mRNA_D-mesarthrocarpus_Contig105.15.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig105.15.1
Unique NamemRNA_D-mesarthrocarpus_Contig105.15.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig105.15.1 vs. uniprot
Match: A0A6H5JHM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHM5_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 7.610e-24
Identity = 45/63 (71.43%), Postives = 54/63 (85.71%), Query Frame = 1
Query:    4 AGLTGYFRRGLVDVKSALPFIAVSLPACYLGARLIPYADERFLKALYAVFMLGLSAYLFLEEE 192
            +GL GYFRRGL+D  SALPFI  S+P+C LGA ++PYADER LKA+YAVFMLGLSAYL L+E+
Sbjct:  216 SGLLGYFRRGLIDPGSALPFILASIPSCLLGALVVPYADERVLKAIYAVFMLGLSAYLLLDEQ 278          
BLAST of mRNA_D-mesarthrocarpus_Contig105.15.1 vs. uniprot
Match: D7FW33_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW33_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 4.110e-23
Identity = 45/63 (71.43%), Postives = 54/63 (85.71%), Query Frame = 1
Query:    4 AGLTGYFRRGLVDVKSALPFIAVSLPACYLGARLIPYADERFLKALYAVFMLGLSAYLFLEEE 192
            +GL GYFRRGL+D  SALPFI  S+P+C LGA ++PYADER LKA+YAVFMLGLSAYL L+E+
Sbjct:  218 SGLLGYFRRGLIDPGSALPFILASIPSCLLGALIVPYADERVLKAIYAVFMLGLSAYLLLDEQ 280          
BLAST of mRNA_D-mesarthrocarpus_Contig105.15.1 vs. uniprot
Match: A0A7S1Y9K8_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y9K8_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 1.050e-9
Identity = 30/66 (45.45%), Postives = 45/66 (68.18%), Query Frame = 1
Query:    4 AGLTGYFRRGLVDVKSALPFIAVSLPACYLGARLIPY--ADERFLKALYAVFMLGLSAYLFLEEEP 195
            +GL+GY+RRGLVD   ALPF+ VS+P+  +GA L     ++   L+ +YA  M+ L+A+L L E+P
Sbjct:  211 SGLSGYWRRGLVDWSVALPFLLVSVPSALIGALLESSIASNTTLLRGVYAALMISLAAFLLLSEKP 276          
BLAST of mRNA_D-mesarthrocarpus_Contig105.15.1 vs. uniprot
Match: A0A7S1V5R0_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V5R0_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 1.220e-9
Identity = 30/66 (45.45%), Postives = 45/66 (68.18%), Query Frame = 1
Query:    4 AGLTGYFRRGLVDVKSALPFIAVSLPACYLGARLIPY--ADERFLKALYAVFMLGLSAYLFLEEEP 195
            +GL+GY+RRGLVD   ALPF+ VS+P+  +GA L     ++   L+ +YA  M+ L+A+L L E+P
Sbjct:  211 SGLSGYWRRGLVDWSVALPFLLVSVPSALIGALLESSIASNTTLLRGVYAALMISLAAFLLLSEKP 276          
BLAST of mRNA_D-mesarthrocarpus_Contig105.15.1 vs. uniprot
Match: A0A7S0MPJ8_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0MPJ8_9CHLO)

HSP 1 Score: 58.2 bits (139), Expect = 4.240e-9
Identity = 29/63 (46.03%), Postives = 35/63 (55.56%), Query Frame = 1
Query:    4 AGLTGYFRRGLVDVKSALPFIAVSLPACYLGARLIPYADERFLKALYAVFMLGLSAYLFLEEE 192
            +GL GY R+GLVD K+A P+IAV  P   LG       D   L+  Y   MLGLS  L  +EE
Sbjct:   74 SGLLGYIRKGLVDFKTAAPYIAVGAPVGLLGGVYCNVFDPSILRLAYGALMLGLSVLLVTQEE 136          
BLAST of mRNA_D-mesarthrocarpus_Contig105.15.1 vs. uniprot
Match: A0A2E4XR81_9PROT (Probable membrane transporter protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4XR81_9PROT)

