mRNA_D-mesarthrocarpus_Contig10496.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10496.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10496.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10496.1.1 vs. uniprot
Match: A0A7C7TP04_9GAMM (NADH-quinone oxidoreductase subunit L n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C7TP04_9GAMM)

HSP 1 Score: 991 bits (2563), Expect = 0.000e+0
Identity = 502/616 (81.49%), Postives = 559/616 (90.75%), Query Frame = 1
Query:    1 MLEQIWLLPTFPLLGFLSLVLTAGKLGKRSVAIIGAGSVGLSFLVAASAAASFLGSGEDYFTQHLWTWMSVGAFNPGFSFYIDGLTVVMMLIITGVGFLIHLYSTGFMIDDPSYSRFFAYMNLFVASMLMLVMADNLVLLYLGWEGVGLCSYLLIGFWYENSANGYAARKAFVVTRVGDTSMALGLFLLFAQLGTLNIQDMLHAAEAQWAVGSGLAVAASLLLLGGAVGKSAQLPLQTWLPDAMAGPTPISALIHAATMVTAGVYLIARTHILFELAPSVQELVAWIGLATLLMAGFTAMTQHDIKRILAYSTISQIGYMFLGLGVGAWSASIFHLMTHAFFKALLFLGAGTVILSLHHEHDIFKMGGKRKQLPVAFLSFLIGSLALAAFPFTSGYFSKDEILLAALELEGVGTWLWLGGVIGAFFTGIYSFRLVFVVFFGASRGHDNEREEAGWNMAGPLFVLMVLSLLGGFISIPVDAVFNHGAEHEEHHVSALVHGFMIAVPLLGIAISYLFYGSRTLSIEKLMHSSLAQSLHRFWYSGWGMDRLYNTLFVNPFMWLARLNRKDFIDWCYAMLVELTRAGNSLVVRAQTGYLRWYALSIAIGLVVVISLGVVL 1848
            ML+ IWLLPTFPLLGFLSLVLT G L K+ VA+IGAGS+GLSFLVAA  AA FL +GE +F + +W WMSVG+F+PGF+FY+DGL++VMML+ITG+GFLIHLYS GFM+DDPSYSRFF+YMNLFVASMLMLV+ADNLVLLYLGWEGVGLCSYLLIGFWYEN ANGYAARKAFV TRVGDTSMA+GLFLLFAQLGTLNIQDMLHAAEAQWA+GSGLAVAASLLLLGGAVGKSAQLPLQTWLPDAMAGPTPISALIHAATMVTAGVYLIARTH+LFELAP+VQ LVAWIGL TLLMAGFTAMTQHDIKRILAYST+SQIGYMFLGLGVGA+SASIFHLMTHAFFKALLFL AGTVILSLHHEHDIF+MGGKRKQLPVAF SFLIGSLALAAFP TSG+FSKDEILLAALE+EG G  LW+GGVIGAFFTGIYSFRLVFVVFFG S+ H  ++E AG++MAGPL +LM+LS+ GG I+IPV  VFNHG  HEEHHVSA +HG MIAVPLLGI +SYLFY SR LSIE LM SS+A+SLH+FW+SGWGMDRLY  LFVNPF++LAR+NR D +D  Y +LV+LTR  + +V + QTG LRWYALSIA GL+V++SLGV+L
Sbjct:    1 MLDLIWLLPTFPLLGFLSLVLTGGSLPKKIVAVIGAGSIGLSFLVAAIIAAQFLANGEAHFIKEVWVWMSVGSFSPGFTFYLDGLSLVMMLVITGIGFLIHLYSAGFMLDDPSYSRFFSYMNLFVASMLMLVLADNLVLLYLGWEGVGLCSYLLIGFWYENPANGYAARKAFVTTRVGDTSMAVGLFLLFAQLGTLNIQDMLHAAEAQWAIGSGLAVAASLLLLGGAVGKSAQLPLQTWLPDAMAGPTPISALIHAATMVTAGVYLIARTHVLFELAPNVQLLVAWIGLVTLLMAGFTAMTQHDIKRILAYSTVSQIGYMFLGLGVGAYSASIFHLMTHAFFKALLFLAAGTVILSLHHEHDIFRMGGKRKQLPVAFASFLIGSLALAAFPGTSGFFSKDEILLAALEMEGPGLILWIGGVIGAFFTGIYSFRLVFVVFFGESKAHHEDKEVAGFSMAGPLILLMILSVFGGLITIPVQEVFNHGDVHEEHHVSAFMHGIMIAVPLLGIGVSYLFYMSRALSIENLMASSMAKSLHKFWFSGWGMDRLYQILFVNPFLFLARVNRADLVDRFYELLVQLTRIAHKMVAQTQTGQLRWYALSIAAGLIVIVSLGVLL 616          
BLAST of mRNA_D-mesarthrocarpus_Contig10496.1.1 vs. uniprot
Match: A0A349EAN0_9GAMM (NADH-quinone oxidoreductase subunit L n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A349EAN0_9GAMM)

HSP 1 Score: 978 bits (2529), Expect = 0.000e+0
Identity = 492/614 (80.13%), Postives = 550/614 (89.58%), Query Frame = 1
Query:    7 EQIWLLPTFPLLGFLSLVLTAGKLGKRSVAIIGAGSVGLSFLVAASAAASFLGSGEDYFTQHLWTWMSVGAFNPGFSFYIDGLTVVMMLIITGVGFLIHLYSTGFMIDDPSYSRFFAYMNLFVASMLMLVMADNLVLLYLGWEGVGLCSYLLIGFWYENSANGYAARKAFVVTRVGDTSMALGLFLLFAQLGTLNIQDMLHAAEAQWAVGSGLAVAASLLLLGGAVGKSAQLPLQTWLPDAMAGPTPISALIHAATMVTAGVYLIARTHILFELAPSVQELVAWIGLATLLMAGFTAMTQHDIKRILAYSTISQIGYMFLGLGVGAWSASIFHLMTHAFFKALLFLGAGTVILSLHHEHDIFKMGGKRKQLPVAFLSFLIGSLALAAFPFTSGYFSKDEILLAALELEGVGTWLWLGGVIGAFFTGIYSFRLVFVVFFGASRGHDNEREEAGWNMAGPLFVLMVLSLLGGFISIPVDAVFNHGAEHEEHHVSALVHGFMIAVPLLGIAISYLFYGSRTLSIEKLMHSSLAQSLHRFWYSGWGMDRLYNTLFVNPFMWLARLNRKDFIDWCYAMLVELTRAGNSLVVRAQTGYLRWYALSIAIGLVVVISLGVVL 1848
            + IWLLPTFPLLGFLSLVLT+G L K++VA IGAGS+GLSF+ AA  A  FLGSGE +F   +WTWM+VG FNPGFSFY+DGL++VMML+ITGVGFLIHLYSTGFM+DDPSYSRFF+YMNLFVASMLMLV+ADNLVLLYLGWEGVGLCSYLLIGFWYE   NGYAARKAFV TRVGDTSMA+GLFLLFAQLGTLNIQDMLHAAE QWAVGSGLAVAASLLLLGGAVGKSAQLPLQTWLPDAMAGPTPISALIHAATMVTAGVYLIARTH+LFELAPSVQ LVAWIGL TLLMAGFTAMTQHDIKRILAYST+SQIGYMFLGLGVGAWSAS+FHLMTHAFFKALLFL AGTVI SLHHEHDIFKMGGKRKQLP+AF SF+IGSLALAAFPFTSGYFSKDEIL+AALE+EG G  LW+GGV+GAF TGIYSFRLVFVVFFG S+GH  E+E  G++MA PL +LMVL+L GG+I IPVDAVF+HG  HEEH +S  +H  MIAVPLLGI +SYLFY S+T S+EKLM   +A SLHRFW+SGWGMD LY+ LFV PF+ LAR+N+KDFID  YA+LVE++R  +S++ R QTG LRWYA+SIA  +V++I++GV+L
