mRNA_D-mesarthrocarpus_Contig10462.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10462.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig10462.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10462.2.1 vs. uniprot
Match: A0A848W338_9PROT (Elongation factor 4 n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A848W338_9PROT)

HSP 1 Score: 729 bits (1882), Expect = 1.750e-260
Identity = 364/451 (80.71%), Postives = 408/451 (90.47%), Query Frame = 1
Query:    1 MTDLSHIRNFAIIAHIDHGKSTLADRLIQECDGLTQREMREQVLDSMDLERERGITIKAHSVRLTYKAQNGETYQLNLMDTPGHVDFGYEVSRSLAAVEGSLLVVDSSQGVEAQTLANAYLAIDAGHEIVPVLNKIDLPAAEPEQVRQQIEDVIGLDASEAIPVSAKSGQGIREVLESVIAKLPAPAGDPAAPLQALLVDSWYDPYLGVVALVRVREGSLKKGQKIRMMATGRAYQVDRVGVHTPARTETGALGPGEIGFITASIKAVADCQVGDTVTDDRVPAETPLPGFKPSVPVVFSSLFPADAAQFEDLREALGKLHLNDASFHYDAESSAALGFGFRCGFLGLLHMEIIQERIEREFDIDLIATAPSVVYKITLNNGSTIDLHNPSDFPDVVKIAEIEEPWIKASIMVPDTYLGAVLTLCTERRGEQVDLTYVAGRAMVVYRLPLN 1353
            MTDL+HIRNFAIIAHIDHGKSTLADRLIQ C GL+ REM EQVLDSM+LERERGITIKA +VRLTYKA++G TY LNLMDTPGHVDF YEVSRSLAA EGSLLVVDSSQGVEAQTLANAYLAIDAGHEIVPVLNKIDLPA+EP++VR+QIE+VIGLDASEA+ +SAKSG GI +VLE+++ +LP+P GD  A  +ALLVDSWYDPYLGVVALVRV+ G L KGQKIRMMATG++YQ+DR+GV TPARTE   LGPGEIGFITASIKAVADCQVGDTVTDDR P E PL GFKPSVPVVF SLFPADAA++EDLRE+L KLHLNDASFH+D E+SAALG GFRCGFLGLLHMEI+QER+EREFD+DLIATAPSV+YKI L +G+TIDLHNPSDFPDV +I  I+EPWIKA+I+VPD YLG++L LCT+RRGEQ+DLTYV GRAM  YRLPLN
Sbjct:    1 MTDLTHIRNFAIIAHIDHGKSTLADRLIQHCGGLSAREMSEQVLDSMELERERGITIKAQTVRLTYKAKDGITYALNLMDTPGHVDFSYEVSRSLAACEGSLLVVDSSQGVEAQTLANAYLAIDAGHEIVPVLNKIDLPASEPQKVREQIEEVIGLDASEAVEMSAKSGVGIEDVLEALVKRLPSPEGDADALTEALLVDSWYDPYLGVVALVRVKNGRLAKGQKIRMMATGKSYQIDRIGVFTPARTELDTLGPGEIGFITASIKAVADCQVGDTVTDDRNPVEIPLAGFKPSVPVVFCSLFPADAAEYEDLRESLAKLHLNDASFHFDPENSAALGVGFRCGFLGLLHMEIVQERLEREFDLDLIATAPSVIYKIHLTDGTTIDLHNPSDFPDVTRITNIDEPWIKANIIVPDEYLGSILQLCTDRRGEQLDLTYVGGRAMATYRLPLN 451          
BLAST of mRNA_D-mesarthrocarpus_Contig10462.2.1 vs. uniprot
Match: A0A2E7PMD3_9PROT (Elongation factor 4 n=5 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E7PMD3_9PROT)

HSP 1 Score: 710 bits (1833), Expect = 4.920e-253
Identity = 356/451 (78.94%), Postives = 400/451 (88.69%), Query Frame = 1
Query:    1 MTDLSHIRNFAIIAHIDHGKSTLADRLIQECDGLTQREMREQVLDSMDLERERGITIKAHSVRLTYKAQNGETYQLNLMDTPGHVDFGYEVSRSLAAVEGSLLVVDSSQGVEAQTLANAYLAIDAGHEIVPVLNKIDLPAAEPEQVRQQIEDVIGLDASEAIPVSAKSGQGIREVLESVIAKLPAPAGDPAAPLQALLVDSWYDPYLGVVALVRVREGSLKKGQKIRMMATGRAYQVDRVGVHTPARTETGALGPGEIGFITASIKAVADCQVGDTVTDDRVPAETPLPGFKPSVPVVFSSLFPADAAQFEDLREALGKLHLNDASFHYDAESSAALGFGFRCGFLGLLHMEIIQERIEREFDIDLIATAPSVVYKITLNNGSTIDLHNPSDFPDVVKIAEIEEPWIKASIMVPDTYLGAVLTLCTERRGEQVDLTYVAGRAMVVYRLPLN 1353
            MTDLSHIRNF+I+AHIDHGKSTLADRLIQEC GLT+REM+EQVLD+M+LERERGITIKA +VRL Y A++ ETY LNLMDTPGHVDF YEVSRSLAA EG+LLVVD+SQGVEAQTLANAYLAIDA  E+VPVLNK+DLPAAEPE++R QIEDVIGLDASEA+ +SAK+G GI  VLE+++ ++P P GD  A LQALLVDSWYD YLGVVALVRV+ G+LKKGQKIRMM+ GR Y VDRVGV TPARTE   LGPGEIGFITA IK VADC VGDT+TDDR PA   LPGFKPSVPVVFSSL+PAD+A++EDLREALG+LHLNDASF Y+AESSAALG GFRCGFLGLLHMEIIQ+R+EREFD+++IATAPSVVY+ITL +G  I LHNPSD+P+V +I  I EPWIKASIMVPD YLGAVL LCTERRGEQV+LTYV GRAM VYRLPLN
