mRNA_D-mesarthrocarpus_Contig10416.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10416.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10416.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10416.1.1 vs. uniprot
Match: D8LEA9_ECTSI (FYVE-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEA9_ECTSI)

HSP 1 Score: 355 bits (911), Expect = 1.270e-117
Identity = 162/213 (76.06%), Postives = 191/213 (89.67%), Query Frame = 1
Query:   76 GLVPPRWVPDEDIIRCTGCRKDFDWARRKHHCRSCGQVFCYSCSRFRALMPRSFGTHDPQRLCQPCHSRVVPLQEELIGSVSNAMKENDVSRGGLSSYMNRPVAFTLGAEIRKAAYTIHNFTNEGIIQDRSIPQELLSKAKGLAFLTVIKGGFIVAGRLGTGLVVAKTSSGEWSAPSAIATVGISWGVLIGGEITDFVLVLNTDSAVEAFLGR 714
            GL PP+W+PDED   C+GC +DFDWARR+HHCR CG +FCY+CS+FRAL+PRSFG+ DPQRLCQPC++RV PLQE L  SVSNA+KENDV RG ++SY+NRP+ FTLGAE+RKAAYTIHNF+ EG+IQD+SIPQELLS+AKGLAFLTVIKGGFIVAGR+GTGLV++KT  G WSAPSAIAT+G+ WG LIGGEITDFVLVLNTD+A+EAF GR
Sbjct:  224 GLKPPKWLPDEDTSSCSGCGRDFDWARRRHHCRLCGGIFCYACSQFRALLPRSFGSRDPQRLCQPCNARVAPLQEMLAESVSNAVKENDVERGTVASYLNRPIVFTLGAEVRKAAYTIHNFSKEGMIQDQSIPQELLSRAKGLAFLTVIKGGFIVAGRVGTGLVISKTDEGVWSAPSAIATLGMGWGALIGGEITDFVLVLNTDAALEAFSGR 436          
BLAST of mRNA_D-mesarthrocarpus_Contig10416.1.1 vs. uniprot
Match: A0A835Z286_9STRA (FYVE-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z286_9STRA)

HSP 1 Score: 256 bits (655), Expect = 2.510e-80
Identity = 127/258 (49.22%), Postives = 164/258 (63.57%), Query Frame = 1
Query:   79 LVPPRWVPDEDIIRCTGCRKDFDWARRKHHCRSCGQVFCYSCSRFRALMPRSFGTHDPQRLCQPCHSRVVPLQEELIGSVSNAMKENDVSRG---GLSSYMNRPVAFTLGAEIRKAAYTIHNFTNEGIIQDRSIPQELLSKAKGLAFLTVIKGGFIVAGRLGTGLVV-------------AKTSSG---------------------------------EWSAPSAIATVGISWGVLIGGEITDFVLVLNTDSAVEAF 705
            + PPRW+PDED++ C  C K FDWARRKHHCR CG +FC SCS++++L+PRSFGT DPQR+C+ C++ +  LQE L  ++SNA+K N VS+    GLS Y+N+P++FTLGAE+RKAAY++ NF   G++QD SIP ELL++AKGLAF+TV+K G    G  GTGLV+             A  S G                                 EWSAPSAI TVG+ WG  IG  +TD VLVL T++AVEAF
Sbjct:   83 ITPPRWIPDEDVLACVKCNKAFDWARRKHHCRCCGGIFCASCSKYQSLLPRSFGTRDPQRVCKACNASLAHLQEHLQATLSNAVKANQVSKSEKPGLSPYLNKPLSFTLGAEVRKAAYSVLNFMRTGVVQDNSIPTELLARAKGLAFMTVLKAGCFWTGSFGTGLVISRLPAERCCHPSAASLSDGDSAAAPEQXXPLSVAAAAYGSSAQLMRRPPRRLEWSAPSAIGTVGMGWGAAIGANVTDVVLVLTTNAAVEAF 340          
BLAST of mRNA_D-mesarthrocarpus_Contig10416.1.1 vs. uniprot
