mRNA_D-mesarthrocarpus_Contig10490.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10490.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10490.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10490.1.1 vs. uniprot
Match: A0A2E8XP49_9PROT (Cobaltochelatase subunit CobT n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E8XP49_9PROT)

HSP 1 Score: 843 bits (2177), Expect = 5.850e-302
Identity = 455/619 (73.51%), Postives = 511/619 (82.55%), Query Frame = 1
Query:   19 DGPIEAFRRVTGAAMRAMSREPELTVNFSPDSQHVQGNDVHLPLPSRDLPYEEVSVIRGEADAISLRRRHHDTTLHAEKAPQAVAASALFEAVEQARVEAIGARRMAGVAANLEAALEEKSRVRGFARVTEREQVPIAEAVGMLTREVLTGSPPPPSARHMVDLWRPYIESRIGHGLESLVDYIDDQAAFADLIRQLISDLGMSDEQMAAEPDAQDSQGDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDLQPGSGDEDPDSPGQPWRPPEFLHNQPETEAYKAFSVEFDEVVDAEELCDPDELSRLRQQLDQQLGHLQSVISRLANRLQRRLMAKQTRSWEFDLEEGMLDTARLSRVVTSPGHPLSYKMELDTNFRDTVVTLLLDNSGSMRGRPITVAAMSADILARTLERCGVKVEILGFTTRAWKGGQSREKWLTAGKPGNPGRLNDLRHIVYKSADAPWRRVRKNLGLMLREGLLKENIDGEALLWAHDRLLGRPEQRRILMIVSDGAPVDDSTLSVNAGNYLERHLRRVIDWIETRSPVELLAIGIGHDVTRYYKRAVTIVDAEQLGGTVMDQLAELFEEDED-AGSRPKKRGGRAA 1872
            DGP+E FRRVT AAMRAM+REPELTV+F+PD   V G +  LPLPSRDLP ++VS++RGEADA++LR RHH+  LH E  P A AA  L++AVEQARVEAIGARRMAGVA NL AALE + R +GFAR+T+REQ P+AEAV +L RE LTG+ PPPSAR MVDLWRP+IE +IG     L D +DDQ AF D+IR++ISDLG+++E+ AAEPDA DS GDD    XXXXXXXXXXXXX                        XXX          DPD+PGQPWRPPE+ HNQ E   Y AF+ E DE+V+A+ELCDPDELSRLRQQLDQQLGHLQSVISRLANRLQRRLMAKQTR+WEFDLEEG+LDTARL+RVVT+P HPLS+KME DT+FRDTVVTLL+DNSGSMRGRPI+VAAMSADILARTLERCGVKVEILGFTTRAWKGGQ+RE WL AGKP NPGRLNDLRHI+YKSADAPWRR RKNLGLMLREGLLKENIDGEAL WAH+RLLGR EQRRILMI+SDGAPVDDSTLSVNAGNYLERHLR++I+WIE  SPVELLAIGIGHDVTRYY+RAVTIVDAEQLGGTVMDQLAELF+E+    GSRP+ R  R A
Sbjct:   10 DGPVEEFRRVTAAAMRAMAREPELTVSFTPDQPGVAGAEARLPLPSRDLPADDVSIVRGEADALALRLRHHNDELHGESVPTAPAARELYDAVEQARVEAIGARRMAGVADNLSAALEMRCRDKGFARITQREQAPVAEAVALLVREALTGAAPPPSARQMVDLWRPFIEPKIGPAFADLDDSLDDQEAFQDVIRRMISDLGLAEEEFAAEPDADDSTGDDQEDAXXXXXXXXXXXXXARAMDGDGEEEAGADGEEVEMPMEXXXXXXXXXXXXXDPDAPGQPWRPPEYGHNQGEQFVYGAFTTEHDEIVEADELCDPDELSRLRQQLDQQLGHLQSVISRLANRLQRRLMAKQTRNWEFDLEEGLLDTARLTRVVTNPAHPLSFKMEEDTDFRDTVVTLLIDNSGSMRGRPISVAAMSADILARTLERCGVKVEILGFTTRAWKGGQARESWLAAGKPANPGRLNDLRHIIYKSADAPWRRARKNLGLMLREGLLKENIDGEALQWAHNRLLGRSEQRRILMIISDGAPVDDSTLSVNAGNYLERHLRQIIEWIENYSPVELLAIGIGHDVTRYYRRAVTIVDAEQLGGTVMDQLAELFDEEGGFQGSRPQGRARRVA 628          
BLAST of mRNA_D-mesarthrocarpus_Contig10490.1.1 vs. uniprot
Match: A0A2E7I5X0_9PROT (Cobaltochelatase subunit CobT n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E7I5X0_9PROT)

HSP 1 Score: 826 bits (2133), Expect = 2.950e-295
Identity = 475/619 (76.74%), Postives = 539/619 (87.08%), Query Frame = 1
Query:   13 SQDGPIEAFRRVTGAAMRAMSREPELTVNFSPDSQHVQGNDVHLPLPSRDLPYEEVSVIRGEADAISLRRRHHDTTLHAEKAPQAVAASALFEAVEQARVEAIGARRMAGVAANLEAALEEKSRVRGFARVTEREQVPIAEAVGMLTREVLTGSPPPPSARHMVDLWRPYIESRIGHGLESLVDYIDDQAAFADLIRQLISDLGMSDEQMAAEPDAQDSQGDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDLQPGSG-DEDPDSPGQPWRPPEFLHNQPETEAYKAFSVEFDEVVDAEELCDPDELSRLRQQLDQQLGHLQSVISRLANRLQRRLMAKQTRSWEFDLEEGMLDTARLSRVVTSPGHPLSYKMELDTNFRDTVVTLLLDNSGSMRGRPITVAAMSADILARTLERCGVKVEILGFTTRAWKGGQSREKWLTAGKPGNPGRLNDLRHIVYKSADAPWRRVRKNLGLMLREGLLKENIDGEALLWAHDRLLGRPEQRRILMIVSDGAPVDDSTLSVNAGNYLERHLRRVIDWIETRSPVELLAIGIGHDVTRYYKRAVTIVDAEQLGGTVMDQLAELFEEDEDAGSRPKKRGGR 1866
            S DGP+E FRRVT AAMRAM+ EPELTV+F+PD   + G +V LPLP+RDLP E+V V+RGEADA++LR RHH+  LH  + P A AA AL++AVEQARVEAIGA RM+GVA NL AA E +SR +GFARVT+R+Q P++EAV ML RE LTG+PPPPSAR MV++WRP+IES+IG  L  L D +DDQ AF D+IRQ+ISDLG+++E++A EPD+ D+ G  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         DEDPD+PGQPWRPPE+ HNQ E   Y A++ E DE+V+A++LCDPDELSRLRQQLDQQLGHLQS+IS+LANRLQRRLMAKQTR+WEFDLEEG+LDTARL+RVVT+P HPLS+KME DTNFRDTVVTLL+DNSGSMRGRPI+VAAMSADILARTLERCGVKVEILGFTTRAWKGGQSREKWL A KP N GRLNDLRHI+YKSADAPWRR RKNLGLMLREGLLKENIDGEALLWAH+RLL R EQRRILMI+SDGAPVDDSTLSVNAGNYLERHLR+VI+ IET SP+ELLAIGIGHDVTRYY+RAVTIVDAEQLGGTVMDQLAELF+E++D     K R GR
