTGYVKEVCKRFNVEGAQELTPYIPSRRLDGHGEDEACAENTPYREAVGSLMWASLMTRIDISSMVREVAMYCKAYKRVH 1689
            P S  EA  S    +WE AMS E+          +  K   G N ++ R        + G +               V+ KARLVAKGF+Q  G+DY + F+PT  A   R++ ALA   N EL HWD++QAF Q++++ +++++L  GCG +SGKVV+L KSLY  +Q+ R F   LV  L   GFE   +D CVLR ++  E   ++  HVDD+L AG   L  V+ + +      ++LG++++ +GC   RDR A T+ +S   Y++ V +RFNV     + P  P+       EDE  A + P+RE VGSLMW +  TR DIS+ VR VA +    K+ H
Sbjct:  715 PDSYQEAQRSKYAKIWEGAMSAEVEGLIRAGTFTLAAKVPIGCNVIDARWVFKWKADETGKI---------------VKAKARLVAKGFKQKYGVDYLETFSPTANAASHRLVVALACKYNLELLHWDIEQAFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYAGTKSLAEVVVAALGDSLPTKNLGEVRFFLGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSI-PASPTNDYRSVMEDEG-AGDVPFREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSH 1041          
BLAST of mRNA_D-mesarthrocarpus_Contig10503.1.1 vs. uniprot
Match: A0A6H5JA97_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA97_9PHAE)

HSP 1 Score: 201 bits (512), Expect = 1.760e-53
Identity = 126/345 (36.52%), Postives = 183/345 (53.04%), Query Frame = 1
Query:  709 PISISEACASPERSLWENAMSDEIAVCCKTMFGLNQLNPRKDVG*LTLSGC*SIK*INLVRVRYKARLVAKGFRQIQGLDYHDLFAPT-PFAVLRMIFALAASKNWELKHWDVKQAFTQADVEEDIYVRLCDGCGDLSGKVVKLLKSLYRCRQSGRNFNILLVQVLSECGFELCEADTCVLRLVVDGEARAIMTAHVDDLLIAGDLVLLPVIKSGIQKYFEIEDLGDLKYCMGCGVHRDRAASTLTISHTGYVKEVCKRFNVEGAQELTPYIPSRRLDGHGEDEACAENTPYREAVGSLMWASLMTRIDISSMVREVAMYCKAYKRVHCSVVCFRIFEYISREGY 1740
            P S  EA AS  R LW +AM  E        FGL + +   + G  T               + KARLVA+G  Q + +D+ +L+APT   + +RM+ ALA   N +L H+D++QAF ++++EED+Y+RL  GCG L+G +VKL KSL+  RQ+ R ++ +L + L   GFE C AD CV RL+  G    I+  HVDD+   G+        + + K   +++LG+L++  GC   R +    LTIS   +  E+   + V G + + P     +L     DE  A + P+RE  GSLMW +  TR DI++ VR VA YC + KRVH       I  Y  R  Y
Sbjct:  131 PKSYKEAMASEYRHLWSDAMKREF-------FGLLEAD---EFGWAT---------------KVKARLVARGDMQREYIDFGELYAPTVSVSCVRMLAALACELNLDLCHFDIEQAFVRSELEEDVYMRLPQGCGALAGMIVKLGKSLHGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEGGCVVLILVVHVDDIFAVGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERSKETGRLTISQQTFTDELAAEYGVAGGKSV-PMSSGVKLSDFDADEE-ATDFPFRELGGSLMWLATQTRPDIANAVRAVARYCASPKRVHWDAA-MGILGYAMRTSY 447          
BLAST of mRNA_D-mesarthrocarpus_Contig10503.1.1 vs. uniprot
Match: A0A6H5KKK1_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK1_9PHAE)

HSP 1 Score: 209 bits (532), Expect = 2.350e-53
Identity = 127/344 (36.92%), Postives = 185/344 (53.78%), Query Frame = 1