HSP 1 Score: 58.9 bits (141), Expect = 1.190e-8
Identity = 26/63 (41.27%), Postives = 39/63 (61.90%), Query Frame = 1
Query:    4 AGLTGYFRRGLVDVKSALPFIAVSLPACYLGARLIPYADERFLKALYAVFMLGLSAYLFLEEE 192
            +   GY+RR LVD +SALPF  + +P   +GA +   AD+  LK +Y V MLGL+A +  + +
Sbjct:   68 SAFVGYYRRRLVDFRSALPFATIGVPLGIIGALIANLADDLLLKGVYGVLMLGLAAVMLRKSD 130          
BLAST of mRNA_D-mesarthrocarpus_Contig105.15.1 vs. uniprot
Match: A0A3M0ZY15_9PROT (Probable membrane transporter protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M0ZY15_9PROT)

HSP 1 Score: 58.9 bits (141), Expect = 1.260e-8
Identity = 27/64 (42.19%), Postives = 36/64 (56.25%), Query Frame = 1
Query:    4 AGLTGYFRRGLVDVKSALPFIAVSLPACYLGARLIPYADERFLKALYAVFMLGLSAYLFLEEEP 195
            +G  GYFR+ L+D KSALPFIAVS+P    GA +    D   +K  Y   ML L+  ++    P
Sbjct:   68 SGFVGYFRKRLIDFKSALPFIAVSVPVAIAGAFMTHLLDPAVIKGAYGTLMLFLAVVMYRHHAP 131          
BLAST of mRNA_D-mesarthrocarpus_Contig105.15.1 vs. uniprot
Match: B7G5R6_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G5R6_PHATC)

HSP 1 Score: 58.9 bits (141), Expect = 1.470e-8
Identity = 29/67 (43.28%), Postives = 42/67 (62.69%), Query Frame = 1
Query:    1 MAGLTGYFRRGLVDVKSALPFIAVSLPACYLGARLIPY--ADERFLKALYAVFMLGLSAYLFLEEEP 195
            ++GL+GY+RRGLVD   A  F+ ++LP  + GA L P    +  FL+ LY+  ML L A+L   E+P
Sbjct:  149 LSGLSGYWRRGLVDWGVAFKFLGLALPTSFAGALLEPSLAGETTFLRILYSTLMLTLCAFLLFSEKP 215          
BLAST of mRNA_D-mesarthrocarpus_Contig105.15.1 vs. uniprot
Match: A0A2D6FYU0_9PROT (Probable membrane transporter protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D6FYU0_9PROT)

HSP 1 Score: 54.7 bits (130), Expect = 4.300e-7
Identity = 29/66 (43.94%), Postives = 39/66 (59.09%), Query Frame = 1
Query:    4 AGLTGYFRRGLVDVKSALPFIAVSLPACYLGARLIPYADE--RFLKALYAVFMLGLSAYLFLEEEP 195
            +G  GYFR+ L+D KSA+PFIAV +P   +GA L+    E    L+  YA+ ML LS  L    +P
Sbjct:   73 SGFVGYFRKHLIDFKSAIPFIAVGVPIGIVGAILLTSFKEFEEVLRGAYALLMLILSLELIRHHDP 138          
BLAST of mRNA_D-mesarthrocarpus_Contig105.15.1 vs. uniprot
Match: A0A2E6GLR0_9PROT (Probable membrane transporter protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6GLR0_9PROT)

