mRNA_D-mesarthrocarpus_Contig10493.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10493.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10493.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig10493.1.1 vs. uniprot
Match: A0A1B0DQI1_PHLPP (Uncharacterized protein n=1 Tax=Phlebotomus papatasi TaxID=29031 RepID=A0A1B0DQI1_PHLPP)

HSP 1 Score: 84.3 bits (207), Expect = 1.830e-18
Identity = 30/45 (66.67%), Postives = 36/45 (80.00%), Query Frame = 1 
Query:    4 CVACHSGGDEDKILLCDGCDKEFHTYCLDPPLKEVPEGQWYCVEC 138
            C  CHSG +EDK+LLCDGCDK FHTYC  P ++++PEG WYC EC
Sbjct:   28 CQFCHSGENEDKLLLCDGCDKGFHTYCFKPRMEKIPEGDWYCYEC 72
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BLAST of mRNA_D-mesarthrocarpus_Contig10493.1.1 vs. uniprot
Match: A0A4P9XZW7_9FUNG (JmjC domain, hydroxylase-domain-containing protein (Fragment) n=1 Tax=Piptocephalis cylindrospora TaxID=1907219 RepID=A0A4P9XZW7_9FUNG)

HSP 1 Score: 84.7 bits (208), Expect = 1.940e-18
Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = 1 
Query:    4 CVACHSGGDEDKILLCDGCDKEFHTYCLDPPLKEVPEGQWYCVEC 138
            CV CH   +ED++LLCDGCD+  HTYCLDPPLK VP G+WYC  C
Sbjct:    1 CVVCHGNLEEDRLLLCDGCDRPHHTYCLDPPLKHVPSGRWYCPHC 45
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BLAST of mRNA_D-mesarthrocarpus_Contig10493.1.1 vs. uniprot
Match: A0A7R9A5W7_9CRUS (Hypothetical protein n=1 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R9A5W7_9CRUS)

HSP 1 Score: 85.5 bits (210), Expect = 2.810e-18
Identity = 29/45 (64.44%), Postives = 36/45 (80.00%), Query Frame = 1 
Query:    4 CVACHSGGDEDKILLCDGCDKEFHTYCLDPPLKEVPEGQWYCVEC 138
            C  CHSG  ED++LLCDGCDK +HTYC  PP+K++P+G WYC EC
Sbjct: 1847 CQFCHSGDHEDQLLLCDGCDKGYHTYCFKPPMKDIPDGDWYCYEC 1891
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BLAST of mRNA_D-mesarthrocarpus_Contig10493.1.1 vs. uniprot
Match: A0A1B0CE26_LUTLO (Uncharacterized protein n=1 Tax=Lutzomyia longipalpis TaxID=7200 RepID=A0A1B0CE26_LUTLO)

HSP 1 Score: 84.3 bits (207), Expect = 7.160e-18
Identity = 30/45 (66.67%), Postives = 36/45 (80.00%), Query Frame = 1 
Query:    4 CVACHSGGDEDKILLCDGCDKEFHTYCLDPPLKEVPEGQWYCVEC 138
            C  CHSG +EDK+LLCDGCDK FHTYC  P ++++PEG WYC EC
Sbjct: 1102 CQFCHSGENEDKLLLCDGCDKGFHTYCFKPRMEKIPEGDWYCFEC 1146
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BLAST of mRNA_D-mesarthrocarpus_Contig10493.1.1 vs. uniprot
Match: A0A1B6DVT5_9HEMI (Uncharacterized protein (Fragment) n=2 Tax=Clastoptera arizonana TaxID=38151 RepID=A0A1B6DVT5_9HEMI)

HSP 1 Score: 82.4 bits (202), Expect = 1.100e-17
Identity = 28/45 (62.22%), Postives = 35/45 (77.78%), Query Frame = 1 
Query:    4 CVACHSGGDEDKILLCDGCDKEFHTYCLDPPLKEVPEGQWYCVEC 138
            C  CHSG +EDK+LLCDGCDK +HTYC  P ++ +P+G WYC EC
Sbjct:   80 CQFCHSGDNEDKLLLCDGCDKGYHTYCFKPKMENIPDGDWYCFEC 124
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BLAST of mRNA_D-mesarthrocarpus_Contig10493.1.1 vs. uniprot
Match: UPI001F4F8CC7 (bromodomain adjacent to zinc finger domain protein 2B-like n=2 Tax=Schistocerca TaxID=7008 RepID=UPI001F4F8CC7)

HSP 1 Score: 83.6 bits (205), Expect = 1.330e-17
Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = 1 
Query:    4 CVACHSGGDEDKILLCDGCDKEFHTYCLDPPLKEVPEGQWYCVEC 138
            C  CHSG +EDK+LLCDGCDK +HTYC  P ++ +PEG WYC EC
Sbjct: 2269 CQFCHSGDNEDKLLLCDGCDKGYHTYCFKPKMENIPEGDWYCFEC 2313
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BLAST of mRNA_D-mesarthrocarpus_Contig10493.1.1 vs. uniprot
Match: UPI00094EC1A8 (serine/arginine repetitive matrix protein 2-like n=1 Tax=Dendroctonus ponderosae TaxID=77166 RepID=UPI00094EC1A8)