Sbjct:    8 SNDGPVEEFRRVTAAAMRAMACEPELTVSFTPDPPSISGEEVRLPLPARDLPAEDVGVVRGEADALALRHRHHNAELHQARVPSAPAARALYDAVEQARVEAIGANRMSGVADNLSAAHEMRSRNKGFARVTQRDQAPVSEAVAMLAREALTGTPPPPSARPMVNVWRPFIESKIGAALSDLSDCLDDQTAFQDVIRQMISDLGLAEEELATEPDSDDNSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEDPDAPGQPWRPPEYGHNQGEQFIYDAYTTEHDEIVEAQDLCDPDELSRLRQQLDQQLGHLQSLISKLANRLQRRLMAKQTRNWEFDLEEGLLDTARLTRVVTNPAHPLSFKMEEDTNFRDTVVTLLIDNSGSMRGRPISVAAMSADILARTLERCGVKVEILGFTTRAWKGGQSREKWLAASKPANAGRLNDLRHIIYKSADAPWRRARKNLGLMLREGLLKENIDGEALLWAHNRLLARSEQRRILMIISDGAPVDDSTLSVNAGNYLERHLRQVIEHIETYSPIELLAIGIGHDVTRYYRRAVTIVDAEQLGGTVMDQLAELFDEEDDIFQ--KSRRGR 624          
BLAST of mRNA_D-mesarthrocarpus_Contig10490.1.1 vs. uniprot
Match: A0A848WC15_9PROT (Cobaltochelatase subunit CobT n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A848WC15_9PROT)

HSP 1 Score: 806 bits (2083), Expect = 9.750e-288
Identity = 444/622 (71.38%), Postives = 505/622 (81.19%), Query Frame = 1
Query:    1 MASNSQDGPIEAFRRVTGAAMRAMSREPELTVNFSPDSQHVQGNDVHLPLPSRDLPYEEVSVIRGEADAISLRRRHHDTTLHAEKAPQAVAASALFEAVEQARVEAIGARRMAGVAANLEAALEEKSRVRGFARVTEREQVPIAEAVGMLTREVLTGSPPPPSARHMVDLWRPYIESRIGHGLESLVDYIDDQAAFADLIRQLISDLGMSDEQM--AAEPDAQDSQGDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDLQPGSGDEDPDSPGQPWRPPEFLHNQPETEAYKAFSVEFDEVVDAEELCDPDELSRLRQQLDQQLGHLQSVISRLANRLQRRLMAKQTRSWEFDLEEGMLDTARLSRVVTSPGHPLSYKMELDTNFRDTVVTLLLDNSGSMRGRPITVAAMSADILARTLERCGVKVEILGFTTRAWKGGQSREKWLTAGKPGNPGRLNDLRHIVYKSADAPWRRVRKNLGLMLREGLLKENIDGEALLWAHDRLLGRPEQRRILMIVSDGAPVDDSTLSVNAGNYLERHLRRVIDWIETRSPVELLAIGIGHDVTRYYKRAVTIVDAEQLGGTVMDQLAELFEEDEDAGSRPKKRG 1860
            MA  + DGPIE FRRVT AAMRA++R PEL+VNF+PD   + G++  LPLPSRDLPY+EV V+RGE+D+++LR+R+HD  LH+++ P   AA AL+E VEQ RVE+IGA  MAGVA NL+AALE+  R +GFARVTER+QV IA+AVG+L RE +TG  PPPSAR MVDLWRP+IES+IG  LE L   + DQA F D++RQ+ISDLG +D++M  A EPD  D +  D  XXXXX                       XXXXXXXXXXXXXX            D+PG PWRPP+ LHNQ     Y AF+ EFDEVV+A+ELCD DEL RLRQQLDQQ+GHLQSVISRLANRLQRRLMAKQTRSW+FDLEEG+LDT RLSRVVT+P HPLS+K E DTNFRDTVV+LL+DNSGSMRGRPI+VAAMSADILARTLERCGVKVEILGFTTRAWKGGQSREKWL AGKP  PGRLNDLRHIVYKSADAPWRR RKNLGLMLREGLLKENIDGEAL+WAHDRLL R EQRRIL+I+SDGAPVDDSTLSVNAGNYLERHLR+VI++IET SPVELLAIGIGHDVTRYY+RAVTIVDAEQLGGTVMDQLAELFEE++     P+ RG
Sbjct:    1 MAKGNNDGPIEEFRRVTAAAMRAIARNPELSVNFTPDPASLHGDEARLPLPSRDLPYDEVCVVRGESDSLALRQRYHDPVLHSQRMPATAAAQALYETVEQVRVESIGAEHMAGVANNLDAALEDHCRTKGFARVTERDQVSIADAVGLLAREAITGRQPPPSARQMVDLWRPFIESKIGPTLEDLGKNLHDQAHFQDVVRQIISDLGFADDEMNNAPEPDEADGENQDSAXXXXXGEGDSEGEAAATDGAGEEQEGDEXXXXXXXXXXXXXXXXXXXXXXXXX-DAPGSPWRPPDNLHNQANKFVYSAFTTEFDEVVEADELCDADELGRLRQQLDQQIGHLQSVISRLANRLQRRLMAKQTRSWDFDLEEGLLDTGRLSRVVTNPTHPLSFKQEKDTNFRDTVVSLLIDNSGSMRGRPISVAAMSADILARTLERCGVKVEILGFTTRAWKGGQSREKWLGAGKPSGPGRLNDLRHIVYKSADAPWRRARKNLGLMLREGLLKENIDGEALVWAHDRLLARSEQRRILVIISDGAPVDDSTLSVNAGNYLERHLRQVIEYIETYSPVELLAIGIGHDVTRYYRRAVTIVDAEQLGGTVMDQLAELFEEED---GMPQGRG 618          
BLAST of mRNA_D-mesarthrocarpus_Contig10490.1.1 vs. uniprot
Match: A0A2S6QKP0_9PROT (Aerobic cobaltochelatase subunit CobT n=1 Tax=Alphaproteobacteria bacterium MarineAlpha12_Bin1 TaxID=2013107 RepID=A0A2S6QKP0_9PROT)

HSP 1 Score: 795 bits (2054), Expect = 2.570e-283
Identity = 445/625 (71.20%), Postives = 522/625 (83.52%), Query Frame = 1
Query:    1 MASNSQDGPIEAFRRVTGAAMRAMSREPELTVNFSPDSQHVQGNDVHLPLPSRDLPYEEVSVIRGEADAISLRRRHHDTTLHAEKAPQAVAASALFEAVEQARVEAIGARRMAGVAANLEAALEEKSRVRGFARVTEREQVPIAEAVGMLTREVLTGSPPPPSARHMVDLWRPYIESRIGHGLESLVDYIDDQAAFADLIRQLISDLGMSDEQMAAEPDAQDSQGDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDLQP-GSGDEDPDSPGQPWRPPEFLHNQPETEAYKAFSVEFDEVVDAEELCDPDELSRLRQQLDQQLGHLQSVISRLANRLQRRLMAKQTRSWEFDLEEGMLDTARLSRVVTSPGHPLSYKMELDTNFRDTVVTLLLDNSGSMRGRPITVAAMSADILARTLERCGVKVEILGFTTRAWKGGQSREKWLTAGKPGNPGRLNDLRHIVYKSADAPWRRVRKNLGLMLREGLLKENIDGEALLWAHDRLLGRPEQRRILMIVSDGAPVDDSTLSVNAGNYLERHLRRVIDWIETRSPVELLAIGIGHDVTRYYKRAVTIVDAEQLGGTVMDQLAELFEEDEDAGSRPKKRGGRAA 1872