Query:  709 PISISEACASPERSLWENAMSDEI---------AVCCKTMFGLNQLNPR-------KDVG*LTLSGC*SIK*INLVRVRYKARLVAKGFRQIQGLDYHDLFAPTPFAVL-RMIFALAASKNWELKHWDVKQAFTQADVEEDIYVRLCDGCGDLSGKVVKLLKSLYRCRQSGRNFNILLVQVLSECGFELCEADTCVLRLVVDGEARAIMTAHVDDLLIAGDLVLLPVIKSGIQKYFEIEDLGDLKYCMGCGVHRDRAASTLTISHTGYVKEVCKRFNVEGAQELTPYIPSRRLDGHGEDEACAENTPYREAVGSLMWASLMTRIDISSMVREVAMYCKAYKRVH 1689
            P S  EA  S    +WE AMS E+          +  K     N ++ R        + G +               V+ KARLVAKGF+Q  G+DY + F+PT  A   R++ ALA   N EL HWD++QAF Q++++ +++++L  GCG +SGKVV+L KSLY  +Q+ R F   LV  L   GFE   +D CVLR ++  E   ++  HVDD+L AG   L  V+ + +      ++LG++++ +GC   RDR A T+ +S   Y++ V +RFNV     + P  P+       EDE  A + P+RE VGSLMW +  TR DIS+ VR VA +    K+ H
Sbjct:  448 PDSYQEAQRSKYAKIWEGAMSAEVEGLIRAGTFTLAAKVPISCNVIDARWVFKWKADETGKI---------------VKAKARLVAKGFKQKYGVDYLETFSPTANAASHRLVVALACKYNLELLHWDIEQAFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYAGTKSLAEVVVAALGDSLPTKNLGEVRFFLGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSI-PASPTNDYRSVMEDEG-AGDVPFREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSH 774          
BLAST of mRNA_D-mesarthrocarpus_Contig10503.1.1 vs. uniprot
Match: A0A6H5J594_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J594_9PHAE)

HSP 1 Score: 209 bits (532), Expect = 2.570e-53
Identity = 185/637 (29.04%), Postives = 266/637 (41.76%), Query Frame = 1
Query:    1 NGVAERRLAIIDEGARASLYSAG-LGGKLWL------WGEAYNMATYILNRTATASN-NGKSPYLRLYGEVDPMYNIPPFGTPGFYQADPAHKLAPRGGECTMLGVATDKPRGTFRVLDITTNQDVLDPMEDQEHHESGVGTEGDTGAPVGVDENDAPVGGPVAPTHILPLHQRRRTPTDDRPNTITPPS------AQETEGGEGSQDSGTVNSGRNNDIVNDGKTG-------------EDSED---------------------PRMAGNPREMRKISDYL-------------------EPISISEACASPERSLWENAMSDEI---------AVCCKTMFGLNQLNPR-------KDVG*LTLSGC*SIK*INLVRVRYKARLVAKGFRQIQGLDYHDLFAPTPFAV-LRMIFALAASKNWELKHWDVKQAFTQADVEEDIYVRLCDGCGDLSGKVVKLLKSLYRCRQSGRNFNILLVQVLSECGFELCEADTCVLRLVVDGEARAIMTAHVDDLLIAGDLVLLPVIKSGIQKYFEIEDLGDLKYCMGCGVHRDRAASTLTISHTGYVKEVCKRFNVEGAQELTPYIPSRRLDGHGEDEACAENTPYREAVGSLMWASLMTRIDISSMVREVA 1659
            NGVAER L + +E A A+   A  L G + L      W EA + A   LN TA ++N + KSPY   YGE  P    P F  P + +     KL P+G  C  +G + D PR   RVL                                               T    + + R    +  P+ + PP         E EG E   D                                E+S D                     P  A  P+ +  ++D+                    EP S  EA  S   ++W+ AMS E+          +  K   G N ++ R        + G +               V+ KARLVAKGF+Q  G+DY + F+PT  A  +R++ ALA   N EL H D++QAF Q+ ++ +++++L  GC  +SGK+V+L KSLY  +Q+ R F   LV  L   GFE   +D CVLR ++  E   I+  HVDD+L AG   L  VI   +      ++LG++++ +GC   RDR A T+ IS   Y++ V +RFN+     + P  P+       EDE  A + P+RE VG LMW +  TR + S+ VR VA
