mRNA_D-mesarthrocarpus_Contig1049.6.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
|
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1049.6.1 vs. uniprot
Match: UPI001D014FBD (uncharacterized mitochondrial protein AtMg00810-like n=3 Tax=Triticum aestivum TaxID=4565 RepID=UPI001D014FBD) HSP 1 Score: 113 bits (283), Expect = 2.080e-23 Identity = 66/203 (32.51%), Postives = 114/203 (56.16%), Query Frame = 1
Query: 205 LDFKQAFLNAPLEEDIWLELPDG--------RVVKANKAIYGLKQSALAWWEELKNTVLRERWTASDYDTCMYYR-TGEKLSILMAYVDDILLTGNNHDEITHIKRKLLRKYEGRDFGAPQRILGVNISIPEQDISLKQLYAESIVTEGMGSVQVRGASTPLEPGIDMTARRKDEETLDGNIYSYPTLVGKLIFLAGCQDQIS 786
LD K AFL+ L+E++++E+P G +V + K++YGLKQS AW++ + V + + D ++YR T +K++I+ YVDDI++TG++ +EI +K L +++E +D G + LG+ ++ E+ ISL Q + MG + R A TP+E +TA+ + N Y LVG+L++L + I+
Sbjct: 21 LDVKNAFLHGDLKEEVYMEIPPGFGTEQTTGKVCRLKKSLYGLKQSPRAWFDRFRRAVWNMGYGQCNGDHTVFYRHTNKKITIVAVYVDDIIITGDDEEEIKRVKGCLSKEFEVKDLGNLKYFLGIEVARTEKGISLCQRKYTLDLLSDMGMMGCRAAPTPIEQNHQVTAQSGELV----NKEDYQKLVGRLLYLCHTRPDIT 219
BLAST of mRNA_D-mesarthrocarpus_Contig1049.6.1 vs. uniprot
Match: A0A251TSG4_HELAN (Putative ribonuclease H-like domain, Reverse transcriptase, RNA-dependent DNA polymerase n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251TSG4_HELAN) HSP 1 Score: 115 bits (289), Expect = 2.250e-23 Identity = 72/203 (35.47%), Postives = 114/203 (56.16%), Query Frame = 1
Query: 205 LDFKQAFLNAPLEEDIWLELPDG-------RVVKANKAIYGLKQSALAWWEELKNTVLRERWTASDYDTCMYYRTGEKLSILM-AYVDDILLTGNNHDEITHIKRKLLRKYEGRDFGAPQRILGVNISIPEQDISLKQL-YAESIVTEGMGSVQVRGASTPLEPGIDMTARRKDEETLDGNIYSYPTLVGKLIFLAGCQDQIS 786
LD AFL L+E++++ +PDG +V K NK++YGLKQ+ W E+L N +L+ + S D ++ ++ + I+M YVDDI+LTGNN EI ++KR L +++ +D G + LG+ + ++ I L Q Y ++ E G + AS P+EP +T K EE N+ Y LVGKLI+L+ + I+
Sbjct: 416 LDVNNAFLYGNLKEEVYMTMPDGLNACHHNKVCKLNKSLYGLKQAPRMWNEKLVNVLLKIGFYQSKCDHSIFIKSDNNVFIVMLVYVDDIILTGNNKQEIDNVKRLLQSEFKIKDLGLLKFFLGIEVIKTKEGICLSQRKYCMDLLNE-FGMSGCKPASCPIEPNYVVTNLCKKEEANLVNVNEYQRLVGKLIYLSHTRPDIA 617
BLAST of mRNA_D-mesarthrocarpus_Contig1049.6.1 vs. uniprot
Match: A0A6A3CVK4_HIBSY (Uncharacterized protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3CVK4_HIBSY) HSP 1 Score: 115 bits (287), Expect = 5.300e-23 Identity = 75/227 (33.04%), Postives = 120/227 (52.86%), Query Frame = 1
Query: 208 DFKQAFLNAPLEEDIWLELP--------DGRVVKANKAIYGLKQSALAWWEELKNTVLRERWTASDYDTCMYYRTGE-KLSILMAYVDDILLTGNNHDEITHIKRKLLRKYEGRDFGAPQRILGVNISIPEQDISLKQLYAESIVTEGMGSVQVRGASTPLEPGIDMTARRKDEETLDGNIYSYPTLVGKLIFLAGCQDQISPTAFVSSGAGLSHHAFATGEFYDMY 861
