mRNA_D-mesarthrocarpus_Contig10447.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10447.1.1 vs. uniprot
Match: A0A5C5YWA7_9BACT (Putative Ig domain protein n=1 Tax=Planctomycetes bacterium CA13 TaxID=2527986 RepID=A0A5C5YWA7_9BACT) HSP 1 Score: 127 bits (319), Expect = 3.570e-26 Identity = 135/452 (29.87%), Postives = 220/452 (48.67%), Query Frame = 1
Query: 1 EGLKVTVDTTNVAENGGVATVTVTRGQFSVNAAETLAVKVGDSSELSGPDSVTFVAGQRSVSFELHGVDDEILDGTQSVTVSVESEGRTRG-SLNVDVTDHEELSLSVVNVEVPENAGDFQLTLRRGDVDDLSSPVSVELSVPEELRDRIELPSEVVIAAGDESTVITVGVNDNDVVDGNHAISITASAAGFVSATAKKPVDVVPNAAPTIASIDDQALEEGESTSVTIEIADADTPLSELSITATSGDASVLSVALAIPEGSG----AAELHLTRLAVSGPTLVTVTAGDGTN-----ETSTTFEVATLIVDRVLPTISSIDNQELTVGETTLLPLSVADEDTPLSEVSVTATSDDDSVLPEGSISVEGTGAERTLSLSPAKSGGPVSVT--VTVNDGVHTATKTFNVTVTAIEQVTPGLAR--HYTFNGGDTSDHSGRQQDAEVHGATLT 1314
E L +TVD +++ENG AT T++RGQ ++N ++++ D +E + P +VT A S +F + VDD +LDGT++VT++ + G T S++V+VTD+E LSL++ + V E G T+RR ++D L++ + V L L +P+ V I G T+ D++V DG ++ ITA+A G++ ++ +DV+ NAAP + I DQ ++E S+ I D D P GDA + S+ P G+ E T GP VT N + + TF + T+ P + I N+ + L + D D P +S + +D+ +P G+ TG S P+++ GP T V V+DG T ++T VTV + V P L + + T + G + DA++ G +T
Sbjct: 1821 ESLSMTVDINSLSENGAFATATISRGQTNLNELISVSLVSSDLTEATVPTTVTIPANAPSATFLISSVDDVVLDGTKTVTITGTATGFTESTSVDVNVTDYETLSLTIDDEAVHEADGVATGTVRRMNID-LANELVVSLD--SNLVSEATVPTTVTIPVGRSQATFTIRGVDDEVRDGTKSVVITATAGGYIDSS--DSIDVLGNAAPVLDEIPDQTIDEESLLSLFITATDIDLP----------GDALLFSLDPGAPTGAAINADTGEFTWTPTETQGPGEFDVTVRVTDNGVLELDAAATFTI-TVNEHGKPPVLEPIGNRSVDERTRLLFTAAATDGDIPAGTLSYSLAADESGDVPAGATMDPNTGV---FSWIPSEAQGPGVFTFDVVVSDGELTDSETIVVTVGEVN-VAPSLDQIGNQTVDEGTLLAFTATTTDADLPGNAMT 2252
BLAST of mRNA_D-mesarthrocarpus_Contig10447.1.1 vs. uniprot
Match: A0A356A9M7_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A356A9M7_9PLAN) HSP 1 Score: 107 bits (268), Expect = 4.040e-23 Identity = 56/149 (37.58%), Postives = 91/149 (61.07%), Query Frame = 1
Query: 1888 TRIEFG--EVRFGVPAQDRATGDAYIMYTEQHVHERWTEDAPNDIGTRAEHLMIVRFNEQASQWEYDTNHKWVSFESRDTDVLLAAIDFDNDEVSVLQGVDSTTHGMKTGVTETDLVVTPNTYNGKSNAGEFGLQGSFAIVKKHSSQQT 2328
TR++ + +G+P QD ATG+ +I+Y++Q V +R+ A + AEH ++VR+ ++QW+Y N WV F D L+AAIDFD+ +V +LQG T +G+ G E DL +T N + + NAGEFG+ G++ +++ + Q T
