mRNA_D-mesarthrocarpus_Contig1050.8.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig1050.8.1
Unique NamemRNA_D-mesarthrocarpus_Contig1050.8.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1050.8.1 vs. uniprot
Match: D8LB53_ECTSI (Glutamine amidotransferase type-2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB53_ECTSI)

HSP 1 Score: 379 bits (974), Expect = 3.070e-129
Identity = 176/244 (72.13%), Postives = 198/244 (81.15%), Query Frame = 2
Query:   98 MCQLMGMQANNPTDFCFSFRGFRERGGRTDKHVDGWGVAFFEGRGCRCFIDLTPSAHSPIASLICTYPIKTQTVIAHVRLATQGRAHLQNVHPFTRELWGRYWVFAHNGDVPHGAWVGRKGSCGAALY--TKGERYTPVGDTDSEAAFCYFLNHLLKAYPDGPPSMADVYTTLRELWEGLCEQEGAIFNFLMGHNGDTLFAGCWSGARPGSSVWNSLYYTVREFPFSRCRLVDDDYEVDFTTVT 823
            MCQLMGMQAN PTDFCFSFRGFRERGGRT +HVDGWGVAFFEG+G R F D  PSA SPIA+LIC YPIKT+TVIAHVR+ATQG+  L+NVHPF+RELWG YW+FAHNGDVP       K     AL+  TK +RYTPVGDTDSEA FC+FLN LL A+P  PP+MADV+  L+ LW+ LC + G IFNFL+G  GDTLFAGCW GARPGS VWNSLYYTVREFPF+ C+L+DDD EVDF TVT
Sbjct:    1 MCQLMGMQANTPTDFCFSFRGFRERGGRTGRHVDGWGVAFFEGKGFRNFCDSLPSALSPIANLICNYPIKTRTVIAHVRMATQGKVRLENVHPFSRELWGSYWIFAHNGDVPSA-----KDPATRALFLQTKSKRYTPVGDTDSEAVFCFFLNRLLDAFPHAPPNMADVFVELKRLWKELCSESGVIFNFLLGQGGDTLFAGCWPGARPGSEVWNSLYYTVREFPFTTCQLIDDDCEVDFNTVT 239          
BLAST of mRNA_D-mesarthrocarpus_Contig1050.8.1 vs. uniprot
Match: A0A7S1J865_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J865_9EUGL)

HSP 1 Score: 280 bits (717), Expect = 3.480e-90
Identity = 140/256 (54.69%), Postives = 175/256 (68.36%), Query Frame = 2
Query:   98 MCQLMGMQANNPTDFCFSFRGFRERGGRTDKHVDGWGVAFFEGRGCRCFIDLTPSAHSPIASLICTYPIKTQTVIAHVRLATQGRAHLQNVHPFTRELWGRYWVFAHNGDVPHGAWVGRKGSCGAALYTKGERYTPVGDTDSEAAFCYFLNHLLKAYPDG-PPSMADVYTTLRELWEGLCE-QEGAIFNFLMGHNGDTLFAGCWSGARPGSSVWNSLYYTVREFPFSRCRLVDDDYEVDFTTVTNAKVSRALLTSK 859
            MCQL+GM  N PTDFCFSFRGF ER G TD H DGWGVAF+EGRG R F+D+ P+A SP+A L+  YPIKT  +I+H+R AT G   L NVHPF RELWG+YW FAHNGD+  G    R       L      Y  VGDTDSEAAF Y LN L+K YP+G PP+ AD+Y +++ L+  +CE +EG IFNFL+  +G  L  GCW G+RPGS+V+N L+Y VRE+PFS  +L D D  +DF+ VT      A++ +K
Sbjct:   15 MCQLLGMNCNTPTDFCFSFRGFAERAGHTDVHKDGWGVAFYEGRGLRSFLDVLPAASSPVAKLVRDYPIKTLNMISHIRYATCGSLDLHNVHPFNRELWGKYWTFAHNGDL--GPETRR------FLAKSVSPYRAVGDTDSEAAFVYILNELVKLYPNGTPPTTADLYLSVQSLFRQICEREEGCIFNFLL-CDGVDLIVGCWPGSRPGSTVYNGLHYIVREYPFSHAQLADCDCGIDFSEVTTPDDRVAVIATK 261          
BLAST of mRNA_D-mesarthrocarpus_Contig1050.8.1 vs. uniprot
Match: A0A7S3PDV2_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PDV2_9STRA)

HSP 1 Score: 251 bits (641), Expect = 1.350e-77
