mRNA_D-mesarthrocarpus_Contig1048.8.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1048.8.1 vs. uniprot
Match: D7FY25_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY25_ECTSI) HSP 1 Score: 177 bits (449), Expect = 2.050e-49 Identity = 85/118 (72.03%), Postives = 99/118 (83.90%), Query Frame = 1
Query: 1 RERALLTSSSLDGISLVVDIQTGTQLASLKNNTVLAGGTALVGTDFVISTQAKGTALHFWALGTEQPRLKCHAPEKLGPLTVSGDGALCAGGGNSGRIYLWEVASGALVRRWDAHYKA 354
RE ALLTSS+ DG++ VVD+ TGTQL+SLK+ + G TAL+ DFV+S Q KGTA+HFWA GTEQPRLKCHAPEKLGPL V+GDG LCAGGG SGR+YLWEV+SG L+R WDAHYKA
Sbjct: 2 REVALLTSSAGDGLATVVDVLTGTQLSSLKHCSSQPGSTALIAGDFVVSAQVKGTAVHFWAWGTEQPRLKCHAPEKLGPLAVTGDGWLCAGGGVSGRVYLWEVSSGTLLRAWDAHYKA 119
BLAST of mRNA_D-mesarthrocarpus_Contig1048.8.1 vs. uniprot
Match: A0A6H5JBW7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBW7_9PHAE) HSP 1 Score: 166 bits (419), Expect = 7.270e-45 Identity = 80/138 (57.97%), Postives = 98/138 (71.01%), Query Frame = 3
Query: 351 GKRIILAVSALHFSPDGCFLLSGGEDAMLTSWNILEAVDVEGDGALKSG--------QSLGSDWTSSEHALPITCVHVGLVGGRAYTASLDRTAKVWESLSGQLLLSVAFPTFLRTVTTDPAEAFMFAGGAGGVIYQV 740
G++ AVSAL FSP+G FL SGGEDAM++SWN+L AVD +G A K SL + WTSSEH+LP+TC+H GGR Y+ SLDRTAK W++ SG+LLLSV P FL+ V TDPAEAF+F GG GG I+QV
Sbjct: 85 GRKRCKAVSALAFSPEGYFLFSGGEDAMVSSWNMLAAVDPDGGEAFKGXXXXXXXXKSSLPATWTSSEHSLPVTCLHAAKAGGRVYSCSLDRTAKAWDACSGRLLLSVTCPAFLKAVATDPAEAFLFTGGGGGTIFQV 222
BLAST of mRNA_D-mesarthrocarpus_Contig1048.8.1 vs. uniprot
Match: A0A835YRW0_9STRA (Quinon protein alcohol dehydrogenase-like superfamily (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRW0_9STRA) HSP 1 Score: 131 bits (330), Expect = 7.480e-33 Identity = 76/176 (43.18%), Postives = 100/176 (56.82%), Query Frame = 3
Query: 219 PGEAGPLDSIRGRGTMCRGREFWTHLPVGSGQRSPCSEVGRSL*GKRIILAVSALHFSPDGCFLLSGGEDAMLTSWNILEAVDVEGDGALKSGQSLG--SDWTSSEHALPITCVHVGLVGGRAYTASLDRTAKVWESLSGQLLLSVAFPTFLRTVTTDPAEAFMFAGGAGGVIYQV 740
P GPL ++ G G C G G R EVG LAVSAL FS DGCF+ SG EDAM + W +LEA+D + L +G S G ++W++ EH L +TC+ G R TASLDRTAK++E+ +G+++LSV P+ LR V D E F+F G A G IYQ+
Sbjct: 13 PERIGPL-AVSGDGAYCVGG--------GVSGRLYLWEVGSG------ALAVSALCFSLDGCFIFSGAEDAMASCWGVLEALDCDSGNTLMAGSSAGLTAEWSTGEHTLAVTCIGTSQAGDRLITASLDRTAKMYEAATGEVVLSVLCPSPLRAVCCDANENFLFMGAANGTIYQL 173
BLAST of mRNA_D-mesarthrocarpus_Contig1048.8.1 vs. uniprot
Match: A0A067CCG4_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CCG4_SAPPC) HSP 1 Score: 110 bits (276), Expect = 6.490e-25 Identity = 60/125 (48.00%), Postives = 79/125 (63.20%), Query Frame = 3
Query: 369 AVSALHFSPDGCFLLSGGEDAMLTSWNILEAVDVEGDGA-LKSGQSLGSDWTSSEHALPITCVHVGLVGGRAYTASLDRTAKVWESLSGQLLLSVAFPTFLRTVTTDPAEAFMFAGGAGGVIYQV 740