Sbjct:    3 DLIWLLPTFPLLGFLSLVLTSGNLPKKAVAAIGAGSIGLSFITAALIAVEFLGSGETHFILEVWTWMAVGEFNPGFSFYLDGLSLVMMLVITGVGFLIHLYSTGFMLDDPSYSRFFSYMNLFVASMLMLVLADNLVLLYLGWEGVGLCSYLLIGFWYEKPENGYAARKAFVTTRVGDTSMAIGLFLLFAQLGTLNIQDMLHAAETQWAVGSGLAVAASLLLLGGAVGKSAQLPLQTWLPDAMAGPTPISALIHAATMVTAGVYLIARTHVLFELAPSVQLLVAWIGLITLLMAGFTAMTQHDIKRILAYSTVSQIGYMFLGLGVGAWSASVFHLMTHAFFKALLFLAAGTVIHSLHHEHDIFKMGGKRKQLPIAFASFMIGSLALAAFPFTSGYFSKDEILIAALEMEGPGMLLWMGGVLGAFLTGIYSFRLVFVVFFGQSKGHHEEKEVTGFSMATPLIILMVLALFGGWIQIPVDAVFSHGEAHEEHRISGFLHAVMIAVPLLGIGLSYLFYMSKTFSVEKLMAMPIAASLHRFWFSGWGMDALYDLLFVKPFLLLARINKKDFIDAIYALLVEISRVAHSMLARTQTGQLRWYAMSIAAAVVLLIAIGVLL 616          
BLAST of mRNA_D-mesarthrocarpus_Contig10496.1.1 vs. uniprot
Match: A0A2A5BB01_9GAMM (NADH-quinone oxidoreductase subunit L n=1 Tax=SAR86 cluster bacterium TaxID=2030880 RepID=A0A2A5BB01_9GAMM)

HSP 1 Score: 969 bits (2505), Expect = 0.000e+0
Identity = 484/616 (78.57%), Postives = 546/616 (88.64%), Query Frame = 1
Query:    1 MLEQIWLLPTFPLLGFLSLVLTAGKLGKRSVAIIGAGSVGLSFLVAASAAASFLGSGEDYFTQHLWTWMSVGAFNPGFSFYIDGLTVVMMLIITGVGFLIHLYSTGFMIDDPSYSRFFAYMNLFVASMLMLVMADNLVLLYLGWEGVGLCSYLLIGFWYENSANGYAARKAFVVTRVGDTSMALGLFLLFAQLGTLNIQDMLHAAEAQWAVGSGLAVAASLLLLGGAVGKSAQLPLQTWLPDAMAGPTPISALIHAATMVTAGVYLIARTHILFELAPSVQELVAWIGLATLLMAGFTAMTQHDIKRILAYSTISQIGYMFLGLGVGAWSASIFHLMTHAFFKALLFLGAGTVILSLHHEHDIFKMGGKRKQLPVAFLSFLIGSLALAAFPFTSGYFSKDEILLAALELEGVGTWLWLGGVIGAFFTGIYSFRLVFVVFFGASRGHDNEREEAGWNMAGPLFVLMVLSLLGGFISIPVDAVFNHGAEHEEHHVSALVHGFMIAVPLLGIAISYLFYGSRTLSIEKLMHSSLAQSLHRFWYSGWGMDRLYNTLFVNPFMWLARLNRKDFIDWCYAMLVELTRAGNSLVVRAQTGYLRWYALSIAIGLVVVISLGVVL 1848
            ML+ IWLLPTFPLLGFL LVL++G L K+ VA++G GS+GLSFL AA  A  FL SGE+YF + +W WMSVG F PGFSFY+DGL++VMMLIITGVGFLIHLYS GFM DDPSYSRFFAYMNLFVASMLMLV+ADNLVLLYLGWEGVGLCSYLLIGFWYEN ANGYAARKAF+ TRVGDTSMA+GLFLLFAQLGTLNIQDMLHAAE QW +GSGLAVA SLLLLGGAVGKSAQLPLQTWLPDAMAGPTPISALIHAATMVTAGVYLIARTHILFELAP+VQ LVAWIGL TLLMAGFTAMTQHDIKRILAYSTISQIGYMFLGLGVGAWSAS+FHLMTHAFFKALLFL AGTVILSLHHEHDIFKMGGKRKQLP+AF SF+IGSLALAAFPFTSGYFSKDEIL+AALE++G G WLW GGVIGAFFTGIYSFRLVFVVFFG S+GH   +E AG++MA PLF+LMVL+L GG+I IP+DAVF HG    EHH+S L+HG MI +PLLGI +SYLF+ S+T S +KL+ S L  +LH+FW+SGWGMD LY  + + PF++LAR+N+ D ID  YAM+VELTR  ++++ + QTG +RWYA+++A GLV++ISLGV+L
Sbjct:    1 MLDLIWLLPTFPLLGFLILVLSSGNLPKKIVAVVGVGSIGLSFLTAAIIAVQFLASGEEYFIKEVWVWMSVGEFTPGFSFYLDGLSLVMMLIITGVGFLIHLYSAGFMADDPSYSRFFAYMNLFVASMLMLVLADNLVLLYLGWEGVGLCSYLLIGFWYENPANGYAARKAFITTRVGDTSMAIGLFLLFAQLGTLNIQDMLHAAEMQWPMGSGLAVATSLLLLGGAVGKSAQLPLQTWLPDAMAGPTPISALIHAATMVTAGVYLIARTHILFELAPNVQLLVAWIGLITLLMAGFTAMTQHDIKRILAYSTISQIGYMFLGLGVGAWSASVFHLMTHAFFKALLFLAAGTVILSLHHEHDIFKMGGKRKQLPIAFASFMIGSLALAAFPFTSGYFSKDEILIAALEMDGPGIWLWAGGVIGAFFTGIYSFRLVFVVFFGESKGHHEAKEVAGFSMATPLFILMVLALFGGWIQIPLDAVFGHGEVDGEHHISLLMHGIMIGMPLLGIGVSYLFFMSKTFSADKLVASGLGAALHKFWFSGWGMDALYKAVLIKPFLFLARINKNDIIDSVYAMVVELTRTAHAMIAKTQTGQIRWYAVTVAAGLVLIISLGVLL 616          
BLAST of mRNA_D-mesarthrocarpus_Contig10496.1.1 vs. uniprot
Match: A0A3B9X189_9GAMM (NADH-quinone oxidoreductase subunit L n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3B9X189_9GAMM)

HSP 1 Score: 954 bits (2467), Expect = 0.000e+0
Identity = 477/614 (77.69%), Postives = 538/614 (87.62%), Query Frame = 1
Query:    7 EQIWLLPTFPLLGFLSLVLTAGKLGKRSVAIIGAGSVGLSFLVAASAAASFLGSGEDYFTQHLWTWMSVGAFNPGFSFYIDGLTVVMMLIITGVGFLIHLYSTGFMIDDPSYSRFFAYMNLFVASMLMLVMADNLVLLYLGWEGVGLCSYLLIGFWYENSANGYAARKAFVVTRVGDTSMALGLFLLFAQLGTLNIQDMLHAAEAQWAVGSGLAVAASLLLLGGAVGKSAQLPLQTWLPDAMAGPTPISALIHAATMVTAGVYLIARTHILFELAPSVQELVAWIGLATLLMAGFTAMTQHDIKRILAYSTISQIGYMFLGLGVGAWSASIFHLMTHAFFKALLFLGAGTVILSLHHEHDIFKMGGKRKQLPVAFLSFLIGSLALAAFPFTSGYFSKDEILLAALELEGVGTWLWLGGVIGAFFTGIYSFRLVFVVFFGASRGHDNEREEAGWNMAGPLFVLMVLSLLGGFISIPVDAVFNHGAEHEEHHVSALVHGFMIAVPLLGIAISYLFYGSRTLSIEKLMHSSLAQSLHRFWYSGWGMDRLYNTLFVNPFMWLARLNRKDFIDWCYAMLVELTRAGNSLVVRAQTGYLRWYALSIAIGLVVVISLGVVL 1848