Sbjct: 46 TRVDISPSSLGYGIPGQDNATGNGFILYSQQIVQQRF---AGAVVANGAEHFVVVRY--LSNQWQYAHNDVWVDFTPTTGDRLIAAIDFDSSQVQMLQGSSGTVNGIAQGYVEGDLTITANQWRDRPNAGEFGITGTYFTLEQITPQTT 189
BLAST of mRNA_D-mesarthrocarpus_Contig10447.1.1 vs. uniprot
Match: A0A2E9VRZ0_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Rubinisphaera sp. TaxID=2024857 RepID=A0A2E9VRZ0_9PLAN) HSP 1 Score: 110 bits (274), Expect = 3.190e-22 Identity = 56/148 (37.84%), Postives = 90/148 (60.81%), Query Frame = 1
Query: 1885 KTRIEFGEVRFGVPAQDRATGDAYIMYTEQHVHERWTEDAPNDIGTRAEHLMIVRFNEQASQWEYDTNHKWVSFESRDTDVLLAAIDFDNDEVSVLQGVDSTTHGMKTGVTETDLVVTPNTYNGKSNAGEFGLQGSFAIVKKHSSQQT 2328
+ I + +G+P+QD ATG+ +I+Y++Q V +R+ A + AEH ++VR+ ++QW+Y N WV F D L+AAIDFD+ +V +LQG + +G+ G E+DL +TPN + + NAGEFG+ G++ V + Q T
Sbjct: 100 RINIAPSSLGYGIPSQDNATGNGFILYSQQSVQQRF---AGAVVANGAEHFVVVRY--LSNQWQYAHNDIWVDFTPTTGDRLIAAIDFDSSQVQMLQGSSGSVNGIAQGYVESDLTITPNQWRDRPNAGEFGITGTYFTVLETPPQTT 242
BLAST of mRNA_D-mesarthrocarpus_Contig10447.1.1 vs. uniprot
Match: A0A177R9N0_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobiaceae bacterium SCGC AG-212-N21 TaxID=1799659 RepID=A0A177R9N0_9BACT) HSP 1 Score: 113 bits (282), Expect = 7.400e-22 Identity = 137/459 (29.85%), Postives = 210/459 (45.75%), Query Frame = 1
Query: 499 TVGVNDNDVVDGNHAISITASAAGFVSATAKKPVDVVP----NAAPTIASIDDQALEEGESTS-VTIEIADADTPLSELSITATSGDASVLSVALAIPEGSGAAE-LHLTRLA-VSGPTLVTVTAGDGTNETSTTFEVATLIVDRVLPTISSIDNQELTVGE-TTLLPLSVADEDTPLSEVSVTATSDDDSVLPEGSISVEGTGAERTLSLSPAKSG-GPVSVTVTVNDGVHTATKTFNVTVTAIEQVTPGLARHYTFNGGD---TSDHSGRQQDAE-VHGATLTEDRFGNADSAYLFDGVDDFISASNES-LPAENDSRTIAVWARFDSAPVSSVLAAYGSNSNGQQSGLR--VVQGKWQGSFWGFASD--LNTGKSAPQGEWVHVALTYDAASKTATFYENGIKVKEKTNLTPNTVLSPNGLTLGKLPQSQGSTSFYFHGALDDVRVYDTALTAVDI 1821
TV V N G I++T S G +S + V P N PTIA + Q + E T V + DA+T + L+++ + + +++ V GSG++ + +T +A SG +TVT DG T T F V T+ PT+++I +Q T +P +V D +T +SV +S +++ G IS G+GA RT+ + P G ++TVTV+DG +AT FN+TV GL Y F+ G D SG V G T R+G S DGVDD + + S + T++VW R +++ + + N N +G + Q +F FA+ +TG G+W HVA+T+ A T TFY +G+ P + NG L KL + GALD++R+Y AL+ +I
Sbjct: 364 TVMVTPNPGQAGTTTITVTVSD-GALSTDTSFVLTVTPAAPVNTPPTIAGLGPQTINEDTVTGPVGFTVGDAETAAASLTVSGGTSNPALVPVGNISFGGSGSSRTVSVTPVANQSGSATITVTVSDGQLTTPTNF-VLTVNAVNDAPTVTAIASQTAVKNTPTAAIPFTVGDVETAAGSLSVGGSSSSQTLVGVGGISFGGSGANRTVMVMPNPGQTGTATITVTVSDGALSATSVFNLTV---NDTPSGLVTGYDFDAGSGAVVEDVSGGGHVGTLVDGPVWTAGRYGGGVS---LDGVDDHVLVAGPSTINLGTSDFTLSVWLRREASGSEHTILSKTDNMNWTTAGKEWFINGSSSQVAFGVFAAGEVYSTGTIENDGQWHHVAVTFQDAPNTVTFYIDGVASGGGVLDLP----ADNGGHLIKL--GGHPAGHHMRGALDEMRIYSRALSTAEI 808