Identity = 129/258 (50.00%), Postives = 164/258 (63.57%), Query Frame = 2
Query:   98 MCQLMGMQANNPTDFCFSFRGFRERGGRTDKHVDGWGVAFFEGRGCRCFIDLTPSAHSPIASLICTYPIKTQTVIAHVRLATQGRAHLQNVHPFTRELWGRYWVFAHNGDVPHGAWVGRKGSCGAALYTKGE--RYTPVGDTDSEAAFCYFLNHLLKAYPDGPPSMADVYTTLRELWEGLCEQEG--AIFNFLMGHNGDTLFAGCWSGARPGSSVWNSLYYTVREFPFSRCRLVDDDYEVDFTTVTNAKVSRALLTSK 859
            MCQL+GM    PTDF FS +GF  RGG TDKH  GWG A +EGRG RCF D  P+  SPIA LI  Y I+T  ++AH+R ATQG   L+NVHPF+RELWG  W FAHNG+VP    V    +     +TK +   ++PVGDTDSEA FC  LN L   +P+G P++  ++  L  + E +        IFNFL+G    T+FA  W GARPGS VWN L+Y +RE PFS  +L+D DY +DF TVT  +   A++T+K
Sbjct:    1 MCQLLGMNCAAPTDFSFSLKGFCRRGGATDKHSHGWGTAIYEGRGLRCFHDTLPACKSPIAELIQNYSIRTYNMMAHIRYATQGEVSLENVHPFSRELWGIQWSFAHNGEVPMFTNVSAD-NVPLLGWTKCKDLHFSPVGDTDSEAVFCAILNALKAEFPEGLPTLPVLHEFLSYVCEEITHDHSNDTIFNFLLGCGQYTMFAYSWPGARPGSEVWNGLHYIIREPPFSTAKLLDVDYTIDFRTVTTPQDRVAVITTK 257          
BLAST of mRNA_D-mesarthrocarpus_Contig1050.8.1 vs. uniprot
Match: A0A7S1ZBM3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZBM3_TRICV)

HSP 1 Score: 248 bits (633), Expect = 2.930e-76
Identity = 132/276 (47.83%), Postives = 170/276 (61.59%), Query Frame = 2
Query:   38 WDSAILQFDTDPLGGEEGPNMCQLMGMQANNPTDFCFSFRGFRERGGRTDKHVDGWGVAFFEGRGCRCFIDLTPSAHSPIASLICTYPIKTQTVIAHVRLATQGRAHLQNVHPFTRELWGRYWVFAHNGDVPHGAWVGRKGSCGAALYTKGER-YTPVGDTDSEAAFCYFLNHLLKAYPDGPPSMADVYTTLRELWEGLCEQE-GAIFNFLMGHNGDTLFAGCWSGARPGSSVWNSLYYTVREFPFSRCRLVDDDYEVDFTTVTNAKVSRALLTSK 859
            W+ ++  F  +P        +CQL+GM    PTDF FSF+GF  RGG TD H DGWG+AF+EGRG RCF D    A SPIA  +  YP++T  +IAH+R AT G+  L+NVHPF RE+WG  W FAHNGDVP   + G +G+        GE+ Y PVGDTDSEA FC  LN  LKA  D  PS+  ++ TL  L + + + + G I NFL+G   +  FA    G+RPGS VWN LYYT+RE PF++  L D DY VDF+ V       A++ +K
Sbjct:   61 WERSLPSFLLEPSPSSTAL-LCQLLGMNCAEPTDFTFSFKGFAIRGGETDIHSDGWGIAFYEGRGLRCFHDPDACATSPIAEFVANYPLRTLNMIAHIRYATVGKTCLENVHPFQREMWGIQWCFAHNGDVP--LFKGTRGNLPWLGDVPGEKIYNPVGDTDSEAIFCAILN-ALKAKFDVLPSLPVLHQTLNCLCKEIVDTDRGTILNFLLGCGHNLQFAYSMPGSRPGSDVWNGLYYTIRETPFTKAHLSDCDYSVDFSEVNTEDDRVAVIATK 332          
BLAST of mRNA_D-mesarthrocarpus_Contig1050.8.1 vs. uniprot
Match: A0A7S2UCJ0_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UCJ0_9STRA)

HSP 1 Score: 249 bits (636), Expect = 1.880e-75
Identity = 129/258 (50.00%), Postives = 163/258 (63.18%), Query Frame = 2
Query:   98 MCQLMGMQANNPTDFCFSFRGFRERGGRTDKHVDGWGVAFFEGRGCRCFIDLTPSAHSPIASLICTYPIKTQTVIAHVRLATQGRAHLQNVHPFTRELWGRYWVFAHNGDVPHGAWVGRKGSCGAALYTKGER---YTPVGDTDSEAAFCYFLNHLLKAYPDGPPSMADVYTTLRELWEGLCE--QEGAIFNFLMGHNGDTLFAGCWSGARPGSSVWNSLYYTVREFPFSRCRLVDDDYEVDFTTVTNAKVSRALLTS 856
