mRNA_D-mesarthrocarpus_Contig10407.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10407.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10407.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10407.1.1 vs. uniprot
Match: W4GWE0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GWE0_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 7.360e-20
Identity = 54/138 (39.13%), Postives = 79/138 (57.25%), Query Frame = 1
Query:   43 EVPSVSRTSYRKWAVKSGIPLSSLWRLCKRVGARKHRR*VKPVLSDKQKRDRVGFALSHMHRKGGTGVVVADMYGRVHVDEKWFYAMKNGRGIYLHPDEDAPKPLRAQNKRFITKVMFFASVARPRMISDGL-WFDGQ 453
            ++P   RT++R  A    +  S+L    KR    K+   V+P+L+D  K  RV + + H+H          DM   VHVDEKWF+A K  + +YL P E+ P     ++KR+ITKVMF ++VARPR + D + WFDG+
Sbjct:   37 KIPKTQRTTFRSIAAAMNMSRSTLHAYYKRGIFVKYTSTVRPLLTDANKAVRVQWVMKHLHALSSAQYAFDDMMNTVHVDEKWFFATKISKKMYLAPGEEPPHRT-CKSKRYITKVMFLSAVARPRWVDDEVGWFDGK 173          
BLAST of mRNA_D-mesarthrocarpus_Contig10407.1.1 vs. uniprot
Match: W2NW41_PHYPR (HTH_Tnp_Tc3_2 domain-containing protein n=4 Tax=Phytophthora parasitica TaxID=4792 RepID=W2NW41_PHYPR)

HSP 1 Score: 98.6 bits (244), Expect = 8.850e-20
Identity = 59/142 (41.55%), Postives = 81/142 (57.04%), Query Frame = 1
Query:   10 CGRPSAVTDPW-----EVPSVSRTSYRKWAVKSGIPLSSLWRLCKRVGARKHRR*VKPVLSDKQKRDRVGFALSHMHRKGGTGVVVADMYGRVHVDEKWFYAMKNGRGIYLHPDEDAPKPLRAQNKRFITKVMFFASVARPR 420
            CGR +  TD       ++P   R + +  A   G+  + + RL K    R+H   VKP L+++ +  RV FALSH  RK G  +V ADM+  VH+DEKWF    + +  YL  DE+ P   R Q+KRFI+K MF A+VARPR
Sbjct:   74 CGRKAIDTDELRLQIRKIPLSRRMTIKSLAAALGVSTTVIRRLLKEGAFRRHSSNVKPALTEENRLARVQFALSHTTRKRGGEMVFADMFDVVHIDEKWFNEDTDRKCYYLDADEEEPVRQR-QSKRFISKTMFIAAVARPR 214          
BLAST of mRNA_D-mesarthrocarpus_Contig10407.1.1 vs. uniprot
Match: A0A6A5A6A6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A6A6_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 9.580e-20
Identity = 53/135 (39.26%), Postives = 80/135 (59.26%), Query Frame = 2
Query:  434 GCGLTGKIGIWPIADTVAAMPSSKNRKKGTIMLKPAMVNAERYKELMIDKVIPAIKARMPHDLRAAGWCKSRTRGG----VMEAIQAKAGDS-IMLETQPANTPDLNVNDLGFFHSIQQLKEDVGVFSFEDLVEA 823
            G   +GKIG+WP  + V A  +S+NR KGT++L P  V AE Y+ +++DKV+PAI+A+MP  ++ +     +        V   +  K G S I +  QP N+PD NV DLG+F+SIQ L+      + E+L+ A
Sbjct:  122 GSMFSGKIGVWPFVEQVVAQRNSRNRPKGTVLLVPQAVTAEVYRTMILDKVVPAIQAKMPQRVQGSLIYLQQDNASPHKCVTTQLLLKHGVSGIEVANQPPNSPDFNVLDLGYFNSIQSLQHQKCTRTIEELISA 256          
BLAST of mRNA_D-mesarthrocarpus_Contig10407.1.1 vs. uniprot
Match: A0A485KB92_9STRA (Aste57867_3712 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KB92_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.390e-19
Identity = 56/134 (41.79%), Postives = 74/134 (55.22%), Query Frame = 2
Query:  437 CGLTGKIGIWPIADTVAAMPSSKNRKKGTIMLKPAMVNAERYKELMIDKVIPAIKARMPHDLRAAGWCKSRTRGGVMEAIQAK-----AGDSIMLETQPANTPDLNVNDLGFFHSIQQLKEDVGVFSFEDLVEA 823
            C   GK+GIWP    VAA+ +SKNR KGTI+ KP  V+A  Y + +ID V+PAI A+ P      G        G  +A+  K       + I +  QPAN+PD NV DLGFF++IQ L+      + E LV A
