mRNA_D-mesarthrocarpus_Contig1049.5.2 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig1049.5.2
Unique NamemRNA_D-mesarthrocarpus_Contig1049.5.2
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig1049.5.2 vs. uniprot
Match: D7FV81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV81_ECTSI)

HSP 1 Score: 239 bits (610), Expect = 1.200e-68
Identity = 131/235 (55.74%), Postives = 165/235 (70.21%), Query Frame = 2 
Query:  308 GSVSGVNGQAE--KEPASGD-QTP--ADFLGPLDRAGGCTLLVVNVTATSSVKCKLDLQNIVMRARNAEYNPRRFSACVIRL---TDPKATALVFSSGKMVVTGSKSESMARLACRKFNKIIEKLGN-----------DVQLSDFAIQNMVATTDVKFPLRLEGLVASSHSQFCSYEPELFPGLIYRLAQPKVCLLIFVSGKVVLTGGKSIANLREAFIEMYPVLCSFRKSSVLV 955
            GS SG  G A   K+ A  + QT   A  +GP +  G C L +VNVTAT+ +KC +DL+ +VMRARNAEYNP+RFSAC+IRL    +PKATALVF +GK+VVTGS+S +    AC+ F +I+ KL N           D++  D  +QNMVATTDV FP+RLEGLVAS+   FC+YEPELFPGLIYR+  PK+C LIFVSGKVVLTG KS   L + F +MYP LC F+K++VL+
Sbjct:   93 GSSSGSKGAAPLGKQDAFNEAQTAMRAQVIGPFENHGQCKLSMVNVTATADMKCTIDLKTVVMRARNAEYNPKRFSACIIRLINKNEPKATALVFKTGKVVVTGSRSNASVDYACKTFARILSKLDNGSGGPSHKINFDLE-RDRRVQNMVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKICFLIFVSGKVVLTGAKSAQQLEDGFKKMYPTLCQFKKATVLL 326
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BLAST of mRNA_D-mesarthrocarpus_Contig1049.5.2 vs. uniprot
Match: A0A1Y2CIK6_9FUNG (Putative TATA-binding protein 2 n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2CIK6_9FUNG)

HSP 1 Score: 224 bits (570), Expect = 5.600e-65
Identity = 114/193 (59.07%), Postives = 146/193 (75.65%), Query Frame = 2 
Query:  362 QTPADFLGPLDRAGGCTLLVVNVTATSSVKCKLDLQNIVMRARNAEYNPRRFSACVIRLTDPKATALVFSSGKMVVTGSKSESMARLACRKFNKIIEKLGNDVQLSDFAIQNMVATTDVKFPLRLEGLVASSHSQFCSYEPELFPGLIYRLAQPKVCLLIFVSGKVVLTGGKSIANLREAFIEMYPVLCSFRK 940
            QTP    G +    G T ++ NV AT ++  KLDL+ I +RARNAEYNP+RF+A ++R+ DPK TAL+FSSGKMV+TG+KSE ++RLA RK+ +II+KLG   + +DF IQN+V + DVKFP+RLEGL A SH  F SYEPELFPGLIYR+ +PK+ LL+FVSGK+VLTG K    + EAF  +YPVL SFRK
Sbjct:   12 QTPG---GTMQWTSGITPVLQNVVATVNLDVKLDLKTIALRARNAEYNPKRFAAVIMRIRDPKTTALIFSSGKMVITGAKSEDLSRLAARKYARIIQKLGFAAKFTDFKIQNIVGSCDVKFPIRLEGL-AYSHGDFSSYEPELFPGLIYRMEKPKIVLLVFVSGKIVLTGAKLRTEIYEAFERIYPVLQSFRK 200
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BLAST of mRNA_D-mesarthrocarpus_Contig1049.5.2 vs. uniprot
Match: A0A5B8MV01_9CHLO (TATA-box binding protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MV01_9CHLO)

HSP 1 Score: 223 bits (568), Expect = 4.100e-64
Identity = 109/205 (53.17%), Postives = 153/205 (74.63%), Query Frame = 2 
Query:  347 PASGDQTPADF---LGPLDRAGGCTLLVVNVTATSSVKCKLDLQNIVMRARNAEYNPRRFSACVIRLTDPKATALVFSSGKMVVTGSKSESMARLACRKFNKIIEKLGNDVQLSDFAIQNMVATTDVKFPLRLEGLVASSHSQFCSYEPELFPGLIYRLAQPKVCLLIFVSGKVVLTGGKSIANLREAFIEMYPVLCSFRKSSVL 952
