mRNA_D-mesarthrocarpus_Contig10422.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10422.1.1 vs. uniprot
Match: D7FXK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXK8_ECTSI) HSP 1 Score: 128 bits (321), Expect = 2.190e-34 Identity = 59/94 (62.77%), Postives = 70/94 (74.47%), Query Frame = 1
Query: 49 TNPGTRLKTWSNPKGADLVRIAERLWVAERPFMWNGIDCARFKIILGGRMTVAQLADGTLWVHSPVDLDSPLRKALDELGPVAHIVSPNYEHVK 330
T G R TWSNP G D+V++ +W AERPF+WNGID +GGRM V +L+DG+LWVHSPVDLD PL++AL LGPV HIVSPNYEHVK
Sbjct: 10 TTAGRREMTWSNPMGDDMVQVLGDVWCAERPFVWNGID-------VGGRMAVVKLSDGSLWVHSPVDLDEPLKEALASLGPVGHIVSPNYEHVK 96
BLAST of mRNA_D-mesarthrocarpus_Contig10422.1.1 vs. uniprot
Match: A0A835ZG26_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG26_9STRA) HSP 1 Score: 122 bits (307), Expect = 3.000e-32 Identity = 62/107 (57.94%), Postives = 71/107 (66.36%), Query Frame = 1
Query: 19 SATITPVETYTNPGTRL---KTWSNPKGADLVRIAERLWVAERPFMWNGIDCARFKIILGGRMTVAQLADGTLWVHSPVDLDSPLRKALDELGPVAHIVSPNYEHVK 330
S T TP P R KTWSNPKG DL I +W AERPF+WN ID +GGRMTV +L DG+LWVHSPV+LD L++ L ELGPV H+VSPNYEHVK
Sbjct: 2 SQTATPAPQQAAPARRNARDKTWSNPKGLDLTPIKHNVWGAERPFIWNTID-------VGGRMTVIKLEDGSLWVHSPVELDPALQQTLAELGPVRHVVSPNYEHVK 101
BLAST of mRNA_D-mesarthrocarpus_Contig10422.1.1 vs. uniprot
Match: A0A812QRP3_9DINO (Hypothetical protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812QRP3_9DINO) HSP 1 Score: 118 bits (295), Expect = 7.790e-31 Identity = 59/108 (54.63%), Postives = 73/108 (67.59%), Query Frame = 1
Query: 7 ATAFSATITPVETYTNPGTRLKTWSNPKGADLVRIAERLWVAERPFMWNGIDCARFKIILGGRMTVAQLADGTLWVHSPVDLDSPLRKALDELGPVAHIVSPNYEHVK 330
AT+ +AT + T P T WSNP G+ L + LWVAERPF+WN ID +GG+M V +L DG LWVHSPV+LD LR+AL++LGPV HIVSPN+EHVK
Sbjct: 1 ATSTAATSDTIAAATYPST----WSNPSGSVLTALNTDLWVAERPFIWNSID-------VGGKMAVVRLPDGGLWVHSPVELDEELREALEQLGPVRHIVSPNFEHVK 97
BLAST of mRNA_D-mesarthrocarpus_Contig10422.1.1 vs. uniprot
Match: A0A812Q2U2_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812Q2U2_9DINO) HSP 1 Score: 117 bits (293), Expect = 1.060e-29 Identity = 54/87 (62.07%), Postives = 64/87 (73.56%), Query Frame = 1
Query: 70 KTWSNPKGADLVRIAERLWVAERPFMWNGIDCARFKIILGGRMTVAQLADGTLWVHSPVDLDSPLRKALDELGPVAHIVSPNYEHVK 330
+TWSNP G+ L + LWVAERPF+WN ID +GG+M V +L DG LWVHSPVDLD LRK L++LGPV HIVSPN+EHVK
Sbjct: 79 QTWSNPTGSVLTALNTDLWVAERPFIWNSID-------VGGKMAVVRLPDGGLWVHSPVDLDEELRKGLEQLGPVRHIVSPNFEHVK 158
BLAST of mRNA_D-mesarthrocarpus_Contig10422.1.1 vs. uniprot
Match: A0A1Q9E991_SYMMI (Uncharacterized protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9E991_SYMMI) HSP 1 Score: 120 bits (300), Expect = 1.730e-29 Identity = 61/110 (55.45%), Postives = 73/110 (66.36%), Query Frame = 1
Query: 1 RWATAFSATITPVETYTNPGTRLKTWSNPKGADLVRIAERLWVAERPFMWNGIDCARFKIILGGRMTVAQLADGTLWVHSPVDLDSPLRKALDELGPVAHIVSPNYEHVK 330
R AT+ +AT + T P T WSNP G+ L + LWVAERPF+WN ID +GG+M V +L DG LWVHSPV+LD LR ALD+LGPV HIVSPN+EHVK
Sbjct: 294 RGATSTAATSDTIAAATYPST----WSNPSGSVLTALNTDLWVAERPFIWNSID-------VGGKMAVVRLPDGGLWVHSPVELDEELRDALDQLGPVRHIVSPNFEHVK 392
BLAST of mRNA_D-mesarthrocarpus_Contig10422.1.1 vs. uniprot
Match: A0A7S0DC47_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0DC47_MICPS) HSP 1 Score: 113 bits (283), Expect = 2.830e-28 Identity = 53/88 (60.23%), Postives = 63/88 (71.59%), Query Frame = 1
Query: 70 KTWSNPKGADLVRIAERL-WVAERPFMWNGIDCARFKIILGGRMTVAQLADGTLWVHSPVDLDSPLRKALDELGPVAHIVSPNYEHVK 330
KTWSNP G L + + + W AERPF WN ID +GG+M V +L DG LWVHSPVDLD+P +KA+D LGPV H+VSPNYEHVK