Sbjct:  182 CVFDGKLGIWPFVKHVAAVRNSKNRPKGTIITKPQNVDAHVYFDCVIDNVVPAIVAKFPRACLNQGVYIQHDNAGPHQALTTKLLRSYGVNGISMLNQPANSPDFNVLDLGFFNAIQSLQHQKRTRTIEQLVGA 315          
BLAST of mRNA_D-mesarthrocarpus_Contig10407.1.1 vs. uniprot
Match: A0A6A4Z848_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z848_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 2.120e-19
Identity = 52/134 (38.81%), Postives = 76/134 (56.72%), Query Frame = 2
Query:  437 CGLTGKIGIWPIADTVAAMPSSKNRKKGTIMLKPAMVNAERYKELMIDKVIPAIKARMPHDLRAAGWCKSRTRGG-----VMEAIQAKAGDSIMLETQPANTPDLNVNDLGFFHSIQQLKEDVGVFSFEDLVEA 823
            C   GKIG+WP    V A  +SKNR KGT +L P  VNAE Y+++++D V+PAIKA+MP   +A      +           + +  +    I +  QP N+PD NV DLG+F+SIQ L+      + E+L++A
Sbjct:  235 CHFDGKIGVWPFVKPVEAKRNSKNRPKGTPLLAPESVNAEVYRKMIVDNVVPAIKAKMPRQSQANIIYLQQDNASPHASVTTQRLLERGVTGIGVSNQPPNSPDFNVLDLGYFNSIQSLQSRKCTRTVEELIDA 368          
BLAST of mRNA_D-mesarthrocarpus_Contig10407.1.1 vs. uniprot
Match: A0A485KC85_9STRA (Aste57867_3928 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KC85_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 2.890e-19
Identity = 51/134 (38.06%), Postives = 76/134 (56.72%), Query Frame = 2
Query:  437 CGLTGKIGIWPIADTVAAMPSSKNRKKGTIMLKPAMVNAERYKELMIDKVIPAIKARMPHDLRAAGWCKSRTRGG-----VMEAIQAKAGDSIMLETQPANTPDLNVNDLGFFHSIQQLKEDVGVFSFEDLVEA 823
            C   GKIG+WP  +   A  +SKNR KG+I  KP  V+   YK ++I+KV+PAI+A+ P   +  G    +   G       + ++A     I +  QPAN+PD NV DLGFF++IQ L++     S + L++A
Sbjct:   17 CAFDGKIGMWPFVEQSIAKRTSKNRPKGSIETKPLSVDGVVYKSMIINKVVPAIQAKFPVGNQPNGVFIQQDNAGPHTCVTTKFLRAYGVSGISMTCQPANSPDFNVLDLGFFNAIQNLQQKKPSRSIDQLIDA 150          
BLAST of mRNA_D-mesarthrocarpus_Contig10407.1.1 vs. uniprot
Match: A0A6A4Z7D1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z7D1_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 6.380e-19
Identity = 49/130 (37.69%), Postives = 75/130 (57.69%), Query Frame = 2
Query:  449 GKIGIWPIADTVAAMPSSKNRKKGTIMLKPAMVNAERYKELMIDKVIPAIKARMPHDLRAAGWCKSRTRGG-----VMEAIQAKAGDSIMLETQPANTPDLNVNDLGFFHSIQQLKEDVGVFSFEDLVEA 823
            GKIG+WP  + + A  +SKNR KGTI+  P  V+A+ Y E++++ V+PAIKA+ P      G    +             ++++    I ++ QP N+PD NV DLGFF+SIQ L+      + EDL++A
Sbjct:  246 GKIGVWPFVEKLPAKRNSKNRAKGTIVTTPQSVDAKVYLEMVLNNVVPAIKAKFPRSTLRTGVTIQQDNASPHKCLTTSMLESRGVSGISIKNQPPNSPDFNVLDLGFFNSIQSLQYQKCTRTIEDLIDA 375          
BLAST of mRNA_D-mesarthrocarpus_Contig10407.1.1 vs. uniprot
Match: A0A6A4Z9D8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z9D8_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 6.420e-19
Identity = 49/136 (36.03%), Postives = 80/136 (58.82%), Query Frame = 2
Query:  449 GKIGIWPIADTVAAMPSSKNRKKGTIMLKPAMVNAERYKELMIDKVIPAIKARMPHDLRAAGWCKS-------RTRGGVMEAIQAKAGDSIMLETQPANTPDLNVNDLGFFHSIQQLKEDVGVFSFEDLVEATMET 835
            G+IG+WP   T  A+ SSKNRK+G  + +P  V  + Y+  +IDKVIPA++++ P   +   W +              + A   + G +I L +QPA +PDLNV DLG+F++IQ L+  +  ++ +DLV A +++