            P+ G +  +D    + P  R  G    + NV AT  + CKLDL++IV +ARNAEYNPRRF+A ++R+ +PK TAL+F+SGKMV TG+KSE+M++LA +K+ ++++K G   +  +F +QNMV + DV+FP+RLE ++A SHS FCSYEPE+FPGLIY++ QPKV LL+FVSGK+VLTG KS  ++ +AF  +YPVL  FRKS +L
Sbjct:   15 PSEGGEPGSDLQVVVAPGQRTNGIVPTIQNVVATVQMGCKLDLRSIVRQARNAEYNPRRFAAVIMRIREPKTTALMFASGKMVCTGAKSEAMSQLAAKKYVRVVQKCGMPAEFKEFKVQNMVGSCDVQFPIRLE-VLAHSHSVFCSYEPEIFPGLIYKMKQPKVVLLVFVSGKIVLTGAKSRQDIYQAFENIYPVLQEFRKSEIL 218
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BLAST of mRNA_D-mesarthrocarpus_Contig1049.5.2 vs. uniprot
Match: A0A0D2ANY5_9PEZI (TATA-box-binding protein n=1 Tax=Verruconis gallopava TaxID=253628 RepID=A0A0D2ANY5_9PEZI)

HSP 1 Score: 223 bits (568), Expect = 5.460e-64
Identity = 117/213 (54.93%), Postives = 155/213 (72.77%), Query Frame = 2 
Query:  308 GSVSGVNGQAE-KEPASGDQTPADFLGPLDRAGGCTLLVVNVTATSSVKCKLDLQNIVMRARNAEYNPRRFSACVIRLTDPKATALVFSSGKMVVTGSKSESMARLACRKFNKIIEKLGNDVQLSDFAIQNMVATTDVKFPLRLEGLVASSHSQFCSYEPELFPGLIYRLAQPKVCLLIFVSGKVVLTGGKSIANLREAFIEMYPVLCSFRKS 943
            G+V+G +GQ     PA+   TP     P     G    + N+ AT ++ C+LDL+ I + ARNAEYNP+RF+A ++R+ DPK TAL+F+SGKMVVTG+KSES ++LA RK+ +II+KLG D + +DF IQN+V + DV+FP+RLEGL AS+H  F SYEPELFPGLIYR+ +PK+ LLIFVSGK+VLTG K    + +AF  +YPVL  FRKS
Sbjct:   44 GTVNGASGQQNGPAPATPAATPGQ---PGSTTSGVVPKLQNLVATVNLSCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMVVTGAKSESDSKLASRKYARIIQKLGFDAKFTDFKIQNIVGSCDVQFPIRLEGL-ASTHHNFSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDFRKS 252
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BLAST of mRNA_D-mesarthrocarpus_Contig1049.5.2 vs. uniprot
Match: A0A2P6VMN0_9CHLO (TATA-box-binding 2 n=2 Tax=Chlorella clade TaxID=2511126 RepID=A0A2P6VMN0_9CHLO)

HSP 1 Score: 222 bits (566), Expect = 6.170e-64
Identity = 109/176 (61.93%), Postives = 140/176 (79.55%), Query Frame = 2 
Query:  425 NVTATSSVKCKLDLQNIVMRARNAEYNPRRFSACVIRLTDPKATALVFSSGKMVVTGSKSESMARLACRKFNKIIEKLGNDVQLSDFAIQNMVATTDVKFPLRLEGLVASSHSQFCSYEPELFPGLIYRLAQPKVCLLIFVSGKVVLTGGKSIANLREAFIEMYPVLCSFRKSSVL 952
            NV AT +++CKLDL+NI + ARNAEYNP+RF+A ++R+ +PK+TAL+F SGKMV TG+KSE+ AR A RK+ KI++KL   V   +F IQNMV + DVKFP+RLEGL AS+H+ FCSYEPELFPGLIYR+A PK+ LLIFVSGKVVLTG K   ++  AF  +YPVL +FRK  ++
Sbjct:   32 NVVATVNLECKLDLKNIALHARNAEYNPKRFAAVIMRIREPKSTALIFHSGKMVCTGTKSEAEARTASRKYAKILQKLSYSVSFKEFKIQNMVGSCDVKFPIRLEGL-ASTHAMFCSYEPELFPGLIYRMADPKIVLLIFVSGKVVLTGAKKREDIYRAFESIYPVLQTFRKGGMI 206
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BLAST of mRNA_D-mesarthrocarpus_Contig1049.5.2 vs. uniprot
Match: A0A507E7H3_9FUNG (Uncharacterized protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E7H3_9FUNG)

