mRNA_D-mesarthrocarpus_Contig10481.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10481.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10481.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10481.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10481contigD-mesarthrocarpus_Contig10481:715..3865 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size1430
Hectar predicted targeting categoryother localisation
Exons3
Cds size726
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789185.447403-UTR-D-mesarthrocarpus_Contig10481:714..8141680789185.447403-UTR-D-mesarthrocarpus_Contig10481:714..814Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10481 715..814 -
1680789185.4811716-UTR-D-mesarthrocarpus_Contig10481:2493..30131680789185.4811716-UTR-D-mesarthrocarpus_Contig10481:2493..3013Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10481 2494..3013 -
1680789185.4908063-UTR-D-mesarthrocarpus_Contig10481:3781..38651680789185.4908063-UTR-D-mesarthrocarpus_Contig10481:3781..3865Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10481 3782..3865 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789185.4583197-CDS-D-mesarthrocarpus_Contig10481:814..10171680789185.4583197-CDS-D-mesarthrocarpus_Contig10481:814..1017Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10481 815..1017 -
1680789185.4702682-CDS-D-mesarthrocarpus_Contig10481:1970..24931680789185.4702682-CDS-D-mesarthrocarpus_Contig10481:1970..2493Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10481 1971..2493 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10481.1.1prot_D-mesarthrocarpus_Contig10481.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10481 815..2493 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10481.1.1

>prot_D-mesarthrocarpus_Contig10481.1.1 ID=prot_D-mesarthrocarpus_Contig10481.1.1|Name=mRNA_D-mesarthrocarpus_Contig10481.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=242bp
MTMANPEQTSWSPDTLPKVSFRAVYAIDGLEDLACPRSPVSDLPPGGGSG
FPEPQGRSDRCPGAKVEPVAAQGSPWQSKGVTLHHHGHGRRGSGMALGSG
RAMVELLRSELRVVDGAGVGLPAEKEAPFPEAAGRGGKEGVATRRGGGAA
DVERKIQPSRSCHLQVGVSLDPRLCGGSPQNEHQALCVKSPAPGGRDPRW
QRPLCELVWQPPCQGEGKGEGGGGCTARKRRRHRGRGRSRG*