Match: A0A6V1LWE2_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1LWE2_HETAK)

HSP 1 Score: 256 bits (653), Expect = 7.360e-80
Identity = 119/219 (54.34%), Postives = 163/219 (74.43%), Query Frame = 1
Query:   88 PRWVPDEDIIRCTGCRKDFDWARRKHHCRSCGQVFCYSCSRFRALMPRSFGTHDPQRLCQPCHSRVVPLQEELIGSVSNAMKENDVS-RGGLSSYMNRPVAFTLGAEIRKAAYTIHNFTNE---------GIIQDRSIPQELLSKAKGLAFLTVIKGGFIVAGRLGTGLVVAKTSSGEWSAPSAIATVGISWGVLIGGEITDFVLVLNTDSAVEAFLGR 714
            PRWVPDE++  CT C+  FDWA RKHHCR+CG++FC SCS  +AL+P+ F   DP+R+C PC   + PLQ+EL+ ++SN+++EN +     L  +++ P + TLGA +RKAA+TI N T+          G+++D+SIP E L +A+GLAFLTV K GF++AG+ GTGLVVA+   G W+APSAIATVG++WG+LIGGEITD+V++LNT  AVEAF GR
Sbjct:  125 PRWVPDEEVTHCTQCQVMFDWAVRKHHCRACGRIFCQSCSENKALLPKEFCDRDPKRVCDPCFRALQPLQDELVATMSNSIRENHIDPNSALERHVHNPFSTTLGACVRKAAHTILNMTDTHTTDHINGMGVVKDQSIPIEYLRRARGLAFLTVAKMGFVLAGKAGTGLVVARRPDGGWTAPSAIATVGVNWGLLIGGEITDYVILLNTQKAVEAFSGR 343          
BLAST of mRNA_D-mesarthrocarpus_Contig10416.1.1 vs. uniprot
Match: A0A5D6Y5S5_9STRA (FYVE-type domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y5S5_9STRA)

HSP 1 Score: 248 bits (634), Expect = 3.610e-78
Identity = 118/226 (52.21%), Postives = 156/226 (69.03%), Query Frame = 1
Query:   82 VPP---RWVPDEDIIRCTGCRKDFDWARRKHHCRSCGQVFCYSCSRFRALMPR------------SFGTHDPQRLCQPCHSRVVPLQEELIGSVSNAMKENDVSRGGLSSYMNRPVAFTLGAEIRKAAYTIHNFTNEGIIQDRSIPQELLSKAKGLAFLTVIKGGFIVAGRLGTGLVVAKTSSGEWSAPSAIATVGISWGVLIGGEITDFVLVLNTDSAVEAFLGR 714
            +PP   RW+PD ++  C GC+  FDW RRKHHCR CG VFC  C+  R+L+P             S   H+PQR+C  C + ++P Q EL G++SNA++EN++   G   ++N P +FTL  EIRKAAY++ NF  +G+I+D+SIP  LL+ AKG+AFLTVIK GF+  GR+GTGLV+A+   G WSAPSAIAT G+ WG  IGGEITDFV+VLNT  AV+AF  +
Sbjct:   10 LPPTTVRWIPDAEVSLCFGCQLLFDWVRRKHHCRFCGHVFCDLCTPRRSLIPADQILANPERQYLSVNAHNPQRVCDDCFNALLPAQAELRGTMSNAVQENELDEAGAKRFLNSPYSFTLREEIRKAAYSVKNFMYQGVIKDQSIPLPLLTHAKGIAFLTVIKVGFVFTGRVGTGLVIARLPDGRWSAPSAIATAGVGWGAQIGGEITDFVIVLNTKRAVDAFCSK 235          
BLAST of mRNA_D-mesarthrocarpus_Contig10416.1.1 vs. uniprot
Match: A0A835YJX3_9STRA (FYVE-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJX3_9STRA)

HSP 1 Score: 245 bits (625), Expect = 2.330e-77
Identity = 118/215 (54.88%), Postives = 147/215 (68.37%), Query Frame = 1