HSP 1 Score: 83.6 bits (205), Expect = 1.330e-17
Identity = 31/45 (68.89%), Postives = 35/45 (77.78%), Query Frame = 1 
Query:    4 CVACHSGGDEDKILLCDGCDKEFHTYCLDPPLKEVPEGQWYCVEC 138
            C  C S GDED++LLCDGCD  FH YCL+PPL EVPEG WYC +C
Sbjct:  253 CEICGSSGDEDRMLLCDGCDLGFHLYCLEPPLAEVPEGSWYCSQC 297
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BLAST of mRNA_D-mesarthrocarpus_Contig10493.1.1 vs. uniprot
Match: A0A1B6G665_9HEMI (Uncharacterized protein n=11 Tax=Proconiini TaxID=565685 RepID=A0A1B6G665_9HEMI)

HSP 1 Score: 83.6 bits (205), Expect = 1.330e-17
Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = 1 
Query:    4 CVACHSGGDEDKILLCDGCDKEFHTYCLDPPLKEVPEGQWYCVEC 138
            C  CHSG +EDK+LLCDGCDK +HTYC  P ++ +PEG WYC EC
Sbjct: 1681 CQFCHSGDNEDKLLLCDGCDKGYHTYCFKPKMENIPEGDWYCYEC 1725
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BLAST of mRNA_D-mesarthrocarpus_Contig10493.1.1 vs. uniprot
Match: A0A2A2KUX0_9BILA (Uncharacterized protein n=1 Tax=Diploscapter pachys TaxID=2018661 RepID=A0A2A2KUX0_9BILA)

HSP 1 Score: 83.6 bits (205), Expect = 1.340e-17
Identity = 29/45 (64.44%), Postives = 36/45 (80.00%), Query Frame = 1 
Query:    4 CVACHSGGDEDKILLCDGCDKEFHTYCLDPPLKEVPEGQWYCVEC 138
            C  C +G DE +ILLCDGCDK FHTYCLDPP++ +P G+WYC +C
Sbjct:  100 CEICETGSDEHQILLCDGCDKGFHTYCLDPPIETIPRGRWYCPDC 144
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BLAST of mRNA_D-mesarthrocarpus_Contig10493.1.1 vs. uniprot
Match: UPI001D08830B (bromodomain adjacent to zinc finger domain protein 2B isoform X1 n=12 Tax=Chrysoperla carnea TaxID=189513 RepID=UPI001D08830B)

HSP 1 Score: 83.2 bits (204), Expect = 1.820e-17
Identity = 28/45 (62.22%), Postives = 36/45 (80.00%), Query Frame = 1 
Query:    4 CVACHSGGDEDKILLCDGCDKEFHTYCLDPPLKEVPEGQWYCVEC 138
            C  CHSG +EDK+LLCDGCDK +HTYC  P ++++P+G WYC EC
Sbjct: 2261 CQFCHSGDNEDKLLLCDGCDKGYHTYCFKPKMEQIPDGDWYCFEC 2305
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10493.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1B0DQI1_PHLPP1.830e-1866.67Uncharacterized protein n=1 Tax=Phlebotomus papata... [more]
A0A4P9XZW7_9FUNG1.940e-1866.67JmjC domain, hydroxylase-domain-containing protein... [more]
A0A7R9A5W7_9CRUS2.810e-1864.44Hypothetical protein n=1 Tax=Darwinula stevensoni ... [more]
A0A1B0CE26_LUTLO7.160e-1866.67Uncharacterized protein n=1 Tax=Lutzomyia longipal... [more]
A0A1B6DVT5_9HEMI1.100e-1762.22Uncharacterized protein (Fragment) n=2 Tax=Clastop... [more]
UPI001F4F8CC71.330e-1764.44bromodomain adjacent to zinc finger domain protein... [more]
UPI00094EC1A81.330e-1768.89serine/arginine repetitive matrix protein 2-like n... [more]
A0A1B6G665_9HEMI1.330e-1764.44Uncharacterized protein n=11 Tax=Proconiini TaxID=... [more]
A0A2A2KUX0_9BILA1.340e-1764.44Uncharacterized protein n=1 Tax=Diploscapter pachy... [more]
UPI001D08830B1.820e-1762.22bromodomain adjacent to zinc finger domain protein... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10493contigD-mesarthrocarpus_Contig10493:507..1362 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog227086.JGI_V11_45267
PFAMsARID,JmjC,JmjN,PHD,PLU-1,zf-C5HC2
Model size138
Max annot lvl2759|Eukaryota
KEGG koko:K11446
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0000122,GO:0000976,GO:0001046,GO:0001047,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003690,GO:0003700,GO:0003712,GO:0003713,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006325,GO:0006355,GO:0006357,GO:0006464,GO:0006482,GO:0006807,GO:0006996,GO:0007623,GO:0008150,GO:0008152,GO:0008214,GO:0008270,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010639,GO:0016043,GO:0016569,GO:0016570,GO:0016577,GO:0019219,GO:0019222,GO:0019538,GO:0031056,GO:0031057,GO:0031063,GO:0031064,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031399,GO:0031400,GO:0031490,GO:0032268,GO:0032269,GO:0032451,GO:0032452,GO:0032453,GO:0032501,GO:0032922,GO:0032991,GO:0032993,GO:0033043,GO:0033044,GO:0034647,GO:0034648,GO:0034720,GO:0034721,GO:0035064,GO:0036211,GO:0042393,GO:0043086,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043565,GO:0044092,GO:0044212,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0046872,GO:0046914,GO:0048511,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051090,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051336,GO:0051346,GO:0060255,GO:0065007,GO:0065009,GO:0070076,GO:0070988,GO:0071704,GO:0071840,GO:0080090,GO:0090311,GO:0097159,GO:0140030,GO:0140034,GO:0140096,GO:0140110,GO:1901363,GO:1901564,GO:1901725,GO:1901726,GO:1902275,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1905268,GO:1990837,GO:2000112,GO:2000113,GO:2001141,GO:2001251
Exons2
Evalue4.98e-21
EggNOG OGsCOG0055@1|root,KOG1246@2759|Eukaryota
Descriptionhistone lysine demethylation
Cds size138
COG categoryC
BRITEko00000,ko01000,ko01009,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789185.9810548-CDS-D-mesarthrocarpus_Contig10493:506..5391680789185.9810548-CDS-D-mesarthrocarpus_Contig10493:506..539Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10493 507..539 -
1680789185.9977124-CDS-D-mesarthrocarpus_Contig10493:1257..13621680789185.9977124-CDS-D-mesarthrocarpus_Contig10493:1257..1362Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10493 1258..1362 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10493.1.1prot_D-mesarthrocarpus_Contig10493.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10493 507..1362 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10493.1.1