HSP 1 Score: 221 bits (564), Expect = 6.500e-64
Identity = 106/179 (59.22%), Postives = 140/179 (78.21%), Query Frame = 2 
Query:  404 GCTLLVVNVTATSSVKCKLDLQNIVMRARNAEYNPRRFSACVIRLTDPKATALVFSSGKMVVTGSKSESMARLACRKFNKIIEKLGNDVQLSDFAIQNMVATTDVKFPLRLEGLVASSHSQFCSYEPELFPGLIYRLAQPKVCLLIFVSGKVVLTGGKSIANLREAFIEMYPVLCSFRK 940
            G T ++ N+ AT ++ C+LDL+ I + ARNAEYNP+RF+A ++R+ +PK TAL+F+SGKMVVTG+KSE  ++LA RK+ +I++KLG   + SDF IQN+V + DVKFP+RLEGL A SH  FCSYEPELFPGLIYR+ +PK+ LLIFVSGK+VLTG K    + +AF  +YPVL  FRK
Sbjct:   38 GITPMLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTGAKSEEQSKLAARKYARIVQKLGFQAKFSDFKIQNIVGSCDVKFPIRLEGL-ALSHGNFCSYEPELFPGLIYRMTKPKIVLLIFVSGKIVLTGAKVRNEIYQAFENIYPVLAEFRK 215
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BLAST of mRNA_D-mesarthrocarpus_Contig1049.5.2 vs. uniprot
Match: A0A8E2F824_9PEZI (TBP-domain-containing protein n=2 Tax=leotiomyceta TaxID=716546 RepID=A0A8E2F824_9PEZI)

HSP 1 Score: 222 bits (566), Expect = 8.220e-64
Identity = 112/204 (54.90%), Postives = 149/204 (73.04%), Query Frame = 2 
Query:  332 QAEKEPASGDQTPADFLGPLDRAGGCTLLVVNVTATSSVKCKLDLQNIVMRARNAEYNPRRFSACVIRLTDPKATALVFSSGKMVVTGSKSESMARLACRKFNKIIEKLGNDVQLSDFAIQNMVATTDVKFPLRLEGLVASSHSQFCSYEPELFPGLIYRLAQPKVCLLIFVSGKVVLTGGKSIANLREAFIEMYPVLCSFRKS 943
            Q +    +G  TPA   G  + A G    + N+ AT ++ C+LDL+ I + ARNAEYNP+RF+A ++R+ +PK TAL+F+SGKMVVTG+KSE  +RLA RK+ +II+KLG + + +DF IQN+V + D+KFP+RLEGL AS H  F SYEPELFPGLIYR+ +PK+ LLIFVSGK+VLTG K    + +AF  +YPVL  FRKS
Sbjct:   42 QQQNNSVNGVATPAATPGTQNSASGIIPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTGAKSEDDSRLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGL-ASRHHNFSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDFRKS 244
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BLAST of mRNA_D-mesarthrocarpus_Contig1049.5.2 vs. uniprot
Match: A0A1D2AC59_AUXPR (Uncharacterized protein n=3 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2AC59_AUXPR)

HSP 1 Score: 221 bits (564), Expect = 1.050e-63
Identity = 109/176 (61.93%), Postives = 141/176 (80.11%), Query Frame = 2 
Query:  425 NVTATSSVKCKLDLQNIVMRARNAEYNPRRFSACVIRLTDPKATALVFSSGKMVVTGSKSESMARLACRKFNKIIEKLGNDVQLSDFAIQNMVATTDVKFPLRLEGLVASSHSQFCSYEPELFPGLIYRLAQPKVCLLIFVSGKVVLTGGKSIANLREAFIEMYPVLCSFRKSSVL 952
            NV AT +++CKLDL++I +RARNAEYNP+RF+A ++R+ +PK+TAL+F+SGKMV TG+KSE  +RLA RK+ +I++KL N V   +F IQNMV + DV+FP+RLEGL ASSHS FCSYEPELFPGLIYR+  PK+ LLIFVSGKVVLTG K    + +AF  +YPVL  F+K  +L
Sbjct:   28 NVVATVNLECKLDLKDIALRARNAEYNPKRFAAVIMRIREPKSTALIFASGKMVCTGAKSEQESRLAARKYARILQKLENPVIFKEFKIQNMVGSCDVRFPIRLEGL-ASSHSVFCSYEPELFPGLIYRMVDPKIVLLIFVSGKVVLTGAKRREEIYQAFENIYPVLKEFKKGGLL 202