Query:   76 GLVPPRWVPDEDIIRCTGCRKDFDWARRKHHCRSCGQVFCYSCSRFRALMPRSFGTHDPQRLCQPCHSRVVPLQEELIGSVSNAMKENDVSRG---GLSSYMNRPVAFTLGAEIRKAAYTIHNFTNEGIIQDRSIPQELLSKAKGLAFLTVIKGGFIVAGRLGTGLVVAKTSSGEWSAPSAIATVGISWGVLIGGEITDFVLVLNTDSAVEAFLG 711
            GL PPRW PD   + C  C + FDWARRKHH               +AL+PRSFGT DPQR+C  C + + PLQ +LI + SNA++ N+V+ G   GLS Y+N+P++FTLGAE+RKAAY++ NF   G++QD SIP ELL+ AKGLAF+TV+K G +  G  GTGLV     S EWSAPSAI T+G+ WG  IG  ITD VLVLNT +AVEAF G
Sbjct:    5 GLAPPRWTPDAQAVNCHNCGRLFDWARRKHHXXXXXXXXXXXXXXXQALLPRSFGTRDPQRVCDECKTTLEPLQADLINTFSNAVRANEVANGAKRGLSPYLNKPLSFTLGAEVRKAAYSVFNFMRAGVVQDSSIPTELLTCAKGLAFITVLKAGVVWVGNFGTGLVQCHLLSTEWSAPSAIGTIGMGWGACIGANITDVVLVLNTAAAVEAFCG 219          
BLAST of mRNA_D-mesarthrocarpus_Contig10416.1.1 vs. uniprot
Match: K3X8G2_GLOUD (FYVE-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X8G2_GLOUD)

HSP 1 Score: 240 bits (613), Expect = 3.400e-75
Identity = 111/220 (50.45%), Postives = 153/220 (69.55%), Query Frame = 1
Query:   91 RWVPDEDIIRCTGCRKDFDWARRKHHCRSCGQVFCYSCSRFRALMPR------------SFGTHDPQRLCQPCHSRVVPLQEELIGSVSNAMKENDVSRGGLSSYMNRPVAFTLGAEIRKAAYTIHNFTNEGIIQDRSIPQELLSKAKGLAFLTVIKGGFIVAGRLGTGLVVAKTSSGEWSAPSAIATVGISWGVLIGGEITDFVLVLNTDSAVEAFLGR 714
            RW+PD ++  C GC+  FDW RRKHHCR CG VFC  C+  R+L+              S   H+PQR+C  C++ ++P+Q EL  ++SNA++ N++   G   ++N P +FTL  EIRKAAY++ NF  +G+I+D+SIP  L+++A+G+AFLTVIK GF+  GR+GTGLVVA+   G WSAPSAIAT G+ WG  IGGEITDFV++LNT  AV+AF  +
Sbjct:   30 RWIPDAEVSLCFGCKLLFDWVRRKHHCRYCGYVFCDLCTTHRSLIREDQILSNPERQYLSVNGHNPQRVCDECYNALLPVQAELRETMSNAVQHNNIDEAGPKRFLNSPYSFTLREEIRKAAYSVKNFMYQGVIKDQSIPLPLITQAQGIAFLTVIKVGFVFTGRVGTGLVVARLPDGRWSAPSAIATAGVGWGAQIGGEITDFVIILNTKRAVDAFCSK 249          
BLAST of mRNA_D-mesarthrocarpus_Contig10416.1.1 vs. uniprot
Match: A0A833RX76_PHYIN (Las17-binding protein actin regulator n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833RX76_PHYIN)

HSP 1 Score: 240 bits (612), Expect = 1.370e-74
Identity = 114/217 (52.53%), Postives = 149/217 (68.66%), Query Frame = 1
Query:   91 RWVPDEDIIRCTGCRKDFDWARRKHHCRSCGQVFCYSCSRFRALMPR------------SFGTHDPQRLCQPCHSRVVPLQEELIGSVSNAMKENDVSRGGLSSYMNRPVAFTLGAEIRKAAYTIHNFTNEGIIQDRSIPQELLSKAKGLAFLTVIKGGFIVAGRLGTGLVVAKTSSGEWSAPSAIATVGISWGVLIGGEITDFVLVLNTDSAVEAF 705
            RW+PD ++  C GC+  FDW RRKHHCR CG VFC  C+  R+L+              +   H+PQR+C  CH+R+ P QEEL  ++S+A+++ +V   G   + N P +FTL  EIRKA Y++ NFT +G+++D+SIP  LL+ AKG+AFLTVIK GF+  GR+GTGLVVAK   G WSAPSAI T G+ WG  IGGEITDFV++LNT  AVEAF