Sbjct:  227 NGVAERGLGLTEEAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEALNHTACSANPDSKSPYEMWYGEARPARPYP-FLKPAYCKWQRPSKLLPKGESCFYVGPSRDHPRDCHRVL-----------------------------------------------TRAGTIQETRNVTWEALPSQLPPPQPPLPIEVAEEEGEESDDDVEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEESMDXXXXXXXXXXXXXXXVEVEASPPAARRPQHVVDLADFNTAARDAVELPKELIQDVEPEPGSYQEALRSKHATIWDKAMSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKI---------------VKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFVQSKLDHEVFMKLPPGCDSMSGKIVRLNKSLYGLKQASRTFYKRLVSDLLRIGFEQSLSDPCVLRFMMGDEVMGIIAIHVDDILYAGTKRLAEVIVEALGDSLPTKNLGEVRFFLGCAFSRDREAGTIEISQESYIRSVLERFNICRTSSI-PASPANDSRSVMEDEE-AGDVPFREVVGCLMWIANNTRPETSNAVRTVA 798          
BLAST of mRNA_D-mesarthrocarpus_Contig10503.1.1 vs. uniprot
Match: A0A6H5KGB0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGB0_9PHAE)

HSP 1 Score: 198 bits (504), Expect = 6.160e-53
Identity = 125/350 (35.71%), Postives = 185/350 (52.86%), Query Frame = 1
Query:  694 SDYLEPISISEACASPERSLWENAMSDEIAVCCKTMFGLNQLNPRKDVG*LTLSGC*SIK*INLVRVRYKARLVAKGFRQIQGLDYHDLFAPT-PFAVLRMIFALAASKNWELKHWDVKQAFTQADVEEDIYVRLCDGCGDLSGKVVKLLKSLYRCRQSGRNFNILLVQVLSECGFELCEADTCVLRLVVDGEARAIMTAHVDDLLIAGDLVLLPVIKSGIQKYFEIEDLGDLKYCMGCGVHRDRAASTLTISHTGYVKEVCKRFNVEGAQELTPYIPSRRLDGHGEDEACAENTPYREAVGSLMWASLMTRIDISSMVREVAMYCKAYKRVHCSVVCFRIFEYISREGY 1740
            SD   P +  EA  S    LW++A+  E        FGL   +   + G  T               ++KARLVA+G  Q   +D+ +LFAPT   + +R++ ALA  +N +L H+D++QAF Q+++EED+++RL  GCG LSG +VKL KSLY  +Q+ R ++  L + L   GF  C AD CV RL+ DG    I+  HVDD+   G         S + +   +++LG+L++   C   RD     L IS   + +E+   + VE  + + P   S +L    E+EACA+  P+RE VGSLMW +  TR DI++ VR VA YC +   VH       I  Y+ R  +
Sbjct:   34 SDLRVPKTFKEAMRSQHSELWDDAVGREF-------FGLLDAD---EYGWPT---------------KFKARLVARGDMQRASIDFGELFAPTVSVSSVRLLAALACEQNLDLCHFDIQQAFVQSELEEDVFMRLPQGCGRLSGLIVKLCKSLYGLKQASRQWHAHLTRCLLLLGFVQCLADACVFRLMEDGCVIMIIVVHVDDIFAVGQKERCDKFGSELNEMVPVKNLGELRWYSACFYQRDLERGLLRISQQRFAEELAAEYGVEWGKSV-PLPVSVKLTDFDENEACAD-VPFRELVGSLMWLTTRTRPDIANAVRPVARYCASPTMVHWKAA-LGILGYVRRTSW 355          
BLAST of mRNA_D-mesarthrocarpus_Contig10503.1.1 vs. uniprot
Match: A0A6H5JWG1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWG1_9PHAE)

HSP 1 Score: 202 bits (514), Expect = 6.980e-53
Identity = 117/334 (35.03%), Postives = 180/334 (53.89%), Query Frame = 1
Query:  691 ISDYLEPISISEACASPERSLWENAMSDEIAVCCKTMFGLNQLNPRKDVG*LTLSGC*SIK*INLVRVRYKARLVAKGFRQIQGLDYHDLFAPTP-FAVLRMIFALAASKNWELKHWDVKQAFTQADVEEDIYVRLCDGCGDLSGKVVKLLKSLYRCRQSGRNFNILLVQVLSECGFELCEADTCVLRLVVDGEARAIMTAHVDDLLIAGDLVLLPVIKSGIQKYFEIEDLGDLKYCMGCGVHRDRAASTLTISHTGYVKEVCKRFNVEGAQELTPYIPSRRLDGHGEDEACAENTPYREAVGSLMWASLMTRIDISSMVREVAMYCKAYKRVH 1689