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BLAST of mRNA_D-mesarthrocarpus_Contig1049.5.2 vs. uniprot
Match: A0A0B6YAJ1_9EUPU (Uncharacterized protein (Fragment) n=2 Tax=Euthyneura TaxID=216307 RepID=A0A0B6YAJ1_9EUPU)

HSP 1 Score: 222 bits (565), Expect = 1.080e-63
Identity = 109/195 (55.90%), Postives = 142/195 (72.82%), Query Frame = 2 
Query:  356 GDQTPADFLGPLDRAGGCTLLVVNVTATSSVKCKLDLQNIVMRARNAEYNPRRFSACVIRLTDPKATALVFSSGKMVVTGSKSESMARLACRKFNKIIEKLGNDVQLSDFAIQNMVATTDVKFPLRLEGLVASSHSQFCSYEPELFPGLIYRLAQPKVCLLIFVSGKVVLTGGKSIANLREAFIEMYPVLCSFRK 940
            G  TP     P     G    + N+  T ++ CKLDL+ I +RARNAEYNP+RF+A ++R+ DP+ TAL+FSSGKMV TG+KSE +A+LA RK+ +I++KLG   +  DF IQNMV + DV+FP+RLEGLV + H QF SYEPELFPGLIYR+ +P++ LLIFVSGKVVLTG K  + + EAF  +YP+L  FRK
Sbjct:   48 GPMTPFSPATPASEGSGIRPQLQNIVCTVNLNCKLDLKTIALRARNAEYNPKRFAAVIMRIRDPRTTALIFSSGKMVCTGAKSEELAKLAARKYARIVQKLGFPAKFLDFKIQNMVGSCDVRFPIRLEGLVLT-HGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRSEIYEAFENIYPILKGFRK 241
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BLAST of mRNA_D-mesarthrocarpus_Contig1049.5.2 vs. uniprot
Match: A0A670XZI9_PSETE (TATA-box binding protein like 2 n=2 Tax=Acanthophiinae TaxID=42167 RepID=A0A670XZI9_PSETE)

HSP 1 Score: 224 bits (572), Expect = 1.170e-63
Identity = 108/198 (54.55%), Postives = 144/198 (72.73%), Query Frame = 2 
Query:  347 PASGDQTPADFLGPLDRAGGCTLLVVNVTATSSVKCKLDLQNIVMRARNAEYNPRRFSACVIRLTDPKATALVFSSGKMVVTGSKSESMARLACRKFNKIIEKLGNDVQLSDFAIQNMVATTDVKFPLRLEGLVASSHSQFCSYEPELFPGLIYRLAQPKVCLLIFVSGKVVLTGGKSIANLREAFIEMYPVLCSFRK 940
            P+    TP   + P     G    + N+ AT ++ CKLDL+NI + ARNAEYNP+RF+A ++R+ +P+ TAL+FSSGKMV TG+KSE  +RLA RK+ ++++KLG   +  DF IQNMV + DVKFP+RLEGLV + H QF SYEPELFPGLIYR+ +P++ LLIFVSGKVVLTG K  + + EAF  +YP+L  F+K
Sbjct:  122 PSMAQITPITLVSPASEGSGIVPQLQNIVATVNLACKLDLKNIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLT-HQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKDRSEIYEAFENIYPILKGFKK 318
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1049.5.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV81_ECTSI1.200e-6855.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1Y2CIK6_9FUNG5.600e-6559.07Putative TATA-binding protein 2 n=1 Tax=Rhizoclosm... [more]
A0A5B8MV01_9CHLO4.100e-6453.17TATA-box binding protein n=1 Tax=Chloropicon primu... [more]
A0A0D2ANY5_9PEZI5.460e-6454.93TATA-box-binding protein n=1 Tax=Verruconis gallop... [more]
A0A2P6VMN0_9CHLO6.170e-6461.93TATA-box-binding 2 n=2 Tax=Chlorella clade TaxID=2... [more]
A0A507E7H3_9FUNG6.500e-6459.22Uncharacterized protein n=1 Tax=Powellomyces hirtu... [more]
A0A8E2F824_9PEZI8.220e-6454.90TBP-domain-containing protein n=2 Tax=leotiomyceta... [more]