D K AFLN LEE++++E+P DGRV K K+IYGLKQS AW+E + + +T + D M+Y+ K++IL+ YVDDI++TG+N E+ +K L ++E +D G + LG+ ++ + I + Q + + +G + + +TP++P + + E +D N Y LVGKLI+L + I AFV S H + F +Y
Sbjct: 678 DVKNAFLNGELEEEVFMEVPLGFDELKKDGRVCKLKKSIYGLKQSPRAWFERFTRAMKQHGYTQAQSDHIMFYKHNNGKIAILIVYVDDIVMTGDNTVELESLKNFLSNQFEVKDIGQLKYFLGMEVARSSKGIIISQRKYVIDILKEIGLLGCKPVATPIDPNQKLE-KEDGVEPVDKN--RYQKLVGKLIYLDHTRPDI---AFVVSLVSQFMHCPSERHFKAVY 898
BLAST of mRNA_D-mesarthrocarpus_Contig1049.6.1 vs. uniprot
Match: A0A151UBF2_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151UBF2_CAJCA) HSP 1 Score: 109 bits (272), Expect = 5.310e-23 Identity = 64/203 (31.53%), Postives = 110/203 (54.19%), Query Frame = 1
Query: 205 LDFKQAFLNAPLEEDIWLELPDG--------RVVKANKAIYGLKQSALAWWEELKNTVLRERWTASDYDTCMYYRTGE--KLSILMAYVDDILLTGNNHDEITHIKRKLLRKYEGRDFGAPQRILGVNISIPEQDISLKQLYAESIVTEGMGSVQVRGASTPLEPGIDMTARRKDEETLDGNIYSYPTLVGKLIFLAGCQDQI 783
LD K AF N LEE++++++P G V K K++Y LKQS AW++ L V + + D M+ + K+++ + YVDDI++TGN++D+I H+K L +++E +D G + LG+ I+ + I + Q + + + + A+TP+EP +R +EE+ + Y +LVGKLI+L + I
Sbjct: 1 LDIKNAFRNGELEEEVYMQIPPGLESSRTSSMVCKLRKSLYSLKQSPRAWFDRLTRVVKEDGFNQCQSDHTMFVKHSVEGKVALFIVYVDDIVITGNDYDQIKHLKGILAKEFEVKDLGQLKYFLGMEIARTKNGIYVSQRKYTLDLLQETSMLGCKAANTPIEP-----EKRSEEESPPTDKDRYQSLVGKLIYLTHTRPDI 198
BLAST of mRNA_D-mesarthrocarpus_Contig1049.6.1 vs. uniprot
Match: A0A446KBU5_TRITD (Uncharacterized protein n=1 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446KBU5_TRITD) HSP 1 Score: 115 bits (287), Expect = 6.370e-23 Identity = 66/210 (31.43%), Postives = 117/210 (55.71%), Query Frame = 1
Query: 205 LDFKQAFLNAPLEEDIWLELPDG--------RVVKANKAIYGLKQSALAWWEELKNTVLRERWTASDYDTCMYYR-TGEKLSILMAYVDDILLTGNNHDEITHIKRKLLRKYEGRDFGAPQRILGVNISIPEQDISLKQLYAESIVTEGMGSVQVRGASTPLEPGIDMTARRKDEETLDGNIYSYPTLVGKLIFLAGCQDQISPTAFVSS 807
LD K AFL+ L+E++++E+P G +V + K++YGLKQS AW++ + V + + D ++Y+ + ++++IL YVDDI++TG+N +EI +K+ L + +E +D G + LG+ ++ ++ I+L Q + MG + R A TP+E +TA+ ++ N Y LVGKL++L + I+ V S
Sbjct: 1084 LDVKNAFLHGDLQEEVYMEIPPGLSTPGTVGKVCRLRKSLYGLKQSPRAWFDRFRQAVCSMEYKQCNGDHTVFYKHSKQQITILAVYVDDIIITGDNEEEIGRLKKCLGKAFEVKDLGQLKYFLGIEVARSKRGIALSQRKYTLELLSDMGMLGCRAAPTPIEQNHKLTAQMGEQV----NKAKYQQLVGKLLYLCHTRPDITYAVSVVS 1289
BLAST of mRNA_D-mesarthrocarpus_Contig1049.6.1 vs. uniprot
Match: UPI001B3BA752 (uncharacterized protein LOC107885934 isoform X1 n=1 Tax=Gossypium hirsutum TaxID=3635 RepID=UPI001B3BA752) HSP 1 Score: 114 bits (286), Expect = 7.110e-23 Identity = 66/197 (33.50%), Postives = 115/197 (58.38%), Query Frame = 1
Query: 205 LDFKQAFLNAPLEEDIWLELPDG--------RVVKANKAIYGLKQSALAWWEELKNTVLRERWTASDYDTCMYYR--TGEKLSILMAYVDDILLTGNNHDEITHIKRKLLRKYEGRDFGAPQRILGVNISIPEQDISLKQLYAESIVTEGMGSVQVRGASTPLEPGIDMTARRKDEETLDGNIYSYPTLVGKLIFLA 765