            MCQL+GM    PTDF FSFRGF +RGG TDKH  GWG+A +EGRG R F+D  P+A SP+A L+  YP+KT  ++AH+R ATQG  +L+NVHPF RE+WG  W FAHNG+VP   +V ++      L     R   Y PVGDTDSEA FC  LN L   +    P++  +Y T++     +    +E  I NFL+G    TLFA  W GARPGS VWN LYYT+R  PFS  +L D DY VDF+ VT  K   A++ +
Sbjct:    1 MCQLLGMNCATPTDFTFSFRGFAKRGGETDKHEHGWGLAVYEGRGLRTFLDPLPAAKSPVAELVERYPMKTLNMLAHIRYATQGGVNLENVHPFQREMWGIQWSFAHNGEVPK--YVNKECKDYPLLGRTNRRQTFYHPVGDTDSEATFCAILNGLRAEFTT-LPTLPVLYETIQRFCSEIVSDNEESTILNFLLGCGQYTLFAYSWPGARPGSQVWNGLYYTIRRPPFSTAKLTDVDYAVDFSQVTTPKDRVAVIAT 255          
BLAST of mRNA_D-mesarthrocarpus_Contig1050.8.1 vs. uniprot
Match: A0A1Z4RV91_9CHRO (Glutamine amidotransferase class-II n=1 Tax=Chondrocystis sp. NIES-4102 TaxID=2005460 RepID=A0A1Z4RV91_9CHRO)

HSP 1 Score: 240 bits (612), Expect = 4.740e-75
Identity = 123/253 (48.62%), Postives = 157/253 (62.06%), Query Frame = 2
Query:   98 MCQLMGMQANNPTDFCFSFRGFRERGGRTDKHVDGWGVAFFEGRGCRCFIDLTPSAHSPIASLICTYPIKTQTVIAHVRLATQGRAHLQNVHPFTRELWGRYWVFAHNGDVPHGAWVGRKGSCGAALYTKGERYTPVGDTDSEAAFCYFLNHLLKAYPDGPPSMADVYTTLRELWEGLCEQEGAIFNFLMGHNGDTLFAGCWSGARPGSSVWNSLYYTVREFPFSRCRLVDDDYEVDFTTVTNAKVSRALLTS 856
            MCQL+GM  N PTD CFSF GF  RGG+TD+H DGWG+AFFE  GCR F+D+ PS HSPIA L+  YPI +  VIAH+R AT G   L+N HPF RELWGRYWVFAHNGD+P+             L      Y PVG+TDSE AFC  L  L +A+PDG P++ D Y  L+E+ + L  +   IFN+LM  +G+ LFA C +           L Y VR+ PF+   L+D+D  V+F  +T  K   A++ +
Sbjct:    1 MCQLLGMNCNVPTDICFSFEGFCARGGKTDEHRDGWGIAFFENLGCRVFLDVQPSIHSPIADLVRRYPIHSTNVIAHIRKATIGSVSLENCHPFQRELWGRYWVFAHNGDLPN------------LLPESAGFYHPVGNTDSERAFCLILETLRQAFPDGKPALVDFYPLLKEITQQLASR--GIFNYLMS-DGEHLFAHCST----------KLNYIVRQAPFAAAHLIDEDVTVNFQELTTPKDRVAIIAT 228          
BLAST of mRNA_D-mesarthrocarpus_Contig1050.8.1 vs. uniprot
Match: UPI0019DB9EC1 (Class II glutamine amidotransferase n=1 Tax=Pleurocapsales cyanobacterium LEGE 06147 TaxID=1828827 RepID=UPI0019DB9EC1)

HSP 1 Score: 239 bits (611), Expect = 9.240e-75
Identity = 123/254 (48.43%), Postives = 160/254 (62.99%), Query Frame = 2
Query:   98 MCQLMGMQANNPTDFCFSFRGFRERGGRTDKHVDGWGVAFFEGRGCRCFIDLTPSAHSPIASLICTYPIKTQTVIAHVRLATQGRAHLQNVHPFTRELWGRYWVFAHNGDVPHGAWVGRKGSCGAALYTKGERYTPVGDTDSEAAFCYFLNHLLKAYPDGPPSMADVYTTLRELW-EGLCEQEGAIFNFLMGHNGDTLFAGCWSGARPGSSVWNSLYYTVREFPFSRCRLVDDDYEVDFTTVTNAKVSRALLTS 856
            MCQL+GM  N PTD CFSF GF  RGG+TD+H DGWG+AFFEG GCR F+D T S+ SP+A L+  YPIK+  VIAH+R AT G   L+N HPF RELWGRYW+FAHNGD+P+              Y K + Y+PVG TDSE AFC  LN L +A+PDG P +  +Y+ L+E+  E +C+    IFN+L+  +G+  FA C +           L Y VR+ PF+   L+D D  VDF  +T      A++T+