A0A1D2AC59_AUXPR1.050e-6361.93Uncharacterized protein n=3 Tax=Auxenochlorella pr... [more]
A0A0B6YAJ1_9EUPU1.080e-6355.90Uncharacterized protein (Fragment) n=2 Tax=Euthyne... [more]
A0A670XZI9_PSETE1.170e-6354.55TATA-box binding protein like 2 n=2 Tax=Acanthophi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1049contigD-mesarthrocarpus_Contig1049:18418..22550 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FV81
PFAMsTBP
Model size2254
Max annot lvl2759|Eukaryota
KEGG koko:K03120
KEGG Pathwayko03022,ko05016,ko05165,ko05166,ko05168,ko05169,ko05203,map03022,map05016,map05165,map05166,map05168,map05169,map05203
Hectar predicted targeting categoryother localisation
GOsGO:0000126,GO:0000428,GO:0000976,GO:0000977,GO:0000979,GO:0000981,GO:0000983,GO:0000988,GO:0000989,GO:0000995,GO:0001012,GO:0001016,GO:0001046,GO:0001047,GO:0001067,GO:0001075,GO:0001085,GO:0001091,GO:0001092,GO:0001098,GO:0001099,GO:0001102,GO:0001134,GO:0001179,GO:0001186,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005669,GO:0005672,GO:0006139,GO:0006259,GO:0006351,GO:0006352,GO:0006355,GO:0006357,GO:0006359,GO:0006360,GO:0006366,GO:0006367,GO:0006383,GO:0006384,GO:0006725,GO:0006807,GO:0008134,GO:0008150,GO:0008152,GO:0008301,GO:0009058,GO:0009059,GO:0009303,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0015074,GO:0016043,GO:0016070,GO:0016072,GO:0016591,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019904,GO:0022607,GO:0030880,GO:0031323,GO:0031326,GO:0031974,GO:0031981,GO:0032196,GO:0032774,GO:0032991,GO:0033613,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0042790,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043565,GO:0043933,GO:0044085,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044798,GO:0046483,GO:0050789,GO:0050794,GO:0051123,GO:0051171,GO:0051252,GO:0055029,GO:0060255,GO:0061695,GO:0065003,GO:0065004,GO:0065007,GO:0070013,GO:0070893,GO:0070897,GO:0070898,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:0090575,GO:0090576,GO:0097159,GO:0097659,GO:0097718,GO:0098781,GO:0140110,GO:0140223,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1903506,GO:1990234,GO:1990837,GO:2000112,GO:2001141
Exons5
Evalue2.74e-74
EggNOG OGsCOG2101@1|root,KOG3302@2759|Eukaryota
Ec32 ortholog descriptionBeta2-adaptin/TBP, C-terminal domain
Ec32 orthologEc-14_000120.1
DescriptionDNA-templated transcription, initiation
Cds size939
COG categoryK
BRITEko00000,ko00001,ko03000,ko03021
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1049.5.2prot_D-mesarthrocarpus_Contig1049.5.2Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig1049 18638..21455 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789185.7170055-UTR-D-mesarthrocarpus_Contig1049:18417..186371680789185.7170055-UTR-D-mesarthrocarpus_Contig1049:18417..18637Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig1049 18418..18637 +