            + D   P +  EA A P   +W NA   E        FGLN +   ++      +            VR KARLVA+GF Q +G+D+ + F+P P    +R++ A+A   +W+L H+D +QAF Q++++E +++RL  GCG LSGKVV+L +SLY  +Q+ R ++  L++ +   GFE C AD CV+RL+  G    ++  HVDD+   G           + +Y  I +LG+L++  GC   RD    T+TIS     +++  +F V   +E TP +   +L+ +  DE   +  P+R  VG LMW +  TR DI + VR VA Y  A KR+H
Sbjct:   79 VCDLETPETYGEAHAGPHHHIWTNAERKEF-------FGLNAVGTFEEGDEFGYA------------VRAKARLVARGFAQREGVDFFETFSPYPSITSIRLLAAIACVLDWDLCHFDAEQAFVQSELDEVVFIRLPPGCGALSGKVVRLRRSLYGLKQASRTWHHHLMRGMKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGLKSRCDQFGVDLNRYVPISNLGELRWYAGCRFSRDTVLGTVTISQQAVAEKIVAKFGVTTDKE-TPMVVGLKLEQYDADEPDVDE-PFRSLVGHLMWLANQTRPDILNAVRAVARYSHAPKRLH 391          
BLAST of mRNA_D-mesarthrocarpus_Contig10503.1.1 vs. uniprot
Match: A0A6H5KGK7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGK7_9PHAE)

HSP 1 Score: 202 bits (515), Expect = 1.210e-51
Identity = 117/334 (35.03%), Postives = 180/334 (53.89%), Query Frame = 1
Query:  691 ISDYLEPISISEACASPERSLWENAMSDEIAVCCKTMFGLNQLNPRKDVG*LTLSGC*SIK*INLVRVRYKARLVAKGFRQIQGLDYHDLFAPTP-FAVLRMIFALAASKNWELKHWDVKQAFTQADVEEDIYVRLCDGCGDLSGKVVKLLKSLYRCRQSGRNFNILLVQVLSECGFELCEADTCVLRLVVDGEARAIMTAHVDDLLIAGDLVLLPVIKSGIQKYFEIEDLGDLKYCMGCGVHRDRAASTLTISHTGYVKEVCKRFNVEGAQELTPYIPSRRLDGHGEDEACAENTPYREAVGSLMWASLMTRIDISSMVREVAMYCKAYKRVH 1689
            + D   P +  EA A P   +W NA   E        FGLN +   ++      +            VR KARLVA+GF Q +G+D+ + F+P P    +R++ A+A   +W+L H+D +QAF Q++++E +++RL  GCG LSGKVV+L +SLY  +Q+ R ++  L++ +   GFE C AD CV+RL+  G    ++  HVDD+   G           + +Y  I +LG+L++  GC   RD    T+TIS     +++  +F V   +E TP +   +L+ +  DE   +  P+R  VG LMW +  TR DI + VR VA Y  A KR+H
Sbjct:  303 VCDLETPETYGEAHAGPHHHIWTNAERKEF-------FGLNAVGTFEEGDEFGYA------------VRAKARLVARGFAQREGVDFFETFSPCPSITSIRLLAAIACVLDWDLCHFDAEQAFVQSELDEVVFIRLPPGCGALSGKVVRLRRSLYGLKQASRTWHHHLMRGMKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGLKSRCDQFGVDLNRYVPISNLGELRWYAGCRFSRDTVLGTVTISQQAVAEKIVAKFGVTTDKE-TPMVVGLKLEQYDADEPDVDE-PFRSLVGHLMWLANQTRPDILNAVRAVARYSHAPKRLH 615          
BLAST of mRNA_D-mesarthrocarpus_Contig10503.1.1 vs. uniprot
Match: A0A6H5JB16_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB16_9PHAE)

HSP 1 Score: 204 bits (520), Expect = 2.270e-51
Identity = 125/335 (37.31%), Postives = 181/335 (54.03%), Query Frame = 1
Query:  706 EPISISEACASPERSLWENAMSDEI---------AVCCKTMFGLNQLNPR-------KDVG*LTLSGC*SIK*INLVRVRYKARLVAKGFRQIQGLDYHDLFAPTPFAV-LRMIFALAASKNWELKHWDVKQAFTQADVEEDIYVRLCDGCGDLSGKVVKLLKSLYRCRQSGRNFNILLVQVLSECGFELCEADTCVLRLVVDGEARAIMTAHVDDLLIAGDLVLLPVIKSGIQKYFEIEDLGDLKYCMGCGVHRDRAASTLTISHTGYVKEVCKRFNVEGAQELTPYIPSRRLDGHGEDEACAENTPYREAVGSLMWASLMTRIDISSMVREVA 1659