Sbjct:    1 MTDLSHIRNFSIVAHIDHGKSTLADRLIQECGGLTEREMQEQVLDNMELERERGITIKAQTVRLVYTAKDNETYHLNLMDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANAYLAIDADLELVPVLNKVDLPAAEPERIRTQIEDVIGLDASEALEISAKTGLGIANVLEAIVTQMPPPEGDADADLQALLVDSWYDSYLGVVALVRVKHGTLKKGQKIRMMSNGRTYPVDRVGVFTPARTEIDVLGPGEIGFITAQIKTVADCNVGDTITDDRRPAAEALPGFKPSVPVVFSSLYPADSAEYEDLREALGRLHLNDASFEYEAESSAALGMGFRCGFLGLLHMEIIQQRLEREFDLEIIATAPSVVYRITLTDGEEIALHNPSDYPEVTRIETIAEPWIKASIMVPDEYLGAVLQLCTERRGEQVELTYVGGRAMAVYRLPLN 451          
BLAST of mRNA_D-mesarthrocarpus_Contig10462.2.1 vs. uniprot
Match: A0A2S6QLW5_9PROT (Elongation factor 4 n=1 Tax=Alphaproteobacteria bacterium MarineAlpha12_Bin1 TaxID=2013107 RepID=A0A2S6QLW5_9PROT)

HSP 1 Score: 703 bits (1815), Expect = 2.680e-250
Identity = 350/451 (77.61%), Postives = 402/451 (89.14%), Query Frame = 1
Query:    1 MTDLSHIRNFAIIAHIDHGKSTLADRLIQECDGLTQREMREQVLDSMDLERERGITIKAHSVRLTYKAQNGETYQLNLMDTPGHVDFGYEVSRSLAAVEGSLLVVDSSQGVEAQTLANAYLAIDAGHEIVPVLNKIDLPAAEPEQVRQQIEDVIGLDASEAIPVSAKSGQGIREVLESVIAKLPAPAGDPAAPLQALLVDSWYDPYLGVVALVRVREGSLKKGQKIRMMATGRAYQVDRVGVHTPARTETGALGPGEIGFITASIKAVADCQVGDTVTDDRVPAETPLPGFKPSVPVVFSSLFPADAAQFEDLREALGKLHLNDASFHYDAESSAALGFGFRCGFLGLLHMEIIQERIEREFDIDLIATAPSVVYKITLNNGSTIDLHNPSDFPDVVKIAEIEEPWIKASIMVPDTYLGAVLTLCTERRGEQVDLTYVAGRAMVVYRLPLN 1353
            MTDLSHIRNFAIIAHIDHGKSTLADRLIQ C GL+ REM EQVLDSM+LE+ERGITIKA +V LTYK++ GETY+LNLMDTPGHVDF YEVSRSLAA EGSLL+VD+SQGVEAQTLANAYLAIDA HEI+PVLNKIDLPA+EP +VR+QIE+VIGLDA+ AI VSAKSGQGI +VLES+I  LP+P GD    LQALL+DSWYD YLGVVALVRV+ G + KGQKIRMMA G++YQ+DRVGV TPARTE   LGPGEIGF+TASI+AVADCQVGDT+TDD+ P  T L GFKPSVPVVF S+FP+DAA++EDLR++L KLHLNDASFH++AESSAALG GFRCGFLGLLHMEI+Q+R++REF+++L+ATAPSVVY I L +G+ +DLHNPSDFPDV KI +IEEPWIKA+I+VPD YLGAVL LCT+RRGEQ+DLTYV  RAM VYRLPLN
Sbjct:    1 MTDLSHIRNFAIIAHIDHGKSTLADRLIQHCGGLSAREMSEQVLDSMELEKERGITIKAQTVCLTYKSRLGETYELNLMDTPGHVDFSYEVSRSLAACEGSLLIVDASQGVEAQTLANAYLAIDANHEIIPVLNKIDLPASEPLKVREQIEEVIGLDANNAIEVSAKSGQGIEDVLESLITNLPSPKGDEDTLLQALLIDSWYDSYLGVVALVRVKNGKIIKGQKIRMMAAGKSYQIDRVGVFTPARTEKSELGPGEIGFLTASIRAVADCQVGDTITDDKNPVNTALAGFKPSVPVVFCSVFPSDAAEYEDLRDSLEKLHLNDASFHFEAESSAALGLGFRCGFLGLLHMEIVQQRLQREFNLELVATAPSVVYSIHLTDGNQLDLHNPSDFPDVTKINKIEEPWIKANIIVPDDYLGAVLQLCTDRRGEQIDLTYVGNRAMAVYRLPLN 451          
BLAST of mRNA_D-mesarthrocarpus_Contig10462.2.1 vs. uniprot
Match: A0A2N3PQR6_9PROT (Elongation factor 4 n=5 Tax=root TaxID=1 RepID=A0A2N3PQR6_9PROT)

HSP 1 Score: 685 bits (1767), Expect = 5.280e-243
Identity = 337/451 (74.72%), Postives = 391/451 (86.70%), Query Frame = 1
Query:    1 MTDLSHIRNFAIIAHIDHGKSTLADRLIQECDGLTQREMREQVLDSMDLERERGITIKAHSVRLTYKAQNGETYQLNLMDTPGHVDFGYEVSRSLAAVEGSLLVVDSSQGVEAQTLANAYLAIDAGHEIVPVLNKIDLPAAEPEQVRQQIEDVIGLDASEAIPVSAKSGQGIREVLESVIAKLPAPAGDPAAPLQALLVDSWYDPYLGVVALVRVREGSLKKGQKIRMMATGRAYQVDRVGVHTPARTETGALGPGEIGFITASIKAVADCQVGDTVTDDRVPAETPLPGFKPSVPVVFSSLFPADAAQFEDLREALGKLHLNDASFHYDAESSAALGFGFRCGFLGLLHMEIIQERIEREFDIDLIATAPSVVYKITLNNGSTIDLHNPSDFPDVVKIAEIEEPWIKASIMVPDTYLGAVLTLCTERRGEQVDLTYVAGRAMVVYRLPLN 1353