1680789185.787865-UTR-D-mesarthrocarpus_Contig1049:21455..225501680789185.787865-UTR-D-mesarthrocarpus_Contig1049:21455..22550Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig1049 21456..22550 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789185.7320373-CDS-D-mesarthrocarpus_Contig1049:18637..189431680789185.7320373-CDS-D-mesarthrocarpus_Contig1049:18637..18943Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1049 18638..18943 +
1680789185.747237-CDS-D-mesarthrocarpus_Contig1049:19484..196361680789185.747237-CDS-D-mesarthrocarpus_Contig1049:19484..19636Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1049 19485..19636 +
1680789185.7558782-CDS-D-mesarthrocarpus_Contig1049:20032..202101680789185.7558782-CDS-D-mesarthrocarpus_Contig1049:20032..20210Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1049 20033..20210 +
1680789185.7669547-CDS-D-mesarthrocarpus_Contig1049:20882..211531680789185.7669547-CDS-D-mesarthrocarpus_Contig1049:20882..21153Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1049 20883..21153 +
1680789185.776711-CDS-D-mesarthrocarpus_Contig1049:21423..214551680789185.776711-CDS-D-mesarthrocarpus_Contig1049:21423..21455Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1049 21424..21455 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig1049.5.2

>prot_D-mesarthrocarpus_Contig1049.5.2 ID=prot_D-mesarthrocarpus_Contig1049.5.2|Name=mRNA_D-mesarthrocarpus_Contig1049.5.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=313bp
MSRTGRGAGSGAGVGSTSISFSDTVQCSDGSVSGVNGQAEKEPASGDQTP
ADFLGPLDRAGGCTLLVVNVTATSSVKCKLDLQNIVMRARNAEYNPRRFS
ACVIRLTDPKATALVFSSGKMVVTGSKSESMARLACRKFNKIIEKLGNDV
QLSDFAIQNMVATTDVKFPLRLEGLVASSHSQFCSYEPELFPGLIYRLAQ
PKVCLLIFVSGKVVLTGGKSIANLREAFIEMYPVLCSFRKSSVLVNHISS
SSTSTPSKSSSGPEGSGNDSGSGSGRGGGEGGGSRTGKRPPQGAVTGEMA
GTGGARKAAKIT*
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mRNA from alignment at D-mesarthrocarpus_Contig1049:18418..22550+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig1049.5.2 ID=mRNA_D-mesarthrocarpus_Contig1049.5.2|Name=mRNA_D-mesarthrocarpus_Contig1049.5.2|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=4133bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1049:18418..22550+ (Discosporangium mesarthrocarpum MT17_79)
CAATTTTCCATCACAGTGATTGACTGGAGGTTGACGTGCGGTCGGGGTTG
TAGATTTCGAGCATAGCTGTAGCGCTAAGTGCTTGAACCCGTCTCGCGAG
TAATACTCCACGCTTCTCAGTGACTGTGCGTCAAAATTTTGCTTTCGTTC
CTCACGAATTGCTGTATACCTTCATCAAGGCGAAAAAAGCAAGAAATAAA
CAGTAAAACACGACTCCGCAATGTCCAGGACGGGGAGGGGAGCAGGGTCA