AVSAL +PD FL+SGGEDA++ W +L+ +D +G+ L G S WT +H LPIT VH G GGR +TASLDRTAKVW+ + G+ L+SV P+++ V D E +F G G IY V
Sbjct: 120 AVSALALTPDDAFLVSGGEDAVVHVWRLLDILDASHEGSTLNQGLSPLHTWT--DHVLPITHVHCGF-GGRIFTASLDRTAKVWDLVHGRALVSVTCPSYVNVVVPDAMEHRLFLGAGDGRIYVV 241
BLAST of mRNA_D-mesarthrocarpus_Contig1048.8.1 vs. uniprot
Match: A0A1V9ZLK9_9STRA (WD domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZLK9_9STRA) HSP 1 Score: 107 bits (268), Expect = 8.840e-24 Identity = 58/124 (46.77%), Postives = 74/124 (59.68%), Query Frame = 3
Query: 369 AVSALHFSPDGCFLLSGGEDAMLTSWNILEAVDVEGDGALKSGQSLGSDWTSSEHALPITCVHVGLVGGRAYTASLDRTAKVWESLSGQLLLSVAFPTFLRTVTTDPAEAFMFAGGAGGVIYQV 740
AVSAL +PD FL+SGGEDA++ W +L+ + DG Q L T ++H LPIT VH G GGR +TASLDRTAK+W+ +G L+SV P+FL D E +F G G IY V
Sbjct: 120 AVSALSMTPDDAFLVSGGEDAVVHVWRLLDILAAS-DGTSSLTQGLAPLHTWTDHVLPITHVHCGF-GGRVFTASLDRTAKIWDLYAGSALVSVTCPSFLNVCVPDAMEHRLFLGAGDGRIYVV 241
BLAST of mRNA_D-mesarthrocarpus_Contig1048.8.1 vs. uniprot
Match: A0A1V9ZVM6_9STRA (WD domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZVM6_9STRA) HSP 1 Score: 103 bits (258), Expect = 2.450e-22 Identity = 53/125 (42.40%), Postives = 74/125 (59.20%), Query Frame = 3
Query: 369 AVSALHFSPDGCFLLSGGEDAMLTSWNILEAVDVEGDG-ALKSGQSLGSDWTSSEHALPITCVHVGLVGGRAYTASLDRTAKVWESLSGQLLLSVAFPTFLRTVTTDPAEAFMFAGGAGGVIYQV 740
AVSAL +PD FL+SGGEDA++ W +L+ +D AL G S WT +H LPIT +H G GGR +T+SLDRT K+W+ +G ++S+ P+++ D E +F G G IY V
Sbjct: 123 AVSALSLTPDNAFLVSGGEDAVVHVWRLLDILDASNQSSALNQGLSPLHTWT--DHVLPITHIHCGF-GGRVFTSSLDRTTKIWDLFTGHSMVSITCPSYVNVCVPDAMEHRLFLGAGDGRIYVV 244
BLAST of mRNA_D-mesarthrocarpus_Contig1048.8.1 vs. uniprot
Match: A0A024TIW6_9STRA (Uncharacterized protein n=13 Tax=Aphanomyces TaxID=100860 RepID=A0A024TIW6_9STRA) HSP 1 Score: 102 bits (253), Expect = 1.180e-21 Identity = 55/127 (43.31%), Postives = 76/127 (59.84%), Query Frame = 3
Query: 369 AVSALHFSPDGCFLLSGGEDAMLTSWNILEAVDVEG-DGALKSGQSLGSDWTSSEHALPITCVHVGL--VGGRAYTASLDRTAKVWESLSGQLLLSVAFPTFLRTVTTDPAEAFMFAGGAGGVIYQV 740
AVSAL + D F++SGGEDA++ W +L+ +D D AL+S + WT +H LPIT +H GL V GR +T+SLDRT KV++ SG L+S+ P+F+ D E +F G G IY V
Sbjct: 120 AVSALRLTSDDAFVVSGGEDAVVHVWRLLDLLDASSTDSALQSSAAPVYTWT--DHVLPITSIHCGLGGVNGRVFTSSLDRTTKVYDIPSGSCLVSITCPSFINVCVADAMENRLFLGAGDGRIYVV 244
BLAST of mRNA_D-mesarthrocarpus_Contig1048.8.1 vs. uniprot
Match: A0A485L1F3_9STRA (Aste57867_14421 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L1F3_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 8.310e-21 Identity = 53/127 (41.73%), Postives = 76/127 (59.84%), Query Frame = 3
Query: 369 AVSALHFSPDGCFLLSGGEDAMLTSWNILEAVDVEG-DGALKSGQSLGSDWTSSEHALPITCVHVGLVG--GRAYTASLDRTAKVWESLSGQLLLSVAFPTFLRTVTTDPAEAFMFAGGAGGVIYQV 740