            MTDL HIRNFAIIAHIDHGKSTLADRLIQ+C G+ +REMR+Q+LDSMD+ERERGITIKA +VRL YKA++GETY+LNLMDTPGHVDF YEVSRSLAA EGSLLVVD+SQGVEAQTLAN Y AI+  HEIVPVLNKIDLPAAEPE+++QQIEDVIGLD S A+ +SAK+G GI +VLE+++ +LP+P GD  APLQALLVDSWYD YLGV+ LVRV+ G L+KGQKIRMM TG +YQVD VG  TP   +  AL PGEIGF+ ASIKAVADC+VGDT+TD++ PA+ PLPGFKP+VPVVF  LFP DAA FEDLR++L KL LNDASF Y+AE+SAALGFGFRCGFLGLLH+EIIQER+EREF++DLI TAPSVVY+I L NG  + LHNP+D P+V K+A+IEEPWIKA+IMVPD +LG +L LCTERRG Q+DLTY   RAMVVYRLPLN
Sbjct:    1 MTDLKHIRNFAIIAHIDHGKSTLADRLIQKCGGIEEREMRDQILDSMDIERERGITIKAQTVRLAYKAKDGETYELNLMDTPGHVDFAYEVSRSLAACEGSLLVVDASQGVEAQTLANVYQAIENNHEIVPVLNKIDLPAAEPERIKQQIEDVIGLDTSNAVMISAKTGLGIEDVLEALVTRLPSPQGDADAPLQALLVDSWYDSYLGVIILVRVKHGILRKGQKIRMMNTGASYQVDGVGYFTPKMVQVDALNPGEIGFLQASIKAVADCEVGDTITDEKRPADKPLPGFKPNVPVVFCGLFPVDAADFEDLRDSLSKLRLNDASFEYEAETSAALGFGFRCGFLGLLHLEIIQERLEREFNLDLITTAPSVVYRIELTNGEQVQLHNPADMPEVTKMAKIEEPWIKATIMVPDEFLGPILQLCTERRGVQLDLTYAGNRAMVVYRLPLN 451          
BLAST of mRNA_D-mesarthrocarpus_Contig10462.2.1 vs. uniprot
Match: K2ELA8_9BACT (Elongation factor 4 n=3 Tax=Bacteria TaxID=2 RepID=K2ELA8_9BACT)

HSP 1 Score: 683 bits (1763), Expect = 2.140e-242
Identity = 340/451 (75.39%), Postives = 397/451 (88.03%), Query Frame = 1
Query:    1 MTDLSHIRNFAIIAHIDHGKSTLADRLIQECDGLTQREMREQVLDSMDLERERGITIKAHSVRLTYKAQNGETYQLNLMDTPGHVDFGYEVSRSLAAVEGSLLVVDSSQGVEAQTLANAYLAIDAGHEIVPVLNKIDLPAAEPEQVRQQIEDVIGLDASEAIPVSAKSGQGIREVLESVIAKLPAPAGDPAAPLQALLVDSWYDPYLGVVALVRVREGSLKKGQKIRMMATGRAYQVDRVGVHTPARTETGALGPGEIGFITASIKAVADCQVGDTVTDDRVPAETPLPGFKPSVPVVFSSLFPADAAQFEDLREALGKLHLNDASFHYDAESSAALGFGFRCGFLGLLHMEIIQERIEREFDIDLIATAPSVVYKITLNNGSTIDLHNPSDFPDVVKIAEIEEPWIKASIMVPDTYLGAVLTLCTERRGEQVDLTYVAGRAMVVYRLPLN 1353
            MTDLSHIRNF+IIAHIDHGKSTLADRLIQ C GL++RE++EQVLDSMDLERERGITIKA +VRLTYKA+NGETYQLNLMDTPGHVDF YEVSRSLAA EGSLLVVD+SQGVEAQTLAN Y AI+  HEI+PVLNKIDLPAA+PE+V+ QIEDVIGLDAS+A+ VSAK+G G+ +VLE+++ +LP P GD  APL+ALLVDSWYDPYLGVV LVR+ +G LK G KI+MM+TG AY VD+VGV TP R    AL PGEIGF TA IKAV+DC VGDT+T+++ PA+ PLPGFKPSVPVVF  LFPAD+A+FE LRE+L KL LNDASF ++ ESSAALGFGFRCGFLGLLH+EI+QER+EREF++DL+ TAPSVVYK+ + +G  ++LHNP+D PDVVKIA++EEPWIKA+I+VPD YLG+VLTLCTERRG Q+DLTYV  RAMVVYRLPLN
Sbjct:    1 MTDLSHIRNFSIIAHIDHGKSTLADRLIQLCGGLSERELKEQVLDSMDLERERGITIKAQTVRLTYKAKNGETYQLNLMDTPGHVDFAYEVSRSLAACEGSLLVVDASQGVEAQTLANVYQAIENNHEIIPVLNKIDLPAADPERVKTQIEDVIGLDASQALLVSAKTGVGVPDVLEALVHRLPPPQGDRDAPLKALLVDSWYDPYLGVVILVRIVDGVLKPGLKIKMMSTGSAYPVDQVGVFTPKRETLSALVPGEIGFFTAGIKAVSDCNVGDTLTEEKRPAKAPLPGFKPSVPVVFCGLFPADSAEFEHLRESLAKLRLNDASFMFEPESSAALGFGFRCGFLGLLHLEIVQERLEREFNLDLVTTAPSVVYKLQMTSGQALELHNPADMPDVVKIAKMEEPWIKATILVPDEYLGSVLTLCTERRGVQLDLTYVGNRAMVVYRLPLN 451          
BLAST of mRNA_D-mesarthrocarpus_Contig10462.2.1 vs. uniprot
Match: A0A6A7KJ86_9PROT (Elongation factor 4 n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6A7KJ86_9PROT)