GGTGCAGGAGTAGGTTCAACATCAATTTCATTTTCGGATACGGTTCAATG
CTCCGATGGCTCCGTGTCCGGAGTTAACGGCCAGGCTGAGAAGGAGCCCG
CGTCTGGAGACCAGACCCCAGCCGACTTTCTTGGGCCTCTCGATCGGGCA
GGTGGCTGCACACTGTTGGTCGTCAACGTGACCGCCACCTCCAGCGTGAA
GTGCAAGCTGGACCTCCAGAACATCGTGATGAGGGCGCGTAATGCCGAGT
ACAACCCGAGGCGCTTCTCGGCATGCGTGAGTTTCTTTGGGAAAGTGTAG
TCTCCTGCCCTGCAATTCCTCTTTGAATTGCAGGGCTGAAGCTTGTATTT
TTCGCCACGAATCGCGTGGCTGGTTTCGTTGGAAAGTCCGGTAGGATAAA
ATACGAAAAACGGGAACTTTGCGAATATTTCACCTCATTATTTCCGTCAA
GACATGGCCGTAACAGGAACCTCAAACGGCGTTGTACTATTAGCAACACA
ACGAACACGCATGGCCTAGAGTTAGAGTTTGTGCGAGGACAGAGGTCAAG
GATAGATTTCTGCACTAGCACGCTTGCTCGCACATCGGTTGCTTGCCCGA
TCCTCTGTGGTAGGCCGGTCGCCGGGCATGTGCCGCGATGCTATTTTCGG
TAAATGCCATGAAGCTCAACAAGCGCGTGATAACACCCCCCCTAGCTAAA
ATATTCAAGATAACGTGTAAATGATGGTACGTCCGTCCGCAGGGGCGTGG
GGCAGTGCACCAGCTTTTGCAGGGATATTGTTTGATTGTCGTGCCGTTTT
CTTTTCCCTCGCACCAGGTGATCCGTCTGACCGACCCTAAGGCAACCGCT
CTTGTCTTCAGTTCGGGGAAAATGGTAGTAACAGGGTCGAAGTCGGAGTC
AATGGCGCGCTTGGCCTGCCGAAAGTTCAACAAGATCATTGAAAAGCTTG
GCAATGACGTCCAATTGAGGTAAGAATGTGTGGGGAGTGTGATGAACGGT
ACTGGTACATTTTGGCGCATCGTGTCGTGTCGCAGGGCAACGAAGAATGA
GGGTGAAGAGTGCGGTCGGTAAACGAATGAACTTCAACCTCTTGCCCACA
GATGCCCAACCCCTACCCAAAACCCAAACCGTAAGCTGGGATATGGCTTT
GCGGTGCCACGTCTGTTTGGTGCCCAGTAGCTGAGAAGCACGAGAGCCCA
GTTGCCACACAAAAAAGAGGATGGATTGACGTGCGGATCCTTCTCCAACA
CTTGCATGGTCCACTGAGGCGTGCTATTTGTGGGTGATGGCCAAAAATCA
CAGCCCCCAACTCTGAGAAGTGTCTGAACCCCGCCCCCCCAACTCCTGGT
CCGCGATTGTTTCAGCGACTTTGCCATTCAGAACATGGTGGCAACGACAG
ACGTGAAGTTCCCCCTTCGCCTTGAGGGCCTGGTTGCATCCAGCCACAGC
CAGTTCTGCTCCTACGAGCCAGAGCTCTTCCCTGGGCTGATTTACAGGCT
TGCTCAACCCAAGGTCTGCCTGCTCATCTTTGTCTCGGGCAAGGTGAACC
CTAACCCTTGAGCCAGGCACGGTTGCCATGCAGTCAGAGATGCTTGAGAG
CGTGATACCAGTGCGTTGGCTTAAGTAGCCCGGATAACTGGATGGCCACG
CTAGTGTAGTGGTGGGGCTTGTTGATATTGATGAGACAGCGTCATGGGGC
AGGCTGTCAGTCCCTTGAAGCCAAAGAAAAATGAACCTCCGATGTGCAAT
TTTATTCCAAGCTGGTGTAGAGGATGTTTGTTGGAGTTGAGAAGGAAGGG
GGTGAGTAATGAAGACAAGAAAACACTTCAGTAACAGCAAACAAAAGACC
TTATGTTGTACGTTAAAGTTGTGTTATTCTGAAGCCAAATACACCTCATA
TTTTACTCCAAATAATGCATTAGGGTGTGTCCAGTGGCCATCTGTAGTGT
GTAGAGCCTCATGCACTTTCATAATTGTTCTCAGATTGTTCTGGTTGTTC
CTTGTTAACTTTCTCAATGGATTTTTGCTGGAGACAGTCAAGAGAGAAGG
TTTTTGGCATCCCTAGCTGTCCCTCAAGATTTGGCAGTTGGTTTGTATGG
TGAAGGTGTCAAAATCTTAGCGACAGAGACAGCTGCCAAGCCACCACGGA
ATGGAGCAACCCTACAGCTCTCATCCTGCACTTCCCCCCCTTCCTCTTGG
GTGATTTGATGCCAGGTGGTGCTGACTGGAGGGAAATCTATTGCAAACCT
GAGGGAGGCATTCATAGAGATGTACCCTGTCCTCTGCAGCTTTAGAAAGA
GTTCTGTTCTAGTGAACCACATCTCTTCCTCCTCTACTTCTACTCCCTCC
AAGTCCTCAAGCGGACCTGAGGGCTCTGGGAACGACAGTGGGAGTGGGAG
TGGTCGGGGTGGTGGAGAAGGTGGAGGGAGCAGGACTGGAAAACGCCCAC
CTCAGGGGGCTGTCACTGGAGAGATGGCAGGAACAGGTGAGGTCCGGGAG
GACCAAAGGAACTGGAAGTGTCGTGTAATGGTTCAGGATAAGTGAGGGCA
ACGTAGTGTATGGGATGGGGGCTTCTTCACTTTTCTTACCCCGAGAGTAT