>prot_D-mesarthrocarpus_Contig10493.1.1 ID=prot_D-mesarthrocarpus_Contig10493.1.1|Name=mRNA_D-mesarthrocarpus_Contig10493.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=46bp
GCVACHSGGDEDKILLCDGCDKEFHTYCLDPPLKEVPEGQWYCVEC
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mRNA from alignment at D-mesarthrocarpus_Contig10493:507..1362-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10493.1.1 ID=mRNA_D-mesarthrocarpus_Contig10493.1.1|Name=mRNA_D-mesarthrocarpus_Contig10493.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=856bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10493:507..1362- (Discosporangium mesarthrocarpum MT17_79)
GGATGTGTGGCTTGCCACAGCGGGGGGGATGAGGACAAAATCCTCCTCTG
CGACGGGTGTGACAAGGAGTTCCACACCTACTGCCTGGACCCTCCCCTCA
AAGAGGTGAGGTCAGGGGGGGTGTTGTGGTTCCGCTAGGATGGCATGGCA
TTCATCCTGGCATGGTTCCCTTGAAATGCTTTTTTGAATGGTCAAACGAT
GAAAGCATTGGAGTGCTTCGTCTCTCTGCGGGGTAGGGTTAGGGTTTAGG
GTTTAGGCTTAGGGTTAGGCTTAGGGTTAGGCTTAGGGTTAGGCTTAGGG
TTAGGCTTAGGGTTAGGCTTAGGGTTAGGCTTAGGGTTAGGCTTAGGGTT
AGGCTTAGGGTTAGGCTTAGGGTTAGGCTTAGGGTTAGGTATGAAGCTAC
GCTGTGGGTCGGAAGGATGGATGGCCAAGGCTTCATGCTCTTGATTGAGG
TCAAACAAGCTCGTGCCCCAGCCCAACACATTGGGATGTCCTCAATTAGT
TTCTTTTTCTGGGGTTTGGGAGGCATGTATGAGGGGTGCGGTGAGGCACG
GTGGTAACCCTATTGTGTTTCTCACTCTTGTCCCGTAAGTATGGTATGTA
CACATCTACTGGACCGGATGGAAAGGTGCAATGCTGTATTGTTATTATGA
TGATTGGTACTTGTTTGATAATGTCAATCCTGTTGTCAAAGGATAAGGGA
GAAACACCAGAAAAAGATGAGAAAAATTTGCAGAGGTCTGTCACAGACTG
ACTGGCTGGCTCATGTGTCCTTTTTTTCTGGTGATTGATGCTCGGTTGGG
CCCTGTGCCGGGGTGGGGTTAAGGTTCCAGAAGGCCAGTGGTACTGCGTG
GAGTGC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10493:507..1362-

>mRNA_D-mesarthrocarpus_Contig10493.1.1 ID=mRNA_D-mesarthrocarpus_Contig10493.1.1|Name=mRNA_D-mesarthrocarpus_Contig10493.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=138bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10493:507..1362- (Discosporangium mesarthrocarpum MT17_79)
GGATGTGTGGCTTGCCACAGCGGGGGGGATGAGGACAAAATCCTCCTCTG
CGACGGGTGTGACAAGGAGTTCCACACCTACTGCCTGGACCCTCCCCTCA
AAGAGGTTCCAGAAGGCCAGTGGTACTGCGTGGAGTGC
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