Sbjct:   19 RWIPDAEVSVCYGCQLLFDWVRRKHHCRYCGHVFCELCTPQRSLIREDQILTNPERKYLAVNAHNPQRVCDDCHARLEPEQEELRRTMSHAVQQMEVKESGPQRFFNSPYSFTLREEIRKATYSVKNFTFQGVVKDQSIPLPLLTHAKGIAFLTVIKMGFVFTGRMGTGLVVAKLPDGRWSAPSAIGTAGLGWGPQIGGEITDFVIILNTQRAVEAF 235          
BLAST of mRNA_D-mesarthrocarpus_Contig10416.1.1 vs. uniprot
Match: A0A067CDH3_SAPPC (FYVE-type domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CDH3_SAPPC)

HSP 1 Score: 239 bits (611), Expect = 1.540e-74
Identity = 113/220 (51.36%), Postives = 151/220 (68.64%), Query Frame = 1
Query:   91 RWVPDEDIIRCTGCRKDFDWARRKHHCRSCGQVFCYSCSRFRALM--------PR----SFGTHDPQRLCQPCHSRVVPLQEELIGSVSNAMKENDVSRGGLSSYMNRPVAFTLGAEIRKAAYTIHNFTNEGIIQDRSIPQELLSKAKGLAFLTVIKGGFIVAGRLGTGLVVAKTSSGEWSAPSAIATVGISWGVLIGGEITDFVLVLNTDSAVEAFLGR 714
            RW+PD ++  C  C   FDW RRKHHCR CG VFC  C+ FR+L+        P     S   ++PQR+C+PC++ ++P Q  L  + SNA++ N +S  G   ++N P +FTL  EIRKAAY++ NF  +G+I+D+SIP  LL+ AKG+AFLTV+K GF+V GR+GTGLV+AK   G WSAPSAIAT GI WG  IGG +TDFV++LNT SAV+ F  +
Sbjct:   23 RWIPDAEVSLCKACGLLFDWVRRKHHCRYCGHVFCDLCTTFRSLIRDDKILTSPEKRYLSVNAYNPQRVCEPCYTLLLPDQSLLCATASNAVQPNSISEAGSKRFLNSPYSFTLREEIRKAAYSVKNFMYDGVIKDQSIPLPLLTNAKGIAFLTVLKVGFVVTGRVGTGLVIAKLPDGSWSAPSAIATAGIGWGAQIGGGVTDFVIILNTRSAVDTFCAQ 242          
BLAST of mRNA_D-mesarthrocarpus_Contig10416.1.1 vs. uniprot
Match: M4BN30_HYAAE (FYVE-type domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BN30_HYAAE)

HSP 1 Score: 239 bits (610), Expect = 1.940e-74
Identity = 115/217 (53.00%), Postives = 149/217 (68.66%), Query Frame = 1
Query:   91 RWVPDEDIIRCTGCRKDFDWARRKHHCRSCGQVFCYSCSRFRALMPRS------------FGTHDPQRLCQPCHSRVVPLQEELIGSVSNAMKENDVSRGGLSSYMNRPVAFTLGAEIRKAAYTIHNFTNEGIIQDRSIPQELLSKAKGLAFLTVIKGGFIVAGRLGTGLVVAKTSSGEWSAPSAIATVGISWGVLIGGEITDFVLVLNTDSAVEAF 705
            RW+PD ++  C+ C   FDW  RKHHCR CG VFC  C+  R+L+P +               H+PQR+C  C++R+ P QEEL  ++S+A++E DV        +N P ++TL  EI KA Y+I NFT++GI++DRSIP  LL+ AKG+AFLTVIK GF+  GR+GTGLVVAK + G WSAPSAIAT G+ WG  +GGEITDFV+VLNT  AVEAF
Sbjct:   10 RWIPDAEVSVCSSCELLFDWMHRKHHCRYCGYVFCELCTLHRSLIPANQILSGSECKYLAVNAHNPQRVCDKCYARLEPQQEELRITMSHAVQETDVKVSSAPRLVNSPYSYTLKEEILKATYSIKNFTSQGIVKDRSIPLPLLTHAKGIAFLTVIKMGFVFTGRMGTGLVVAKLADGRWSAPSAIATAGVGWGAQVGGEITDFVIVLNTPRAVEAF 226          