Sbjct:    1 MCQLLGMNCNVPTDICFSFEGFSARGGKTDEHSDGWGIAFFEGVGCRIFLDETSSSISPVADLVKRYPIKSTHVIAHIRKATIGAVALENCHPFQRELWGRYWIFAHNGDLPN-------------FYPKAQFYSPVGQTDSERAFCLILNTLRQAFPDGKPPLEKLYSVLQEITNEIVCK---GIFNYLLS-DGEHFFAHCST----------KLCYIVRQAPFAAAHLIDADITVDFQELTTPSDRVAIITT 227          
BLAST of mRNA_D-mesarthrocarpus_Contig1050.8.1 vs. uniprot
Match: A0A6N6LCI7_9PROT (Class II glutamine amidotransferase n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A6N6LCI7_9PROT)

HSP 1 Score: 239 bits (611), Expect = 1.190e-74
Identity = 126/255 (49.41%), Postives = 157/255 (61.57%), Query Frame = 2
Query:   98 MCQLMGMQANNPTDFCFSFRGFRERGGRTDKHVDGWGVAFFEGRGCRCFIDLTPSAHSPIASLICTYPIKTQTVIAHVRLATQGRAHLQNVHPFTRELWGRYWVFAHNGDVPHGAWVGRKGSCGAALYTKGERYTPVGDTDSEAAFCYFLNHLLKAYPDGPPSMADVYTTLRELWEGLCEQEGAI--FNFLMGHNGDTLFAGCWSGARPGSSVWNSLYYTVREFPFSRCRLVDDDYEVDFTTVTNAKVSRALLTS 856
            MCQL+GM  N PTD CFSF GF+ RGG TD H DGWG+AFFEGRGCR F+D  PS  SP+A L+ +Y I++  VIAH+R AT G  +L+N HPF RELWG+YW+FAHNGD+   A               G R+ PVG TDSE AFC  LN L + YPD PP +A+++ TLR+L      + GA   FNFL+  NGDTLFA C S           L Y +R+ PF+   L D D  +DF  VT  K   A++ +
Sbjct:    1 MCQLLGMNCNVPTDICFSFTGFQARGGLTDIHQDGWGIAFFEGRGCRMFLDPRPSVESPVAELVRSYAIRSLNVIAHIRKATHGDINLENTHPFMRELWGQYWLFAHNGDLKTYA------------PPAGGRFRPVGTTDSERAFCQILNTLAERYPDAPPPVAELHETLRQL----ATEIGAFGEFNFLLS-NGDTLFAHCAS----------RLSYIIRQAPFAEAHLTDQDVTIDFNEVTTPKDRVAVIAT 228          
BLAST of mRNA_D-mesarthrocarpus_Contig1050.8.1 vs. uniprot
Match: A0A1Z5JC61_FISSO (Gamma-glutamyl hercynylcysteine S-oxide hydrolase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JC61_FISSO)

HSP 1 Score: 242 bits (618), Expect = 2.550e-74
Identity = 129/259 (49.81%), Postives = 159/259 (61.39%), Query Frame = 2
Query:   98 MCQLMGMQANNPTDFCFSFRGFRERGGRTDKHVDGWGVAFFEGRGCRCFIDLTPSAHSPIASLICTYPIKTQTVIAHVRLATQGRAHLQNVHPFTRELWGRYWVFAHNGDVPHGAWVGRKGSCGAALYTKGERYTPVGDTDSEAAFCYFLNHLLKAYPDGPPSMADVYTTLRELWEGLCEQ-----EGAIFNFLMGHNGDTLFAGCWSGARPGSSVWNSLYYTVREFPFSRCRLVDDDYEVDFTTVTNAKVSRALLTSK 859
            MCQL+GM    PTDF FS +GF +RGG+TDKH  G+G+A +EGRG RCF D  P+  SPIA L+  YPIKT  ++AH+R ATQG   L+NVHPF R   G    F HNGD P  A V       A   T+   Y PVGDTDSEA FC  LN L   +PDG PS+      L E    +C++     +  IFNFL+G    TLFA  W G RPGS VWN L+Y VRE PFS  +L+D DY +DF+TV   +   A++T+K
Sbjct:    1 MCQLLGMNCAAPTDFSFSLKGFCQRGGKTDKHSHGFGLAIYEGRGVRCFHDTLPACQSPIADLVQNYPIKTYNMMAHIRYATQGVVSLENVHPFVRVWKGITMSFCHNGDCPSFANV-HTDHFPALGMTRDRLYHPVGDTDSEAVFCAILNALHAEFPDGLPSLP----VLHEFLSDVCQEIVRGAQDTIFNFLLGCGPHTLFAYSWPGRRPGSDVWNGLHYIVREPPFSTAKLLDVDYTIDFSTVATEQDRVAVITTK 254          