Sbjct: 62 KTWSNPTGQVLTPVVDGVVWAAERPFTWNTID-------VGGKMGVVKLEDGALWVHSPVDLDAPTKKAVDALGPVRHVVSPNYEHVK 142
BLAST of mRNA_D-mesarthrocarpus_Contig10422.1.1 vs. uniprot
Match: A0A1Y1IMY2_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IMY2_KLENI) HSP 1 Score: 110 bits (274), Expect = 8.340e-27 Identity = 50/86 (58.14%), Postives = 63/86 (73.26%), Query Frame = 1
Query: 70 KTWSNPKGADLVRIAE-RLWVAERPFMWNGIDCARFKIILGGRMTVAQLADGTLWVHSPVDLDSPLRKALDELGPVAHIVSPNYEH 324
KTWSNP G L + ++W AERPFMWNGID +GG+M V +L DG++WVHSPV LD+ L+ A+D+LGPV HIV+PNYEH
Sbjct: 91 KTWSNPSGNVLTEVVPGQVWAAERPFMWNGID-------VGGKMGVVRLRDGSVWVHSPVPLDNQLKAAMDQLGPVKHIVTPNYEH 169
BLAST of mRNA_D-mesarthrocarpus_Contig10422.1.1 vs. uniprot
Match: A0A7S4C8N9_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4C8N9_9EUGL) HSP 1 Score: 112 bits (281), Expect = 9.110e-27 Identity = 52/85 (61.18%), Postives = 64/85 (75.29%), Query Frame = 1
Query: 76 WSNPKGADLVRIAERLWVAERPFMWNGIDCARFKIILGGRMTVAQLADGTLWVHSPVDLDSPLRKALDELGPVAHIVSPNYEHVK 330
WSNP L ++A LWVAERPF+WN ID +GG+M V +LADG+LWVHSPV+LD+PL+ AL LGPV +I+SPNYEHVK
Sbjct: 176 WSNPGKEVLKKVAPDLWVAERPFIWNSID-------VGGKMAVVRLADGSLWVHSPVELDAPLKAALAALGPVKYIMSPNYEHVK 253
BLAST of mRNA_D-mesarthrocarpus_Contig10422.1.1 vs. uniprot
Match: A0A7S0IGZ2_MICPS (Hypothetical protein n=2 Tax=Micromonas TaxID=38832 RepID=A0A7S0IGZ2_MICPS) HSP 1 Score: 107 bits (267), Expect = 4.240e-26 Identity = 51/99 (51.52%), Postives = 66/99 (66.67%), Query Frame = 1
Query: 37 VETYTNPGTRLKTWSNPKGADLVRIAERLWVAERPFMWNGIDCARFKIILGGRMTVAQLADGTLWVHSPVDLDSPLRKALDELG-PVAHIVSPNYEHVK 330
T+ P + WSNP G+ L + E++W AERPF+W GID +GG+M V ++ DG+LWVHSPVDLD LR AL E+G V H+VSPN+EHVK
Sbjct: 35 ARTFPPPRSHDYDWSNPSGSVLTPLREKVWAAERPFVWQGID-------VGGKMGVVKMRDGSLWVHSPVDLDDDLRAALTEIGGDVKHVVSPNFEHVK 126
BLAST of mRNA_D-mesarthrocarpus_Contig10422.1.1 vs. uniprot
Match: C1MGP7_MICPC (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1MGP7_MICPC) HSP 1 Score: 105 bits (263), Expect = 1.650e-25 Identity = 50/88 (56.82%), Postives = 58/88 (65.91%), Query Frame = 1
Query: 70 KTWSNPKGADLVRIAERL-WVAERPFMWNGIDCARFKIILGGRMTVAQLADGTLWVHSPVDLDSPLRKALDELGPVAHIVSPNYEHVK 330
KTWSNP G L + + W AERPF WN ID +GG+M V +L DG LWVHSP+DLD R A+D LG V H+VSPNYEHVK
Sbjct: 49 KTWSNPTGNVLTDVVPGVVWAAERPFTWNAID-------VGGKMAVVRLRDGALWVHSPIDLDDATRAAIDALGSVKHVVSPNYEHVK 129 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10422.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10422.1.1 >prot_D-mesarthrocarpus_Contig10422.1.1 ID=prot_D-mesarthrocarpus_Contig10422.1.1|Name=mRNA_D-mesarthrocarpus_Contig10422.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=111bp RWATAFSATITPVETYTNPGTRLKTWSNPKGADLVRIAERLWVAERPFMWback to top mRNA from alignment at D-mesarthrocarpus_Contig10422:3407..3870+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10422.1.1 ID=mRNA_D-mesarthrocarpus_Contig10422.1.1|Name=mRNA_D-mesarthrocarpus_Contig10422.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=464bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10422:3407..3870+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10422:3407..3870+ >mRNA_D-mesarthrocarpus_Contig10422.1.1 ID=mRNA_D-mesarthrocarpus_Contig10422.1.1|Name=mRNA_D-mesarthrocarpus_Contig10422.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=333bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10422:3407..3870+ (Discosporangium mesarthrocarpum MT17_79)back to top |