BLAST of mRNA_D-mesarthrocarpus_Contig10416.1.1 vs. uniprot
Match: A0A225WGT7_9STRA (FYVE-type domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A225WGT7_9STRA)

HSP 1 Score: 239 bits (610), Expect = 2.120e-74
Identity = 114/217 (52.53%), Postives = 150/217 (69.12%), Query Frame = 1
Query:   91 RWVPDEDIIRCTGCRKDFDWARRKHHCRSCGQVFCYSCSRFRALMPR------------SFGTHDPQRLCQPCHSRVVPLQEELIGSVSNAMKENDVSRGGLSSYMNRPVAFTLGAEIRKAAYTIHNFTNEGIIQDRSIPQELLSKAKGLAFLTVIKGGFIVAGRLGTGLVVAKTSSGEWSAPSAIATVGISWGVLIGGEITDFVLVLNTDSAVEAF 705
            RW+PD ++  C GC+  FDW RRKHHCR CG VFC  C+  R+L+ +            +   H+PQR+C  CH+R+ P QEEL  ++S+A+++  V+  G   + N P AFTL  EIRKA Y++ NFT +G+++D+SIP  LL+ AKG+AFLTVIK GF+  GR+GTGLVVA+   G WSAPSAI T G+ WG  IGGEITDFV++LNT  AVEAF
Sbjct:    7 RWIPDAEVSVCYGCQLLFDWVRRKHHCRLCGCVFCELCTPQRSLIRQEQILSSPERTYLAVNAHNPQRVCDDCHARLAPEQEELRMTMSHAVQQTQVTDSGPQRFFNSPYAFTLREEIRKATYSVKNFTFQGVVKDQSIPLPLLTHAKGIAFLTVIKMGFVFTGRMGTGLVVARLPDGRWSAPSAIGTAGVGWGPQIGGEITDFVIILNTHRAVEAF 223          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10416.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEA9_ECTSI1.270e-11776.06FYVE-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A835Z286_9STRA2.510e-8049.22FYVE-type domain-containing protein n=1 Tax=Tribon... [more]
A0A6V1LWE2_HETAK7.360e-8054.34Hypothetical protein n=3 Tax=Heterosigma akashiwo ... [more]
A0A5D6Y5S5_9STRA3.610e-7852.21FYVE-type domain-containing protein n=1 Tax=Pythiu... [more]
A0A835YJX3_9STRA2.330e-7754.88FYVE-type domain-containing protein n=1 Tax=Tribon... [more]
K3X8G2_GLOUD3.400e-7550.45FYVE-type domain-containing protein n=1 Tax=Globis... [more]
A0A833RX76_PHYIN1.370e-7452.53Las17-binding protein actin regulator n=1 Tax=Phyt... [more]
A0A067CDH3_SAPPC1.540e-7451.36FYVE-type domain-containing protein n=2 Tax=Saprol... [more]
M4BN30_HYAAE1.940e-7453.00FYVE-type domain-containing protein n=1 Tax=Hyalop... [more]
A0A225WGT7_9STRA2.120e-7452.53FYVE-type domain-containing protein n=2 Tax=Phytop... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10416contigD-mesarthrocarpus_Contig10416:1017..4288 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LEA9
PFAMsFYVE,SAGA-Tad1,Ysc84
Model size714
Max annot lvl2759|Eukaryota
KEGG koko:K20523