            E IWLLPT PLLGFLSL +T G L KR+VA IGAGS+G +FLVAA  A  FL +GE+ F    W WMSVG+F+PGF+FY+DGL++VMMLIITGVGFLIHLYSTGFM DDPSYSRFF+YMNLFVA+MLMLV+ADNLVLLYLGWEGVGLCSYLLIGFWYEN ANGYAARKAFVVTRVGDTSMA+GLFLLF +LGTLNIQD++ AA+++W +G+G+AVA SLLLLGGAVGKSAQLPLQ WLPDAMAGPTPISALIHAATMVTAGVYLIARTHILFELAPSVQ LVAW+GLATLLMAGFTAMTQHDIKRILAYSTISQIGYMFLGLGVGAWSAS+FHLMTHAFFKALLFL AGTVI SLHHEHDIFKMGGKRKQLP+AF SF+IGSLALAAFPFTSGYFSKDEILLAA    G G WLW GGV+GAF TGIYSFRLVFVVFFGAS GH +E+E+ G++MA PLF+LM+LSLLGG+I IPV++VFNHG  HEEHHVSAL+HG MIAVPL+GIA+SYLF+ S  LS+EKLM    ++ LHRFW+SGW MD LY  L +NPFMWLARLNR DF D  Y  ++ ++R+ + LV + QTGYL WY +S+A GL  V+++GV L
Sbjct:    3 EFIWLLPTLPLLGFLSLAITGGSLPKRAVAAIGAGSIGAAFLVAALIAVEFLNAGEEVFVYQAWVWMSVGSFSPGFTFYLDGLSLVMMLIITGVGFLIHLYSTGFMFDDPSYSRFFSYMNLFVAAMLMLVLADNLVLLYLGWEGVGLCSYLLIGFWYENPANGYAARKAFVVTRVGDTSMAIGLFLLFRELGTLNIQDLMIAAQSEWQIGTGMAVACSLLLLGGAVGKSAQLPLQAWLPDAMAGPTPISALIHAATMVTAGVYLIARTHILFELAPSVQLLVAWVGLATLLMAGFTAMTQHDIKRILAYSTISQIGYMFLGLGVGAWSASVFHLMTHAFFKALLFLAAGTVIYSLHHEHDIFKMGGKRKQLPIAFASFMIGSLALAAFPFTSGYFSKDEILLAAYATGGPGVWLWAGGVLGAFLTGIYSFRLVFVVFFGASHGHHDEKEKTGFSMATPLFILMLLSLLGGWIQIPVESVFNHGQAHEEHHVSALIHGIMIAVPLVGIAVSYLFFISGALSVEKLMSYKFSKILHRFWFSGWAMDALYKHLLINPFMWLARLNRNDFFDALYNSVIAISRSAHGLVAKTQTGYLGWYLISMAAGLTAVLAVGVYL 616          
BLAST of mRNA_D-mesarthrocarpus_Contig10496.1.1 vs. uniprot
Match: A0A2A4XAD7_9GAMM (NADH-quinone oxidoreductase subunit L n=1 Tax=SAR86 cluster bacterium TaxID=2030880 RepID=A0A2A4XAD7_9GAMM)

HSP 1 Score: 954 bits (2466), Expect = 0.000e+0
Identity = 483/614 (78.66%), Postives = 540/614 (87.95%), Query Frame = 1
Query:    7 EQIWLLPTFPLLGFLSLVLTAGKLGKRSVAIIGAGSVGLSFLVAASAAASFLGSGEDYFTQHLWTWMSVGAFNPGFSFYIDGLTVVMMLIITGVGFLIHLYSTGFMIDDPSYSRFFAYMNLFVASMLMLVMADNLVLLYLGWEGVGLCSYLLIGFWYENSANGYAARKAFVVTRVGDTSMALGLFLLFAQLGTLNIQDMLHAAEAQWAVGSGLAVAASLLLLGGAVGKSAQLPLQTWLPDAMAGPTPISALIHAATMVTAGVYLIARTHILFELAPSVQELVAWIGLATLLMAGFTAMTQHDIKRILAYSTISQIGYMFLGLGVGAWSASIFHLMTHAFFKALLFLGAGTVILSLHHEHDIFKMGGKRKQLPVAFLSFLIGSLALAAFPFTSGYFSKDEILLAALELEGVGTWLWLGGVIGAFFTGIYSFRLVFVVFFGASRGHDNEREEAGWNMAGPLFVLMVLSLLGGFISIPVDAVFNHGAEHEEHHVSALVHGFMIAVPLLGIAISYLFYGSRTLSIEKLMHSSLAQSLHRFWYSGWGMDRLYNTLFVNPFMWLARLNRKDFIDWCYAMLVELTRAGNSLVVRAQTGYLRWYALSIAIGLVVVISLGVVL 1848
            + IWLLPT+PLLGFLSLVLT+G L K+ V  IGAGS+GLSFL AA  A  FLGSGE +    +WTWM+VG F PGFSFY+DGL VVMMLIITGVGFLIHLYS GFM+DDPSYSRFFAYMNLFVASML+LV+ADNL+LLYLGWEGVGLCSYLLIGFWYE   NGYAARKAF+ TRVGDTSMA+GLFLLFA+LGTLNIQ+MLHAAE QWAVGSGLAVAASLLLLGGAVGKSAQLPLQTWLPDAMAGPTPISALIHAATMVTAGVYL+ARTH+LFELAP+VQ L+AWIGL TLLMAGFTAMTQHDIKRILAYSTISQIGYMFLGLGVGAWSAS+FHLMTHAFFKALLFL AGTVI SLHHEH IFKMGGKRKQLP+AF SF+IGSLALAAFPFTSGYFSKDEIL+AALE+EG G  LWLGGV+GAF TGIYSFRLVFVVFFG S+GH  E+E AG +MA PL +LMV +L GG+I IPVDAVF+HG  HEEHH+S L+H  MI VPLLGI +SYLF+ S+T S+EKLM + LA  LH FW+SGWGMD LY+ LFV PF++LA++N+ D ID  YA+LVE+TR  + ++ R QTG LRWYALSI  G+V++I+LGVVL
Sbjct:    3 DLIWLLPTYPLLGFLSLVLTSGNLPKKVVGAIGAGSIGLSFLTAAVIAYQFLGSGETHLVVEMWTWMAVGNFTPGFSFYLDGLAVVMMLIITGVGFLIHLYSAGFMLDDPSYSRFFAYMNLFVASMLVLVLADNLLLLYLGWEGVGLCSYLLIGFWYEKPENGYAARKAFITTRVGDTSMAIGLFLLFAELGTLNIQEMLHAAETQWAVGSGLAVAASLLLLGGAVGKSAQLPLQTWLPDAMAGPTPISALIHAATMVTAGVYLVARTHVLFELAPNVQLLLAWIGLITLLMAGFTAMTQHDIKRILAYSTISQIGYMFLGLGVGAWSASVFHLMTHAFFKALLFLAAGTVIHSLHHEHSIFKMGGKRKQLPIAFASFMIGSLALAAFPFTSGYFSKDEILIAALEMEGPGMILWLGGVLGAFLTGIYSFRLVFVVFFGESKGHHEEKEVAGLSMATPLIILMVFALFGGWIQIPVDAVFSHGEVHEEHHISNLMHAIMIVVPLLGIGVSYLFFMSKTFSVEKLMANPLATRLHGFWFSGWGMDALYSFLFVRPFVFLAQVNKNDLIDAVYALLVEITRVAHVMIARTQTGQLRWYALSIGGGVVLLITLGVVL 616          
BLAST of mRNA_D-mesarthrocarpus_Contig10496.1.1 vs. uniprot
Match: A0A2E9JJY3_9GAMM (NADH-quinone oxidoreductase subunit L n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E9JJY3_9GAMM)

HSP 1 Score: 949 bits (2453), Expect = 0.000e+0
Identity = 478/616 (77.60%), Postives = 545/616 (88.47%), Query Frame = 1
Query:    1 MLEQIWLLPTFPLLGFLSLVLTAGKLGKRSVAIIGAGSVGLSFLVAASAAASFLGSGEDYFTQHLWTWMSVGAFNPGFSFYIDGLTVVMMLIITGVGFLIHLYSTGFMIDDPSYSRFFAYMNLFVASMLMLVMADNLVLLYLGWEGVGLCSYLLIGFWYENSANGYAARKAFVVTRVGDTSMALGLFLLFAQLGTLNIQDMLHAAEAQWAVGSGLAVAASLLLLGGAVGKSAQLPLQTWLPDAMAGPTPISALIHAATMVTAGVYLIARTHILFELAPSVQELVAWIGLATLLMAGFTAMTQHDIKRILAYSTISQIGYMFLGLGVGAWSASIFHLMTHAFFKALLFLGAGTVILSLHHEHDIFKMGGKRKQLPVAFLSFLIGSLALAAFPFTSGYFSKDEILLAALELEGVGTWLWLGGVIGAFFTGIYSFRLVFVVFFGASRGHDNEREEAGWNMAGPLFVLMVLSLLGGFISIPVDAVFNHGAEHEEHHVSALVHGFMIAVPLLGIAISYLFYGSRTLSIEKLMHSSLAQSLHRFWYSGWGMDRLYNTLFVNPFMWLARLNRKDFIDWCYAMLVELTRAGNSLVVRAQTGYLRWYALSIAIGLVVVISLGVVL 1848