BLAST of mRNA_D-mesarthrocarpus_Contig10447.1.1 vs. uniprot
Match: A0A3D4P8F8_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3D4P8F8_9PLAN) HSP 1 Score: 101 bits (252), Expect = 1.050e-21 Identity = 51/127 (40.16%), Postives = 79/127 (62.20%), Query Frame = 1
Query: 1915 FGVPAQDRATGDAYIMYTEQHVHERWTEDAPNDIGTRAEHLMIVRFNEQASQWEYDTNHKWVSFESRDTDVLLAAIDFDNDEVSVLQGVDSTTHGMKTGVTETDLVVTPNTYNGKSNAGEFGLQGSF 2295
+G+P QD ATG+ +IMY++Q V +R+ A + AEH ++VR+ ++QW+Y N WV F D L+AAIDF + +V +LQG + +G+ G E+DLV+T N + N GEFG+ G++
Sbjct: 5 YGIPGQDNATGNGFIMYSQQSVQQRF---AGAVVANGAEHFVVVRY--LSNQWQYANNDVWVDFTPTTGDRLIAAIDFGSSQVQMLQGSSGSVNGINQGYLESDLVITANQWRDVFNEGEFGITGTY 126
BLAST of mRNA_D-mesarthrocarpus_Contig10447.1.1 vs. uniprot
Match: A0A5C5XAT9_9PLAN (Uncharacterized protein n=1 Tax=Rubinisphaera italica TaxID=2527969 RepID=A0A5C5XAT9_9PLAN) HSP 1 Score: 107 bits (266), Expect = 3.490e-21 Identity = 70/186 (37.63%), Postives = 104/186 (55.91%), Query Frame = 1
Query: 1756 FYFHGALD-DVRVYDTA--LTAVDIAAIRDAQPTESNTDAPQIDASKTRIEFGEVRFGVPAQDRATGDAYIMYTEQHVHERWTEDAPNDIGTRAEHLMIVRFNEQASQWEYDTNHKWVSFESRDTDVLLAAIDFDNDEVSVLQGVDSTTHGMKTGVTETDLVVTPNTYNGKSNAGEFGLQGSFAIV 2304
F + ALD V+V DTA +T D A++ T S TDA + +++ I + +G+P QD A G+ YI+Y+ V R+ + I AEH + VRF +QW+Y N WV+F D L+A IDF + +V +LQG T +G+ G E+DLV+TPN + NAGEFG+ G++ +
Sbjct: 205 FETNPALDVRVQVDDTAVGMTPDDTASL-----TISLTDA--VPSTRVDISPSSLGYGIPGQDNAKGEGYILYSYLSVQTRFAGEV---IANGAEHFLAVRFIN--NQWQYAHNDVWVNFTPITGDRLIATIDFSSSQVQMLQGSSGTLNGIDQGYVESDLVITPNQWRNTYNAGEFGITGTYFTI 378
BLAST of mRNA_D-mesarthrocarpus_Contig10447.1.1 vs. uniprot
Match: A0A356A9G0_9PLAN (Cadherin domain-containing protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A356A9G0_9PLAN) HSP 1 Score: 110 bits (276), Expect = 4.300e-21 Identity = 70/189 (37.04%), Postives = 106/189 (56.08%), Query Frame = 1
Query: 1756 FYFHGALD-DVRVYDTALTAV-DIAAIRDAQPTESNTDAPQIDASKTRIEF--GEVRFGVPAQDRATGDAYIMYTEQHVHERWTEDAPNDIGTRAEHLMIVRFNEQASQWEYDTNHKWVSFESRDTDVLLAAIDFDNDEVSVLQGVDSTTHGMKTGVTETDLVVTPNTYNGKSNAGEFGLQGSFAIVKK 2310