Hectar predicted targeting categoryother localisation
Exons5
Evalue2.08e-118
EggNOG OGsCOG2930@1|root,KOG1843@2759|Eukaryota
Ec32 ortholog descriptionFYVE zinc finger
Ec32 orthologEc-00_001550.1
Descriptionregulation of ruffle assembly
Cds size714
COG categoryO
BRITEko00000,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789180.5120292-CDS-D-mesarthrocarpus_Contig10416:1016..11781680789180.5120292-CDS-D-mesarthrocarpus_Contig10416:1016..1178Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10416 1017..1178 +
1680789180.5295818-CDS-D-mesarthrocarpus_Contig10416:2035..21831680789180.5295818-CDS-D-mesarthrocarpus_Contig10416:2035..2183Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10416 2036..2183 +
1680789180.5430965-CDS-D-mesarthrocarpus_Contig10416:2602..27381680789180.5430965-CDS-D-mesarthrocarpus_Contig10416:2602..2738Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10416 2603..2738 +
1680789180.552094-CDS-D-mesarthrocarpus_Contig10416:3193..32741680789180.552094-CDS-D-mesarthrocarpus_Contig10416:3193..3274Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10416 3194..3274 +
1680789180.5610178-CDS-D-mesarthrocarpus_Contig10416:4101..42881680789180.5610178-CDS-D-mesarthrocarpus_Contig10416:4101..4288Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10416 4102..4288 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10416.1.1prot_D-mesarthrocarpus_Contig10416.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10416 1017..4288 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10416.1.1

>prot_D-mesarthrocarpus_Contig10416.1.1 ID=prot_D-mesarthrocarpus_Contig10416.1.1|Name=mRNA_D-mesarthrocarpus_Contig10416.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=238bp
MGGPGAGALGALGAGGLGAGGAGAVGLVPPRWVPDEDIIRCTGCRKDFDW
ARRKHHCRSCGQVFCYSCSRFRALMPRSFGTHDPQRLCQPCHSRVVPLQE
ELIGSVSNAMKENDVSRGGLSSYMNRPVAFTLGAEIRKAAYTIHNFTNEG
IIQDRSIPQELLSKAKGLAFLTVIKGGFIVAGRLGTGLVVAKTSSGEWSA
PSAIATVGISWGVLIGGEITDFVLVLNTDSAVEAFLGR
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mRNA from alignment at D-mesarthrocarpus_Contig10416:1017..4288+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10416.1.1 ID=mRNA_D-mesarthrocarpus_Contig10416.1.1|Name=mRNA_D-mesarthrocarpus_Contig10416.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3272bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10416:1017..4288+ (Discosporangium mesarthrocarpum MT17_79)
