mRNA_D-mesarthrocarpus_Contig10477.3.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10477.3.1
Unique NamemRNA_D-mesarthrocarpus_Contig10477.3.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig10477.3.1 vs. uniprot
Match: A0A6H5L179_9PHAE (Aurora kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L179_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 2.500e-7
Identity = 52/172 (30.23%), Postives = 73/172 (42.44%), Query Frame = 1 
Query:  100 ALSSLSEAWYPLHQSLWGMLDSLRSKTPKVLLRLCGPMPVDSHPGSPTTRGSQLTGNATREWKGCHFKGARTGDVWGQGRSVGXXXXXXXXXHNEPQPHQLLEDDRDGALVCTLMDNLPQPEYIAMFPDGASLLVSPRRGILRLEVPLAQGRSGAGDDGVWLWRLGPGGTWP 615
            +L +L  A +PL++SL G++D+LRSKTPKV+LR                 G  + G A                                       P Q  E   +   +C LM+NLP P++ A F DGASL +  R+G LR+E+P  + RS         W +  GG WP
Sbjct:  971 SLDALPAALHPLYRSLAGIVDALRSKTPKVVLRRDXXXXXXXXXXXXXQAG--VPGRA---------------------------------------PQQRAE---EKLTLCALMENLPDPDFAAAFADGASLSLWTRKGELRVELPGGRVRS---------WAVAAGGEWP 1089
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BLAST of mRNA_D-mesarthrocarpus_Contig10477.3.1 vs. uniprot
Match: D7FZ88_ECTSI (Aurora kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ88_ECTSI)

HSP 1 Score: 62.8 bits (151), Expect = 5.690e-7
Identity = 51/172 (29.65%), Postives = 71/172 (41.28%), Query Frame = 1 
Query:  100 ALSSLSEAWYPLHQSLWGMLDSLRSKTPKVLLRLCGPMPVDSHPGSPTTRGSQLTGNATREWKGCHFKGARTGDVWGQGRSVGXXXXXXXXXHNEPQPHQLLEDDRDGALVCTLMDNLPQPEYIAMFPDGASLLVSPRRGILRLEVPLAQGRSGAGDDGVWLWRLGPGGTWP 615
            +L +L  A +PL++SL G++D+LRSKTPKV+LR                                     R           G              P Q  E   +   +C LM+NLP P++ A F DGASL +  R+G LR+E+P  + RS         W +  GG WP
Sbjct:  703 SLDALPAALHPLYRSLAGIVDALRSKTPKVVLR-------------------------------------RDXXXXXXXXQAGVPGRA---------PQQRAE---EKFTLCALMENLPDPDFAAAFADGASLSLWTRKGELRVELPGGRVRS---------WAVAAGGEWP 816
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10477.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L179_9PHAE2.500e-730.23Aurora kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7FZ88_ECTSI5.690e-729.65Aurora kinase n=1 Tax=Ectocarpus siliculosus TaxID... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10477contigD-mesarthrocarpus_Contig10477:2040..3119 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FZ88
PFAMsPOLO_box,Pkinase
Model size1082
Max annot lvl2759|Eukaryota
KEGG koko:K06660,ko:K08863
KEGG Pathwayko04068,ko04111,ko04113,map04068,map04111,map04113
Hectar predicted targeting categoryother localisation
Exons1
Evalue9.32e-08
EggNOG OGsKOG0575@1|root,KOG0575@2759|Eukaryota
EC2.7.11.21
Descriptionregulation of centriole replication
Cds size1080
COG categoryT
BRITEko00000,ko00001,ko01000,ko01001,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789184.9193792-CDS-D-mesarthrocarpus_Contig10477:2039..31191680789184.9193792-CDS-D-mesarthrocarpus_Contig10477:2039..3119Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10477 2040..3119 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10477.3.1prot_D-mesarthrocarpus_Contig10477.3.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10477 2040..3119 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10477.3.1

