mRNA_D-mesarthrocarpus_Contig105.15.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig105.15.1 vs. uniprot
Match: A0A6H5JHM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHM5_9PHAE) HSP 1 Score: 99.4 bits (246), Expect = 7.610e-24 Identity = 45/63 (71.43%), Postives = 54/63 (85.71%), Query Frame = 1
Query: 4 AGLTGYFRRGLVDVKSALPFIAVSLPACYLGARLIPYADERFLKALYAVFMLGLSAYLFLEEE 192
+GL GYFRRGL+D SALPFI S+P+C LGA ++PYADER LKA+YAVFMLGLSAYL L+E+
Sbjct: 216 SGLLGYFRRGLIDPGSALPFILASIPSCLLGALVVPYADERVLKAIYAVFMLGLSAYLLLDEQ 278
BLAST of mRNA_D-mesarthrocarpus_Contig105.15.1 vs. uniprot
Match: D7FW33_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW33_ECTSI) HSP 1 Score: 99.8 bits (247), Expect = 4.110e-23 Identity = 45/63 (71.43%), Postives = 54/63 (85.71%), Query Frame = 1
Query: 4 AGLTGYFRRGLVDVKSALPFIAVSLPACYLGARLIPYADERFLKALYAVFMLGLSAYLFLEEE 192
+GL GYFRRGL+D SALPFI S+P+C LGA ++PYADER LKA+YAVFMLGLSAYL L+E+
Sbjct: 218 SGLLGYFRRGLIDPGSALPFILASIPSCLLGALIVPYADERVLKAIYAVFMLGLSAYLLLDEQ 280
BLAST of mRNA_D-mesarthrocarpus_Contig105.15.1 vs. uniprot
Match: A0A7S1Y9K8_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y9K8_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 1.050e-9 Identity = 30/66 (45.45%), Postives = 45/66 (68.18%), Query Frame = 1
Query: 4 AGLTGYFRRGLVDVKSALPFIAVSLPACYLGARLIPY--ADERFLKALYAVFMLGLSAYLFLEEEP 195
+GL+GY+RRGLVD ALPF+ VS+P+ +GA L ++ L+ +YA M+ L+A+L L E+P
Sbjct: 211 SGLSGYWRRGLVDWSVALPFLLVSVPSALIGALLESSIASNTTLLRGVYAALMISLAAFLLLSEKP 276
BLAST of mRNA_D-mesarthrocarpus_Contig105.15.1 vs. uniprot
Match: A0A7S1V5R0_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V5R0_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 1.220e-9 Identity = 30/66 (45.45%), Postives = 45/66 (68.18%), Query Frame = 1
Query: 4 AGLTGYFRRGLVDVKSALPFIAVSLPACYLGARLIPY--ADERFLKALYAVFMLGLSAYLFLEEEP 195
+GL+GY+RRGLVD ALPF+ VS+P+ +GA L ++ L+ +YA M+ L+A+L L E+P
Sbjct: 211 SGLSGYWRRGLVDWSVALPFLLVSVPSALIGALLESSIASNTTLLRGVYAALMISLAAFLLLSEKP 276
BLAST of mRNA_D-mesarthrocarpus_Contig105.15.1 vs. uniprot
Match: A0A7S0MPJ8_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0MPJ8_9CHLO) HSP 1 Score: 58.2 bits (139), Expect = 4.240e-9 Identity = 29/63 (46.03%), Postives = 35/63 (55.56%), Query Frame = 1
Query: 4 AGLTGYFRRGLVDVKSALPFIAVSLPACYLGARLIPYADERFLKALYAVFMLGLSAYLFLEEE 192
+GL GY R+GLVD K+A P+IAV P LG D L+ Y MLGLS L +EE
Sbjct: 74 SGLLGYIRKGLVDFKTAAPYIAVGAPVGLLGGVYCNVFDPSILRLAYGALMLGLSVLLVTQEE 136
BLAST of mRNA_D-mesarthrocarpus_Contig105.15.1 vs. uniprot
Match: A0A2E4XR81_9PROT (Probable membrane transporter protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4XR81_9PROT) HSP 1 Score: 58.9 bits (141), Expect = 1.190e-8 Identity = 26/63 (41.27%), Postives = 39/63 (61.90%), Query Frame = 1
Query: 4 AGLTGYFRRGLVDVKSALPFIAVSLPACYLGARLIPYADERFLKALYAVFMLGLSAYLFLEEE 192
+ GY+RR LVD +SALPF + +P +GA + AD+ LK +Y V MLGL+A + + +
Sbjct: 68 SAFVGYYRRRLVDFRSALPFATIGVPLGIIGALIANLADDLLLKGVYGVLMLGLAAVMLRKSD 130
BLAST of mRNA_D-mesarthrocarpus_Contig105.15.1 vs. uniprot