HSP 1 Score: 53.9 bits (128), Expect = 7.900e-7
Identity = 25/66 (37.88%), Postives = 39/66 (59.09%), Query Frame = 1
Query:    4 AGLTGYFRRGLVDVKSALPFIAVSLPACYLGARLIPYADER--FLKALYAVFMLGLSAYLFLEEEP 195
            +G  GY+R+ L+D +SA+PF+  S+P   +GA L+ Y  E+  FLK  YA+ M+ L   +     P
Sbjct:   67 SGFIGYYRKRLIDFRSAIPFLFWSVPVAIIGAVLLGYLHEQDTFLKGAYAILMIVLCPIILRHTTP 132          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig105.15.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A6H5JHM5_9PHAE7.610e-2471.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FW33_ECTSI4.110e-2371.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1Y9K8_9STRA1.050e-945.45Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S1V5R0_9STRA1.220e-945.45Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S0MPJ8_9CHLO4.240e-946.03Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
A0A2E4XR81_9PROT1.190e-841.27Probable membrane transporter protein n=1 Tax=Rhod... [more]
A0A3M0ZY15_9PROT1.260e-842.19Probable membrane transporter protein n=1 Tax=Alph... [more]
B7G5R6_PHATC1.470e-843.28Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A2D6FYU0_9PROT4.300e-743.94Probable membrane transporter protein n=1 Tax=Rhod... [more]
A0A2E6GLR0_9PROT7.900e-737.88Probable membrane transporter protein n=1 Tax=Rhod... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig105contigD-mesarthrocarpus_Contig105:51905..52102 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FW33
PFAMsTauE
Model size198
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.74e-24
EggNOG OGs2CY1Q@1|root,2S1CE@2759|Eukaryota
DescriptionSulfite exporter TauE/SafE
Cds size198
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789186.6137826-CDS-D-mesarthrocarpus_Contig105:51904..521021680789186.6137826-CDS-D-mesarthrocarpus_Contig105:51904..52102Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig105 51905..52102 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig105.15.1prot_D-mesarthrocarpus_Contig105.15.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig105 51905..52102 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig105.15.1

>prot_D-mesarthrocarpus_Contig105.15.1 ID=prot_D-mesarthrocarpus_Contig105.15.1|Name=mRNA_D-mesarthrocarpus_Contig105.15.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=66bp
MAGLTGYFRRGLVDVKSALPFIAVSLPACYLGARLIPYADERFLKALYAV
FMLGLSAYLFLEEEP*
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mRNA from alignment at D-mesarthrocarpus_Contig105:51905..52102-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig105.15.1 ID=mRNA_D-mesarthrocarpus_Contig105.15.1|Name=mRNA_D-mesarthrocarpus_Contig105.15.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=198bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig105:51905..52102- (Discosporangium mesarthrocarpum MT17_79)
ATGGCAGGGTTGACTGGCTACTTCCGGAGGGGTCTGGTGGATGTCAAGTC CGCCCTGCCCTTTATCGCCGTCTCCCTCCCCGCCTGCTACCTGGGTGCTA GGCTGATCCCCTATGCCGACGAGCGTTTCCTCAAGGCCCTGTATGCAGTC TTCATGCTGGGGCTCAGCGCGTACCTCTTCCTAGAGGAGGAGCCGTGA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig105:51905..52102-

>mRNA_D-mesarthrocarpus_Contig105.15.1 ID=mRNA_D-mesarthrocarpus_Contig105.15.1|Name=mRNA_D-mesarthrocarpus_Contig105.15.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=198bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig105:51905..52102- (Discosporangium mesarthrocarpum MT17_79)
ATGGCAGGGTTGACTGGCTACTTCCGGAGGGGTCTGGTGGATGTCAAGTC
CGCCCTGCCCTTTATCGCCGTCTCCCTCCCCGCCTGCTACCTGGGTGCTA
GGCTGATCCCCTATGCCGACGAGCGTTTCCTCAAGGCCCTGTATGCAGTC
TTCATGCTGGGGCTCAGCGCGTACCTCTTCCTAGAGGAGGAGCCGTGA
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