mRNA_D-mesarthrocarpus_Contig1046.8.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1046.8.1 vs. uniprot
Match: A0A6H5K3F2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3F2_9PHAE) HSP 1 Score: 104 bits (259), Expect = 7.890e-22 Identity = 51/110 (46.36%), Postives = 70/110 (63.64%), Query Frame = 2
Query: 545 RSRQGIMDRCVGAVDGLFIRIHKPRVKECPTPARICSGHTKGFGFNLQEICDACYISTAGCISCPGSTNDGTIWNTSEVKSKVKMLLLPDGYYIIGDSAYPPSDRLLTPY 874
RS G++ CVGA+DGLF+R+ +P ++ P SGH KGFG N Q +C+A Y A ++CPGS ND T + S + +K L P G YI+GD+AYP SD++L PY
Sbjct: 171 RSTNGVIRMCVGAMDGLFVRMTQPSLRRHVNPRSFYSGHKKGFGMNFQGVCNARYEIIAWTMNCPGSCNDRTAFKHSVFGTVLKTL--PPGAYIVGDAAYPASDQVLVPY 278
BLAST of mRNA_D-mesarthrocarpus_Contig1046.8.1 vs. uniprot
Match: A0A6H5L6B6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6B6_9PHAE) HSP 1 Score: 101 bits (252), Expect = 7.210e-21 Identity = 50/111 (45.05%), Postives = 71/111 (63.96%), Query Frame = 2
Query: 545 RSRQGIMDRCVGAVDGLFIRIHKPRVKECPTPARICSGHTKGFGFNLQEICDACYISTAGCISCPGSTNDGTIWNTSEVKSKVKMLL-LPDGYYIIGDSAYPPSDRLLTPY 874
RS ++ +CVGA DGLF+R+ KP KE P +GH KGFG N Q +CDA Y A ++CPGS ND T +N S K+L LP+G++++GD+AY S+R++ P+
Sbjct: 164 RSSMDVVRKCVGATDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQAVCDAQYRIMAWMMNCPGSQNDRTAFNFSGFD---KLLAGLPEGHFVVGDAAYGASERVVVPF 271
BLAST of mRNA_D-mesarthrocarpus_Contig1046.8.1 vs. uniprot
Match: A0A6H5KNF2_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNF2_9PHAE) HSP 1 Score: 97.4 bits (241), Expect = 3.090e-20 Identity = 47/106 (44.34%), Postives = 69/106 (65.09%), Query Frame = 2
Query: 560 IMDRCVGAVDGLFIRIHKPRVKECPTPARICSGHTKGFGFNLQEICDACYISTAGCISCPGSTNDGTIWNTSEVKSKVKMLL-LPDGYYIIGDSAYPPSDRLLTPY 874
++ +CVGA+DGLF+R+ KP KE P +GH GFG N Q +CDA Y A +SCPGS ND T +N + K+L LP+G++++GD+AY S+R++ P+
Sbjct: 17 VVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKNGFGMNFQAVCDAQYRIVAWTMSCPGSQNDRTAFNFAWFD---KLLAGLPEGHFVVGDAAYGASERVVVPF 119
BLAST of mRNA_D-mesarthrocarpus_Contig1046.8.1 vs. uniprot
Match: A0A6H5KEZ6_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEZ6_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 1.070e-18 Identity = 54/124 (43.55%), Postives = 69/124 (55.65%), Query Frame = 2
Query: 506 DDRLDHVAAESIARSRQGIMDRCVGAVDGLFIRIHKPRVKECPTPARICSGHTKGFGFNLQEICDACY-ISTAGCISCPGSTNDGTIWNTSEVKSKVKMLLLPDGYYIIGDSAYPPSDRLLTPY 874
+D AAE +S G V A DGLF++ P P SG G+G N+Q CDA Y + CI+ PGSTND T WN S++ + VK L P G+Y++GD+AYP SD LLTPY
Sbjct: 186 EDECTRQAAEWEEKSTGGAFQGVVAAGDGLFVKTLAPTALNTPNVLSYYSGSKCGYGVNVQATCDANYRFCSMSCIA-PGSTNDWTAWNHSDLSTAVKNL--PPGFYMLGDAAYPLSDHLLTPY 306
BLAST of mRNA_D-mesarthrocarpus_Contig1046.8.1 vs. uniprot
Match: A0A6H5K6M2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M2_9PHAE) HSP 1 Score: 94.7 bits (234), Expect = 2.210e-18 Identity = 47/109 (43.12%), Postives = 65/109 (59.63%), Query Frame = 2
Query: 545 RSRQGIMDRCVGAVDGLFIRIHKPRVKECPTPARICSGHTKGFGFNLQEICDACYISTAGCISCPGSTNDGTIWNTSEVKSKVKMLLLPDGYYIIGDSAYPPSDRLLTP 871
RS G++ RCVGA+DGLF+R+ P +K P SGH K FG N Q IC+A Y ++CPGS ND T + S + + + P +I+GD+AYP S+R+L P
Sbjct: 175 RSTNGVIRRCVGAMDGLFVRLIPPCLKRHAVPGSFYSGHKKAFGMNFQGICNASYEIITWTMNCPGSQNDRTAFKHSGFDALLSKM--PPDCFIVGDAAYPASNRVLVP 281
BLAST of mRNA_D-mesarthrocarpus_Contig1046.8.1 vs. uniprot
Match: A0A6H5JV75_9PHAE (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV75_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 3.580e-18 Identity = 54/124 (43.55%), Postives = 69/124 (55.65%), Query Frame = 2
Query: 506 DDRLDHVAAESIARSRQGIMDRCVGAVDGLFIRIHKPRVKECPTPARICSGHTKGFGFNLQEICDACY-ISTAGCISCPGSTNDGTIWNTSEVKSKVKMLLLPDGYYIIGDSAYPPSDRLLTPY 874
+D AAE +S G V A DGLF++ P P SG G+G N+Q CDA Y + CI+ PGSTND T WN S++ + VK L P G+Y++GD+AYP SD LLTPY