            ML+ IWLLPTF LLGFLSLVLTAG L KR  AIIGAGSVGLSF VA   A  FLGSGE+YF + +WTWMSVG+ N GFSFY+DGL++ MML+ITG+GFLIHLY+TG+M DDP +SRFFAYMNLFVA+MLMLV+ DNL+LLYLGWEGVGLCSYLLIGFWY N  NGYAARKAFVVTRVGDTSMA+GLFLLFAQLGTLNIQD+++AAE QWAVGSGLAVA SLL+LGGAVGKSAQLPLQTWLPDAMAGPTPISALIHAATMVTAGVYL+ARTHILFELAP+VQ LVAWIGL TLLMAGFTA+TQ DIKRILAYST+SQIGYMFL LGVGAWSAS+FHLMTHAFFKALLFL +GTVILSLHHE +IFKMGG RKQLPV+F SFLIGSLAL AFPFTSGYFSKDEILLAALEL+G G WLW+GGV+GAFFTG+Y+FRL FVVFFG ++GH+  +E  GWNM+ PLFVLMV +LL GFI +P+DAVF  G   EEH VSAL+HG MIA PLLGI I+YLFY S+T S++KLM S LA+SLH+FW+SGWGMD LYN LFV PF+WLAR+N+ D +D  YA +V L+RA ++++V+ QTGYLRWYALS+A GLV++++LGV+L
Sbjct:    1 MLDLIWLLPTFSLLGFLSLVLTAGTLPKRIAAIIGAGSVGLSFAVAVIIAIQFLGSGEEYFVKEVWTWMSVGSLNAGFSFYLDGLSLTMMLVITGIGFLIHLYATGYMDDDPGFSRFFAYMNLFVAAMLMLVLGDNLILLYLGWEGVGLCSYLLIGFWYTNPENGYAARKAFVVTRVGDTSMAIGLFLLFAQLGTLNIQDLMYAAETQWAVGSGLAVAVSLLILGGAVGKSAQLPLQTWLPDAMAGPTPISALIHAATMVTAGVYLVARTHILFELAPTVQLLVAWIGLITLLMAGFTALTQSDIKRILAYSTMSQIGYMFLALGVGAWSASVFHLMTHAFFKALLFLASGTVILSLHHEQNIFKMGGVRKQLPVSFWSFLIGSLALTAFPFTSGYFSKDEILLAALELDGPGLWLWMGGVLGAFFTGLYTFRLFFVVFFGDNKGHEPTQEVGGWNMSWPLFVLMVGALLAGFIGLPLDAVFG-GHGEEEHDVSALIHGIMIAAPLLGIGIAYLFYYSKTFSVDKLMASPLAKSLHKFWFSGWGMDALYNWLFVYPFLWLARINKDDLVDKLYAFVVVLSRAAHAMIVKTQTGYLRWYALSVATGLVLILTLGVLL 615          
BLAST of mRNA_D-mesarthrocarpus_Contig10496.1.1 vs. uniprot
Match: A0A2E9ZF63_9GAMM (NADH-quinone oxidoreductase subunit L n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E9ZF63_9GAMM)

HSP 1 Score: 947 bits (2448), Expect = 0.000e+0
Identity = 478/614 (77.85%), Postives = 541/614 (88.11%), Query Frame = 1
Query:    7 EQIWLLPTFPLLGFLSLVLTAGKLGKRSVAIIGAGSVGLSFLVAASAAASFLGSGEDYFTQHLWTWMSVGAFNPGFSFYIDGLTVVMMLIITGVGFLIHLYSTGFMIDDPSYSRFFAYMNLFVASMLMLVMADNLVLLYLGWEGVGLCSYLLIGFWYENSANGYAARKAFVVTRVGDTSMALGLFLLFAQLGTLNIQDMLHAAEAQWAVGSGLAVAASLLLLGGAVGKSAQLPLQTWLPDAMAGPTPISALIHAATMVTAGVYLIARTHILFELAPSVQELVAWIGLATLLMAGFTAMTQHDIKRILAYSTISQIGYMFLGLGVGAWSASIFHLMTHAFFKALLFLGAGTVILSLHHEHDIFKMGGKRKQLPVAFLSFLIGSLALAAFPFTSGYFSKDEILLAALELEGVGTWLWLGGVIGAFFTGIYSFRLVFVVFFGASRGHDNEREEAGWNMAGPLFVLMVLSLLGGFISIPVDAVFNHGAEHEEHHVSALVHGFMIAVPLLGIAISYLFYGSRTLSIEKLMHSSLAQSLHRFWYSGWGMDRLYNTLFVNPFMWLARLNRKDFIDWCYAMLVELTRAGNSLVVRAQTGYLRWYALSIAIGLVVVISLGVVL 1848
            + IWLLPTFPLLGFL+LVLT G L ++ VA+IGAGSVGLSFL AA  AA FL SGEDYF + +W WM++G F PGF+FY+DGL++VMMLIITGVGFLIHLYSTGFM+DDP+YSRFFAYMNLFVA+MLMLV+ DNLVLLYLGWEGVGLCSYLLIGFWYEN  NGYAARKAFVVTRVGDT+MA+GLFLLF QLGTLNIQDML AA+ QWA+GS LA+AA+LLLLGGAVGKSAQLPLQTWLPDAM GPTPISALIHAATMVTAGVYL+ARTH+LFELAP+VQ LVA++GLATLLMAGFTAMTQ DIKRILAYSTISQIGYMFL LG GAWSA++FHLMTHAFFKALLFL AGTVILSLHHEHDIFKMGGKRKQLPVAF SF+IGS ALAA PFTSG++SKDEILLAAL +EG G  LW+GGVIGAFFTGIYSFRLVFVVFFG S+ H   +EEA  +MA PL VLMVL+LLGG+I +P+DAVF+ GA HEE HVS LVHGFMIA PL+GI ISYLFY S+   ++KLM + +A SLHRFW+SGWGMD LY  +FVNPF++LAR+NR D ID  YA+LV +TR  + ++ R QTGYL WYALS+A GLVV+I+LGV+L
Sbjct:    3 DLIWLLPTFPLLGFLALVLTGGSLPRKIVAVIGAGSVGLSFLSAALIAAQFLASGEDYFVKEVWVWMAIGEFTPGFNFYLDGLSLVMMLIITGVGFLIHLYSTGFMVDDPAYSRFFAYMNLFVAAMLMLVLGDNLVLLYLGWEGVGLCSYLLIGFWYENPDNGYAARKAFVVTRVGDTAMAIGLFLLFTQLGTLNIQDMLGAAQQQWAMGSPLAIAAALLLLGGAVGKSAQLPLQTWLPDAMVGPTPISALIHAATMVTAGVYLVARTHVLFELAPTVQMLVAFVGLATLLMAGFTAMTQRDIKRILAYSTISQIGYMFLALGAGAWSAAVFHLMTHAFFKALLFLAAGTVILSLHHEHDIFKMGGKRKQLPVAFWSFIIGSAALAALPFTSGFYSKDEILLAALAVEGPGLLLWIGGVIGAFFTGIYSFRLVFVVFFGDSKAHHEAKEEASLSMAVPLIVLMVLALLGGWIQVPLDAVFSQGAGHEEEHVSLLVHGFMIAAPLMGIGISYLFYMSKVFDVDKLMTNRVANSLHRFWFSGWGMDALYQWIFVNPFLYLARINRSDLIDGFYALLVSITRTAHLMLARTQTGYLGWYALSMAAGLVVIITLGVML 616          
BLAST of mRNA_D-mesarthrocarpus_Contig10496.1.1 vs. uniprot
Match: A0A2E1TYG5_9GAMM (NADH-quinone oxidoreductase subunit L n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E1TYG5_9GAMM)

HSP 1 Score: 944 bits (2440), Expect = 0.000e+0
Identity = 475/614 (77.36%), Postives = 541/614 (88.11%), Query Frame = 1