HSP 1 Score: 682 bits (1760), Expect = 6.120e-242
Identity = 333/451 (73.84%), Postives = 397/451 (88.03%), Query Frame = 1
Query:    1 MTDLSHIRNFAIIAHIDHGKSTLADRLIQECDGLTQREMREQVLDSMDLERERGITIKAHSVRLTYKAQNGETYQLNLMDTPGHVDFGYEVSRSLAAVEGSLLVVDSSQGVEAQTLANAYLAIDAGHEIVPVLNKIDLPAAEPEQVRQQIEDVIGLDASEAIPVSAKSGQGIREVLESVIAKLPAPAGDPAAPLQALLVDSWYDPYLGVVALVRVREGSLKKGQKIRMMATGRAYQVDRVGVHTPARTETGALGPGEIGFITASIKAVADCQVGDTVTDDRVPAETPLPGFKPSVPVVFSSLFPADAAQFEDLREALGKLHLNDASFHYDAESSAALGFGFRCGFLGLLHMEIIQERIEREFDIDLIATAPSVVYKITLNNGSTIDLHNPSDFPDVVKIAEIEEPWIKASIMVPDTYLGAVLTLCTERRGEQVDLTYVAGRAMVVYRLPLN 1353
            MTDL+HIRNFAIIAHIDHGKSTLADRLIQ C GLT+REM++QVLDSM+LERERGITIKA +VRL Y A+NGE Y+LNLMDTPGHVDF YEVSRSLAA EGSLL+VD++QGVEAQTLANAYLAID  HEI+PVLNKIDLP+AEPE++RQQIEDV+G+DASEAI VSAK+GQGI +VLE+++ KLP P GD AAPL+ALLVDSWYD YLGVV LVRV +G + KG KI MM+TG  +++DRVG+ TP      +LGPGE+GFITASIK+VADC+VGDT+T  R  A TPLPGFKP+VPVVF  LFP D+A +EDLR++LGKL LND+S HY+ ESSAALGFG+RCG LGLLH+EI+QER++REFD+DLI TAPSVVY+I + +GS +DLHNP+D+PDVV+IA IEEPWI+A+I+VPD YLG++L+LCTERRGEQ++LTYV  RAM+VY LPLN
Sbjct:    1 MTDLAHIRNFAIIAHIDHGKSTLADRLIQHCGGLTEREMQDQVLDSMELERERGITIKAQTVRLNYTAKNGELYELNLMDTPGHVDFSYEVSRSLAACEGSLLIVDAAQGVEAQTLANAYLAIDNNHEIIPVLNKIDLPSAEPERIRQQIEDVVGIDASEAIQVSAKTGQGIPDVLEALVHKLPPPKGDSAAPLRALLVDSWYDSYLGVVILVRVVDGEVSKGMKIEMMSTGALHEIDRVGIFTPKSEMVASLGPGEMGFITASIKSVADCKVGDTLTGARKKAATPLPGFKPTVPVVFCGLFPVDSADYEDLRDSLGKLALNDSSLHYEPESSAALGFGYRCGCLGLLHLEIVQERLQREFDLDLITTAPSVVYRIDMTDGSRLDLHNPADYPDVVRIARIEEPWIRATILVPDEYLGSILSLCTERRGEQIELTYVGSRAMLVYALPLN 451          
BLAST of mRNA_D-mesarthrocarpus_Contig10462.2.1 vs. uniprot
Match: A0A2E3XDN1_9PROT (Elongation factor 4 n=2 Tax=Rhodospirillales TaxID=204441 RepID=A0A2E3XDN1_9PROT)

HSP 1 Score: 681 bits (1758), Expect = 1.230e-241
Identity = 337/451 (74.72%), Postives = 393/451 (87.14%), Query Frame = 1
Query:    1 MTDLSHIRNFAIIAHIDHGKSTLADRLIQECDGLTQREMREQVLDSMDLERERGITIKAHSVRLTYKAQNGETYQLNLMDTPGHVDFGYEVSRSLAAVEGSLLVVDSSQGVEAQTLANAYLAIDAGHEIVPVLNKIDLPAAEPEQVRQQIEDVIGLDASEAIPVSAKSGQGIREVLESVIAKLPAPAGDPAAPLQALLVDSWYDPYLGVVALVRVREGSLKKGQKIRMMATGRAYQVDRVGVHTPARTETGALGPGEIGFITASIKAVADCQVGDTVTDDRVPAETPLPGFKPSVPVVFSSLFPADAAQFEDLREALGKLHLNDASFHYDAESSAALGFGFRCGFLGLLHMEIIQERIEREFDIDLIATAPSVVYKITLNNGSTIDLHNPSDFPDVVKIAEIEEPWIKASIMVPDTYLGAVLTLCTERRGEQVDLTYVAGRAMVVYRLPLN 1353
            MT+L +IRNFAIIAHIDHGKSTLADRLIQ C GL+ REM EQVLDSM+LERERGITIKA +VRL+YKA+NG TY LNLMDTPGHVDF YEVSRSLAA EGSLL+VDSSQGVEAQTLANAYLAIDAGHEIV VLNKIDLPA+EP +VR+QIE+VIGLDAS A+ +SAKSG+GI + LE ++  LP P G+  + LQALLVDSWYD YLGVVAL+R++ G + KGQKIRMMAT ++YQ+DRVG+ TP R E  +L  GEIGFITASI++V DCQVGDT+TDDR P   PL GFKPSVPVVF S+FP+D+AQ+EDLR++L KLHLNDASFH+D ESSAALG G+RCGFLGLLHMEI+Q+R+EREF ++L+ATAPSV+YKI L + +TI LHNPSDFP+V +I EI+EPWIKASI+VPD YLGAVL LCT+RRGEQ+DLTYV  RAM +YRLPLN