>prot_D-mesarthrocarpus_Contig10477.3.1 ID=prot_D-mesarthrocarpus_Contig10477.3.1|Name=mRNA_D-mesarthrocarpus_Contig10477.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=360bp
QGQGLAPGEAPVGLTTQKHEDRDSGPGNRGGSVALSSLSEAWYPLHQSLW
GMLDSLRSKTPKVLLRLCGPMPVDSHPGSPTTRGSQLTGNATREWKGCHF
KGARTGDVWGQGRSVGHGRSVGHGRHNEPQPHQLLEDDRDGALVCTLMDN
LPQPEYIAMFPDGASLLVSPRRGILRLEVPLAQGRSGAGDDGVWLWRLGP
GGTWPNDIGELTPPGAGPGQPAPRDMGGRAWKAGGGSRRGDKELAATGLP
SADWGEIWAYLWAGKHGFFLCLRAERATYRSGGPFPLEWEEALPSMGGGV
LPWCNQALSRSCSPLAPECHPSPREQAPGPDSMPQKVTASPSCGWESIQD
CQLLFGNGTS
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mRNA from alignment at D-mesarthrocarpus_Contig10477:2040..3119+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10477.3.1 ID=mRNA_D-mesarthrocarpus_Contig10477.3.1|Name=mRNA_D-mesarthrocarpus_Contig10477.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1080bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10477:2040..3119+ (Discosporangium mesarthrocarpum MT17_79)
CAGGGGCAGGGGTTGGCACCCGGGGAAGCACCGGTGGGGTTGACAACTCA
GAAGCATGAGGATCGGGATTCCGGGCCCGGGAACAGGGGAGGTTCTGTGG
CCCTCAGCTCCCTTTCTGAAGCCTGGTATCCCCTGCACCAGAGCCTCTGG
GGGATGTTGGATTCTCTCCGGAGCAAGACCCCCAAGGTGCTCCTGCGGCT
CTGTGGCCCGATGCCCGTGGACTCCCATCCAGGCTCCCCCACGACCCGTG
GCAGCCAGCTGACAGGGAATGCCACCAGGGAATGGAAGGGTTGCCATTTC
AAGGGTGCGAGGACCGGGGATGTTTGGGGCCAGGGCAGGAGTGTGGGACA
TGGTAGGAGTGTGGGACATGGTAGGCACAATGAACCCCAACCCCATCAGC
TCCTTGAAGACGATAGGGATGGCGCGTTGGTGTGCACCCTCATGGACAAC
CTACCCCAGCCTGAGTACATCGCCATGTTCCCGGACGGCGCCTCTCTCCT
GGTCTCTCCACGTAGGGGGATCCTGAGGCTTGAAGTTCCTTTGGCCCAGG
GGCGATCTGGAGCGGGGGACGATGGGGTCTGGTTGTGGCGCCTCGGTCCT
GGGGGCACCTGGCCAAATGACATTGGGGAATTAACCCCCCCTGGGGCGGG
GCCGGGGCAGCCAGCTCCTAGAGACATGGGAGGTAGGGCGTGGAAGGCTG
GGGGAGGGTCTAGGCGAGGGGACAAAGAGCTGGCGGCAACAGGCCTGCCA
AGTGCTGATTGGGGTGAGATTTGGGCGTACCTGTGGGCTGGGAAGCATGG
CTTCTTCCTGTGCCTCCGAGCAGAGCGGGCAACCTATCGCAGTGGAGGCC
CCTTCCCACTGGAGTGGGAGGAGGCTCTGCCATCAATGGGCGGGGGGGTT
CTGCCGTGGTGTAATCAGGCATTGTCACGGTCGTGCTCCCCCCTGGCCCC
AGAATGCCACCCCAGCCCACGCGAACAAGCCCCAGGGCCTGATTCAATGC
CACAGAAGGTGACAGCATCGCCTAGCTGTGGTTGGGAAAGTATCCAGGAC
TGCCAGCTCCTGTTTGGTAACGGGACAAGT
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10477:2040..3119+

>mRNA_D-mesarthrocarpus_Contig10477.3.1 ID=mRNA_D-mesarthrocarpus_Contig10477.3.1|Name=mRNA_D-mesarthrocarpus_Contig10477.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1080bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10477:2040..3119+ (Discosporangium mesarthrocarpum MT17_79)
CAGGGGCAGGGGTTGGCACCCGGGGAAGCACCGGTGGGGTTGACAACTCA
GAAGCATGAGGATCGGGATTCCGGGCCCGGGAACAGGGGAGGTTCTGTGG
CCCTCAGCTCCCTTTCTGAAGCCTGGTATCCCCTGCACCAGAGCCTCTGG
GGGATGTTGGATTCTCTCCGGAGCAAGACCCCCAAGGTGCTCCTGCGGCT
CTGTGGCCCGATGCCCGTGGACTCCCATCCAGGCTCCCCCACGACCCGTG
GCAGCCAGCTGACAGGGAATGCCACCAGGGAATGGAAGGGTTGCCATTTC
AAGGGTGCGAGGACCGGGGATGTTTGGGGCCAGGGCAGGAGTGTGGGACA
TGGTAGGAGTGTGGGACATGGTAGGCACAATGAACCCCAACCCCATCAGC
TCCTTGAAGACGATAGGGATGGCGCGTTGGTGTGCACCCTCATGGACAAC
CTACCCCAGCCTGAGTACATCGCCATGTTCCCGGACGGCGCCTCTCTCCT
GGTCTCTCCACGTAGGGGGATCCTGAGGCTTGAAGTTCCTTTGGCCCAGG
GGCGATCTGGAGCGGGGGACGATGGGGTCTGGTTGTGGCGCCTCGGTCCT
GGGGGCACCTGGCCAAATGACATTGGGGAATTAACCCCCCCTGGGGCGGG
GCCGGGGCAGCCAGCTCCTAGAGACATGGGAGGTAGGGCGTGGAAGGCTG
GGGGAGGGTCTAGGCGAGGGGACAAAGAGCTGGCGGCAACAGGCCTGCCA
AGTGCTGATTGGGGTGAGATTTGGGCGTACCTGTGGGCTGGGAAGCATGG
CTTCTTCCTGTGCCTCCGAGCAGAGCGGGCAACCTATCGCAGTGGAGGCC
CCTTCCCACTGGAGTGGGAGGAGGCTCTGCCATCAATGGGCGGGGGGGTT
CTGCCGTGGTGTAATCAGGCATTGTCACGGTCGTGCTCCCCCCTGGCCCC
AGAATGCCACCCCAGCCCACGCGAACAAGCCCCAGGGCCTGATTCAATGC
CACAGAAGGTGACAGCATCGCCTAGCTGTGGTTGGGAAAGTATCCAGGAC
TGCCAGCTCCTGTTTGGTAACGGGACAAGT
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