ATGGGGGGCCCCGGGGCAGGGGCCCTGGGTGCCCTGGGCGCGGGGGGGCT GGGGGCTGGGGGTGCTGGGGCAGTGGGGCTGGTGCCCCCTCGCTGGGTCC CAGATGAGGATATTATTCGGTGCACTGGGTGCAGGAAAGACTTTGACTGG GCAAGGAGAAAGGTGGGGGGAGAGATCTTGTGGGGGGGGGTACTTTGTAT GTGCCGCCTGGTGGGCTCTGTGCCACCCCCCTGCAACATCGGTTTGGCCT TCCTTTTTTTTTTTTTATTGCTTGGGGGTTGTTGGGTTGGTCAAGTCATT GAATGAGTCGTTCAGTAAGTCATTAAATGTGTCATTAAATAGGTCATTAA GTAAGTCAAGGTTGGGAGTGGTTTCGGTACTGCTGAGTGCCAGACTTGGT GATGTGAGCCATCCCATCCATTGCAATAAGTCTCTCTCTCTCTCTCTCTC TCTCTCTCTGTCTTTCTCATGCAATGAAGCCACAGTAGAGGAGGCACGGC CTGTTGGATGTGCCTCCTCCTTGTGTCCTTGAAGTCTTACACTTCAGCTA TGGTATTCGTCGACATGCATTCTTGTTTTTTTTCACCGGCTTGGTTTTTT TTTTGGCCGGATTTTTCCCTTCCAATTATTTGGTTTATTTTTCCCTCCTA CTGTCGTACGTGAAAACACAACGAGAACAACACATGGAACGACTCGGCGT GTAACAACCACTACATGAGACGGCCAACAAAGTGCTCCCAGTGACCAAGT TGACCAAATCAAGAGATGACCCCCTTTTTTTTGTGAATATTGGCTGTTTA ATTCTTGACCGTGCTGCATGTGAAGGTCCTTTTGTTTCCCAACGGAGTCC CCCCCGCTTAGCCCCAGGGTCGAAGATTCCGTGGTCCACGGCCCTGAATA AGGGTCGGTCGTAGTGGAACCCCACGCGACCTGCTGGCCCACAGCGCAAA GGCCTGAAGCTGCACCCCCCCTTGTGCCACCGGCCCCCTCCTTCCTCCCG CGCGCCTTTCCCCCGGCAGCACCATTGCCGGTCATGCGGCCAGGTTTTTT GCTACAGCTGCAGCCGGTTTCGAGCGCTTATGCCCCGATCTTTCGGCACC CACGACCCACAACGCCTGTGCCAGCCTTGCCACTCCCGGGTCGTCCCTCT GCAGGAGGAGCTCATCGGTGAGGGAGCCCCGGCACTGCATGCTTGCTCAA TGTAGTACCGGGTGGCTCAGGCCTCATAGCGTTCGTTTTTTTTTTTTTTT TTTTTTGTTGAGGCGAAGTCGCTTCCGTTTGTTGGAAACTTCCCGTGTTC TGCAGCAAGGGGATTGCAGTGCACGCGCTTCTGGGCTGGTCGACTCGGGC CACTCGGCGGCGGCCCCACCCGTTCGAACCAAGCCTTCCGACTTTCCTCC AAACCCCTGCTGGCTTGATGTTGATAGGAGGGCTGGGCATCGACGGGCGT GTTGTCCGTTGTGCTCGCCCTACCTGCCATCACGAGTCGAGAGAGAAAAA GAGAGAAAGAGAGAGAAAGAAACAAGAGGAAGGGGAGTAATAAGCACCCC TCCCTGTTCCCCCTCATCTTCCGGTTGCAACCACAGGGAGTGTGAGCAAC GCCATGAAGGAAAACGACGTCTCCAGGGGGGGGCTTTCCTCTTACATGAA CCGCCCGGTGGCCTTCACCCTGGGGGCAGAGATCCGGAAGGCTGCGTACA CCATACACAACTTCACCAACGAGTGAGGCCTGGGGGGGTGGGGGGGGGGG TATTGAGGCTTCAGGGTTGGGGTGGGATGGGATGCGGAAAAGGGGGTGGG GTGGGGGTGGGGGTGGGGGTGGGGTTTCTTCTCCACTCCCTCACTTGTCA ACTTTAATTGATTTTCTTTTCTTGTGCACATGTGTGTGTGTGTGTGTCTC TTGTCTGCTCCATGGGGGGCCCAGGTTTGCATCTGAATCAGTATGTCGCT CTGTCCCTCCCTTGGAATTGCTCGCATTATGAACAACCAACAGTCAACGC TTGCCTTGAGGCCACCCCCGCCTACCCACTGGCACACCCATTCTGCCGCA AGAATTCCCTGCAGTGCTTACAAAGGTAATGGAACAGAGTCTCCGCCGTT GTCCAGCAACCCTAGAGCCCATGCCCTCTCCTGGCTGGTCTCGACTCCTG