Sbjct:  104 GRIGMWPFVKTRPALRSSKNRKRGDDVTEPFTVTRDVYRSFLIDKVIPAVRSKWPSSKKNQIWIQQDNAKPHVSVNDPAVVAAGRQGGWTISLCSQPAQSPDLNVLDLGYFNAIQSLQHQMATYTLDDLVVAVVKS 239          
BLAST of mRNA_D-mesarthrocarpus_Contig10407.1.1 vs. uniprot
Match: UPI000B8EED4A (uncharacterized protein LOC110944677 n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI000B8EED4A)

HSP 1 Score: 95.5 bits (236), Expect = 7.240e-19
Identity = 54/132 (40.91%), Postives = 76/132 (57.58%), Query Frame = 1
Query:   43 EVPSVSRTSYRKWAVKSGIPLSSLWRLCKRVGARKHRR*VKPVLSDKQKRDRVGFALSHMHRKGGTGV-VVADMYGRVHVDEKWFYAMKNGRGIYLHPDEDAPKPLRAQNKRFITKVMFFASVARPRMISDG 435
            ++P   RT+ R  A    +  +++ R  K    + H   +KP L+D+ K+ R+ F LS + R    G  V  DM+  +H+DEKWFY  K  +G YL PDED P     ++K+FITKVMF A+VARPR  S G
Sbjct:   94 QIPLRRRTTIRSLAKAINVSKTTMHRRIKEGALKAHTNAIKPDLTDENKKTRLVFCLSSVTRSLSNGSPVFHDMFNVIHIDEKWFYLSKPSKGYYLVPDEDEPYRT-CKSKKFITKVMFLAAVARPRYDSSG 224          
BLAST of mRNA_D-mesarthrocarpus_Contig10407.1.1 vs. uniprot
Match: A0A485KGK4_9STRA (Aste57867_5319 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KGK4_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 1.020e-18
Identity = 51/134 (38.06%), Postives = 76/134 (56.72%), Query Frame = 2
Query:  437 CGLTGKIGIWPIADTVAAMPSSKNRKKGTIMLKPAMVNAERYKELMIDKVIPAIKARMPHDLRAAGWCKSRTRGG-----VMEAIQAKAGDSIMLETQPANTPDLNVNDLGFFHSIQQLKEDVGVFSFEDLVEA 823
            C   GKIG+WP  +   A  +SKNR KG+I  KP  V+   YK ++I+KV+PAI+A+ P   +  G    +   G       + ++A     I +  QPAN+PD NV DLGFF++IQ L++     S + L++A
Sbjct:  107 CAFDGKIGMWPFVEQSIAKRTSKNRPKGSIETKPLSVDGVVYKSMIINKVVPAIQAKFPVGNQPNGVFIQQDNAGPHTCVTTKFLRAHGVSGISMTCQPANSPDFNVLDLGFFNAIQNLQQKKPSRSIDQLIDA 240          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10407.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
W4GWE0_9STRA7.360e-2039.13Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
W2NW41_PHYPR8.850e-2041.55HTH_Tnp_Tc3_2 domain-containing protein n=4 Tax=Ph... [more]
A0A6A5A6A6_9STRA9.580e-2039.26Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A485KB92_9STRA1.390e-1941.79Aste57867_3712 protein n=1 Tax=Aphanomyces stellat... [more]
A0A6A4Z848_9STRA2.120e-1938.81Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A485KC85_9STRA2.890e-1938.06Aste57867_3928 protein n=1 Tax=Aphanomyces stellat... [more]
A0A6A4Z7D1_9STRA6.380e-1937.69Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A6A4Z9D8_9STRA6.420e-1936.03Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
UPI000B8EED4A7.240e-1940.91uncharacterized protein LOC110944677 n=1 Tax=Helia... [more]
A0A485KGK4_9STRA1.020e-1838.06Aste57867_5319 protein n=2 Tax=Aphanomyces stellat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10407contigD-mesarthrocarpus_Contig10407:3506..4340 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog157072.XP_008866696.1
Model size835
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons1
Evalue9.5e-14
EggNOG OGs2CMKC@1|root,2QQNW@2759|Eukaryota
Cds size345