BLAST of mRNA_D-mesarthrocarpus_Contig1050.8.1 vs. uniprot
Match: UPI00140836A3 (class II glutamine amidotransferase n=1 Tax=Aphanocapsa montana TaxID=327565 RepID=UPI00140836A3)

HSP 1 Score: 238 bits (606), Expect = 4.060e-74
Identity = 120/253 (47.43%), Postives = 157/253 (62.06%), Query Frame = 2
Query:   98 MCQLMGMQANNPTDFCFSFRGFRERGGRTDKHVDGWGVAFFEGRGCRCFIDLTPSAHSPIASLICTYPIKTQTVIAHVRLATQGRAHLQNVHPFTRELWGRYWVFAHNGDVPHGAWVGRKGSCGAALYTKGERYTPVGDTDSEAAFCYFLNHLLKAYPDGPPSMADVYTTLRELWEGLCEQEGAIFNFLMGHNGDTLFAGCWSGARPGSSVWNSLYYTVREFPFSRCRLVDDDYEVDFTTVTNAKVSRALLTS 856
            MCQL+GM  N PTD CFSF GF  RGG+TD+H DGWG+AFFEG GCR F+D  PS  SP+A+L+  YPIK++ VIAH+R AT G   L+N HPF RELWG YWVFAHNGD+PH            +    G  Y PVG TDSE AFC  LN L + +P G P + D+Y  L+++ + +  Q+  IFN+L+  +G+ LFA C +           L Y VR+ PF+   L+D+D  VDF  +T      A++ +
Sbjct:    1 MCQLLGMNCNVPTDICFSFEGFSARGGKTDEHKDGWGIAFFEGAGCRLFLDDAPSTTSPVAALLREYPIKSKNVIAHIRKATVGAVGLENCHPFQRELWGHYWVFAHNGDLPH-----------LSQQAPGF-YQPVGQTDSEQAFCQILNRLRQVFPLGKPDLPDLYPVLQDITQAIARQD--IFNYLLS-DGEHLFAHCST----------KLCYLVRQAPFAAAHLIDEDLTVDFQELTTPSDRVAIIAT 228          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1050.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB53_ECTSI3.070e-12972.13Glutamine amidotransferase type-2 domain-containin... [more]
A0A7S1J865_9EUGL3.480e-9054.69Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S3PDV2_9STRA1.350e-7750.00Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S1ZBM3_TRICV2.930e-7647.83Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2UCJ0_9STRA1.880e-7550.00Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A1Z4RV91_9CHRO4.740e-7548.62Glutamine amidotransferase class-II n=1 Tax=Chondr... [more]
UPI0019DB9EC19.240e-7548.43Class II glutamine amidotransferase n=1 Tax=Pleuro... [more]
A0A6N6LCI7_9PROT1.190e-7449.41Class II glutamine amidotransferase n=2 Tax=Proteo... [more]
A0A1Z5JC61_FISSO2.550e-7449.81Gamma-glutamyl hercynylcysteine S-oxide hydrolase ... [more]
UPI00140836A34.060e-7447.43class II glutamine amidotransferase n=1 Tax=Aphano... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1050contigD-mesarthrocarpus_Contig1050:21099..24548 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LB53
PFAMsGATase_4
Model size969
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons6
Evalue8.04e-131
EggNOG OGsCOG0121@1|root,2RXQT@2759|Eukaryota
Ec32 ortholog descriptionPutative glutamine amidotransferase type 2
Ec32 orthologEc-27_005170.1