Query:    7 EQIWLLPTFPLLGFLSLVLTAGKLGKRSVAIIGAGSVGLSFLVAASAAASFLGSGEDYFTQHLWTWMSVGAFNPGFSFYIDGLTVVMMLIITGVGFLIHLYSTGFMIDDPSYSRFFAYMNLFVASMLMLVMADNLVLLYLGWEGVGLCSYLLIGFWYENSANGYAARKAFVVTRVGDTSMALGLFLLFAQLGTLNIQDMLHAAEAQWAVGSGLAVAASLLLLGGAVGKSAQLPLQTWLPDAMAGPTPISALIHAATMVTAGVYLIARTHILFELAPSVQELVAWIGLATLLMAGFTAMTQHDIKRILAYSTISQIGYMFLGLGVGAWSASIFHLMTHAFFKALLFLGAGTVILSLHHEHDIFKMGGKRKQLPVAFLSFLIGSLALAAFPFTSGYFSKDEILLAALELEGVGTWLWLGGVIGAFFTGIYSFRLVFVVFFGASRGHDNEREEAGWNMAGPLFVLMVLSLLGGFISIPVDAVFNHGAEHEEHHVSALVHGFMIAVPLLGIAISYLFYGSRTLSIEKLMHSSLAQSLHRFWYSGWGMDRLYNTLFVNPFMWLARLNRKDFIDWCYAMLVELTRAGNSLVVRAQTGYLRWYALSIAIGLVVVISLGVVL 1848
            E IWLLPTFPLLGFL+LV+TAG L KR+VA IGAGSVGLSF+VA   A  FL SGEDYF + +WTWMSVG FNPGFSFY+DGL++VMML+ITGVGFLIH Y+TG M DDPSYSRFF+YMNLFVA+MLMLV+ DNLV+LYLGWEGVGLCSYLLIGFWY    NGYAARKAF+VTRVGDTSMA+GLFLLFAQLGTLNIQD+LH+AE +W VGS LAVA SLLLLGGAVGKSAQLPLQTWLPDAMAGPTPISALIHAATMVTAGVYLIARTH+LFE+APSVQ LVAWIGL TLLMAGFTA+TQ DIKRILA+ST+SQIGYMFLGLGVGAWSA+IFHLMTHAFFKALLFL +GTVILS+HHE  IFKMGG RK LPV+F SFLIGSLAL AFP+TSGYFSKDEILLAALELEGVGT LWLGGV+GA FTGIY+FRL F+VF+G ++GH  E+E  GW+M GPL +LM+LSL+GGFI++PVDAVF H   H EHHVSALVHGFMIAVPL+GI ISY+F+ S+  SIEKLM S  AQ LH+FW SGWGMD LY+ +FV PF+WL+R+N+ D ID  Y ++V L+R  N+ VVR QTG+LRWYALS+A+GL+V++ LGV++
Sbjct:    3 ELIWLLPTFPLLGFLALVITAGSLPKRAVAFIGAGSVGLSFVVALFIAYEFLLSGEDYFVKQVWTWMSVGNFNPGFSFYLDGLSLVMMLVITGVGFLIHSYATGXMADDPSYSRFFSYMNLFVAAMLMLVLGDNLVVLYLGWEGVGLCSYLLIGFWYTKPENGYAARKAFIVTRVGDTSMAIGLFLLFAQLGTLNIQDLLHSAELEWQVGSNLAVATSLLLLGGAVGKSAQLPLQTWLPDAMAGPTPISALIHAATMVTAGVYLIARTHVLFEIAPSVQLLVAWIGLITLLMAGFTALTQSDIKRILAFSTVSQIGYMFLGLGVGAWSAAIFHLMTHAFFKALLFLASGTVILSVHHEQSIFKMGGLRKALPVSFASFLIGSLALTAFPYTSGYFSKDEILLAALELEGVGTLLWLGGVLGALFTGIYTFRLFFIVFYGENQGHFPEKEVGGWHMNGPLILLMILSLVGGFITVPVDAVFGHEGAHAEHHVSALVHGFMIAVPLIGIFISYMFFYSKAWSIEKLMSSLFAQKLHKFWNSGWGMDWLYDRVFVFPFIWLSRINQADLIDKFYGLIVMLSRVTNNYVVRTQTGHLRWYALSLAVGLIVLLILGVLM 616          
BLAST of mRNA_D-mesarthrocarpus_Contig10496.1.1 vs. uniprot
Match: A0A2E8F6W7_9GAMM (NADH-quinone oxidoreductase subunit L n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E8F6W7_9GAMM)

HSP 1 Score: 941 bits (2432), Expect = 0.000e+0
Identity = 473/616 (76.79%), Postives = 543/616 (88.15%), Query Frame = 1
Query:    1 MLEQIWLLPTFPLLGFLSLVLTAGKLGKRSVAIIGAGSVGLSFLVAASAAASFLGSGEDYFTQHLWTWMSVGAFNPGFSFYIDGLTVVMMLIITGVGFLIHLYSTGFMIDDPSYSRFFAYMNLFVASMLMLVMADNLVLLYLGWEGVGLCSYLLIGFWYENSANGYAARKAFVVTRVGDTSMALGLFLLFAQLGTLNIQDMLHAAEAQWAVGSGLAVAASLLLLGGAVGKSAQLPLQTWLPDAMAGPTPISALIHAATMVTAGVYLIARTHILFELAPSVQELVAWIGLATLLMAGFTAMTQHDIKRILAYSTISQIGYMFLGLGVGAWSASIFHLMTHAFFKALLFLGAGTVILSLHHEHDIFKMGGKRKQLPVAFLSFLIGSLALAAFPFTSGYFSKDEILLAALELEGVGTWLWLGGVIGAFFTGIYSFRLVFVVFFGASRGHDNEREEAGWNMAGPLFVLMVLSLLGGFISIPVDAVFNHGAEHEEHHVSALVHGFMIAVPLLGIAISYLFYGSRTLSIEKLMHSSLAQSLHRFWYSGWGMDRLYNTLFVNPFMWLARLNRKDFIDWCYAMLVELTRAGNSLVVRAQTGYLRWYALSIAIGLVVVISLGVVL 1848
            M++ IWLLPTFPLLGFLSLVLT G + K++ A IGAGSVGLSF++AA  A  FLGSGE++  +H+WTWM+VG F PGF+FY+DGL +VMMLIITGVGFLIHLYSTGFM+DDP Y+RFF+YMNLF+A+MLMLV+ADNLVLLYLGWEGVGLCSYLLIGFWY N  NG+AARKAFVVTRVGDT+MA+GLFLLF+Q GTLNIQ++L  AE QW  GSGLAVAA+LLLLGGAVGKSAQLPLQTWLPDAMAGPTPISALIHAATMVTAGVYL+ARTHILFELAPSVQ LVA IGL TLLMAGFTA+TQHDIKRILAYSTISQIGYMFLGLGVGAWSA+IFHLMTHAFFKALLFLGAGTVILSLHHEHDIFKMGGK K+LP+AF SF+IGSLALAAFPFTSGYFSKDEILLAAL +EG G WLW+GGV GAF TG+YSFRLVFVVFFG S+ H +  E AG +MA PL +LMV S+LGG I +PV++VF+HG  HEEHH S L+H  MIAVPL+GI ISYLFYG++T S ++LM S +A++LHRFW+SGWG+D LY  L VNPF++LAR+NR D ID  YA+LV LTRA N ++ + QTG LRWYALS+A GLV++++LGV+L
Sbjct:    1 MIDFIWLLPTFPLLGFLSLVLTGGNMPKKASAWIGAGSVGLSFMLAAIIAVQFLGSGEEFAVRHVWTWMAVGDFTPGFTFYLDGLALVMMLIITGVGFLIHLYSTGFMVDDPGYARFFSYMNLFIAAMLMLVLADNLVLLYLGWEGVGLCSYLLIGFWYTNPENGHAARKAFVVTRVGDTAMAIGLFLLFSQFGTLNIQEILVNAEEQWVTGSGLAVAAALLLLGGAVGKSAQLPLQTWLPDAMAGPTPISALIHAATMVTAGVYLVARTHILFELAPSVQMLVAVIGLITLLMAGFTALTQHDIKRILAYSTISQIGYMFLGLGVGAWSAAIFHLMTHAFFKALLFLGAGTVILSLHHEHDIFKMGGKWKKLPIAFASFMIGSLALAAFPFTSGYFSKDEILLAALAVEGPGLWLWMGGVAGAFLTGLYSFRLVFVVFFGESKDHHDASEVAGISMAAPLIILMVFSVLGGLIQVPVESVFDHGEVHEEHHASFLMHAIMIAVPLMGIGISYLFYGAKTFSTDRLMSSXVAKTLHRFWFSGWGLDALYQHLLVNPFLFLARINRDDLIDKFYALLVILTRAANGMIAQTQTGNLRWYALSVAAGLVLLMTLGVLL 616          
