mRNA_D-mesarthrocarpus_Contig10434.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10434.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig10434.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10434.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10434contigD-mesarthrocarpus_Contig10434:3614..3955 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Model size343
Hectar predicted targeting categorysignal anchor
Exons1
Cds size342
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789182.0127623-CDS-D-mesarthrocarpus_Contig10434:3613..39551680789182.0127623-CDS-D-mesarthrocarpus_Contig10434:3613..3955Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10434 3614..3955 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10434.2.1prot_D-mesarthrocarpus_Contig10434.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10434 3614..3955 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10434.2.1

>prot_D-mesarthrocarpus_Contig10434.2.1 ID=prot_D-mesarthrocarpus_Contig10434.2.1|Name=mRNA_D-mesarthrocarpus_Contig10434.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=114bp
EKVLPRCFPDFKTLSSQASARSTDAWVAGFLFFFFSSLVLGLGLTPRSRP
TRSIPQVVYFLYGICLLYGIYLLYGIYLLYSIYSTPCCTISPHKPLSFCH
PDSPLQHCHRGPL*
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mRNA from alignment at D-mesarthrocarpus_Contig10434:3614..3955-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10434.2.1 ID=mRNA_D-mesarthrocarpus_Contig10434.2.1|Name=mRNA_D-mesarthrocarpus_Contig10434.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=342bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10434:3614..3955- (Discosporangium mesarthrocarpum MT17_79)
GAAAAAGTGCTGCCGCGCTGCTTCCCAGATTTCAAAACGTTGAGCTCGCA
AGCTTCTGCCCGTTCAACAGACGCATGGGTGGCCGGATTTTTGTTCTTTT
TTTTTTCTTCTTTGGTCTTAGGGTTAGGGTTAACTCCACGTTCTCGTCCT
ACCCGCAGTATACCCCAGGTGGTATACTTCCTCTACGGTATATGCTTACT
CTACGGTATATATTTACTCTACGGTATATACTTACTCTACAGTATATACT
CTACCCCGTGTTGCACCATTTCCCCACACAAACCCCTCTCTTTCTGCCAC
CCTGATTCCCCGCTGCAACACTGCCACAGGGGACCACTTTGA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10434:3614..3955-

>mRNA_D-mesarthrocarpus_Contig10434.2.1 ID=mRNA_D-mesarthrocarpus_Contig10434.2.1|Name=mRNA_D-mesarthrocarpus_Contig10434.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=342bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10434:3614..3955- (Discosporangium mesarthrocarpum MT17_79)
GAAAAAGTGCTGCCGCGCTGCTTCCCAGATTTCAAAACGTTGAGCTCGCA
AGCTTCTGCCCGTTCAACAGACGCATGGGTGGCCGGATTTTTGTTCTTTT
TTTTTTCTTCTTTGGTCTTAGGGTTAGGGTTAACTCCACGTTCTCGTCCT
ACCCGCAGTATACCCCAGGTGGTATACTTCCTCTACGGTATATGCTTACT
CTACGGTATATATTTACTCTACGGTATATACTTACTCTACAGTATATACT
CTACCCCGTGTTGCACCATTTCCCCACACAAACCCCTCTCTTTCTGCCAC
CCTGATTCCCCGCTGCAACACTGCCACAGGGGACCACTTTGA
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