            EP S  EA  S   ++W+ AMS E+          +  K   G N ++ R        + G +               V+ KARLVAKGFRQ  G+DY + F+PT  A  +R++ ALA   + EL HWD++QAF Q+ ++ +++++L  GCG +SGKVV+L KSLY  +Q+ R F   LV  L   GFE   +D CVLR ++  E   ++  HVDD+L AG   L  V+   +      ++LG++K+ +GC   RDR A T+ IS   Y++ V +RF +     + P  P+       EDE  A + P+RE VG LMW +  TR DIS+ VR VA
Sbjct:  779 EPGSYQEARQSKHAAIWDGAMSAEVEGLIRAGTFTLAVKIPIGCNVIDARWVFKWKADETGKI---------------VKAKARLVAKGFRQKYGVDYLETFSPTANAASIRLLVALACKYDLELLHWDIEQAFVQSKLDHEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSDLKRIGFEQSLSDPCVLRFMMGDEVLGMVAIHVDDILYAGTKSLAKVVVEALGDSLPTKNLGEVKFFLGCAFIRDREAGTIEISQESYIRSVLERFKICRTSSI-PASPANDNRSVMEDEE-AGDVPFREVVGCLMWVANGTRPDISNAVRAVA 1096          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10503.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A165BJT7_EXIGL2.110e-5732.05Uncharacterized protein (Fragment) n=2 Tax=Exidia ... [more]
A0A6H5JQD0_9PHAE1.060e-5641.95Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JRL9_9PHAE9.430e-5437.21Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JA97_9PHAE1.760e-5336.52Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KKK1_9PHAE2.350e-5336.92Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5J594_9PHAE2.570e-5329.04Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KGB0_9PHAE6.160e-5335.71Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JWG1_9PHAE6.980e-5335.03Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KGK7_9PHAE1.210e-5135.03Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JB16_9PHAE2.270e-5137.31Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10503contigD-mesarthrocarpus_Contig10503:1836..4280 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog164328.Phyra71619
Model size2188
Max annot lvl164328.Phyra71619|-
Hectar predicted targeting categoryother localisation
Exons3
Evalue7.37e-34
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,3QHW0@4776|Peronosporales
DescriptionReverse transcriptase (RNA-dependent DNA polymerase)
Cds size768
COG categoryL
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789187.299431-UTR-D-mesarthrocarpus_Contig10503:1835..21831680789187.299431-UTR-D-mesarthrocarpus_Contig10503:1835..2183Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10503 1836..2183 +
1680789187.3104534-UTR-D-mesarthrocarpus_Contig10503:2248..26061680789187.3104534-UTR-D-mesarthrocarpus_Contig10503:2248..2606Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10503 2249..2606 +
1680789187.3250422-UTR-D-mesarthrocarpus_Contig10503:2798..30821680789187.3250422-UTR-D-mesarthrocarpus_Contig10503:2798..3082Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10503 2799..3082 +