DescriptionGlutamine amidotransferases class-II
Cds size795
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1050.8.1prot_D-mesarthrocarpus_Contig1050.8.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig1050 21196..24471 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789186.8949182-UTR-D-mesarthrocarpus_Contig1050:21098..211951680789186.8949182-UTR-D-mesarthrocarpus_Contig1050:21098..21195Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig1050 21099..21195 +
1680789186.9778686-UTR-D-mesarthrocarpus_Contig1050:24471..245481680789186.9778686-UTR-D-mesarthrocarpus_Contig1050:24471..24548Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig1050 24472..24548 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789186.9057982-CDS-D-mesarthrocarpus_Contig1050:21195..212191680789186.9057982-CDS-D-mesarthrocarpus_Contig1050:21195..21219Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1050 21196..21219 +
1680789186.9202056-CDS-D-mesarthrocarpus_Contig1050:21434..214501680789186.9202056-CDS-D-mesarthrocarpus_Contig1050:21434..21450Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1050 21435..21450 +
1680789186.9295814-CDS-D-mesarthrocarpus_Contig1050:21610..218721680789186.9295814-CDS-D-mesarthrocarpus_Contig1050:21610..21872Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1050 21611..21872 +
1680789186.9388456-CDS-D-mesarthrocarpus_Contig1050:22108..222841680789186.9388456-CDS-D-mesarthrocarpus_Contig1050:22108..22284Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1050 22109..22284 +
1680789186.9517446-CDS-D-mesarthrocarpus_Contig1050:22676..227961680789186.9517446-CDS-D-mesarthrocarpus_Contig1050:22676..22796Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1050 22677..22796 +
1680789186.9663324-CDS-D-mesarthrocarpus_Contig1050:24274..244711680789186.9663324-CDS-D-mesarthrocarpus_Contig1050:24274..24471Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1050 24275..24471 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig1050.8.1

>prot_D-mesarthrocarpus_Contig1050.8.1 ID=prot_D-mesarthrocarpus_Contig1050.8.1|Name=mRNA_D-mesarthrocarpus_Contig1050.8.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=265bp
MCQLMGMQANNPTDFCFSFRGFRERGGRTDKHVDGWGVAFFEGRGCRCFI
DLTPSAHSPIASLICTYPIKTQTVIAHVRLATQGRAHLQNVHPFTRELWG
RYWVFAHNGDVPHGAWVGRKGSCGAALYTKGERYTPVGDTDSEAAFCYFL
NHLLKAYPDGPPSMADVYTTLRELWEGLCEQEGAIFNFLMGHNGDTLFAG
CWSGARPGSSVWNSLYYTVREFPFSRCRLVDDDYEVDFTTVTNAKVSRAL
LTSKAFFSSRFMHM*