Sbjct:    1 MTNLKYIRNFAIIAHIDHGKSTLADRLIQHCGGLSAREMSEQVLDSMELERERGITIKAQTVRLSYKARNGNTYSLNLMDTPGHVDFSYEVSRSLAACEGSLLIVDSSQGVEAQTLANAYLAIDAGHEIVTVLNKIDLPASEPVKVREQIEEVIGLDASNAVEISAKSGKGIEDALEELVLSLPPPEGNSDSSLQALLVDSWYDAYLGVVALLRIKNGRISKGQKIRMMATEKSYQIDRVGIFTPNRVEKDSLETGEIGFITASIRSVIDCQVGDTITDDRDPVAEPLAGFKPSVPVVFCSIFPSDSAQYEDLRDSLSKLHLNDASFHFDPESSAALGLGYRCGFLGLLHMEIVQQRLEREFKLELVATAPSVIYKIHLTDETTIKLHNPSDFPNVTRIKEIDEPWIKASIIVPDEYLGAVLQLCTDRRGEQIDLTYVGARAMAIYRLPLN 451          
BLAST of mRNA_D-mesarthrocarpus_Contig10462.2.1 vs. uniprot
Match: A0A4R6WR62_9PROT (Elongation factor 4 n=1 Tax=Dongia mobilis TaxID=578943 RepID=A0A4R6WR62_9PROT)

HSP 1 Score: 678 bits (1750), Expect = 1.950e-240
Identity = 334/451 (74.06%), Postives = 387/451 (85.81%), Query Frame = 1
Query:    1 MTDLSHIRNFAIIAHIDHGKSTLADRLIQECDGLTQREMREQVLDSMDLERERGITIKAHSVRLTYKAQNGETYQLNLMDTPGHVDFGYEVSRSLAAVEGSLLVVDSSQGVEAQTLANAYLAIDAGHEIVPVLNKIDLPAAEPEQVRQQIEDVIGLDASEAIPVSAKSGQGIREVLESVIAKLPAPAGDPAAPLQALLVDSWYDPYLGVVALVRVREGSLKKGQKIRMMATGRAYQVDRVGVHTPARTETGALGPGEIGFITASIKAVADCQVGDTVTDDRVPAETPLPGFKPSVPVVFSSLFPADAAQFEDLREALGKLHLNDASFHYDAESSAALGFGFRCGFLGLLHMEIIQERIEREFDIDLIATAPSVVYKITLNNGSTIDLHNPSDFPDVVKIAEIEEPWIKASIMVPDTYLGAVLTLCTERRGEQVDLTYVAGRAMVVYRLPLN 1353
            MTDL+HIRNF+I+AHIDHGKSTLADRLIQ C GLT REM EQVLD+M++E+ERGITIKA +VRL YKA NGETYQLNLMDTPGHVDF YEVSR LAA EGSLLVVD+SQGVEAQTLAN Y AID  HEIVPVLNKIDLPAAEP +++QQIEDVIG+DASEA+ +SAK+G  I+ VLE+++ +LPAP GD  APL+A+L+DSWYDPYLGVV L+RV +G +K   + RMMA G  Y++DRVG  TP +T+   LGPGE+GFITA IKAVADC++GDT+TDD+ P    LPGFKPS+PVVF  LFP DAA FE LRE++GKL LNDASFHY+ E+SAALGFGFRCGFLGLLH+EIIQER+EREF++DLI TAPSVVYKI +N+GS I+LHNP+DFPDVVKI  IEEPWIKA+IMVPD YLG+VL LC ERRG Q+DLTY   RAMVVYRLPLN
Sbjct:    1 MTDLAHIRNFSIVAHIDHGKSTLADRLIQYCGGLTDREMTEQVLDNMEIEKERGITIKAQTVRLNYKADNGETYQLNLMDTPGHVDFAYEVSRCLAACEGSLLVVDASQGVEAQTLANVYQAIDHHHEIVPVLNKIDLPAAEPARIKQQIEDVIGIDASEAVEISAKTGLNIKGVLEAIVTRLPAPKGDRNAPLKAMLIDSWYDPYLGVVILLRVIDGVVKVKTQARMMAAGAVYEIDRVGCFTPKQTQVAELGPGEVGFITAGIKAVADCKIGDTITDDKKPCAQALPGFKPSIPVVFCGLFPIDAADFETLRESMGKLRLNDASFHYEMETSAALGFGFRCGFLGLLHLEIIQERLEREFNLDLITTAPSVVYKIHMNDGSMIELHNPADFPDVVKIDRIEEPWIKATIMVPDEYLGSVLKLCQERRGLQIDLTYAGSRAMVVYRLPLN 451          
BLAST of mRNA_D-mesarthrocarpus_Contig10462.2.1 vs. uniprot
Match: A0A521ZZ48_9PROT (Elongation factor 4 n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A521ZZ48_9PROT)

HSP 1 Score: 677 bits (1747), Expect = 5.780e-240
Identity = 332/451 (73.61%), Postives = 393/451 (87.14%), Query Frame = 1
Query:    1 MTDLSHIRNFAIIAHIDHGKSTLADRLIQECDGLTQREMREQVLDSMDLERERGITIKAHSVRLTYKAQNGETYQLNLMDTPGHVDFGYEVSRSLAAVEGSLLVVDSSQGVEAQTLANAYLAIDAGHEIVPVLNKIDLPAAEPEQVRQQIEDVIGLDASEAIPVSAKSGQGIREVLESVIAKLPAPAGDPAAPLQALLVDSWYDPYLGVVALVRVREGSLKKGQKIRMMATGRAYQVDRVGVHTPARTETGALGPGEIGFITASIKAVADCQVGDTVTDDRVPAETPLPGFKPSVPVVFSSLFPADAAQFEDLREALGKLHLNDASFHYDAESSAALGFGFRCGFLGLLHMEIIQERIEREFDIDLIATAPSVVYKITLNNGSTIDLHNPSDFPDVVKIAEIEEPWIKASIMVPDTYLGAVLTLCTERRGEQVDLTYVAGRAMVVYRLPLN 1353