1680789187.3545654-UTR-D-mesarthrocarpus_Contig10503:3850..42801680789187.3545654-UTR-D-mesarthrocarpus_Contig10503:3850..4280Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10503 3851..4280 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789187.3386896-CDS-D-mesarthrocarpus_Contig10503:3082..38501680789187.3386896-CDS-D-mesarthrocarpus_Contig10503:3082..3850Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10503 3083..3850 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10503.1.1prot_D-mesarthrocarpus_Contig10503.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10503 3083..3850 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10503.1.1

>prot_D-mesarthrocarpus_Contig10503.1.1 ID=prot_D-mesarthrocarpus_Contig10503.1.1|Name=mRNA_D-mesarthrocarpus_Contig10503.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=256bp
MIFALAASKNWELKHWDVKQAFTQADVEEDIYVRLCDGCGDLSGKVVKLL
KSLYRCRQSGRNFNILLVQVLSECGFELCEADTCVLRLVVDGEARAIMTA
HVDDLLIAGDLVLLPVIKSGIQKYFEIEDLGDLKYCMGCGVHRDRAASTL
TISHTGYVKEVCKRFNVEGAQELTPYIPSRRLDGHGEDEACAENTPYREA
VGSLMWASLMTRIDISSMVREVAMYCKAYKRVHCSVVCFRIFEYISREGY
YFWRS*
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mRNA from alignment at D-mesarthrocarpus_Contig10503:1836..4280+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10503.1.1 ID=mRNA_D-mesarthrocarpus_Contig10503.1.1|Name=mRNA_D-mesarthrocarpus_Contig10503.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2445bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10503:1836..4280+ (Discosporangium mesarthrocarpum MT17_79)
AATGGTGTTGCGGAACGCCGACTTGCCATCATTGATGAAGGGGCACGGGC AAGTCTCTACTCTGCTGGCCTGGGTGGAAAACTGTGGTTATGGGGTGAGG CATACAACATGGCGACGTACATCCTGAACCGGACGGCTACTGCGAGCAAC AATGGAAAATCACCCTACCTACGGTTATATGGGGAAGTGGACCCCATGTA CAACATCCCTCCATTTGGAACCCCGGGTTTCTACCAAGCTGACCCAGCTC ACAAACTCGCCCCTCGGGGGGGTGAGTGCACAATGCTGGGGGTGGCCACT GACAAACCGAGGGGGACTTTCAGAGTGCTGGATATCACTACGAACCAGGT TCTCCTAAGGAACGCATTAAATGGCACCCCTGCAAAGAGGGAAAATGCCT GTTCCCAATAAAGGACGTCCTTGATCCCATGGAGGACCAAGAACATCATG AGAGTGGGGTCGGCACCGAGGGGGACACTGGGGCCCCAGTCGGTGTCGAC GAGAATGATGCGCCTGTCGGGGGCCCTGTAGCCCCCACACACATTCTCCC CCTCCACCAACGGCGAAGGACACCGACGGATGACCGGCCCAACACCATCA CACCCCCTTCAGCACAGGAGACGGAGGGAGGCGAAGGCTCGCAGGATTCC GGGACTGTCAATAGCGGCCGCAACAATGACATCGTTAACGACGGAAAAAC TGGAGAGGACTCAGAGGACCCGAGGATGGCAGGAAACCCACGCGAGATGC GGAAGATCAGCGATTATCTCGGTGGTGGAAGCGGCAAAAACTTGTTGCCC ACGCGCACCAGATCAGGTGCCACTAGGATTGATGATGAGGGGCGTTCTAT GTTTGGACTTGGTGCTTTTTTTTTGAGAGATGTGTCTGCGGCCATTAATA CCACTATCCTTGCTTGTTCAAGTCGTGCAATGCCAAGAGAGCTAGCAAAT CAGCTCCCAAAAGAACCTATTAGTATCAGTGAAGCATGTGCGTCCCCAGA ACGTAGTTTGTGGGAAAATGCAATGTCTGATGAGATTGCGGTCTGTTGCA