LD K AFLN LEE+++++LP G +V K NK++YGLKQS AW+E +L+ + S D ++ + + K +IL+ YVDDI+LTG++ +EI+++K+ L R++E +D G + LG+ ++ ++ + + Q + + G + + A TP+E + ++DE +D + LVGKLI+L+
Sbjct: 648 LDVKNAFLNGKLEEEVYMQLPPGLKSIEGSNKVCKLNKSLYGLKQSPRAWFERFTKVILQNGYKQSLADHTLFIKVTSTNKKAILIVYVDDIILTGDDEEEISNLKKLLNREFETKDLGKLRYFLGMEVARSKEGLVINQRKYVLDLLKETGFLGCKPADTPMEANLRFN--KEDESLVDRE--KFQRLVGKLIYLS 840
BLAST of mRNA_D-mesarthrocarpus_Contig1049.6.1 vs. uniprot
Match: A0A2I0WVG5_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0WVG5_9ASPA) HSP 1 Score: 113 bits (283), Expect = 1.030e-22 Identity = 65/205 (31.71%), Postives = 119/205 (58.05%), Query Frame = 1
Query: 205 LDFKQAFLNAPLEEDIWLELPDG--------RVVKANKAIYGLKQSALAWWEELKNTVLRERWTASDYDTCMYYRTGEK--LSILMAYVDDILLTGNNHDEITHIKRKLLRKYEGRDFGAPQRILGVNISIPEQDISL-KQLYAESIVTEGMGSVQVRGASTPLEPGIDMTARRKDEETLDGNIYSYPTLVGKLIFLAGCQDQIS 786
LD K AFL+ LEE+I++E+P G +V K KA+YGLKQS AW+ + +L + S D ++++ + ++IL+ YVDDI+LTG+N +E +++ L ++++ ++ G + LG+ ++ + I + +Q Y + ++ E G + + A TP+EP + + ++D + G +Y LVGKLI+L+ + I+
Sbjct: 319 LDVKNAFLHGDLEEEIFMEIPPGFKGKSEGNKVCKLKKALYGLKQSPRAWFGKFSKFMLLNGYQQSQGDHTLFFKHSDSGGVTILLVYVDDIILTGSNEEEKASLRKNLAKEFDIKELGRLKYFLGIEVAHSSKGIFISQQKYIKDLLKE-TGKLACKPAPTPVEPNLKLGEAKEDPDVDKG---AYQRLVGKLIYLSHTRPDIA 519
BLAST of mRNA_D-mesarthrocarpus_Contig1049.6.1 vs. uniprot
Match: A0A3Q7X2L9_CICAR (uncharacterized protein LOC101490977 isoform X1 n=1 Tax=Cicer arietinum TaxID=3827 RepID=A0A3Q7X2L9_CICAR) HSP 1 Score: 114 bits (284), Expect = 1.260e-22 Identity = 73/210 (34.76%), Postives = 118/210 (56.19%), Query Frame = 1
Query: 205 LDFKQAFLNAPLEEDIWLELPDG-------RVVKANKAIYGLKQSALAWWEELKNTVLRERWTA--SDYDTCMYYRTGEKLSILMAYVDDILLTGNNHDEITHIKRKLLRKYEGRDFGAPQRILGVNISIPEQDISLKQLYAESIVTEGMGSVQVRGASTPLEPGIDMTARRKDEETLDGNIYSYPTLVGKLIFLAGCQDQISPTAFVSS 807
LD K AFLN LEE+++++ P G V K K++YGLKQS AW+E+ +V R+ + SD+ M + K+SIL+ YVDDI+LTG++ E+ +K+ L +++E +D GA + LG+ ++ ++ I + Q + E G R A TP+E + A+ ++ ++ I Y LVGKLI+LA + I+ + V S
Sbjct: 652 LDVKNAFLNGDLEEEVYMDSPPGFEDKFGSNVCKLQKSLYGLKQSPRAWFEKFTQSVKRQGYMQGQSDHTLFMKFSNVGKISILIVYVDDIILTGDDIVEMERLKKNLTKEFEIKDLGALKYFLGMEVARSKKGIVVSQRKYILDLLEETGMSGCRPADTPME----LNAKLWEKGSVPVEIGRYQRLVGKLIYLAHTRPDIAFSVSVVS 857
BLAST of mRNA_D-mesarthrocarpus_Contig1049.6.1 vs. uniprot
Match: UPI0019247DCC (LOW QUALITY PROTEIN: uncharacterized protein LOC120144958 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=UPI0019247DCC) HSP 1 Score: 114 bits (285), Expect = 1.350e-22 Identity = 71/204 (34.80%), Postives = 117/204 (57.35%), Query Frame = 1