BLAST of mRNA_D-mesarthrocarpus_Contig10496.1.1 vs. uniprot
Match: A0A359GUU2_9GAMM (NADH-quinone oxidoreductase subunit L n=9 Tax=root TaxID=1 RepID=A0A359GUU2_9GAMM)

HSP 1 Score: 940 bits (2430), Expect = 0.000e+0
Identity = 472/616 (76.62%), Postives = 530/616 (86.04%), Query Frame = 1
Query:    1 MLEQIWLLPTFPLLGFLSLVLTAGKLGKRSVAIIGAGSVGLSFLVAASAAASFLGSGEDYFTQHLWTWMSVGAFNPGFSFYIDGLTVVMMLIITGVGFLIHLYSTGFMIDDPSYSRFFAYMNLFVASMLMLVMADNLVLLYLGWEGVGLCSYLLIGFWYENSANGYAARKAFVVTRVGDTSMALGLFLLFAQLGTLNIQDMLHAAEAQWAVGSGLAVAASLLLLGGAVGKSAQLPLQTWLPDAMAGPTPISALIHAATMVTAGVYLIARTHILFELAPSVQELVAWIGLATLLMAGFTAMTQHDIKRILAYSTISQIGYMFLGLGVGAWSASIFHLMTHAFFKALLFLGAGTVILSLHHEHDIFKMGGKRKQLPVAFLSFLIGSLALAAFPFTSGYFSKDEILLAALELEGVGTWLWLGGVIGAFFTGIYSFRLVFVVFFGASRGHDNEREEAGWNMAGPLFVLMVLSLLGGFISIPVDAVFNHGAEHEEHHVSALVHGFMIAVPLLGIAISYLFYGSRTLSIEKLMHSSLAQSLHRFWYSGWGMDRLYNTLFVNPFMWLARLNRKDFIDWCYAMLVELTRAGNSLVVRAQTGYLRWYALSIAIGLVVVISLGVVL 1848
            ML+ IWLLPT PLLGFL L+LTAG L KR+VAIIGAGS+G+SFLVA   A  FL SGE+YF +  W WM+VG FN GF+FY+DGL++VMMLIITG+GFLIHLY+TG+M DDP+YSRFF+YMNLFVA+MLMLV+ DNLV+LYLGWEGVGLCSYLLIGFWY N  NGYAARKAFVVTRVGDTSMA+GLFLLFA LGTLNIQD+LHAAE QWAVGSGLAVA SLLLLGGAVGKSAQLPLQTWLPDAMAGPTPISALIHAATMVTAGVYLIARTH LFE+AP VQ L+A IGL TLLMAGFTA+TQ DIKRILAYST+SQIGYMFLGLG GAWSA+IFHLMTHAFFKALLFL AGTVILSLHHE +IF MGGKRKQLPV+F SFL GSLAL AFPFTSGYFSKDEILL AL ++G+G WLWLGGV+GAF T IY+FRL FVVFFG S  HDN +E  GWNM GPLFVLM  SL  GF+ +P+D VF+ G  HEEHHVSAL+HG MI VPLLGI I+YLFYGSR LS  ++M S  AQ LH FW++GWGMD LYN LFVNPF+WLAR+N  D +D  Y  L+ L+R GN L+V+ QTGYLRWYAL++A GLV +I+LG++L
Sbjct:    1 MLDYIWLLPTLPLLGFLLLILTAGHLPKRAVAIIGAGSIGVSFLVALIIAVRFLASGEEYFIKETWAWMAVGGFNAGFNFYLDGLSLVMMLIITGIGFLIHLYATGYMADDPNYSRFFSYMNLFVAAMLMLVLGDNLVVLYLGWEGVGLCSYLLIGFWYTNPENGYAARKAFVVTRVGDTSMAIGLFLLFASLGTLNIQDILHAAEMQWAVGSGLAVAVSLLLLGGAVGKSAQLPLQTWLPDAMAGPTPISALIHAATMVTAGVYLIARTHTLFEMAPLVQTLIAVIGLITLLMAGFTALTQTDIKRILAYSTVSQIGYMFLGLGAGAWSAAIFHLMTHAFFKALLFLAAGTVILSLHHEQNIFNMGGKRKQLPVSFYSFLFGSLALTAFPFTSGYFSKDEILLGALAVDGLGWWLWLGGVMGAFLTSIYTFRLFFVVFFGESGRHDNVKEFGGWNMRGPLFVLMAGSLFAGFMYLPLDIVFSQGEPHEEHHVSALIHGIMIVVPLLGIGIAYLFYGSRKLSTARIMASPFAQRLHTFWFNGWGMDTLYNRLFVNPFLWLARINENDIVDKIYDFLIVLSRIGNRLIVQTQTGYLRWYALTVATGLVFIITLGILL 616          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10496.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C7TP04_9GAMM0.000e+081.49NADH-quinone oxidoreductase subunit L n=1 Tax=Gamm... [more]
A0A349EAN0_9GAMM0.000e+080.13NADH-quinone oxidoreductase subunit L n=1 Tax=Gamm... [more]
A0A2A5BB01_9GAMM0.000e+078.57NADH-quinone oxidoreductase subunit L n=1 Tax=SAR8... [more]
A0A3B9X189_9GAMM0.000e+077.69NADH-quinone oxidoreductase subunit L n=1 Tax=Gamm... [more]
A0A2A4XAD7_9GAMM0.000e+078.66NADH-quinone oxidoreductase subunit L n=1 Tax=SAR8... [more]
A0A2E9JJY3_9GAMM0.000e+077.60NADH-quinone oxidoreductase subunit L n=2 Tax=Gamm... [more]
A0A2E9ZF63_9GAMM0.000e+077.85NADH-quinone oxidoreductase subunit L n=1 Tax=Gamm... [more]
A0A2E1TYG5_9GAMM0.000e+077.36NADH-quinone oxidoreductase subunit L n=2 Tax=Gamm... [more]
A0A2E8F6W7_9GAMM0.000e+076.79NADH-quinone oxidoreductase subunit L n=1 Tax=Gamm... [more]
A0A359GUU2_9GAMM0.000e+076.62NADH-quinone oxidoreductase subunit L n=9 Tax=root... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10496contigD-mesarthrocarpus_Contig10496:517..3857 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog247634.GPB2148_2301
Preferred namenuoL
PFAMsProton_antipo_M,Proton_antipo_N
Model size3341
Max annot lvl1236|Gammaproteobacteria
KEGG rclassRC00061
KEGG koko:K00341
KEGG TC3.D.1
KEGG ReactionR11945
KEGG Pathwayko00190,ko01100,map00190,map01100
KEGG ModuleM00144
Hectar predicted targeting categorysignal peptide
GOsGO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015672,GO:0015988,GO:0015990,GO:0016020,GO:0016021,GO:0030964,GO:0031224,GO:0031226,GO:0032991,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0051179,GO:0051234,GO:0055085,GO:0070469,GO:0070470,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1902600,GO:1990204
Exons1
Evalue4.21e-247