            MTDLSHIRNF+I+AHIDHGKSTLADRLIQ C+GLT REM +QVLDSMD+ERERGITIKA +VRL YKA++G+TYQLNL+DTPGHVDF YEVSRSLAA EGS+LVVD+SQGVEAQTLAN Y AI+A HEIVPVLNKIDLPAAEP++VRQQIEDVIG+DAS+A+  SAK+G GI +VLE+++ +LP P GD  APL+ALLVDSWYD YLGVV LVR+++GS++KG K+++M+    Y V+RVGV TP R E  AL PGE+GF+TA IKAVADC+VGDT+TDD  PA   LPGFKPSVPVVF  LFP DAAQFE LR++L KL LNDASFH+  ESSAALGFGFRCGFLGLLHMEIIQER+EREFD+DLI+TAPSVVY+I   +G+ ++LHNP+D P+V +IA+IEEPW+KA+I+VPD YLG++L LCTERRGEQ+DLTYV  RAM+ YRLPLN
Sbjct:    1 MTDLSHIRNFSIVAHIDHGKSTLADRLIQRCEGLTAREMHDQVLDSMDIERERGITIKAQTVRLAYKAKDGKTYQLNLVDTPGHVDFAYEVSRSLAACEGSILVVDASQGVEAQTLANVYQAIEANHEIVPVLNKIDLPAAEPDRVRQQIEDVIGIDASDAVLCSAKTGIGIDDVLEALVTRLPPPQGDAEAPLKALLVDSWYDAYLGVVILVRIKDGSIRKGTKMKLMSNDTVYPVERVGVFTPKRVEMPALNPGELGFLTAGIKAVADCKVGDTITDDDRPAAEALPGFKPSVPVVFCGLFPVDAAQFEVLRDSLAKLRLNDASFHFQMESSAALGFGFRCGFLGLLHMEIIQERLEREFDLDLISTAPSVVYRIHTTDGNVVELHNPADMPEVTRIAKIEEPWVKATILVPDEYLGSLLALCTERRGEQIDLTYVGNRAMLTYRLPLN 451          
BLAST of mRNA_D-mesarthrocarpus_Contig10462.2.1 vs. uniprot
Match: A0A212KHP7_9PROT (Elongation factor 4 n=1 Tax=uncultured Alphaproteobacteria bacterium TaxID=91750 RepID=A0A212KHP7_9PROT)

HSP 1 Score: 677 bits (1746), Expect = 8.200e-240
Identity = 336/451 (74.50%), Postives = 390/451 (86.47%), Query Frame = 1
Query:    1 MTDLSHIRNFAIIAHIDHGKSTLADRLIQECDGLTQREMREQVLDSMDLERERGITIKAHSVRLTYKAQNGETYQLNLMDTPGHVDFGYEVSRSLAAVEGSLLVVDSSQGVEAQTLANAYLAIDAGHEIVPVLNKIDLPAAEPEQVRQQIEDVIGLDASEAIPVSAKSGQGIREVLESVIAKLPAPAGDPAAPLQALLVDSWYDPYLGVVALVRVREGSLKKGQKIRMMATGRAYQVDRVGVHTPARTETGALGPGEIGFITASIKAVADCQVGDTVTDDRVPAETPLPGFKPSVPVVFSSLFPADAAQFEDLREALGKLHLNDASFHYDAESSAALGFGFRCGFLGLLHMEIIQERIEREFDIDLIATAPSVVYKITLNNGSTIDLHNPSDFPDVVKIAEIEEPWIKASIMVPDTYLGAVLTLCTERRGEQVDLTYVAGRAMVVYRLPLN 1353
            MTDLSHIRNF+IIAHIDHGKSTLADRLIQ C GLT+REM+EQVLDSMD+ERERGITIKA +VRL Y +++G TYQLNLMDTPGHVDF YEVSRSLAA EGSLLVVD+SQGVEAQTLAN Y A++A HEIVPVLNKIDLPAAEP++V+ QIEDVIGLDAS+A+ +SAK+G GI +VLE+++ +LPAP G+  APL+ALLVDSWYD YLGVV LVRV++G LKKG +IRMMA G AYQ+D+VG  TP   +  +LGPGE+GF+ A IK VADC+VGDT+TDDR PA+  LPGFKPSVPVVFSSLFP D+  FE+LRE+LGKL LNDASF Y+ ESSAALGFGFRCG+LGLLHMEIIQER+EREFD+DLI TAPSVVY++ + +G+  +LHNP D P+  KI EIEEPW+KA+IMVPD YLGAVL LCTERRG Q +LTYV  RAM VYRLPLN
Sbjct:    1 MTDLSHIRNFSIIAHIDHGKSTLADRLIQVCGGLTEREMKEQVLDSMDIERERGITIKAQTVRLAYTSKDGRTYQLNLMDTPGHVDFAYEVSRSLAACEGSLLVVDASQGVEAQTLANVYHAMEANHEIVPVLNKIDLPAAEPDRVKGQIEDVIGLDASDAVMISAKTGLGISDVLEALVTRLPAPTGEADAPLKALLVDSWYDSYLGVVILVRVKDGVLKKGMRIRMMANGAAYQLDKVGAFTPKMVDVESLGPGEMGFLIAGIKTVADCKVGDTITDDRAPADHALPGFKPSVPVVFSSLFPVDSGDFENLRESLGKLRLNDASFQYEPESSAALGFGFRCGYLGLLHMEIIQERLEREFDLDLITTAPSVVYRVHMTDGNVRELHNPVDMPEPTKIEEIEEPWVKATIMVPDEYLGAVLQLCTERRGIQDELTYVGNRAMAVYRLPLN 451          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10462.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A848W338_9PROT1.750e-26080.71Elongation factor 4 n=1 Tax=Alphaproteobacteria ba... [more]
A0A2E7PMD3_9PROT4.920e-25378.94Elongation factor 4 n=5 Tax=Alphaproteobacteria Ta... [more]
A0A2S6QLW5_9PROT2.680e-25077.61Elongation factor 4 n=1 Tax=Alphaproteobacteria ba... [more]
A0A2N3PQR6_9PROT5.280e-24374.72Elongation factor 4 n=5 Tax=root TaxID=1 RepID=A0A... [more]