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mRNA from alignment at D-mesarthrocarpus_Contig10481:715..3865-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10481.1.1 ID=mRNA_D-mesarthrocarpus_Contig10481.1.1|Name=mRNA_D-mesarthrocarpus_Contig10481.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3151bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10481:715..3865- (Discosporangium mesarthrocarpum MT17_79)
GGAGCGGCTGGTGTCGGAGGTTTCAGGGCTTGGGGAGGCGGTTGCTGCTG
CAGAGTCACTGGCATCCCAAGGGGAACAGCTGAAGTGCGTTCCTTTTGTC
ATTTTGTCCTGTTCATTTACGGGGTTAGGGTTATTTATGGTTGCAGTTAA
TGCATGGCGACAGTTAGGGTTAGGGTTAGGGTTAGGGTATGATCTTGTTT
ATTGTTGCCCTGTGCTTTACTTTGAAACTTGAGTTTAGGCTTTTAGGATT
AGGGTTAGGTCTCGTTTTTGTTTGTTTGCCCTCTGCCTCTGGTTTGAAAC
TAGTCCAGACATGTGCAATGAGATGTACGTCTGCAATTCCCATGCTTGGA
CTGTGGGCCTACCCCACAAAAAGGGGATTGGGGCTGAAATGAAACCCCTG
TTGGGAACATTAGAACAGAAGTACAGCAGAGCTAAGGGGCTTTTGGGGGG
GTAATGTGGGGTATAAGGGGTTGGGGTAAAGATTACAGTTGGCATCGGTT
CTGTCCAGCAACAACAAACAAAAAGAGTTGAAAGCAAGAATAGAACTAAA
CTAGATATCGACAAGATAACAAGCAAGGAACGGATGGTGTGATGTGTCAG
GGCAGGAACAGAAAAAAAAAAAGCAGGAACAAAAAAATGTCACTTTTTGC
TGCCCACTCCCTCTGAAACCCCCTCCAGCACCAAAGAATGAAATTATACA
GCAATCAACTCTTTTTGTTATTTTCTTTTTTTTGCCTGAACATGGGATAT
CAATTCCACCCCAGACCAAACCCCCTACCCTCATTCCATGTCACCCTAAC
AAAGCGATCTCTGGCTGACCTCCCCCCCTACCCCCTCACTGCCACATCCC
AGGGTGTTCGCAGCCTGGGCATCTTCCCACCTGCCCCATGTGGCTACCCC
CTCCCCCCTCCCCTTCTCCACCCCCAGCCCCTCCCTGACACCTGAGTCCA
CAATAGCTCCCCTGCCCACGGGTGGGACCAGGAGATCAAGCAACCTTGGA
ACACTGGCCAAGAGACCAAATGACTCCAGAGCACCAACACTGCTGCCACA
AGGCCGCACCCCTCGGCATGCCCCTGCCATAGCCCCAGCCCCACCCAGAC
TCCCTGCCCTGTCAAGGCCCTGGGCTGGTGAAGGGGGCGGGCATAATGAC
TCTGGAGGAGGAGGAGGAAGAGGGTTTGATAGTGGCTGGGGAGGGTTTCC
CCAGTGGACGTTGCGCATCTACCGCTCTAGGTCCAGCACCAGGGTCGACT
CCAACACCCTGGTGGCACAGATACATCCTGCCATTACCCTGCCTCCCCCC
CGCCGTCTCCTGTCCCCCCGCCTCCTCCCGGGGGGTTGTTCAGGGTCGGA
CTCCTTGTATAAAGCAGGGGATATGACCATGGCCAACCCCGAGCAAACCT
CATGGAGCCCCGACACCTTGCCAAAGGTGTCATTTCGTGCTGTGTACGCC
ATCGATGGCTTGGAAGACCTCGCTTGCCCCAGGTCCCCCGTGTCCGATTT
ACCTCCAGGCGGGGGAAGTGGCTTCCCTGAGCCACAGGGCCGGAGTGACA
GATGCCCTGGGGCCAAGGTAGAACCCGTGGCAGCTCAGGGCAGCCCATGG
CAGTCAAAGGGTGTCACCCTCCATCACCATGGCCACGGAAGGAGGGGGAG
TGGGATGGCGTTGGGTTCTGGTAGGGCCATGGTGGAGCTGCTGAGGAGTG
AGCTCCGGGTGGTGGATGGGGCAGGTGTTGGCTTGCCTGCAGAAAAAGAG
GCTCCCTTCCCTGAGGCTGCTGGTAGAGGGGGGAAAGAAGGGGTGGCTAC
ACGGCGTGGGGGGGGGGCAGCAGACGTTGAACGGAAAATTCAACCCAGTC
GCTCCTGCCATCTCCAGGTGGGGGTGTCATTAGATCCCAGGCTGTGTGAC
TTTGCTAGGGTTTTGTGGGTTAGGGATAAGGATAGGGATAGGGTCAGGGT
CAGGGCCAGGGTTAGGGTTAGGGTTAGGGCTAGGGTACCAAGCGCAGGCA