EggNOG OGsCOG1009@1|root,COG1009@2|Bacteria,1MW2M@1224|Proteobacteria,1RNKN@1236|Gammaproteobacteria,1J4U3@118884|unclassified Gammaproteobacteria
EC1.6.5.3
DescriptionCP COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit
Cds size1851
COG categoryCP
BiGG Reactione_coli_core.b2278,iAF1260.b2278,iBWG_1329.BWG_2052,iECDH10B_1368.ECDH10B_2440,iECDH1ME8569_1439.ECDH1ME8569_2215,iEcDH1_1363.EcDH1_1379,iJN746.PP_4129,iJO1366.b2278,iJR904.b2278,iY75_1357.Y75_RS11945
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789186.036049-UTR-D-mesarthrocarpus_Contig10496:516..20061680789186.036049-UTR-D-mesarthrocarpus_Contig10496:516..2006Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10496 517..2006 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789186.0560915-CDS-D-mesarthrocarpus_Contig10496:2006..38571680789186.0560915-CDS-D-mesarthrocarpus_Contig10496:2006..3857Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10496 2007..3857 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10496.1.1prot_D-mesarthrocarpus_Contig10496.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10496 2007..3857 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10496.1.1

>prot_D-mesarthrocarpus_Contig10496.1.1 ID=prot_D-mesarthrocarpus_Contig10496.1.1|Name=mRNA_D-mesarthrocarpus_Contig10496.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=617bp
MLEQIWLLPTFPLLGFLSLVLTAGKLGKRSVAIIGAGSVGLSFLVAASAA
ASFLGSGEDYFTQHLWTWMSVGAFNPGFSFYIDGLTVVMMLIITGVGFLI
HLYSTGFMIDDPSYSRFFAYMNLFVASMLMLVMADNLVLLYLGWEGVGLC
SYLLIGFWYENSANGYAARKAFVVTRVGDTSMALGLFLLFAQLGTLNIQD
MLHAAEAQWAVGSGLAVAASLLLLGGAVGKSAQLPLQTWLPDAMAGPTPI
SALIHAATMVTAGVYLIARTHILFELAPSVQELVAWIGLATLLMAGFTAM
TQHDIKRILAYSTISQIGYMFLGLGVGAWSASIFHLMTHAFFKALLFLGA
GTVILSLHHEHDIFKMGGKRKQLPVAFLSFLIGSLALAAFPFTSGYFSKD
EILLAALELEGVGTWLWLGGVIGAFFTGIYSFRLVFVVFFGASRGHDNER
EEAGWNMAGPLFVLMVLSLLGGFISIPVDAVFNHGAEHEEHHVSALVHGF
MIAVPLLGIAISYLFYGSRTLSIEKLMHSSLAQSLHRFWYSGWGMDRLYN
TLFVNPFMWLARLNRKDFIDWCYAMLVELTRAGNSLVVRAQTGYLRWYAL
SIAIGLVVVISLGVVL*
back to top

mRNA from alignment at D-mesarthrocarpus_Contig10496:517..3857-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10496.1.1 ID=mRNA_D-mesarthrocarpus_Contig10496.1.1|Name=mRNA_D-mesarthrocarpus_Contig10496.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3341bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10496:517..3857- (Discosporangium mesarthrocarpum MT17_79)
ATGCTTGAGCAGATCTGGTTACTGCCTACGTTTCCCCTGTTGGGTTTTCT CAGTCTGGTGCTGACTGCCGGCAAGCTGGGCAAGCGCAGCGTGGCAATTA TCGGCGCGGGCTCGGTGGGCTTGTCGTTTCTGGTGGCTGCCAGTGCCGCC GCAAGTTTCCTGGGCAGTGGCGAAGACTATTTTACCCAGCATCTCTGGAC CTGGATGTCGGTAGGGGCATTCAATCCCGGATTCAGTTTCTATATTGACG GCCTGACGGTGGTGATGATGCTGATCATTACCGGGGTCGGCTTTCTGATT CATCTTTATTCCACCGGTTTCATGATTGACGACCCCAGCTACAGCCGGTT CTTTGCCTATATGAACCTGTTCGTGGCGTCCATGCTGATGCTGGTCATGG CGGACAATCTGGTGCTGCTGTATCTGGGCTGGGAAGGCGTCGGCCTGTGC AGCTACCTGCTGATTGGCTTCTGGTATGAGAACTCCGCGAACGGCTATGC GGCGCGCAAGGCCTTCGTGGTTACCCGGGTGGGCGATACCTCAATGGCCC TGGGGCTGTTCCTGCTGTTTGCGCAACTGGGCACCCTGAATATCCAGGAC ATGCTGCACGCGGCCGAAGCGCAGTGGGCGGTAGGATCCGGCCTGGCGGT GGCGGCCTCACTGTTGTTACTGGGCGGTGCGGTGGGCAAATCGGCGCAGC TACCGCTGCAGACCTGGCTGCCCGACGCCATGGCTGGCCCAACCCCAATC AGCGCCCTGATTCACGCGGCCACCATGGTGACCGCCGGTGTGTACCTGAT CGCGCGGACACACATCCTTTTCGAACTGGCGCCTTCGGTACAGGAGCTGG TGGCCTGGATCGGTCTGGCAACGCTGCTGATGGCAGGCTTCACCGCCATG ACCCAGCATGACATCAAACGAATCCTGGCCTATTCCACGATCAGTCAGAT CGGCTACATGTTCCTCGGTCTGGGTGTAGGGGCCTGGTCGGCATCCATCT TTCACCTGATGACCCACGCATTTTTCAAGGCGCTGCTGTTTCTTGGTGCC GGTACGGTCATTCTCAGCCTTCATCATGAGCACGATATCTTCAAGATGGG CGGCAAGCGCAAGCAGCTGCCGGTGGCTTTCCTGTCGTTCCTGATTGGCA GTCTCGCCCTGGCGGCGTTTCCCTTTACCTCGGGCTACTTCAGCAAGGAT GAAATATTGCTGGCCGCCCTGGAGCTGGAAGGCGTTGGCACCTGGCTGTG GCTGGGCGGCGTGATCGGCGCATTCTTCACCGGTATCTACAGTTTCCGGC TGGTGTTCGTGGTGTTTTTCGGTGCGAGCCGAGGTCATGACAACGAGCGC GAGGAAGCCGGCTGGAATATGGCCGGCCCACTGTTTGTGTTGATGGTGCT ATCCCTGCTGGGCGGCTTTATCAGCATCCCTGTTGATGCCGTATTCAATC ATGGCGCCGAACACGAGGAGCATCATGTCAGTGCTCTGGTGCACGGCTTT ATGATTGCGGTGCCACTGCTGGGTATTGCCATCAGTTATCTGTTTTATGG CTCACGGACCCTGTCTATTGAGAAGCTGATGCACAGCTCCCTTGCTCAGT