ACCTAAGTGGAAGGAAGACACTTGGAACCGGGGGCAACCTAGTCTATCCT
GCCTTGCTCATCTGTTACCACGCCATTCCACCTTACCACACCTGCCACCT
TCCCTCCTCTCCTTGTTGCCCTTATCATTTGAAACGTGAACACACATATG
ATTCAGGTGGAGCTCGCAAGGCTGCAAAAATCACATGATGATCCCTTCTC
GCACACCCCTGTTGGGACCTGAACTTCAACCATGCAAGCCAAGCCCCTTC
TGGGTACTTCAATGTGCTTCAGTGCTTCTGTGTACTCCAGATCGCAGTGC
CTTTTTGGCTGCAGTCACACTCCAGGAGGCAGTATGAGCAGTGCTTGTGT
TGCTAACATGGGGTGCGCTTGTCCATCCCGGGCTGAGGTATTGTATTGTA
GGTCCCTCTAGCTCCGGATGTCCAGTAGTAACCAGAGGGCAGCTGATTGG
GCACTACTGCAATCTTTGGATTGCAATCTCTGAGCACTGTCTGTCCAAAG
GCTATCAAGTCTGGGGACCCAGGTGCATGTCCTTTGAAATATGCTGCCCA
ACGGAAATTCCATGGTCAGGGGTGTGTGCTGGTACCTGGGGGTCTGTAAT
GGCAAGAGATGTGCATGTCTTGCCATACAAACTTTGTTTATTTGCTCAGT
GGTTTATTATTGCTGCTGCTGCCTAGATTAGGTAGACAGGTTGGCCTCTC
CAACCTCGGCATGGAGGTCTTGTTACATGTTATTTCCAGAATGGCCCAAA
GTTTTTGCTAGTTGCAATGGAGATGTTGCTACGTGCCTCGTGTGTGTTAG
TGCTGGTTGTTTTTTTGTGCCGTCCTTTGTGATGTTATTTATGGTTCTTT
TTGCTTCCCCATGTGCGCTTGTGGTTACCTTTGTTCCACCTGGTTGTGTG
CACTGTGAAACCCAAGAGCAGTTCCAGCATTCCAGCTTTGGTCCATCCAG
GGTCCCCCATCACACATCTTATGTAAATAGAGTGCAGCAAGTGGTGTAAT
TGTTTGGAAGTGATGTCATTGTGTGTTCTGAGAGCCCGAGAGTTACCCAA
CATAGAACATTTATGCTCATGTGTACCGCTAATGGTTTGAATCCACAGTA
GATTTTTTGATGAGTTTGTTTGGTTTTGCTTGTGTGCTTTTTGTGCTCAA
GACTTAGGGATTGTCTGTGCTGCACACTGAGAGAACACCAAGATCAATTG
TTGTGTTTTGGGGAGCTTGTTCCTACTGTGTAGCACATTTTGCGTGTGGG
ATATATTACACAAGCCTTCAAGGCAACACAAAA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1049:18418..22550+

>mRNA_D-mesarthrocarpus_Contig1049.5.2 ID=mRNA_D-mesarthrocarpus_Contig1049.5.2|Name=mRNA_D-mesarthrocarpus_Contig1049.5.2|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=939bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1049:18418..22550+ (Discosporangium mesarthrocarpum MT17_79)
ATGTCCAGGACGGGGAGGGGAGCAGGGTCAGGTGCAGGAGTAGGTTCAAC
ATCAATTTCATTTTCGGATACGGTTCAATGCTCCGATGGCTCCGTGTCCG
GAGTTAACGGCCAGGCTGAGAAGGAGCCCGCGTCTGGAGACCAGACCCCA
GCCGACTTTCTTGGGCCTCTCGATCGGGCAGGTGGCTGCACACTGTTGGT
CGTCAACGTGACCGCCACCTCCAGCGTGAAGTGCAAGCTGGACCTCCAGA
ACATCGTGATGAGGGCGCGTAATGCCGAGTACAACCCGAGGCGCTTCTCG
GCATGCGTGATCCGTCTGACCGACCCTAAGGCAACCGCTCTTGTCTTCAG
TTCGGGGAAAATGGTAGTAACAGGGTCGAAGTCGGAGTCAATGGCGCGCT
TGGCCTGCCGAAAGTTCAACAAGATCATTGAAAAGCTTGGCAATGACGTC
CAATTGAGCGACTTTGCCATTCAGAACATGGTGGCAACGACAGACGTGAA
GTTCCCCCTTCGCCTTGAGGGCCTGGTTGCATCCAGCCACAGCCAGTTCT
GCTCCTACGAGCCAGAGCTCTTCCCTGGGCTGATTTACAGGCTTGCTCAA
CCCAAGGTCTGCCTGCTCATCTTTGTCTCGGGCAAGGTGGTGCTGACTGG
AGGGAAATCTATTGCAAACCTGAGGGAGGCATTCATAGAGATGTACCCTG
TCCTCTGCAGCTTTAGAAAGAGTTCTGTTCTAGTGAACCACATCTCTTCC
TCCTCTACTTCTACTCCCTCCAAGTCCTCAAGCGGACCTGAGGGCTCTGG
GAACGACAGTGGGAGTGGGAGTGGTCGGGGTGGTGGAGAAGGTGGAGGGA
GCAGGACTGGAAAACGCCCACCTCAGGGGGCTGTCACTGGAGAGATGGCA
GGAACAGGTGGAGCTCGCAAGGCTGCAAAAATCACATGA
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