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mRNA from alignment at D-mesarthrocarpus_Contig1050:21099..24548+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig1050.8.1 ID=mRNA_D-mesarthrocarpus_Contig1050.8.1|Name=mRNA_D-mesarthrocarpus_Contig1050.8.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3450bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1050:21099..24548+ (Discosporangium mesarthrocarpum MT17_79)
CAAAAATACCAAACCATTTTTTTTCGAAAGTGGAAGGTGGGATTCTGCGA TTCTGCAGTTCGATACCGACCCTTTGGGTGGAGAGGAGGGACCAAATATG TGCCAGCTCATGGGCATGCAGGTGGGTTTCTTATTGGATGATACGTCCAA GAGCAGTCAGGGGGGTACGAGAAATGGGCGAACATGCTTTTTGGGGGGTT TTATAAGTCGTGTTGGTATTGGTAAATTTCGAGTGATTTTTGTCTTATGC AGGCACCAACTCCAACCTGATCTGTCCCTATCCCCTCTCTGCTACCCCTT CAATGCTCTCTACGGCACCCTGGACTTGTTCACCAGGCGAACAACCCAAC TGGTGAGTTGAATTGTCCACCCACGCAACGCCTCCCATTAGTCACTTTTC CCCACCAAGAGTCTTCTTGCTCAGTGCCATCAGAGGCAGCCCTTGCCAAG CACAGATATCTAGCTTTGGGGTACCCCGCCTAAACTCTGCAACACTCGTG CCCCACTTACAGATTTCTGCTTTTCCTTTAGAGGCTTTCGGGAACGCGGT GGTCGCACGGACAAACACGTCGACGGGTGGGGGGTTGCCTTCTTCGAGGG GAGGGGATGCCGGTGCTTCATCGATCTGACACCAAGTGCGCACAGTCCTA TCGCATCCCTGATCTGCACTTATCCCATAAAGACGCAGACGGTGATTGCT CACGTGCGGCTGGCCACTCAGGGGCGAGCACACCTGCAGAATGTCCATCC CTTCACCAGGGAGCTGTGGGGAAGGTAAACCTTACCCTTCTTAATAAACA CTGCTGGACTGATTTTAAACGTAGGGGTAACGTAGGTAGCTACGGTGTGA TCCTCGCGTGTGGACCACCTGTGCCCATCGGCAAGTGAGGTCCCCGTCCC CTGTAATGTAGGATCGATTTTAAAGCTGGTATGCCAACTTGGGACATGAA AGAACCCAGCAGTGAGCCCTGGCCCCTGCAACCCCGTGCGCTACCATGGT TTGGCTCAAGGTATTGGGTGTTTGCTCACAACGGGGATGTGCCCCACGGA GCATGGGTTGGACGAAAGGGGTCTTGTGGAGCTGCACTATACACCAAAGG CGAGAGGTACACACCAGTGGGAGATACGGACAGTGAGGCGGCCTTCTGCT ACTTTCTCAACCACCTCTTGAAGGCCTACCCGGATGGTGAGTGTTAGAGG AACATATGCGGGGGGCAGGGGGGAAGGCAAGGAAGGCCTTCATGCTTGGT CAAGGTGTCGAATTGGTGTACTGTGGGAATTTAAGTGGGATGATGGAAAT TTGACTGCTGTACTGTAATGACATTTGACTGGGGATACAGAGAGCTTTTC TTCAGTGGAGAATTAACGTAAGGACACCAGTTGGCCCCACCCTCACATGA AGTCCAATATGCTCATTCAAACATGCGCTGTCTTTATCAAGCACAAGTAT GAAACACAAACAGAAGAGCTCAGATGTATGCACATAAAACGTATAGTACA TACACGTGTGTTCACCTCGTTTTCCTCTGGCGCAACGTTTGGACTGCCCT TGTTGTCCTTAAATGTATGCCTGAACAGGGCCGCCTAGCATGGCAGATGT GTACACAACGCTTAGGGAGCTGTGGGAGGGCCTGTGTGAGCAGGAGGGGG CCATCTTCAACTTCTTGATGGGTCACAATGGAGACACGTTGTTTGCAGGT GAGTGGGAGGCAGTGTGAAGGCATCCATACCCATACCCATACATGTATAT ACAGTTCTGGAGCTCTACATGTGCATACACTTAAGGTTAAGGTGTATACA TGTACATTTTATTTGCATGTACAAGTCAAGGGGCAAGCTGTGGGCGGAAA AGGGAGAGCGAGTTGGGCAACAAGATACATTACATCACTGCTCTTATGCT CTTGTATATTTTAACAAGTCAGGATGTAGCAGCAGACAGGCCAGACTCTC CCTGGGTTAGCTGCCAAAACATGGAGAACATATCATTTGTCCAATTGCAG AGTGGTTGTGCCCCTGACCCTAACCCTGAGCAAGGGTGTATGAATACATG CATGAAGCATGAGGGAGTAAGAGTGATTGTGTCTCTTTCCTGAAGGGTTG AAACCATTAGAATGCCAGGTCACATGGAATTTATTTCTTAAAGAGCTTCA