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789179.5983574-UTR-D-mesarthrocarpus_Contig10407:3505..39951680789179.5983574-UTR-D-mesarthrocarpus_Contig10407:3505..3995Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10407 3506..3995 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789179.6101098-CDS-D-mesarthrocarpus_Contig10407:3995..43401680789179.6101098-CDS-D-mesarthrocarpus_Contig10407:3995..4340Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10407 3996..4340 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10407.1.1prot_D-mesarthrocarpus_Contig10407.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10407 3996..4340 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10407.1.1

>prot_D-mesarthrocarpus_Contig10407.1.1 ID=prot_D-mesarthrocarpus_Contig10407.1.1|Name=mRNA_D-mesarthrocarpus_Contig10407.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=115bp
MPSSKNRKKGTIMLKPAMVNAERYKELMIDKVIPAIKARMPHDLRAAGWC
KSRTRGGVMEAIQAKAGDSIMLETQPANTPDLNVNDLGFFHSIQQLKEDV
GVFSFEDLVEATMET
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mRNA from alignment at D-mesarthrocarpus_Contig10407:3506..4340+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10407.1.1 ID=mRNA_D-mesarthrocarpus_Contig10407.1.1|Name=mRNA_D-mesarthrocarpus_Contig10407.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=835bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10407:3506..4340+ (Discosporangium mesarthrocarpum MT17_79)
CAGTGGCGTTGTGGTCGCCCTAGTGCGGTGACCGACCCGTGGGAGGTACC TTCAGTCAGCCGCACGTCGTACCGCAAATGGGCGGTCAAATCGGGGATCC CCCTCTCCTCGTTGTGGCGCCTGTGCAAGCGGGTGGGAGCGAGGAAGCAC CGACGGTGAGTCAAGCCGGTGCTGTCGGATAAGCAGAAGCGCGATAGGGT GGGTTTTGCGCTGAGCCACATGCACAGGAAGGGAGGAACTGGGGTGGTGG TGGCCGACATGTACGGCAGGGTCCATGTGGATGAGAAGTGGTTCTACGCG ATGAAGAACGGGAGGGGAATCTACCTGCACCCAGACGAGGACGCCCCCAA ACCGCTAAGGGCCCAGAACAAGCGATTCATCACCAAGGTGATGTTCTTTG CTTCTGTGGCAAGACCTAGGATGATCTCCGACGGGCTGTGGTTTGACGGG CAAGATCGGTATCTGGCCCATCGCGGATACTGTGGCGGCAATGCCCAGCA GTAAGAACCGCAAGAAGGGCACTATAATGCTGAAACCAGCCATGGTTAAC GCGGAGAGATACAAGGAACTCATGATCGATAAGGTCATCCCCGCAATCAA GGCGAGAATGCCACATGATCTTCGTGCAGCAGGATGGTGCAAAAGCCGCA CAAGGGGGGGGGTCATGGAGGCAATTCAGGCAAAAGCGGGGGACAGCATC ATGTTGGAAACCCAGCCTGCCAACACACCTGACCTCAACGTGAACGATCT TGGATTCTTCCACTCCATCCAGCAGCTGAAGGAGGATGTGGGAGTGTTTT CTTTTGAGGATCTGGTGGAGGCCACAATGGAGACC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10407:3506..4340+

>mRNA_D-mesarthrocarpus_Contig10407.1.1 ID=mRNA_D-mesarthrocarpus_Contig10407.1.1|Name=mRNA_D-mesarthrocarpus_Contig10407.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=345bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10407:3506..4340+ (Discosporangium mesarthrocarpum MT17_79)
ATGCCCAGCAGTAAGAACCGCAAGAAGGGCACTATAATGCTGAAACCAGC
CATGGTTAACGCGGAGAGATACAAGGAACTCATGATCGATAAGGTCATCC
CCGCAATCAAGGCGAGAATGCCACATGATCTTCGTGCAGCAGGATGGTGC
AAAAGCCGCACAAGGGGGGGGGTCATGGAGGCAATTCAGGCAAAAGCGGG
GGACAGCATCATGTTGGAAACCCAGCCTGCCAACACACCTGACCTCAACG
TGAACGATCTTGGATTCTTCCACTCCATCCAGCAGCTGAAGGAGGATGTG
GGAGTGTTTTCTTTTGAGGATCTGGTGGAGGCCACAATGGAGACC
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