Match: A0A3M0ZY15_9PROT (Probable membrane transporter protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M0ZY15_9PROT) HSP 1 Score: 58.9 bits (141), Expect = 1.260e-8 Identity = 27/64 (42.19%), Postives = 36/64 (56.25%), Query Frame = 1
Query: 4 AGLTGYFRRGLVDVKSALPFIAVSLPACYLGARLIPYADERFLKALYAVFMLGLSAYLFLEEEP 195
+G GYFR+ L+D KSALPFIAVS+P GA + D +K Y ML L+ ++ P
Sbjct: 68 SGFVGYFRKRLIDFKSALPFIAVSVPVAIAGAFMTHLLDPAVIKGAYGTLMLFLAVVMYRHHAP 131
BLAST of mRNA_D-mesarthrocarpus_Contig105.15.1 vs. uniprot
Match: B7G5R6_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G5R6_PHATC) HSP 1 Score: 58.9 bits (141), Expect = 1.470e-8 Identity = 29/67 (43.28%), Postives = 42/67 (62.69%), Query Frame = 1
Query: 1 MAGLTGYFRRGLVDVKSALPFIAVSLPACYLGARLIPY--ADERFLKALYAVFMLGLSAYLFLEEEP 195
++GL+GY+RRGLVD A F+ ++LP + GA L P + FL+ LY+ ML L A+L E+P
Sbjct: 149 LSGLSGYWRRGLVDWGVAFKFLGLALPTSFAGALLEPSLAGETTFLRILYSTLMLTLCAFLLFSEKP 215
BLAST of mRNA_D-mesarthrocarpus_Contig105.15.1 vs. uniprot
Match: A0A2D6FYU0_9PROT (Probable membrane transporter protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D6FYU0_9PROT) HSP 1 Score: 54.7 bits (130), Expect = 4.300e-7 Identity = 29/66 (43.94%), Postives = 39/66 (59.09%), Query Frame = 1
Query: 4 AGLTGYFRRGLVDVKSALPFIAVSLPACYLGARLIPYADE--RFLKALYAVFMLGLSAYLFLEEEP 195
+G GYFR+ L+D KSA+PFIAV +P +GA L+ E L+ YA+ ML LS L +P
Sbjct: 73 SGFVGYFRKHLIDFKSAIPFIAVGVPIGIVGAILLTSFKEFEEVLRGAYALLMLILSLELIRHHDP 138
BLAST of mRNA_D-mesarthrocarpus_Contig105.15.1 vs. uniprot
Match: A0A2E6GLR0_9PROT (Probable membrane transporter protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6GLR0_9PROT) HSP 1 Score: 53.9 bits (128), Expect = 7.900e-7 Identity = 25/66 (37.88%), Postives = 39/66 (59.09%), Query Frame = 1
Query: 4 AGLTGYFRRGLVDVKSALPFIAVSLPACYLGARLIPYADER--FLKALYAVFMLGLSAYLFLEEEP 195
+G GY+R+ L+D +SA+PF+ S+P +GA L+ Y E+ FLK YA+ M+ L + P
Sbjct: 67 SGFIGYYRKRLIDFRSAIPFLFWSVPVAIIGAVLLGYLHEQDTFLKGAYAILMIVLCPIILRHTTP 132 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig105.15.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig105.15.1 >prot_D-mesarthrocarpus_Contig105.15.1 ID=prot_D-mesarthrocarpus_Contig105.15.1|Name=mRNA_D-mesarthrocarpus_Contig105.15.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=66bp MAGLTGYFRRGLVDVKSALPFIAVSLPACYLGARLIPYADERFLKALYAVback to top mRNA from alignment at D-mesarthrocarpus_Contig105:51905..52102- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig105.15.1 ID=mRNA_D-mesarthrocarpus_Contig105.15.1|Name=mRNA_D-mesarthrocarpus_Contig105.15.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=198bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig105:51905..52102- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig105:51905..52102- >mRNA_D-mesarthrocarpus_Contig105.15.1 ID=mRNA_D-mesarthrocarpus_Contig105.15.1|Name=mRNA_D-mesarthrocarpus_Contig105.15.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=198bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig105:51905..52102- (Discosporangium mesarthrocarpum MT17_79)back to top |