            M   + DGP+E FRR+T AAMRA+ R  E++V FSPD    QGN+  LPLPSRDLP+EEVSV+RGE+D+I+L++R+H+ T+H ++ P    A  L++ VEQ RVE+IGA+ M GVA NL+AALEE+ R +GF+RVTEREQVPIAEAVG+L RE +TG  PPPSAR M+DLWRP+IES+ G  L  L   + DQA F D++R++I+DLG SD++M A  ++  ++G++   XXXXXXXXXXXXX        XXXXXXXXXXXXXXXXXXXX      GSG+EDP++PG PWRPP+  HNQ     YK F+ EFDE+V+A++LCD DEL+RLR QLDQQ+GHLQSVISRLANRLQRRLMAKQTRSW+FDLEEG+LDT RLSRVVT+P HPLS+K E DTNFRDTVVTLL+DNSGSMRGRPI+VAAMSADILARTLERCGVKVEILGFTTRAWKGGQSREKWL A KP +PGRLNDLRHI+YKSADAPWRR RKNLGLMLREGLLKENIDGEAL+WAH+RLL R EQRRIL+IVSDGAPVDDSTLSVNAGNYLERHLR+VI+WIET S +ELLAIGIGHDVTRYY+RAVTIVDAEQLGGTVMDQLAELFEE++ + +  + R  R A
Sbjct:    1 MVKGNNDGPVEEFRRITEAAMRAIGRNAEISVTFSPDPPSSQGNEARLPLPSRDLPHEEVSVVRGESDSIALKQRYHNPTIHNDRMPATSIAQELYDTVEQVRVESIGAKYMTGVANNLDAALEERCRSKGFSRVTEREQVPIAEAVGLLAREAITGRQPPPSARQMLDLWRPFIESKAGPVLNELEKSLYDQAKFQDVVRKIITDLGFSDDEMNASQESDGAEGENQESXXXXXXXXXXXXXDSSATDGTXXXXXXXXXXXXXXXXXXXXXXXXXXGSGEEDPEAPGSPWRPPDGTHNQANQFNYKVFTGEFDEIVEADDLCDHDELARLRLQLDQQIGHLQSVISRLANRLQRRLMAKQTRSWDFDLEEGLLDTGRLSRVVTNPTHPLSFKQEKDTNFRDTVVTLLIDNSGSMRGRPISVAAMSADILARTLERCGVKVEILGFTTRAWKGGQSREKWLAAAKPASPGRLNDLRHIIYKSADAPWRRARKNLGLMLREGLLKENIDGEALIWAHERLLARSEQRRILVIVSDGAPVDDSTLSVNAGNYLERHLRQVIEWIETYSQIELLAIGIGHDVTRYYRRAVTIVDAEQLGGTVMDQLAELFEEEDSSLNTNQPRRKRIA 625          
BLAST of mRNA_D-mesarthrocarpus_Contig10490.1.1 vs. uniprot
Match: A0A2E3XCV1_9PROT (Cobaltochelatase subunit CobT n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E3XCV1_9PROT)

HSP 1 Score: 783 bits (2021), Expect = 2.650e-278
Identity = 451/619 (72.86%), Postives = 522/619 (84.33%), Query Frame = 1
Query:    1 MASNSQDGPIEAFRRVTGAAMRAMSREPELTVNFSPDSQHVQGNDVHLPLPSRDLPYEEVSVIRGEADAISLRRRHHDTTLHAEKAPQAVAASALFEAVEQARVEAIGARRMAGVAANLEAALEEKSRVRGFARVTEREQVPIAEAVGMLTREVLTGSPPPPSARHMVDLWRPYIESRIGHGLESLVDYIDDQAAFADLIRQLISDLGMSDEQMAAEPDAQDSQGDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDLQPGSGD-EDPDSPGQPWRPPEFLHNQPETEAYKAFSVEFDEVVDAEELCDPDELSRLRQQLDQQLGHLQSVISRLANRLQRRLMAKQTRSWEFDLEEGMLDTARLSRVVTSPGHPLSYKMELDTNFRDTVVTLLLDNSGSMRGRPITVAAMSADILARTLERCGVKVEILGFTTRAWKGGQSREKWLTAGKPGNPGRLNDLRHIVYKSADAPWRRVRKNLGLMLREGLLKENIDGEALLWAHDRLLGRPEQRRILMIVSDGAPVDDSTLSVNAGNYLERHLRRVIDWIETRSPVELLAIGIGHDVTRYYKRAVTIVDAEQLGGTVMDQLAELFEEDEDAGSRPKK 1854
            M   S DGPIE FRR+T A+MRA+S+  EL+V FSPD   +QG++  LPLPSRDLPYEEV V+RGE+D+++LR+RHH+  +H E+ P    A +L++A EQ RVE+IGA+RMAGVA NLEAAL+++   RG+ RVTER+QVPI+EAV +L REV+TG  PP +AR MVDLWRPYIES+ G  L+ L   ++DQ  F D+++++I+DLG SD+ ++            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          EDPD+PG PWRPP+ LHNQ     Y AF+ EFDE+VDA++LCDPDEL RLRQQLDQQ+GHLQSVISRLANRLQRRLMAKQTRSW+FDLEEG+LDT RLSRVVT+P  PLS+K E DTNFRDTVVTLL+DNSGSMRGRPI+VAAMSADILARTLERCGVKVEILGFTTRAWKGGQ+REKWL A KP +PGRLNDLRHIVYKSADAPWRR RKNLGLMLREGLLKENIDGEAL+WAH+RLL R EQRRIL+I+SDGAPVDDSTLSVNAGNYLERHLR+VI+WIE+ SPVELLAIGIGHDVTRYY+RAVTIVDAEQLGGTVMDQLAELFEE ++   RP++
Sbjct:    1 MVKGSNDGPIEEFRRITAASMRAISQNAELSVTFSPDPPXLQGDEARLPLPSRDLPYEEVCVVRGESDSLALRQRHHNPKIHNERMPATAEAKSLYDAFEQVRVESIGAQRMAGVANNLEAALDDRCVTRGYNRVTERDQVPISEAVALLAREVITGRQPPFNARKMVDLWRPYIESKTGEMLQDLAKNLNDQLKFQDVVKKIINDLGFSDDDLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDPDAPGSPWRPPDNLHNQTNQFIYSAFTNEFDEIVDADDLCDPDELGRLRQQLDQQIGHLQSVISRLANRLQRRLMAKQTRSWDFDLEEGLLDTGRLSRVVTNPTQPLSFKQEKDTNFRDTVVTLLIDNSGSMRGRPISVAAMSADILARTLERCGVKVEILGFTTRAWKGGQAREKWLAASKPSSPGRLNDLRHIVYKSADAPWRRSRKNLGLMLREGLLKENIDGEALVWAHERLLARSEQRRILVIISDGAPVDDSTLSVNAGNYLERHLRQVIEWIESYSPVELLAIGIGHDVTRYYRRAVTIVDAEQLGGTVMDQLAELFEEKDELSVRPQR 619          