AAACAATGTTTGGACTGAACCAGTTAAACCCCCGCAAGGACGTAGGGTGA TTGACACTAAGTGGGTGTTGAAGCATAAAGTGAATCAATTTGGTGAGGGT ACGATACAAGGCAAGATTAGTGGCAAAGGGTTTCAGGCAAATTCAAGGGC TGGATTACCATGATCTGTTTGCTCCAACTCCTTTTGCTGTACTACGTATG ATTTTTGCATTGGCTGCATCCAAGAATTGGGAGTTGAAGCATTGGGATGT AAAACAAGCATTCACACAAGCAGATGTGGAGGAGGATATTTATGTACGTC TGTGTGATGGGTGTGGGGATTTGTCTGGTAAAGTAGTGAAACTGCTCAAG TCATTATATCGCTGTCGACAGAGTGGGCGCAACTTCAACATATTGTTGGT ACAAGTATTGTCAGAGTGTGGATTTGAGTTGTGTGAGGCTGATACTTGTG TACTGCGACTAGTTGTCGATGGGGAAGCACGCGCTATAATGACAGCCCAT GTTGATGATTTGTTGATTGCCGGGGATTTGGTGTTGTTGCCGGTAATTAA ATCTGGGATACAAAAGTATTTTGAGATTGAGGATCTTGGAGATCTGAAAT ACTGCATGGGGTGTGGAGTTCACAGGGACAGGGCAGCTAGTACTCTAACC ATTAGCCATACAGGGTACGTAAAGGAAGTCTGCAAGCGTTTCAATGTGGA AGGGGCGCAGGAATTGACACCGTACATCCCATCACGGCGACTGGACGGCC ATGGTGAGGACGAGGCTTGTGCAGAGAACACACCGTACAGGGAGGCAGTA GGAAGCTTGATGTGGGCGAGCTTGATGACCAGGATCGACATCTCAAGCAT GGTGCGGGAGGTGGCCATGTACTGCAAAGCGTACAAGCGTGTGCACTGCA GTGTTGTCTGTTTTAGGATATTTGAATACATTTCCAGAGAGGGGTATTAC TTTTGGAGGTCCTGATGCAGTTTGTGAGTTGAGTGCCTATGCTGATGCCA GTTATGGGCCGTACATTGGGGATAAGAGATCTGTGACCGGTGGAATAGTG ATGTTCTATAGTGGGGCCATATCCTGGATGTCAAAAACTGAGAGAGTTGT GGCCCAATCCACCACTGAGAGTGGGTATATTGCTCTAAGTGCTTTAGGTC AGGAGATTTTATTTTTGAGAAATGTGTGGGAATTCATTCAGCCTTCTTTG CCTAGGCACCAGGTTATTATTTTTGAGGACAATGATGGAGCTGCAAAACT GGATCACAATTCAACCAGTGCTTCACGCTCACGCACAAAGCACATTGATA TTAGACACCATTTCCTGAGAAACTTGCAGAGAAATAGGGAGATCAATGTG TGCCGTGTTGGGACAGCAGACCAACATGCTGACCCTCTGACCAAG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10503:1836..4280+

>mRNA_D-mesarthrocarpus_Contig10503.1.1 ID=mRNA_D-mesarthrocarpus_Contig10503.1.1|Name=mRNA_D-mesarthrocarpus_Contig10503.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=768bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10503:1836..4280+ (Discosporangium mesarthrocarpum MT17_79)
ATGATTTTTGCATTGGCTGCATCCAAGAATTGGGAGTTGAAGCATTGGGA
TGTAAAACAAGCATTCACACAAGCAGATGTGGAGGAGGATATTTATGTAC
GTCTGTGTGATGGGTGTGGGGATTTGTCTGGTAAAGTAGTGAAACTGCTC
AAGTCATTATATCGCTGTCGACAGAGTGGGCGCAACTTCAACATATTGTT
GGTACAAGTATTGTCAGAGTGTGGATTTGAGTTGTGTGAGGCTGATACTT
GTGTACTGCGACTAGTTGTCGATGGGGAAGCACGCGCTATAATGACAGCC
CATGTTGATGATTTGTTGATTGCCGGGGATTTGGTGTTGTTGCCGGTAAT
TAAATCTGGGATACAAAAGTATTTTGAGATTGAGGATCTTGGAGATCTGA
AATACTGCATGGGGTGTGGAGTTCACAGGGACAGGGCAGCTAGTACTCTA
ACCATTAGCCATACAGGGTACGTAAAGGAAGTCTGCAAGCGTTTCAATGT
GGAAGGGGCGCAGGAATTGACACCGTACATCCCATCACGGCGACTGGACG
GCCATGGTGAGGACGAGGCTTGTGCAGAGAACACACCGTACAGGGAGGCA
GTAGGAAGCTTGATGTGGGCGAGCTTGATGACCAGGATCGACATCTCAAG
CATGGTGCGGGAGGTGGCCATGTACTGCAAAGCGTACAAGCGTGTGCACT
GCAGTGTTGTCTGTTTTAGGATATTTGAATACATTTCCAGAGAGGGGTAT
TACTTTTGGAGGTCCTGA
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