CAATAGAGGTCCTGGGCTAAGCTCTTGTCTTGAAATTTCTTAGAAAATCA AAGTGTTATTGAAGCCTGGCGCAGGTAGCAGCTGTCCCTGTGCTGGCAAT GCACATTGGTGTCTTAGACCTTACTAGTATGTGTGAAACTGTATACAACC CCTACACCAGTGCAATCTGGCCCAGCAACTGACCTGCCAAGCATGCTGTG CTGCAGTGCCAGGAGATACTCTGAGGGTTAGGGTCCCCCAATGTGGGATA TGGCTCCGAGGACTATCCATCTATGCACAGAAATCTATTTGCATGTTCCC GCCCATGCCGTCTCCTCTCTTGCCTGTCCCTTGGGTGCATCCTCACCCGT CCCTAACCCTTTTCTCCCTAACCCTTTCATCCCTAACCCCTTCATCCCTA ACCCTTTCATACCCATCCCCTTCATCCCTAACTCTAACCCTGACCCAATA GCCGTATTTCTACTACTAGTATTATTGTTGCTTCGTGCTAACCCTAACCC TAACCCTATAGCTGTGTTACTACTATTACTATTATTACGTCATACTAACC CTAGCCCTAACCCCAACCCTAACCCTAACCATATAGCTGTATTACTACTA CTACTATTATTACTTCATACTAACCCTAGCCCTAACCCCAACCCTAACCC TACGTAATTCTGCTTTGGAATCTTCCCCACCCTTACACCCCCACAACACC TAAAACACACAGGGGGACAGGAAGGGGCTGTGGTGGTGTTATGTGGGCTC TGGGCTCTGGGCTCTGGGCTCTGATTGCCTAGCTCAGAGCTGCTCGTTTG TGTGTTATCTTTTGTCGTCTTTTTGTATGGTGGTGCCACCCAGTGTTGCA TGGATCTATTCCTAACCCCTCTCTGCGTATGTCACCACCTCAAGGTTCAG GGTAAGCTCTATGTTGAGCCCCGCCTGCTTACCGTCTACTGTCCCTCTGT TCAGCTTTAACCCAGACACCAAGTCAGCCTGTTGACCTTGCCGCTTTCCG CACTAACTTTTGGTCTTGGTGATCAGGGTGCTGGTCTGGTGCTCGACCGG GGTCCTCTGTGTGGAATAGCCTGTACTATACAGTGAGGGAGTTTCCATTC TCTAGGTGCCGCCTTGTTGACGATGACTACGAGGTTGACTTCACCACAGT CACCAATGCAAAGGTCAGTAGGGCCTTGCTTACTTCGAAAGCTTTCTTTT CTTCAAGATTTATGCACATGTGAGCATACCTACCCTAGCCCTCATCCAAA CTCTAACCATGGGGTATAAGGTACAGTTGGTTTTATCTCAAGTGTGGAGT
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1050:21099..24548+

>mRNA_D-mesarthrocarpus_Contig1050.8.1 ID=mRNA_D-mesarthrocarpus_Contig1050.8.1|Name=mRNA_D-mesarthrocarpus_Contig1050.8.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=795bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1050:21099..24548+ (Discosporangium mesarthrocarpum MT17_79)
ATGTGCCAGCTCATGGGCATGCAGGCGAACAACCCAACTGATTTCTGCTT
TTCCTTTAGAGGCTTTCGGGAACGCGGTGGTCGCACGGACAAACACGTCG
ACGGGTGGGGGGTTGCCTTCTTCGAGGGGAGGGGATGCCGGTGCTTCATC
GATCTGACACCAAGTGCGCACAGTCCTATCGCATCCCTGATCTGCACTTA
TCCCATAAAGACGCAGACGGTGATTGCTCACGTGCGGCTGGCCACTCAGG
GGCGAGCACACCTGCAGAATGTCCATCCCTTCACCAGGGAGCTGTGGGGA
AGGTATTGGGTGTTTGCTCACAACGGGGATGTGCCCCACGGAGCATGGGT
TGGACGAAAGGGGTCTTGTGGAGCTGCACTATACACCAAAGGCGAGAGGT
ACACACCAGTGGGAGATACGGACAGTGAGGCGGCCTTCTGCTACTTTCTC
AACCACCTCTTGAAGGCCTACCCGGATGGGCCGCCTAGCATGGCAGATGT
GTACACAACGCTTAGGGAGCTGTGGGAGGGCCTGTGTGAGCAGGAGGGGG
CCATCTTCAACTTCTTGATGGGTCACAATGGAGACACGTTGTTTGCAGGG
TGCTGGTCTGGTGCTCGACCGGGGTCCTCTGTGTGGAATAGCCTGTACTA
TACAGTGAGGGAGTTTCCATTCTCTAGGTGCCGCCTTGTTGACGATGACT
ACGAGGTTGACTTCACCACAGTCACCAATGCAAAGGTCAGTAGGGCCTTG
CTTACTTCGAAAGCTTTCTTTTCTTCAAGATTTATGCACATGTGA
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