F + ALD V V DT L + D A+ T+ N + P TRI+ + +G+P QD ATG+ +I+Y++Q V +R+ A I AEH + VR+ SQW+Y N WV F D L+AAI+FD+ +V +L G + +G+ G E+DL +TPN + + NAGEFG+ G++ V++
Sbjct: 1576 FESNPALDVTVEVDDTTLGSTPDDTALLTISVTDVNENGPT-----TRIDITPSSLGYGIPGQDNATGNGFILYSQQSVQQRF---AGAIIANGAEHFVAVRYIN--SQWQYAHNDVWVDFTPTTGDRLIAAINFDSSQVQMLLGSSGSVNGINQGYVESDLTITPNQWRDRPNAGEFGISGTYFTVEQ 1754
BLAST of mRNA_D-mesarthrocarpus_Contig10447.1.1 vs. uniprot
Match: A0A356ACN3_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A356ACN3_9PLAN) HSP 1 Score: 108 bits (270), Expect = 1.750e-20 Identity = 56/142 (39.44%), Postives = 88/142 (61.97%), Query Frame = 1
Query: 1888 TRIEFG--EVRFGVPAQDRATGDAYIMYTEQHVHERWTEDAPNDIGTRAEHLMIVRFNEQASQWEYDTNHKWVSFESRDTDVLLAAIDFDNDEVSVLQGVDSTTHGMKTGVTETDLVVTPNTYNGKSNAGEFGLQGSFAIVK 2307
TRI+ + +G+P QD ATG +I+Y++Q V +R+ A + AEH ++VR+ +QW+Y N WV F D L+AAI+FD+ +V +LQG + +G+ G E+DL +TPN + +SNAGEFG+ G++ V+
Sbjct: 733 TRIDIAPSSLGYGIPGQDNATGAGFILYSQQSVQQRF---AGAIVANGAEHFVVVRYLN--NQWQYANNDVWVDFTPTAGDRLVAAIEFDSSQVEMLQGNTGSVNGINQGYVESDLTITPNQWRDRSNAGEFGITGTYFTVE 869
BLAST of mRNA_D-mesarthrocarpus_Contig10447.1.1 vs. uniprot
Match: A0A2V5VVT1_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V5VVT1_9BACT) HSP 1 Score: 106 bits (264), Expect = 4.510e-20 Identity = 124/422 (29.38%), Postives = 188/422 (44.55%), Query Frame = 1
Query: 610 PNAAPTIASIDDQALEEGESTS-VTIEIADADTPLSELSITATSGDASVLSVALAIPEGSGAAELHLTRLAVS--GPTLVTVTAGDGTNETSTTFEVATLIVDRVLPTISSIDNQELTVGETTLLPLS--VADEDTPLSEVSVTATSDDDSVLPEGSISVEGTGAERTLSLSPAKSG-GPVSVTVTVNDGVHTATKTFNVTVTAIEQVTPGLARHYTFNGG---DTSDHSGRQQDAEVHGATLTEDRFGNADSAYLFDGVDDFISASNESLPAENDSRTIAVWARFDSAPVSSVLAAYGSNSN----GQQSGLRVVQGKWQGSFWGFASDLNTGKSAPQGE-WVHVALTYDAASKTATFYENGIKVKEKTNLTPNTVLSPNGLTLGKLPQSQGSTSF--YFHGALDDVRVYDTALTAVDIAA 1827
PN APTI++I DQ E S + + D +T L+++ +S D +V+ GSGA A + G +TVT DG S+ F + V+ PTIS I NQ TV T P++ V D +T ++V+ +S D +++P G+I G+GA RT++++PA G ++TV V+DG ++ F +TV A GL Y+FN G D SG + GA+ T G S +F+G ++ ++ T+ W + + Y N N G ++ G G+ G W H+ALTYD A+ Y NG +V T + S N L +G G + + YF G +D+VRVY+ AL+A I A
Sbjct: 208 PNTAPTISAIADQVTNEDTSAGPINFTVGDVETGAGSLTVSGSSSDVTVVPNGNIAFGGSGANRTVTVMPAANQNGTATITVTVSDGALTGSSRFALTVNAVNDA-PTISGIANQTTTVN-TAAGPINFTVGDVETGAGSLTVSGSSSDVTLVPNGNIVFGGSGANRTVTVTPAGGQTGTATITVAVSDGQLSSNTWFTLTVNASGPPATGLVGAYSFNEGAGTSVGDGSGNGNVGTISGASWTS--AGKYGSGLVFNGSGARVTINDSGSLHLTTGMTLEAWVNATTVSSAWRDVIYKGNDNYFLEGTSDNNKLPGG---GATLGXXXXXXXXXXXXXXXXWTHLALTYDGAA--LRLYVNGTQVSSVAK-TGTILTSTNPLQIG------GDSMYGQYFAGTIDEVRVYNVALSAAQIQA 613