BLAST of mRNA_D-mesarthrocarpus_Contig10490.1.1 vs. uniprot
Match: UPI001A96BB78 (cobaltochelatase subunit CobT n=1 Tax=Azospirillum sp. SYSU D00513 TaxID=2812561 RepID=UPI001A96BB78)

HSP 1 Score: 717 bits (1852), Expect = 1.040e-252
Identity = 378/624 (60.58%), Postives = 465/624 (74.52%), Query Frame = 1
Query:   16 QDGPIEAFRRVTGAAMRAMSREPELTVNFSPDSQHVQGNDVHLPLPSRDLPYEEVSVIRGEADAISLRRRHHDTTLHAEKAPQAVAASALFEAVEQARVEAIGARRMAGVAANLEAALEEKSRVRGFARVTEREQVPIAEAVGMLTREVLTGSPPPPSARHMVDLWRPYIESRIGHGLESLVDYIDDQAAFADLIRQLISDL----GMSDEQ------------MAAEPDAQDSQGDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDLQPGSGDEDPDSPGQPWRPPEFLHNQPETEAYKAFSVEFDEVVDAEELCDPDELSRLRQQLDQQLGHLQSVISRLANRLQRRLMAKQTRSWEFDLEEGMLDTARLSRVVTSPGHPLSYKMELDTNFRDTVVTLLLDNSGSMRGRPITVAAMSADILARTLERCGVKVEILGFTTRAWKGGQSREKWLTAGKPGNPGRLNDLRHIVYKSADAPWRRVRKNLGLMLREGLLKENIDGEALLWAHDRLLGRPEQRRILMIVSDGAPVDDSTLSVNAGNYLERHLRRVIDWIETRSPVELLAIGIGHDVTRYYKRAVTIVDAEQLGGTVMDQLAELFEEDEDAG 1839
            ++ P+EAF+R T A +RAM+R PE+ V FS +   V G  V +P+P+RDL  ++V+++RG ADA+SLR RHHD+ +HA++ P + AA A F+A+EQAR EA+G+R MAGVAANLEAALEE+ R +GF +V ER QVP+ E + ++ RE+LTG+PPPP+A   V+LWRP+IE ++G  +  L  + DDQ A+A  +R+L++DL    G   EQ               EP    S+G D                                            GD   G G E+P  P QPWRP +   N  +  AYK F+ +FDEVVDA +LCDPDEL+RLR  LDQQL HLQ VIS+LANRLQRRLMAKQ RSWEFD+EEG+LD ARL+R+V +P  PLS+K E +TNFRDTVV+LL+DNSGSMRGRPI++AAMSADILARTLERC VKVE+LGFTTRAWKGGQ+RE+W++AGKP NPGRLNDLRHIVYK+ADAPWRR RKNLGLMLREG+LKENIDGEAL WA++RL+ RPEQRRILM++SDGAPVDDSTLSVNAGNYLERHLR+VI+ IETRSPVEL+AIGIGHDVTRYY+RAVTIVDAEQLGGT+M++LAELF+EDE  G
Sbjct:    4 RESPVEAFKRSTAATVRAMARRPEVQVGFSSEPSGVAGARVRVPVPARDLNPQDVAMLRGTADAVSLRLRHHDSAVHAQRTPLSDAARAAFDAMEQARYEALGSRHMAGVAANLEAALEERYRRQGFDQVQERGQVPLPEVLRLIARELLTGAPPPPTAAQAVELWRPWIEEKLGADMHGLAKWTDDQDAYARAVRRLLTDLDMEVGQEPEQPXXXXXXXXXXXXXXEPSDGQSRGTDESEQEARASSAPEMQQDEAGEGTDEGGSDGE-------------GDTGEGEGAEEPAGPSQPWRPDQSRRNDADPNAYKPFTTQFDEVVDAADLCDPDELARLRHMLDQQLQHLQGVISKLANRLQRRLMAKQQRSWEFDIEEGILDAARLARIVVNPVLPLSFKREQETNFRDTVVSLLIDNSGSMRGRPISIAAMSADILARTLERCAVKVEVLGFTTRAWKGGQAREQWISAGKPANPGRLNDLRHIVYKAADAPWRRSRKNLGLMLREGILKENIDGEALQWAYNRLMARPEQRRILMVISDGAPVDDSTLSVNAGNYLERHLRQVIEQIETRSPVELVAIGIGHDVTRYYRRAVTIVDAEQLGGTMMNKLAELFDEDERRG 614          
BLAST of mRNA_D-mesarthrocarpus_Contig10490.1.1 vs. uniprot
Match: A0A3N1LK81_9PROT (Cobaltochelatase CobT subunit n=1 Tax=Stella humosa TaxID=94 RepID=A0A3N1LK81_9PROT)

HSP 1 Score: 714 bits (1842), Expect = 3.670e-251
Identity = 391/624 (62.66%), Postives = 461/624 (73.88%), Query Frame = 1
Query:    1 MASNSQDGPIEAFRRVTGAAMRAMSREPELTVNFSPDSQHVQGNDVHLPLPSRDLPYEEVSVIRGEADAISLRRRHHDTTLHAEKAPQAVAASALFEAVEQARVEAIGARRMAGVAANLEAALEEKSRVRGFARVTEREQVPIAEAVGMLTREVLTGSPPPPSARHMVDLWRPYIESRIGHGLESLVDYIDDQAAFADLIRQLISDLGMSDEQMAAEPDAQDSQGDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDLQPGSGDEDPDSPGQPWRPPEFLHNQPETEAYKAFSVEFDEVVDAEELCDPDELSRLRQQLDQQLGHLQSVISRLANRLQRRLMAKQTRSWEFDLEEGMLDTARLSRVVTSPGHPLSYKMELDTNFRDTVVTLLLDNSGSMRGRPITVAAMSADILARTLERCGVKVEILGFTTRAWKGGQSREKWLTAGKPGNPGRLNDLRHIVYKSADAPWRRVRKNLGLMLREGLLKENIDGEALLWAHDRLLGRPEQRRILMIVSDGAPVDDSTLSVNAGNYLERHLRRVIDWIETRSPVELLAIGIGHDVTRYYKRAVTIVDAEQLGGTVMDQLAELFEEDEDAGSRPKKRGGRAA 1872
            M     + P+EAF+R T + +RA++   ++ V FS D     G    +PLPSRDLP EE + +RG ADAI+LR RHHD  LHA++AP +  A  +F+AVEQARVEAIGARRM GVA NL AAL+E+ R +GF R+TER  V +A+AV +L RE LTG PPP SAR +VDLWRP++E++ G  L +L  +++DQ  F   +R+LI+DL +                        XXXXXXXXXXX                           G++ PG+GD+DP+ PG+P + P  +        YKA++  FDE V A+ LCD DELSRLR  LDQQL HLQ VI +LANRLQRRLMAKQTRSWEFDLEEG+LD ARLSRV+T+P  PLS+K ELDT+FRDTVVTLL+DNSGSMRGRPITVAAMSADILARTLERC VKVEILGFTTRAWKGGQ+RE+W+  GKP NPGRLNDLRHI+YK ADAPWRR RKNLGLMLREG+LKENIDGEAL+WAH RL+GR EQRRILM++SDGAPVDDSTLSVN GNYLE+HLR  ID+IETRSPVEL+AIGIGHDVTRYYKRAVTIVDAEQLGGT+ D+LAELF  DED  SR   RG RAA