GTAGCATGGTGATGAGAGTGTCAGGGTTGCTTGTTTTCTGTGCCTTATTG
AGGTACAATAGTAATGTCAACGGGAGTATGTTCTTTGGTCACTGCAGAGT
AACCAACATGTATTTGGGGGGTGGGGGTGGTTATCCTGTGCTATAATTGT
GATGTAACTGTTCCACTCTGTAACCATTTCTTCCTGTAGGAGCACAATCT
TGTTGTTGGTGGTGGTGTTGTCACTGTTGTGGTTGATGACGATGACGTTG
CTTTAATCCTTGGCACTATTTGTTCAGAATACTGCCACAGCCGCTCGAAA
AAAGGCCACGTAGGTTTCACCCCCAAGATCCCAGTCACTTCTTTTTTTTT
TCCGGGAAGTGCACTTTTGAGTGCTATAGCTACCAAGAGGTTTCTATCAA
GTGCGCTTCGCGGTTCAAATTTCTTGTGTGTCACGGCAGTGTGCATAGTT
CCTGACAAGCTTCTTTCCTCGGACACTGTGCCTCGGTTGCTTCACAGGTA
GTACAGCGCTCTGTGTGAGGACTCCCCGAACCTCCTGAGAATACTGCTTG
AGTACTACTTCCCGAGTACTTCCCAAGTACTGATCCCTGAATACTTCCCG
AAACAGTCCACAAATGCCTCCTAAATACTCCACAATGAGCCCTTCAAAAT
ACTTTGAAACATACTTCACAGGATCACACAGGTATCGCTCTGTATCCTCA
CTGCTGGCTGCTCAATCAGTTACAGTACACTAGTGTCCCTTCCCTCAAAG
CTCCCCATGCCATCCAAGTAAGGGAGGGAATGACTCCCCTTGATTCCAAA
GCCTCTCCATGACCACAACCTTCCCTCTCCTTATTGCTGTCAACCAAGGT
GGTGGTTCACCTCAGAACGAGCACCAGGCTTTGTGTGTCAAGAGTCCTGC
ACCAGGGGGGAGAGATCCTCGATGGCAACGCCCCCTCTGCGAGCTTGTCT
GGCAACCGCCCTGCCAAGGGGAAGGAAAGGGGGAGGGGGGTGGAGGATGT
ACTGCCAGGAAGCGGAGGAGACACAGGGGGAGGGGCAGGAGCAGGGGCTG
AGTGGGGAGTCAGCAGTGAGGGAGGGGAGGAAGATGATATGTTCCCGGTG
TCGTGGGAAGCAGTTCCCCCCGCCTTGGACGCTTCCTCTGGTGGTGTCAC
G
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10481:715..3865-

>mRNA_D-mesarthrocarpus_Contig10481.1.1 ID=mRNA_D-mesarthrocarpus_Contig10481.1.1|Name=mRNA_D-mesarthrocarpus_Contig10481.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=726bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10481:715..3865- (Discosporangium mesarthrocarpum MT17_79)
ATGACCATGGCCAACCCCGAGCAAACCTCATGGAGCCCCGACACCTTGCC
AAAGGTGTCATTTCGTGCTGTGTACGCCATCGATGGCTTGGAAGACCTCG
CTTGCCCCAGGTCCCCCGTGTCCGATTTACCTCCAGGCGGGGGAAGTGGC
TTCCCTGAGCCACAGGGCCGGAGTGACAGATGCCCTGGGGCCAAGGTAGA
ACCCGTGGCAGCTCAGGGCAGCCCATGGCAGTCAAAGGGTGTCACCCTCC
ATCACCATGGCCACGGAAGGAGGGGGAGTGGGATGGCGTTGGGTTCTGGT
AGGGCCATGGTGGAGCTGCTGAGGAGTGAGCTCCGGGTGGTGGATGGGGC
AGGTGTTGGCTTGCCTGCAGAAAAAGAGGCTCCCTTCCCTGAGGCTGCTG
GTAGAGGGGGGAAAGAAGGGGTGGCTACACGGCGTGGGGGGGGGGCAGCA
GACGTTGAACGGAAAATTCAACCCAGTCGCTCCTGCCATCTCCAGGTGGG
GGTGTCATTAGATCCCAGGCTGTGTGGTGGTTCACCTCAGAACGAGCACC
AGGCTTTGTGTGTCAAGAGTCCTGCACCAGGGGGGAGAGATCCTCGATGG
CAACGCCCCCTCTGCGAGCTTGTCTGGCAACCGCCCTGCCAAGGGGAAGG
AAAGGGGGAGGGGGGTGGAGGATGTACTGCCAGGAAGCGGAGGAGACACA
GGGGGAGGGGCAGGAGCAGGGGCTGA
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