GCCCCCCTTCTTCTATCTTGTGTGCAGGGGGATCATCCAGGACCGCTCCA TCCCTCAGGAGCTGCTGAGCAAAGCGAAAGGACTGGCTTTCTTGACAGTT ATCAAGGGGTAAGAAACGACTTGCCAGAGCAGAATTTTTTACCTTTTCGC CCGCCCCATGAGCCCCACACCCCTGTGATTTATTTGTCCCAACATGACAC GCATTGATTGCACCTTAACTTTCTCTGTGCTGCACTGTACTGTGCTGTAC TGTACTCCGAGGCTCTTCAAGTTGGTTGCAGTCGTAAGGTGTGGTGAACC CACCCTCCTGAAGGATTTTTTTTTTTTGTGCCACTTTTCGTTGCTTGTAT GCTCCCGGAAGTCCTGAGCTGTACCACACGTCACAGCCTTCATTCAGGGG GCTGAAGGAAGGGGCTTGAGACTGGTGTGTAGCCAGTCCAAGAGAGAGTG AGCGTACTCCATGTCTCCTATCACCGTTGCCTCTCTGAACGAGGAAACAG GGGGAGGCATTTCTTGTGGAGTTGGCCATGCCTTCAGTCACACAATATAC TATCCTCTGCCTCTGTCCTTGGCATGCAAGCAAAAATAGCCGGAAAGGTC ATCCTGTGCGCTTCTTTTGTTCTCTCTGCACACACACACACACACACACA CACACACACACACACCGATTTGTGCTGGCTCTCTCTTTGTACCTCTCTCT CTCTGTGGACTTACTCTCTTCCCTTCTGCAAAGTTCCACACACAGGCACC AGCTGATCCTCCAGATCCCCCCCTCCCCCGTCTCACTGGGTGCCTCCAAT CCCTCCCCCCAAGCCCTGCGGCATCATCTCACCGGCCCCTCTCCCTTGTT GCCTGTACGGCCAAATGTTCTGGTTGGGCTCGGCGCACTTTGTGCATTGG GGGCCCGATTGCTTTGATGCTTCTCCTTGGGGCAGCGGCTTCATCGTGGC GGGTAGGTTGGGGACAGGCCTGGTAGTGGCCAAGACATCCTCCGGCGAGT GGTCCGCCCCCTCCGCCATTGCCACTGTTGGCATCAGCTGGGGGGTACTG ATCGGGGGCGAGATCACCGACTTTGTCCTGGTGCTCAACACGGACTCTGC TGTAGAGGCATTCTTAGGTAGG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10416:1017..4288+

>mRNA_D-mesarthrocarpus_Contig10416.1.1 ID=mRNA_D-mesarthrocarpus_Contig10416.1.1|Name=mRNA_D-mesarthrocarpus_Contig10416.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=714bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10416:1017..4288+ (Discosporangium mesarthrocarpum MT17_79)
ATGGGGGGCCCCGGGGCAGGGGCCCTGGGTGCCCTGGGCGCGGGGGGGCT
GGGGGCTGGGGGTGCTGGGGCAGTGGGGCTGGTGCCCCCTCGCTGGGTCC
CAGATGAGGATATTATTCGGTGCACTGGGTGCAGGAAAGACTTTGACTGG
GCAAGGAGAAAGCACCATTGCCGGTCATGCGGCCAGGTTTTTTGCTACAG
CTGCAGCCGGTTTCGAGCGCTTATGCCCCGATCTTTCGGCACCCACGACC
CACAACGCCTGTGCCAGCCTTGCCACTCCCGGGTCGTCCCTCTGCAGGAG
GAGCTCATCGGGAGTGTGAGCAACGCCATGAAGGAAAACGACGTCTCCAG
GGGGGGGCTTTCCTCTTACATGAACCGCCCGGTGGCCTTCACCCTGGGGG
CAGAGATCCGGAAGGCTGCGTACACCATACACAACTTCACCAACGAGGGG
ATCATCCAGGACCGCTCCATCCCTCAGGAGCTGCTGAGCAAAGCGAAAGG
ACTGGCTTTCTTGACAGTTATCAAGGGCGGCTTCATCGTGGCGGGTAGGT
TGGGGACAGGCCTGGTAGTGGCCAAGACATCCTCCGGCGAGTGGTCCGCC
CCCTCCGCCATTGCCACTGTTGGCATCAGCTGGGGGGTACTGATCGGGGG
CGAGATCACCGACTTTGTCCTGGTGCTCAACACGGACTCTGCTGTAGAGG
CATTCTTAGGTAGG
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