Sbjct:    1 MTQGKAETPLEAFKRSTASTLRAIAERDDVNVVFSSDPPGAAGTRARVPLPSRDLPAEEAAQVRGAADAIALRYRHHDARLHAKRAPPSELARTIFDAVEQARVEAIGARRMTGVAGNLAAALDERYRRQGFDRITERTDVTMADAVRLLAREQLTGEPPPESARRVVDLWRPWVEAKGGADLANLEKHLNDQEGFGQAVRKLIADLDLDLGDXXXXXXXXXXXXXQNDSADAXXXXXXXXXXXSGTQSTMEAAPGDPREDDSGAAAEEQDGEMMPGTGDDDPNRPGRPGQVPRPMWGDGAEATYKAYTTRFDETVLADALCDADELSRLRGLLDQQLAHLQGVIGKLANRLQRRLMAKQTRSWEFDLEEGILDAARLSRVITNPAIPLSFKQELDTDFRDTVVTLLIDNSGSMRGRPITVAAMSADILARTLERCAVKVEILGFTTRAWKGGQARERWIAEGKPANPGRLNDLRHIIYKPADAPWRRARKNLGLMLREGILKENIDGEALMWAHSRLIGRSEQRRILMVISDGAPVDDSTLSVNPGNYLEKHLREAIDYIETRSPVELVAIGIGHDVTRYYKRAVTIVDAEQLGGTMTDKLAELF--DEDGPSRRSGRGRRAA 622          
BLAST of mRNA_D-mesarthrocarpus_Contig10490.1.1 vs. uniprot
Match: A0A839SZ87_9HYPH (Cobaltochelatase CobT n=1 Tax=Limibacillus halophilus TaxID=1579333 RepID=A0A839SZ87_9HYPH)

HSP 1 Score: 712 bits (1837), Expect = 3.460e-250
Identity = 403/624 (64.58%), Postives = 482/624 (77.24%), Query Frame = 1
Query:    7 SNSQDGPIEAFRRVTGAAMRAMSREPELTVNFSPDSQHVQGNDVHLPLPSRDLPYEEVSVIRGEADAISLRRRHHDTTLHAEKAPQAVAASALFEAVEQARVEAIGARRMAGVAANLEAALEEKSRVRGFARVTEREQVPIAEAVGMLTREVLTGSPPPPSARHMVDLWRPYIESRIGHGLESLVDYIDDQAAFADLIRQLISDLGMSDEQMAAEPDAQDSQGDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDLQPGSGDEDPDSPGQPWRPPEF--LHNQPETEAYKAFSVEFDEVVDAEELCDPDELSRLRQQLDQQLGHLQSVISRLANRLQRRLMAKQTRSWEFDLEEGMLDTARLSRVVTSPGHPLSYKMELDTNFRDTVVTLLLDNSGSMRGRPITVAAMSADILARTLERCGVKVEILGFTTRAWKGGQSREKWLTAGKPGNPGRLNDLRHIVYKSADAPWRRVRKNLGLMLREGLLKENIDGEALLWAHDRLLGRPEQRRILMIVSDGAPVDDSTLSVNAGNYLERHLRRVIDWIETRSPVELLAIGIGHDVTRYYKRAVTIVDAEQLGGTVMDQLAELFEEDEDAGSRPKKRGGRAA 1872
            S   + PIE FRR TGA +RA++R  EL V F+P +Q +QGN+  +P+P RDL  E+V++ RGEADAI+LR+R+HD   HA  AP +  A  +F AVEQ R EA+GARRMAGV ANL A L+++ R RG+  +TERE  PI+E V +L RE +TG  PPP+AR +VDLWRP  +++    L+ + +  +DQAAFA + RQLI DL        ++PD        XXXXXXXXXXX                  XXXXXXXXXXXX    D +  +GD + D PG+P  PPEF    N P    Y+AF+ EFDEVV+AE+LCDPDEL+RLR  LDQQL HLQ VISRLANRLQRRLMAKQTR+WEF++EEG+LDTARL+R+V  P  PLS+K EL+T+FRDTVV+LL+DNSGSMRGRPI+VAA+SADILARTLERCGVKVEILGFTTR WKGGQSRE+W+ AGKP N GRLNDLRHIVYKSADAPWRR RKNLGLMLREG+LKENIDGEALLWAH+RLLGR EQR+ILM++SDGAPVDDSTLSVN GNYLE+HLR VID++ETRSPVE++AIGIGHDVTRYY+RAVTIVDAEQLGGT+M++LAELF  DE+ GSR  + G R A
Sbjct:   11 SGGGEAPIERFRRATGATLRAIARNAELQVAFAPHAQGLQGNEARVPMPGRDLSAEDVALTRGEADAIALRQRYHDAKNHARLAPSSQIAREIFNAVEQTRCEALGARRMAGVNANLGAMLQDRCRTRGYDHITEREDAPISEVVSLLAREAMTGEKPPPAARPIVDLWRPLFDAKAMGDLKQMAELAEDQAAFARMARQLIEDLDFDLGNSESDPDDPXXXXXXXXXXXXXXXXXGQSGDQQSSDAFDAMQEQXXXXXXXXXXXXSADADGEMMAGDSEED-PGRPGTPPEFDDRRNAPAEAPYRAFTTEFDEVVEAEDLCDPDELARLRMLLDQQLAHLQGVISRLANRLQRRLMAKQTRAWEFNIEEGLLDTARLARIVVDPTMPLSFKRELETDFRDTVVSLLIDNSGSMRGRPISVAAVSADILARTLERCGVKVEILGFTTRMWKGGQSRERWIAAGKPANAGRLNDLRHIVYKSADAPWRRARKNLGLMLREGILKENIDGEALLWAHNRLLGRSEQRKILMVISDGAPVDDSTLSVNPGNYLEKHLREVIDYMETRSPVEVIAIGIGHDVTRYYRRAVTIVDAEQLGGTLMEKLAELF--DEEGGSR--RAGPRGA 629          
BLAST of mRNA_D-mesarthrocarpus_Contig10490.1.1 vs. uniprot
Match: A0A1Y6BX44_9HYPH (Cobaltochelatase CobT subunit n=1 Tax=Tistlia consotensis USBA 355 TaxID=560819 RepID=A0A1Y6BX44_9HYPH)

HSP 1 Score: 708 bits (1828), Expect = 4.710e-249
Identity = 382/619 (61.71%), Postives = 479/619 (77.38%), Query Frame = 1
Query:   25 PIEAFRRVTGAAMRAMSREPELTVNFSPDSQHVQGNDVHLPLPSRDLPYEEVSVIRGEADAISLRRRHHDTTLHAEKAPQAVAASALFEAVEQARVEAIGARRMAGVAANLEAALEEKSRVRGFARVTEREQVPIAEAVGMLTREVLTGSPPPPSARHMVDLWRPYIESRIGHGLESLVDYIDDQAAFADLIRQLISDL---GMSDEQMAAEPDAQDSQGDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDLQPGSGDEDPDSPGQPWRPPEFLHNQPETEAYKAFSVEFDEVVDAEELCDPDELSRLRQQLDQQLGHLQSVISRLANRLQRRLMAKQTRSWEFDLEEGMLDTARLSRVVTSPGHPLSYKMELDTNFRDTVVTLLLDNSGSMRGRPITVAAMSADILARTLERCGVKVEILGFTTRAWKGGQSREKWLTAGKPGNPGRLNDLRHIVYKSADAPWRRVRKNLGLMLREGLLKENIDGEALLWAHDRLLGRPEQRRILMIVSDGAPVDDSTLSVNAGNYLERHLRRVIDWIETRSPVELLAIGIGHDVTRYYKRAVTIVDAEQLGGTVMDQLAELFEEDEDAGSRPKKRGGRAA 1872