CCCTGCACCGTTTCTGGTATTCCGGATGGGGTATGGATCGGCTCTACAAC ACCCTGTTCGTTAATCCCTTTATGTGGCTGGCAAGACTCAACCGCAAGGA TTTCATCGACTGGTGCTATGCCATGCTGGTGGAACTCACCCGGGCTGGTA ACTCTCTGGTGGTGCGGGCACAAACCGGCTATCTGCGCTGGTACGCCCTG AGTATTGCGATTGGCCTGGTTGTTGTTATTTCCCTGGGGGTAGTACTGTG ATTCTCGTACTGCTCATCAGTTTGTTGTTTGTGGGGGGCGTGCTGGCCTG GCTGGCGGAGTCTCTCGATCCACATCTGCCCCGGGCTGTGGCCATGGGCA GTGTCCTGCTGACCTTGCTGGTAATGCTGTTCCTGCTGGGTGCCGAACCC GATGCCGGGGGCTGGCTGGCGGCGGTTGATGTGCCGTGGTTGCCGCGCTT TGGTATTTCCTTCTACCTGGCGGTCGATGGGCTGAGTTTGTTGCTACTGC TGTTGACCGGGTTTCTCGGCGCCATTGCCGTGGCCAGCGCCTGGGATGAA ATCAAGGAGCGCCCCGGTTTCTTCTATTTCAACCTGCTCTGGACCCTGGC TGGCGTACTCGGTGTGTTCCTGGCGCTGGATTTGTTCCTGTTCTTCTTTT TCTGGGAAGTCATGCTGATTCCCATGTATTTCATCATTGCCATCTGGGGA CATGAGAACAAGAACTACGCCGCGATGAAGTTCTTTATCTTCACCCAGGT CAGTGGCCTGTTGATGCTGGTGTCGATCCTGGTTCTGGCATACTTCCACT TCGTACAGTTCGGGGACATCAGTTTTCGCTACCAGGACCTGCTGGCGGTG ACATTCAGTGGCTCAATAGAAATGTGGGTCATGCTCGGTTTCTTTATTGC CTTTACTACCAAGCTGCCCAGTGTGCCGTTTCACTCCTGGCTGCCGGATG CCCACAGCCAGGCACCCACCGCTGGCAGCGTGATTCTGGCTGGCATTTTG CTCAAGACCGGTGCCTATGGCCTGATCCGTTTTGCAGTGCCGCTGTTTCC GGATGCGTCCATGAGTTTCGCGCCGGTGGCCATGACCCTGGCGGCCTTCA GTATTCTTTACTGCGCCAAGGTGGCGTTCGCCCAGGATGATCTCAAGCGC CTGATTGCCTACACCAGCGTCAGCCACATGGGCTTCGTCACCCTGGGAGT GTATGCCTGGAACGAGCAGGCGCTGCAGGGGGCGGTAATGACCATGCTGG CGCACGGCCTGTCGGCGGCAGCGTTATTTATGCTGGCCGGCGGCCTGCAA CACCGTATTCACACCCGGCACATGCCGGATATGAGTGGCTTCTGGCGCCA GGTGCCACGCATGGCAACGGTGGCCCTGTTCTTCTCCGTGGCGGCCCTGG GTATGCCCGGGCTTGGCAATTTCATTGGCGAGTTTCTTGCGCTGCTGGGC GCCTTCCAGGCCAACATCGTCGCTACCGTGTTTGCCGCGATCGGCCTGGT GCTGGCCTCGGTGTACTCCCTGTGGGTTATCCAGCAGGTATTCCATGGTG AGTATCACGCCGACAAATTTGAATCTGACCATCTCACCGATCTTAACCGC CGCGAAATGACATTTTTTATTGCCATGATGCTGGGTCTGGTGTGGATGGG TATGTATCCCCAGTCATTTTTATCGCTCTCCCAGCCGGTACTTGCCGGAC TGCTGGAGTACAGCGCCACACTGACTGATATAGCGGGGCAG
back to top

Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10496:517..3857-

>mRNA_D-mesarthrocarpus_Contig10496.1.1 ID=mRNA_D-mesarthrocarpus_Contig10496.1.1|Name=mRNA_D-mesarthrocarpus_Contig10496.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1851bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10496:517..3857- (Discosporangium mesarthrocarpum MT17_79)
ATGCTTGAGCAGATCTGGTTACTGCCTACGTTTCCCCTGTTGGGTTTTCT
CAGTCTGGTGCTGACTGCCGGCAAGCTGGGCAAGCGCAGCGTGGCAATTA
TCGGCGCGGGCTCGGTGGGCTTGTCGTTTCTGGTGGCTGCCAGTGCCGCC
GCAAGTTTCCTGGGCAGTGGCGAAGACTATTTTACCCAGCATCTCTGGAC
CTGGATGTCGGTAGGGGCATTCAATCCCGGATTCAGTTTCTATATTGACG
GCCTGACGGTGGTGATGATGCTGATCATTACCGGGGTCGGCTTTCTGATT
CATCTTTATTCCACCGGTTTCATGATTGACGACCCCAGCTACAGCCGGTT
CTTTGCCTATATGAACCTGTTCGTGGCGTCCATGCTGATGCTGGTCATGG
CGGACAATCTGGTGCTGCTGTATCTGGGCTGGGAAGGCGTCGGCCTGTGC
AGCTACCTGCTGATTGGCTTCTGGTATGAGAACTCCGCGAACGGCTATGC
GGCGCGCAAGGCCTTCGTGGTTACCCGGGTGGGCGATACCTCAATGGCCC
TGGGGCTGTTCCTGCTGTTTGCGCAACTGGGCACCCTGAATATCCAGGAC
ATGCTGCACGCGGCCGAAGCGCAGTGGGCGGTAGGATCCGGCCTGGCGGT
GGCGGCCTCACTGTTGTTACTGGGCGGTGCGGTGGGCAAATCGGCGCAGC
TACCGCTGCAGACCTGGCTGCCCGACGCCATGGCTGGCCCAACCCCAATC
AGCGCCCTGATTCACGCGGCCACCATGGTGACCGCCGGTGTGTACCTGAT
CGCGCGGACACACATCCTTTTCGAACTGGCGCCTTCGGTACAGGAGCTGG
TGGCCTGGATCGGTCTGGCAACGCTGCTGATGGCAGGCTTCACCGCCATG
ACCCAGCATGACATCAAACGAATCCTGGCCTATTCCACGATCAGTCAGAT
CGGCTACATGTTCCTCGGTCTGGGTGTAGGGGCCTGGTCGGCATCCATCT
TTCACCTGATGACCCACGCATTTTTCAAGGCGCTGCTGTTTCTTGGTGCC
GGTACGGTCATTCTCAGCCTTCATCATGAGCACGATATCTTCAAGATGGG
CGGCAAGCGCAAGCAGCTGCCGGTGGCTTTCCTGTCGTTCCTGATTGGCA
GTCTCGCCCTGGCGGCGTTTCCCTTTACCTCGGGCTACTTCAGCAAGGAT
GAAATATTGCTGGCCGCCCTGGAGCTGGAAGGCGTTGGCACCTGGCTGTG
GCTGGGCGGCGTGATCGGCGCATTCTTCACCGGTATCTACAGTTTCCGGC
TGGTGTTCGTGGTGTTTTTCGGTGCGAGCCGAGGTCATGACAACGAGCGC
GAGGAAGCCGGCTGGAATATGGCCGGCCCACTGTTTGTGTTGATGGTGCT
ATCCCTGCTGGGCGGCTTTATCAGCATCCCTGTTGATGCCGTATTCAATC
ATGGCGCCGAACACGAGGAGCATCATGTCAGTGCTCTGGTGCACGGCTTT
ATGATTGCGGTGCCACTGCTGGGTATTGCCATCAGTTATCTGTTTTATGG
CTCACGGACCCTGTCTATTGAGAAGCTGATGCACAGCTCCCTTGCTCAGT
CCCTGCACCGTTTCTGGTATTCCGGATGGGGTATGGATCGGCTCTACAAC
ACCCTGTTCGTTAATCCCTTTATGTGGCTGGCAAGACTCAACCGCAAGGA
TTTCATCGACTGGTGCTATGCCATGCTGGTGGAACTCACCCGGGCTGGTA
ACTCTCTGGTGGTGCGGGCACAAACCGGCTATCTGCGCTGGTACGCCCTG
AGTATTGCGATTGGCCTGGTTGTTGTTATTTCCCTGGGGGTAGTACTGTG
A
back to top