K2ELA8_9BACT2.140e-24275.39Elongation factor 4 n=3 Tax=Bacteria TaxID=2 RepID... [more]
A0A6A7KJ86_9PROT6.120e-24273.84Elongation factor 4 n=1 Tax=Alphaproteobacteria ba... [more]
A0A2E3XDN1_9PROT1.230e-24174.72Elongation factor 4 n=2 Tax=Rhodospirillales TaxID... [more]
A0A4R6WR62_9PROT1.950e-24074.06Elongation factor 4 n=1 Tax=Dongia mobilis TaxID=5... [more]
A0A521ZZ48_9PROT5.780e-24073.61Elongation factor 4 n=1 Tax=Rhodospirillaceae bact... [more]
A0A212KHP7_9PROT8.200e-24074.50Elongation factor 4 n=1 Tax=uncultured Alphaproteo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10462contigD-mesarthrocarpus_Contig10462:2950..4302 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog244581.IM40_05000
Preferred namelepA
PFAMsEFG_C,EFG_II,GTP_EFTU,GTP_EFTU_D2,LepA_C
Model size1353
Max annot lvl766|Rickettsiales
KEGG koko:K03596
KEGG Pathwayko05134,map05134
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.77e-242
EggNOG OGsCOG0481@1|root,COG0481@2|Bacteria,1MVZA@1224|Proteobacteria,2TR3H@28211|Alphaproteobacteria,47EUT@766|Rickettsiales
DescriptionRequired for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
Cds size1353
COG categoryJ
BRITEko00000,ko00001
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789184.0923088-CDS-D-mesarthrocarpus_Contig10462:2949..43021680789184.0923088-CDS-D-mesarthrocarpus_Contig10462:2949..4302Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10462 2950..4302 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10462.2.1prot_D-mesarthrocarpus_Contig10462.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10462 2950..4302 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10462.2.1

>prot_D-mesarthrocarpus_Contig10462.2.1 ID=prot_D-mesarthrocarpus_Contig10462.2.1|Name=mRNA_D-mesarthrocarpus_Contig10462.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=451bp
MTDLSHIRNFAIIAHIDHGKSTLADRLIQECDGLTQREMREQVLDSMDLE
RERGITIKAHSVRLTYKAQNGETYQLNLMDTPGHVDFGYEVSRSLAAVEG
SLLVVDSSQGVEAQTLANAYLAIDAGHEIVPVLNKIDLPAAEPEQVRQQI
EDVIGLDASEAIPVSAKSGQGIREVLESVIAKLPAPAGDPAAPLQALLVD
SWYDPYLGVVALVRVREGSLKKGQKIRMMATGRAYQVDRVGVHTPARTET
GALGPGEIGFITASIKAVADCQVGDTVTDDRVPAETPLPGFKPSVPVVFS
SLFPADAAQFEDLREALGKLHLNDASFHYDAESSAALGFGFRCGFLGLLH
MEIIQERIEREFDIDLIATAPSVVYKITLNNGSTIDLHNPSDFPDVVKIA
EIEEPWIKASIMVPDTYLGAVLTLCTERRGEQVDLTYVAGRAMVVYRLPL
N
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mRNA from alignment at D-mesarthrocarpus_Contig10462:2950..4302+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10462.2.1 ID=mRNA_D-mesarthrocarpus_Contig10462.2.1|Name=mRNA_D-mesarthrocarpus_Contig10462.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1353bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10462:2950..4302+ (Discosporangium mesarthrocarpum MT17_79)