            PIE F+R TGAA+RA++ + ELT NF+P  Q + G +V LP+P+RDLP +EV+ +RGEADA++LR R H+  LHA + PQ  AA  +F+AVEQAR E++GARRMAG + NL+AALEE+ R RG+AR   R++VP+AEA+ +L RE +TG   PPS + +VDLWRP+ ++ +   + +L     DQ A+   +R+L+  L    M+D++   E ++++   +                XXXXXXXXXXXXXX               G++  G  DE    PG+P R P +  ++   EAYK F+ EFDE+V+A ELCDPDEL+RLRQ LDQQL HLQ VI+RLANR+QR+L+AKQ R+WEF+LEEG+LDT+RLSRVVT+PGH LS+K+E  T+FRDTVVTLL+DNSGSMRGRPI+VAAMSADILARTLERCGVKVE+LGFTTR WKGGQ+RE+W++AGKP  PGRLNDLRHI+YKSAD PWRR RKNLGLMLREG+LKENIDGEAL+WAH+RL+ RPEQRRILM++SDGAPVDDSTLSVN GNYLERHLR VI +IETRSPVEL+AIGIGHDVTRYY+RAVTIVDAEQLGGT+M++LAELF+ED    +  ++RG RAA
Sbjct:    7 PIERFKRATGAAIRALAEQAELTANFAPSGQGLVGKEVRLPMPARDLPADEVAQVRGEADAVALRLRFHNEKLHASQRPQNQAAREIFDAVEQARCESLGARRMAGCSLNLDAALEERYRARGYARAQNRDEVPMAEALRLLAREAMTGHAAPPSGQRIVDLWRPHFDAEVLKDIHALDAMAGDQKAYGRTVRRLLQHLDIEAMADQEPMDEDESEEGGDEAQQEPSQMRGEGGEQDXXXXXXXXXXXXXXLGEAEGDDDEAAEADGEMMAGMADE---QPGRPGRRPNWDPSETIDEAYKPFTTEFDEIVEAAELCDPDELTRLRQMLDQQLAHLQGVIARLANRMQRKLLAKQQRAWEFNLEEGLLDTSRLSRVVTNPGHSLSFKVERQTDFRDTVVTLLIDNSGSMRGRPISVAAMSADILARTLERCGVKVEVLGFTTRMWKGGQARERWISAGKPQLPGRLNDLRHIIYKSADEPWRRGRKNLGLMLREGILKENIDGEALIWAHNRLIARPEQRRILMVISDGAPVDDSTLSVNPGNYLERHLREVIAYIETRSPVELVAIGIGHDVTRYYRRAVTIVDAEQLGGTMMEKLAELFDEDPGLATGGRRRGRRAA 622          
BLAST of mRNA_D-mesarthrocarpus_Contig10490.1.1 vs. uniprot
Match: UPI001423E0D3 (cobaltochelatase subunit CobT n=1 Tax=Pelagibius litoralis TaxID=374515 RepID=UPI001423E0D3)

HSP 1 Score: 704 bits (1816), Expect = 3.230e-247
Identity = 378/617 (61.26%), Postives = 460/617 (74.55%), Query Frame = 1
Query:   19 DGPIEAFRRVTGAAMRAMSREPELTVNFSPDSQHVQGNDVHLPLPSRDLPYEEVSVIRGEADAISLRRRHHDTTLHAEKAPQAVAASALFEAVEQARVEAIGARRMAGVAANLEAALEEKSRVRGFARVTEREQVPIAEAVGMLTREVLTGSPPPPSARHMVDLWRPYIESRIGHGLESLVDYIDDQAAFADLIRQLIS----DLGMSDEQMAAEPDAQDSQGDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDLQPGSGDEDPDSPGQPWRPPEFLHNQPETEAYKAFSVEFDEVVDAEELCDPDELSRLRQQLDQQLGHLQSVISRLANRLQRRLMAKQTRSWEFDLEEGMLDTARLSRVVTSPGHPLSYKMELDTNFRDTVVTLLLDNSGSMRGRPITVAAMSADILARTLERCGVKVEILGFTTRAWKGGQSREKWLTAGKPGNPGRLNDLRHIVYKSADAPWRRVRKNLGLMLREGLLKENIDGEALLWAHDRLLGRPEQRRILMIVSDGAPVDDSTLSVNAGNYLERHLRRVIDWIETRSPVELLAIGIGHDVTRYYKRAVTIVDAEQLGGTVMDQLAELFEEDEDAGSRPKKR 1857
            + P++ FRR T A +RA++   ++ VNF+P  Q + G +V + LP+R+LP E+ +++RGEADA +LR RHHD +LHA   P++  A  +F+AVEQAR EA+G RRMAGVA NL+AAL E+ R RG  R   RE  P+ EA+ +L RE +TG+PPPP+A+ +VDLWRP +   I H +  L +  +DQA FA+ +R +++    D+G+ DE    + D+       XXX                             XXX          ++  G G+EDP  PGQ   P  F  N  + EAY+AF+ EFDE V+AEELCDP+EL+RLRQ LDQQL HLQ VI+RLANRLQRRLMAKQTR+W+F+LEEG+LDTARL+RVV +P H LSYK E D +FRDTVV+LL+DNSGSMRGRPITVAAMSADILARTLERCGVKVEILGFTTR WKGGQSRE+W+ AGKP +PGRLNDLRHIVYKSADAPWRR RKNLGLMLREG+LKENIDGEALLWAH+RL+GRPEQRRILM++SDGAPVDDSTLSVN GNYLERHLR VI ++E RSPVELLAIGIGHDVTRYY+RAVTIVDAEQLGGTVM++LAELF+E+    S P  R
Sbjct:    5 ENPLDLFRRTTAATVRAIAERDDINVNFAPRGQGLVGKEVKVTLPARNLPQEDAALVRGEADAAALRLRHHDGSLHANSRPRSQEAREIFDAVEQARCEALGMRRMAGVAQNLDAALSEQYRNRGLNRAASREDAPLCEALRLLAREAITGTPPPPAAKALVDLWRPVLGPEIFHDIAELGNRAEDQAVFAEKVRDMLTHLDIDIGLEDE--LEQDDSXXXXXXXXXXQDNSGTQTDGEDTAESPTSLDGEDSDGDEXXXSDPQAAEADAEVMEGDGEEDPGRPGQ--LPELFGRNAQDQEAYRAFTQEFDETVEAEELCDPEELTRLRQLLDQQLAHLQGVIARLANRLQRRLMAKQTRAWDFNLEEGILDTARLTRVVVNPMHSLSYKQERDMDFRDTVVSLLIDNSGSMRGRPITVAAMSADILARTLERCGVKVEILGFTTRMWKGGQSRERWIGAGKPPSPGRLNDLRHIVYKSADAPWRRARKNLGLMLREGILKENIDGEALLWAHNRLIGRPEQRRILMVISDGAPVDDSTLSVNPGNYLERHLRDVITYVENRSPVELLAIGIGHDVTRYYRRAVTIVDAEQLGGTVMEKLAELFDEEGPGMSHPAPR 617          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10490.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E8XP49_9PROT5.850e-30273.51Cobaltochelatase subunit CobT n=1 Tax=Alphaproteob... [more]