AVSAL + D F++SGG+DA++ W +L+ +D D AL+SG WT +H LPIT +H GL G GR +T+SLDRT KV++ +G ++S+ P+F+ D E +F G G IY V
Sbjct: 120 AVSALRLTSDDAFIVSGGDDAVVHVWRLLDLLDASSSDSALQSGAVPLHTWT--DHVLPITSIHCGLGGLNGRVFTSSLDRTVKVYDLATGANVVSITCPSFVNVCAADSMENRLFLGAGDGQIYTV 244
BLAST of mRNA_D-mesarthrocarpus_Contig1048.8.1 vs. uniprot
Match: A0A7R9BDJ2_9CRUS (Hypothetical protein n=1 Tax=Notodromas monacha TaxID=399045 RepID=A0A7R9BDJ2_9CRUS) HSP 1 Score: 100 bits (250), Expect = 1.710e-20 Identity = 56/136 (41.18%), Postives = 81/136 (59.56%), Query Frame = 3
Query: 354 KRIILAVSALHFSPDGCFLLSGGEDAMLTSWNILEAVDVEGDGALKSGQSLGSDWTSSEHALPITCVHVGLVGG--RAYTASLDRTAKVWESLSGQLLLSVAFPTFLRTVTTDPAEAFMFAGGAGGVIYQVCMCWP 755
+R VS++ F+ DGC +SGG D+++ W+ EA+ + A S W ++HALP+TCV VG G R +TASLD++ KV++ +SGQLLLSV F + V DP E+ +FAGG G I+ V + P
Sbjct: 678 RRHYQPVSSIKFTDDGCLFVSGGTDSLVIVWSTAEALAGSYEAAGDEACSPEHVW--ADHALPVTCVAVGKGGSSARVFTASLDQSCKVFDLVSGQLLLSVIFDVRIMCVCVDPVESTLFAGGQDGSIFVVNLRNP 811
BLAST of mRNA_D-mesarthrocarpus_Contig1048.8.1 vs. uniprot
Match: D3BSJ3_POLPP (WD40 repeat-containing protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BSJ3_POLPP) HSP 1 Score: 100 bits (248), Expect = 2.340e-20 Identity = 50/124 (40.32%), Postives = 76/124 (61.29%), Query Frame = 3
Query: 372 VSALHFSPDGCFLLSGGEDAMLTSWNILEAVDVEGDGALKSGQSLGSDWTSSEHALPITCVHVGLVG--GRAYTASLDRTAKVWESLSGQLLLSVAFPTFLRTVTTDPAEAFMFAGGAGGVIYQ 737
++A+ F+ D FLL+GG+D ++ W++ +D E L+ QS S+HAL IT +H G G R Y+ SLDRT +VW+ + G+ + S+ +PT+L TVT D AE ++ GG G+IYQ
Sbjct: 64 ITAVTFTKDDSFLLTGGDDGVINCWSLESILDRE-QTVLRVKQSF------SDHALGITAIHCGYGGFNSRFYSVSLDRTCRVWDLVQGKSIASIVYPTYLTTVTVDAAETSVYVGGGDGIIYQ 180 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1048.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1048.8.1 >prot_D-mesarthrocarpus_Contig1048.8.1 ID=prot_D-mesarthrocarpus_Contig1048.8.1|Name=mRNA_D-mesarthrocarpus_Contig1048.8.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=110bp MLTSWNILEAVDVEGDGALKSGQSLGSDWTSSEHALPITCVHVGLVGGRAback to top mRNA from alignment at D-mesarthrocarpus_Contig1048:20752..24573+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig1048.8.1 ID=mRNA_D-mesarthrocarpus_Contig1048.8.1|Name=mRNA_D-mesarthrocarpus_Contig1048.8.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3822bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1048:20752..24573+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1048:20752..24573+ >mRNA_D-mesarthrocarpus_Contig1048.8.1 ID=mRNA_D-mesarthrocarpus_Contig1048.8.1|Name=mRNA_D-mesarthrocarpus_Contig1048.8.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=330bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1048:20752..24573+ (Discosporangium mesarthrocarpum MT17_79)back to top |