ATGACCGACCTGTCGCATATCCGCAATTTCGCGATCATCGCCCATATCGA TCATGGCAAGTCGACGCTCGCCGACCGGCTGATCCAGGAATGCGATGGCC TGACCCAGCGCGAAATGCGCGAGCAGGTGCTCGATTCGATGGACCTCGAG CGCGAGCGCGGCATCACCATCAAGGCGCATTCGGTGCGGCTTACCTACAA GGCGCAGAATGGCGAGACCTATCAGCTCAACCTGATGGATACGCCCGGGC ATGTCGATTTCGGCTATGAGGTGTCGCGGTCGCTGGCCGCCGTCGAGGGC TCGCTGCTGGTCGTCGATTCGAGCCAGGGGGTCGAGGCGCAGACCCTCGC CAACGCCTATCTGGCGATCGATGCCGGCCACGAGATCGTGCCGGTGCTCA ACAAGATCGATCTGCCGGCGGCCGAGCCGGAACAGGTGCGCCAGCAGATC GAGGATGTGATCGGTCTCGATGCGTCGGAGGCGATACCGGTTTCGGCGAA GTCGGGGCAGGGCATTCGCGAGGTGCTCGAATCGGTCATCGCCAAGCTGC CGGCGCCGGCAGGCGATCCGGCGGCGCCGTTGCAGGCGCTGCTCGTCGAT AGCTGGTACGACCCGTATCTTGGTGTTGTCGCGCTCGTACGCGTACGCGA GGGCTCGCTGAAGAAGGGCCAGAAGATTCGCATGATGGCGACCGGCCGGG CCTATCAGGTCGACCGGGTCGGCGTGCACACGCCGGCGCGCACCGAGACC GGCGCCCTGGGGCCAGGCGAAATCGGTTTCATTACGGCGTCGATCAAGGC CGTCGCCGACTGTCAGGTCGGCGACACGGTGACCGACGACCGGGTGCCGG CGGAAACGCCGCTGCCCGGCTTCAAGCCGTCTGTGCCGGTGGTCTTCTCG TCGCTGTTCCCCGCCGATGCGGCGCAGTTCGAGGATTTGCGCGAAGCACT CGGCAAGCTGCACCTCAACGATGCCAGTTTCCATTACGACGCCGAATCCT CGGCGGCCCTCGGCTTCGGCTTCCGCTGCGGCTTTCTCGGCCTGCTGCAT ATGGAGATCATCCAGGAACGCATCGAGCGCGAGTTCGATATCGACCTGAT CGCGACGGCGCCCTCGGTCGTCTACAAGATCACGCTGAACAACGGCTCGA CGATCGATCTGCACAACCCGTCCGATTTCCCCGATGTCGTGAAGATCGCC GAGATCGAGGAGCCTTGGATCAAGGCCTCGATCATGGTGCCGGACACCTA TCTTGGCGCGGTGCTGACGCTGTGCACCGAGCGGCGCGGCGAGCAGGTCG ACCTGACCTATGTCGCCGGGCGCGCCATGGTCGTCTACAGACTGCCGCTC AAC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10462:2950..4302+

>mRNA_D-mesarthrocarpus_Contig10462.2.1 ID=mRNA_D-mesarthrocarpus_Contig10462.2.1|Name=mRNA_D-mesarthrocarpus_Contig10462.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1353bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10462:2950..4302+ (Discosporangium mesarthrocarpum MT17_79)
ATGACCGACCTGTCGCATATCCGCAATTTCGCGATCATCGCCCATATCGA
TCATGGCAAGTCGACGCTCGCCGACCGGCTGATCCAGGAATGCGATGGCC
TGACCCAGCGCGAAATGCGCGAGCAGGTGCTCGATTCGATGGACCTCGAG
CGCGAGCGCGGCATCACCATCAAGGCGCATTCGGTGCGGCTTACCTACAA
GGCGCAGAATGGCGAGACCTATCAGCTCAACCTGATGGATACGCCCGGGC
ATGTCGATTTCGGCTATGAGGTGTCGCGGTCGCTGGCCGCCGTCGAGGGC
TCGCTGCTGGTCGTCGATTCGAGCCAGGGGGTCGAGGCGCAGACCCTCGC
CAACGCCTATCTGGCGATCGATGCCGGCCACGAGATCGTGCCGGTGCTCA
ACAAGATCGATCTGCCGGCGGCCGAGCCGGAACAGGTGCGCCAGCAGATC
GAGGATGTGATCGGTCTCGATGCGTCGGAGGCGATACCGGTTTCGGCGAA
GTCGGGGCAGGGCATTCGCGAGGTGCTCGAATCGGTCATCGCCAAGCTGC
CGGCGCCGGCAGGCGATCCGGCGGCGCCGTTGCAGGCGCTGCTCGTCGAT
AGCTGGTACGACCCGTATCTTGGTGTTGTCGCGCTCGTACGCGTACGCGA
GGGCTCGCTGAAGAAGGGCCAGAAGATTCGCATGATGGCGACCGGCCGGG
CCTATCAGGTCGACCGGGTCGGCGTGCACACGCCGGCGCGCACCGAGACC
GGCGCCCTGGGGCCAGGCGAAATCGGTTTCATTACGGCGTCGATCAAGGC
CGTCGCCGACTGTCAGGTCGGCGACACGGTGACCGACGACCGGGTGCCGG
CGGAAACGCCGCTGCCCGGCTTCAAGCCGTCTGTGCCGGTGGTCTTCTCG
TCGCTGTTCCCCGCCGATGCGGCGCAGTTCGAGGATTTGCGCGAAGCACT
CGGCAAGCTGCACCTCAACGATGCCAGTTTCCATTACGACGCCGAATCCT
CGGCGGCCCTCGGCTTCGGCTTCCGCTGCGGCTTTCTCGGCCTGCTGCAT
ATGGAGATCATCCAGGAACGCATCGAGCGCGAGTTCGATATCGACCTGAT
CGCGACGGCGCCCTCGGTCGTCTACAAGATCACGCTGAACAACGGCTCGA
CGATCGATCTGCACAACCCGTCCGATTTCCCCGATGTCGTGAAGATCGCC
GAGATCGAGGAGCCTTGGATCAAGGCCTCGATCATGGTGCCGGACACCTA
TCTTGGCGCGGTGCTGACGCTGTGCACCGAGCGGCGCGGCGAGCAGGTCG
ACCTGACCTATGTCGCCGGGCGCGCCATGGTCGTCTACAGACTGCCGCTC
AAC
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