A0A2E7I5X0_9PROT2.950e-29576.74Cobaltochelatase subunit CobT n=3 Tax=Alphaproteob... [more]
A0A848WC15_9PROT9.750e-28871.38Cobaltochelatase subunit CobT n=1 Tax=Alphaproteob... [more]
A0A2S6QKP0_9PROT2.570e-28371.20Aerobic cobaltochelatase subunit CobT n=1 Tax=Alph... [more]
A0A2E3XCV1_9PROT2.650e-27872.86Cobaltochelatase subunit CobT n=1 Tax=Rhodospirill... [more]
UPI001A96BB781.040e-25260.58cobaltochelatase subunit CobT n=1 Tax=Azospirillum... [more]
A0A3N1LK81_9PROT3.670e-25162.66Cobaltochelatase CobT subunit n=1 Tax=Stella humos... [more]
A0A839SZ87_9HYPH3.460e-25064.58Cobaltochelatase CobT n=1 Tax=Limibacillus halophi... [more]
A0A1Y6BX44_9HYPH4.710e-24961.71Cobaltochelatase CobT subunit n=1 Tax=Tistlia cons... [more]
UPI001423E0D33.230e-24761.26cobaltochelatase subunit CobT n=1 Tax=Pelagibius l... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10490contigD-mesarthrocarpus_Contig10490:1160..3034 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog414684.RC1_3074
Preferred namecobT
PFAMsCobT,CobT_C
Model size1875
Max annot lvl204441|Rhodospirillales
KEGG rclassRC02000
KEGG koko:K09883
KEGG ReactionR05227
KEGG Pathwayko00860,ko01100,map00860,map01100
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.12e-244
EggNOG OGsCOG4547@1|root,COG4547@2|Bacteria,1MX11@1224|Proteobacteria,2TS4N@28211|Alphaproteobacteria,2JQPT@204441|Rhodospirillales
EC6.6.1.2
DescriptionCOG4547 Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide 5, 6-dimethylbenzimidazole phosphoribosyltransferase)
Cds size1875
COG categoryH
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789185.8672714-CDS-D-mesarthrocarpus_Contig10490:1159..30341680789185.8672714-CDS-D-mesarthrocarpus_Contig10490:1159..3034Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10490 1160..3034 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10490.1.1prot_D-mesarthrocarpus_Contig10490.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10490 1160..3034 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10490.1.1

>prot_D-mesarthrocarpus_Contig10490.1.1 ID=prot_D-mesarthrocarpus_Contig10490.1.1|Name=mRNA_D-mesarthrocarpus_Contig10490.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=625bp
MASNSQDGPIEAFRRVTGAAMRAMSREPELTVNFSPDSQHVQGNDVHLPL
PSRDLPYEEVSVIRGEADAISLRRRHHDTTLHAEKAPQAVAASALFEAVE
QARVEAIGARRMAGVAANLEAALEEKSRVRGFARVTEREQVPIAEAVGML
TREVLTGSPPPPSARHMVDLWRPYIESRIGHGLESLVDYIDDQAAFADLI
RQLISDLGMSDEQMAAEPDAQDSQGDDPDSPDGDQDGDAGSEGEATAMEG
GDQQDAGEDGEEMEAPTEDGDGDLQPGSGDEDPDSPGQPWRPPEFLHNQP
ETEAYKAFSVEFDEVVDAEELCDPDELSRLRQQLDQQLGHLQSVISRLAN
RLQRRLMAKQTRSWEFDLEEGMLDTARLSRVVTSPGHPLSYKMELDTNFR
DTVVTLLLDNSGSMRGRPITVAAMSADILARTLERCGVKVEILGFTTRAW
KGGQSREKWLTAGKPGNPGRLNDLRHIVYKSADAPWRRVRKNLGLMLREG
LLKENIDGEALLWAHDRLLGRPEQRRILMIVSDGAPVDDSTLSVNAGNYL
ERHLRRVIDWIETRSPVELLAIGIGHDVTRYYKRAVTIVDAEQLGGTVMD
QLAELFEEDEDAGSRPKKRGGRAA*
back to top

mRNA from alignment at D-mesarthrocarpus_Contig10490:1160..3034-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10490.1.1 ID=mRNA_D-mesarthrocarpus_Contig10490.1.1|Name=mRNA_D-mesarthrocarpus_Contig10490.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1875bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10490:1160..3034- (Discosporangium mesarthrocarpum MT17_79)