Sbjct: 186 EDECTRQAAEWEEKSTGGAFQGVVAAGDGLFVKTLAPTALNTPNVLSYYSGSKCGYGVNVQATCDANYRFCSMSCIA-PGSTNDWTAWNHSDLSTAVKNL--PPGFYMLGDAAYPLSDHLLTPY 306
BLAST of mRNA_D-mesarthrocarpus_Contig1046.8.1 vs. uniprot
Match: A0A6H5KPH6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPH6_9PHAE) HSP 1 Score: 91.3 bits (225), Expect = 3.930e-17 Identity = 53/124 (42.74%), Postives = 68/124 (54.84%), Query Frame = 2
Query: 506 DDRLDHVAAESIARSRQGIMDRCVGAVDGLFIRIHKPRVKECPTPARICSGHTKGFGFNLQEICDACY-ISTAGCISCPGSTNDGTIWNTSEVKSKVKMLLLPDGYYIIGDSAYPPSDRLLTPY 874
+D AAE +S G V A DGLF++ P P SG G+G N+Q CDA Y + CI+ PGSTND T WN S++ + VK L P G+Y++GD+A P SD LLTPY
Sbjct: 151 EDECTRQAAEWEEKSTGGAFQGVVAAGDGLFVKTLAPTALNTPNVLSYYSGSKCGYGVNVQATCDANYRFCSMSCIA-PGSTNDWTAWNHSDLSTAVKNL--PPGFYMLGDAAQPLSDHLLTPY 271
BLAST of mRNA_D-mesarthrocarpus_Contig1046.8.1 vs. uniprot
Match: G4ZVV4_PHYSP (DDE Tnp4 domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZVV4_PHYSP) HSP 1 Score: 73.2 bits (178), Expect = 1.310e-11 Identity = 42/121 (34.71%), Postives = 62/121 (51.24%), Query Frame = 2
Query: 515 LDHVAAESIARSRQGIMDRCVGAVDGLFIRIHKPRVKECPTPARIC-SGHTKGFGFNLQEICDACYISTAGCISCPGSTNDGTIWNTSEVKSKVKMLLLPDGYYIIGDSAYPPSDRLLTPY 874
++ AAE S +G++D CVG VDG+ +RI P K+ R SGH G N+Q CD ++ PG ++D +W + K + L + Y IGD AY PS+ +LTP+
Sbjct: 93 IECAAAEFAKSSSEGVLDGCVGCVDGMLVRIITPTRKQAGGNVRAYFSGHYHHMGLNIQAACDHQCRFIYFAVAAPGGSSD--LWAFARTKLATYVGNLGNNRYFIGDGAYMPSEHMLTPF 211
BLAST of mRNA_D-mesarthrocarpus_Contig1046.8.1 vs. uniprot
Match: A0A6H5JJA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJA1_9PHAE) HSP 1 Score: 70.9 bits (172), Expect = 3.240e-10 Identity = 40/106 (37.74%), Postives = 61/106 (57.55%), Query Frame = 2
Query: 560 IMDRCVGAVDGLFIRIHKPRVKECPTPARICSGHTKGFGFNLQEICDACYISTAGCISCPGSTNDGTIWNTSEVKSKVKMLL-LPDGYYIIGDSAYPPSDRLLTPY 874
++ +CVGA+DGLF+R+ KP KE P +GH KGFG N Q +C S ND T +N S K+L LP+G++++G++AY S+R++ P+
Sbjct: 180 VVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQ-VC---------------SQNDRTAFNFSGFD---KLLAGLPEGHFVVGNAAYGASERVVVPF 266
BLAST of mRNA_D-mesarthrocarpus_Contig1046.8.1 vs. uniprot
Match: A0A6H5KLK3_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLK3_9PHAE) HSP 1 Score: 67.8 bits (164), Expect = 7.180e-10 Identity = 35/66 (53.03%), Postives = 46/66 (69.70%), Query Frame = 2
Query: 680 NLQEICDACY-ISTAGCISCPGSTNDGTIWNTSEVKSKVKMLLLPDGYYIIGDSAYPPSDRLLTPY 874
N+Q CDA Y + CI+ PGSTND T WN S++ + V+ L P G+Y++GD+AYP SD LLTPY
Sbjct: 2 NVQATCDANYRFCSMSCIA-PGSTNDWTAWNHSDLSTAVQNL--PPGFYMLGDAAYPLSDHLLTPY 64 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1046.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1046.8.1 >prot_D-mesarthrocarpus_Contig1046.8.1 ID=prot_D-mesarthrocarpus_Contig1046.8.1|Name=mRNA_D-mesarthrocarpus_Contig1046.8.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=133bp MPWSCHRMAVDDRLDHVAAESIARSRQGIMDRCVGAVDGLFIRIHKPRVKback to top mRNA from alignment at D-mesarthrocarpus_Contig1046:21282..22290+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig1046.8.1 ID=mRNA_D-mesarthrocarpus_Contig1046.8.1|Name=mRNA_D-mesarthrocarpus_Contig1046.8.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1009bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1046:21282..22290+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1046:21282..22290+ >mRNA_D-mesarthrocarpus_Contig1046.8.1 ID=mRNA_D-mesarthrocarpus_Contig1046.8.1|Name=mRNA_D-mesarthrocarpus_Contig1046.8.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=399bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1046:21282..22290+ (Discosporangium mesarthrocarpum MT17_79)back to top |