Query: 205 LDFKQAFLNAPLEEDIWLELPDG--------RVVKANKAIYGLKQSALAWWEELKNTVLRERWTASDYDTCMYYRTGE--KLSILMAYVDDILLTGNNHDEITHIKRKLLRKYEGRDFGAPQRILGVNISIPEQDISLKQL-YAESIVTEGMGSVQVRGASTPLEPGIDMTARRKDEETLDGNIYSYPTLVGKLIFLAGCQDQI 783
LD K AFLN LEE++++ LP G +V + +K++YGLKQS AW++ TV+ S D ++Y+ + K++IL+ YVDDI+LTG+N +T +K++L ++++ +D GA + LG+ + ++ I + Q Y ++ E G + + TP+EP + + A K EE D Y LVGKLI+L+ + I
Sbjct: 736 LDVKNAFLNGDLEEEVYMSLPPGFEKKLGSNKVCRLHKSLYGLKQSPRAWFDRFGKTVISYGLLQSQADHTVFYKYSKDGKVAILIVYVDDIILTGDNETRLTIMKKRLAKEFQIKDLGALKYFLGMEFARSKESIFVNQRKYVLDLLGE-TGLLGCKMVETPVEPNLKLQAA-KVEEVKDRE--QYQRLVGKLIYLSHTRPDI 935
BLAST of mRNA_D-mesarthrocarpus_Contig1049.6.1 vs. uniprot
Match: A0A1S2XBU5_CICAR (uncharacterized protein LOC101513206 n=1 Tax=Cicer arietinum TaxID=3827 RepID=A0A1S2XBU5_CICAR) HSP 1 Score: 114 bits (284), Expect = 1.470e-22 Identity = 73/210 (34.76%), Postives = 118/210 (56.19%), Query Frame = 1
Query: 205 LDFKQAFLNAPLEEDIWLELPDG-------RVVKANKAIYGLKQSALAWWEELKNTVLRERWTA--SDYDTCMYYRTGEKLSILMAYVDDILLTGNNHDEITHIKRKLLRKYEGRDFGAPQRILGVNISIPEQDISLKQLYAESIVTEGMGSVQVRGASTPLEPGIDMTARRKDEETLDGNIYSYPTLVGKLIFLAGCQDQISPTAFVSS 807
LD K AFLN LEE+++++ P G V K K++YGLKQS AW+E+ +V R+ + SD+ M + K+SIL+ YVDDI+LTG++ E+ +K+ L +++E +D GA + LG+ ++ ++ I + Q + E G R A TP+E + A+ ++ ++ I Y LVGKLI+LA + I+ + V S
Sbjct: 1027 LDVKNAFLNGDLEEEVYMDSPPGFEDKFGSNVCKLQKSLYGLKQSPRAWFEKFTQSVKRQGYMQGQSDHTLFMKFSNVGKISILIVYVDDIILTGDDIVEMERLKKNLTKEFEIKDLGALKYFLGMEVARSKKGIVVSQRKYILDLLEETGMSGCRPADTPME----LNAKLWEKGSVPVEIGRYQRLVGKLIYLAHTRPDIAFSVSVVS 1232 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1049.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1049.6.1 >prot_D-mesarthrocarpus_Contig1049.6.1 ID=prot_D-mesarthrocarpus_Contig1049.6.1|Name=mRNA_D-mesarthrocarpus_Contig1049.6.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=168bp MYYRTGEKLSILMAYVDDILLTGNNHDEITHIKRKLLRKYEGRDFGAPQRback to top mRNA from alignment at D-mesarthrocarpus_Contig1049:22619..24360- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig1049.6.1 ID=mRNA_D-mesarthrocarpus_Contig1049.6.1|Name=mRNA_D-mesarthrocarpus_Contig1049.6.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1742bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1049:22619..24360- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1049:22619..24360- >mRNA_D-mesarthrocarpus_Contig1049.6.1 ID=mRNA_D-mesarthrocarpus_Contig1049.6.1|Name=mRNA_D-mesarthrocarpus_Contig1049.6.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=504bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1049:22619..24360- (Discosporangium mesarthrocarpum MT17_79)back to top |