BLAST of mRNA_D-mesarthrocarpus_Contig10447.1.1 vs. uniprot
Match: A0A522VBI9_9GAMM (LamG domain-containing protein n=1 Tax=Methylococcaceae bacterium TaxID=1933926 RepID=A0A522VBI9_9GAMM) HSP 1 Score: 106 bits (264), Expect = 7.220e-20 Identity = 78/223 (34.98%), Postives = 119/223 (53.36%), Query Frame = 1
Query: 1198 TAIEQVTPGLARHYTFNGGDTSDHSGRQQDAEVHGATLTEDRFGNADSAYLFDGVDDFISASNESLPAE-NDSRTIAVWARF-DSAPVSSVLAAYGSNSNGQQSGLRVVQGKWQGSFWGFASDL--NTGKSAPQGEWVHVALTYDAASKTATFYENGIKVKEKTNLTPNTVLSPNGLTLGKLPQSQGSTSFYFHGALDDVRVYDTALTAVDIAAIRDAQPTES 1854
TA+ + GL +Y FNG + +D +G + ++ ATLTEDRFGN++SAY FDG +I + + + + N SR+I VW + D V+ + SN + L + G Q G+A+DL NTG A GEW V T+D + T++ + +GI +K T NT + N + S T YF+G +DDVR+Y+ ALT +I + A T++
Sbjct: 20 TALADLNEGLVAYYPFNG-NANDETGAGNNGTINNATLTEDRFGNSNSAYAFDGSTSYIDLTGKPIAQQGNGSRSIFVWCKTTDQKSFQRVVVTGTTGSNRAFNMLLWING--QPGIMGYANDLYMNTGTIA-NGEWHFVGATFDGS--TSSIWVDGI-LKASKQTTYNTTGNNNFIGRPNDDPSNAGTETYFNGNIDDVRIYNRALTPEEIQQLYTANGTDT 235 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10447.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10447.1.1 >prot_D-mesarthrocarpus_Contig10447.1.1 ID=prot_D-mesarthrocarpus_Contig10447.1.1|Name=mRNA_D-mesarthrocarpus_Contig10447.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=776bp EGLKVTVDTTNVAENGGVATVTVTRGQFSVNAAETLAVKVGDSSELSGPDback to top mRNA from alignment at D-mesarthrocarpus_Contig10447:408..3716- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10447.1.1 ID=mRNA_D-mesarthrocarpus_Contig10447.1.1|Name=mRNA_D-mesarthrocarpus_Contig10447.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3309bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10447:408..3716- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10447:408..3716- >mRNA_D-mesarthrocarpus_Contig10447.1.1 ID=mRNA_D-mesarthrocarpus_Contig10447.1.1|Name=mRNA_D-mesarthrocarpus_Contig10447.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=2328bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10447:408..3716- (Discosporangium mesarthrocarpum MT17_79)back to top |