ATGGCGTCGAATTCCCAGGACGGACCGATCGAGGCGTTCCGCCGCGTCAC AGGCGCGGCGATGCGCGCCATGTCGCGCGAACCGGAACTGACGGTCAACT TCTCGCCCGATTCGCAGCACGTGCAGGGCAACGATGTACACCTGCCGCTG CCAAGCCGCGACCTGCCCTATGAAGAGGTCAGTGTCATCCGCGGCGAGGC CGATGCGATCTCGTTGCGCCGGCGGCATCACGACACGACGCTGCACGCCG AAAAGGCGCCGCAGGCAGTGGCCGCCAGCGCCCTGTTCGAAGCCGTCGAA CAGGCGCGCGTCGAGGCGATCGGCGCGCGTCGCATGGCCGGCGTTGCCGC CAATCTGGAGGCGGCGCTCGAGGAAAAGTCGCGCGTGCGCGGCTTTGCCC GCGTCACCGAGCGCGAGCAGGTGCCGATTGCCGAAGCGGTCGGCATGCTG ACCCGCGAAGTGCTGACCGGCAGCCCGCCGCCACCTTCGGCGCGCCACAT GGTCGATCTGTGGCGGCCCTATATCGAATCGCGTATCGGCCACGGTCTTG AGAGCCTCGTTGACTATATCGACGACCAGGCCGCCTTCGCCGACCTGATC CGCCAGTTGATCAGCGATCTCGGCATGTCCGACGAGCAGATGGCGGCCGA GCCCGATGCGCAGGACAGCCAGGGCGACGACCCCGATTCGCCGGATGGCG ACCAGGACGGCGATGCCGGCTCCGAAGGCGAAGCCACGGCCATGGAAGGC GGCGACCAGCAGGACGCCGGCGAAGATGGCGAGGAGATGGAAGCGCCGAC CGAGGATGGCGACGGCGACCTCCAGCCCGGTTCCGGCGACGAGGACCCCG ACAGCCCGGGCCAGCCCTGGCGGCCGCCGGAATTCCTCCACAACCAGCCC GAAACCGAAGCCTACAAGGCATTCTCCGTCGAGTTCGACGAAGTCGTCGA TGCCGAGGAGCTGTGCGACCCGGACGAATTGTCGCGGCTGCGCCAGCAGC TCGACCAGCAGCTCGGCCATCTGCAGAGCGTCATCTCGCGCCTCGCCAAC CGGCTGCAGCGCCGCCTGATGGCCAAGCAGACGCGGTCCTGGGAGTTCGA CCTTGAGGAAGGCATGCTCGACACCGCGCGGCTGTCGCGCGTCGTCACCA GCCCGGGTCACCCGTTGAGCTACAAGATGGAGCTCGACACCAACTTCCGC GACACCGTCGTCACCCTGCTGCTCGACAATTCGGGCTCGATGCGCGGCCG GCCGATCACTGTCGCGGCGATGAGCGCCGACATCCTCGCCCGCACCCTCG AGCGCTGCGGCGTCAAGGTTGAGATCCTCGGCTTCACGACGCGCGCCTGG AAGGGCGGGCAGTCGCGCGAGAAATGGCTGACCGCCGGCAAGCCGGGCAA TCCGGGCCGCCTCAATGATCTGCGCCACATCGTCTACAAATCGGCCGACG CGCCGTGGCGGCGGGTGCGCAAGAATCTCGGCCTGATGCTGCGCGAGGGC CTGCTCAAGGAGAATATCGACGGCGAGGCCCTGTTGTGGGCGCATGACCG TCTGCTCGGCCGGCCCGAACAGCGCCGTATCCTGATGATCGTGTCCGATG GCGCCCCGGTCGACGATTCGACCCTGTCGGTCAACGCCGGCAACTATCTC GAACGCCATCTGCGCCGGGTGATCGACTGGATCGAGACCCGTTCGCCGGT CGAATTGCTGGCCATCGGCATCGGCCACGACGTGACGCGCTATTACAAGC GCGCCGTGACGATCGTCGATGCCGAGCAGCTTGGCGGCACGGTGATGGAC CAGCTCGCCGAACTGTTCGAGGAAGACGAGGATGCCGGCAGCCGGCCGAA AAAGCGCGGCGGCCGCGCGGCATAG
back to top

Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10490:1160..3034-

>mRNA_D-mesarthrocarpus_Contig10490.1.1 ID=mRNA_D-mesarthrocarpus_Contig10490.1.1|Name=mRNA_D-mesarthrocarpus_Contig10490.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1875bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10490:1160..3034- (Discosporangium mesarthrocarpum MT17_79)
ATGGCGTCGAATTCCCAGGACGGACCGATCGAGGCGTTCCGCCGCGTCAC
AGGCGCGGCGATGCGCGCCATGTCGCGCGAACCGGAACTGACGGTCAACT
TCTCGCCCGATTCGCAGCACGTGCAGGGCAACGATGTACACCTGCCGCTG
CCAAGCCGCGACCTGCCCTATGAAGAGGTCAGTGTCATCCGCGGCGAGGC
CGATGCGATCTCGTTGCGCCGGCGGCATCACGACACGACGCTGCACGCCG
AAAAGGCGCCGCAGGCAGTGGCCGCCAGCGCCCTGTTCGAAGCCGTCGAA
CAGGCGCGCGTCGAGGCGATCGGCGCGCGTCGCATGGCCGGCGTTGCCGC
CAATCTGGAGGCGGCGCTCGAGGAAAAGTCGCGCGTGCGCGGCTTTGCCC
GCGTCACCGAGCGCGAGCAGGTGCCGATTGCCGAAGCGGTCGGCATGCTG
ACCCGCGAAGTGCTGACCGGCAGCCCGCCGCCACCTTCGGCGCGCCACAT
GGTCGATCTGTGGCGGCCCTATATCGAATCGCGTATCGGCCACGGTCTTG
AGAGCCTCGTTGACTATATCGACGACCAGGCCGCCTTCGCCGACCTGATC
CGCCAGTTGATCAGCGATCTCGGCATGTCCGACGAGCAGATGGCGGCCGA
GCCCGATGCGCAGGACAGCCAGGGCGACGACCCCGATTCGCCGGATGGCG
ACCAGGACGGCGATGCCGGCTCCGAAGGCGAAGCCACGGCCATGGAAGGC
GGCGACCAGCAGGACGCCGGCGAAGATGGCGAGGAGATGGAAGCGCCGAC
CGAGGATGGCGACGGCGACCTCCAGCCCGGTTCCGGCGACGAGGACCCCG
ACAGCCCGGGCCAGCCCTGGCGGCCGCCGGAATTCCTCCACAACCAGCCC
GAAACCGAAGCCTACAAGGCATTCTCCGTCGAGTTCGACGAAGTCGTCGA
TGCCGAGGAGCTGTGCGACCCGGACGAATTGTCGCGGCTGCGCCAGCAGC
TCGACCAGCAGCTCGGCCATCTGCAGAGCGTCATCTCGCGCCTCGCCAAC
CGGCTGCAGCGCCGCCTGATGGCCAAGCAGACGCGGTCCTGGGAGTTCGA
CCTTGAGGAAGGCATGCTCGACACCGCGCGGCTGTCGCGCGTCGTCACCA
GCCCGGGTCACCCGTTGAGCTACAAGATGGAGCTCGACACCAACTTCCGC
GACACCGTCGTCACCCTGCTGCTCGACAATTCGGGCTCGATGCGCGGCCG
GCCGATCACTGTCGCGGCGATGAGCGCCGACATCCTCGCCCGCACCCTCG
AGCGCTGCGGCGTCAAGGTTGAGATCCTCGGCTTCACGACGCGCGCCTGG
AAGGGCGGGCAGTCGCGCGAGAAATGGCTGACCGCCGGCAAGCCGGGCAA
TCCGGGCCGCCTCAATGATCTGCGCCACATCGTCTACAAATCGGCCGACG
CGCCGTGGCGGCGGGTGCGCAAGAATCTCGGCCTGATGCTGCGCGAGGGC
CTGCTCAAGGAGAATATCGACGGCGAGGCCCTGTTGTGGGCGCATGACCG
TCTGCTCGGCCGGCCCGAACAGCGCCGTATCCTGATGATCGTGTCCGATG
GCGCCCCGGTCGACGATTCGACCCTGTCGGTCAACGCCGGCAACTATCTC
GAACGCCATCTGCGCCGGGTGATCGACTGGATCGAGACCCGTTCGCCGGT
CGAATTGCTGGCCATCGGCATCGGCCACGACGTGACGCGCTATTACAAGC
GCGCCGTGACGATCGTCGATGCCGAGCAGCTTGGCGGCACGGTGATGGAC
CAGCTCGCCGAACTGTTCGAGGAAGACGAGGATGCCGGCAGCCGGCCGAA
AAAGCGCGGCGGCCGCGCGGCATAG
back to top