mRNA_D-mesarthrocarpus_Contig10405.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10405.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig10405.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig10405.2.1 vs. uniprot
Match: A0A4Y7PFJ0_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Rickenella mellea TaxID=50990 RepID=A0A4Y7PFJ0_9AGAM)

HSP 1 Score: 59.7 bits (143), Expect = 4.940e-8
Identity = 27/55 (49.09%), Postives = 36/55 (65.45%), Query Frame = 2 
Query:  857 LWGFLDYVRDLKLLQNPVGDLYLVGGLFTNIHTCKHDSQVGESYREIPPSMETYF 1021
            LWG+LD++R+ KLL  PVG  Y+ G LF+N HT  H  QV + +   PPS+  YF
Sbjct:   18 LWGYLDFLRNQKLLLQPVGLYYMCGLLFSNAHTILHRPQVPQYFMCEPPSLNEYF 72
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BLAST of mRNA_D-mesarthrocarpus_Contig10405.2.1 vs. uniprot
Match: UPI00077A7035 (uncharacterized protein LOC107333236 n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A7035)

HSP 1 Score: 61.2 bits (147), Expect = 6.460e-7
Identity = 29/71 (40.85%), Postives = 42/71 (59.15%), Query Frame = 2 
Query:  821 RCGIRIG-KKRANLWGFLDYVRDLKLLQNPVGDLYLVGGLFTNIHTCKHDSQVGESYREIPPSMETYFKLH 1030
            RC +  G  K + L+ FLD+ ++LK+L  P+G  YLV  +  N HTC + SQ G  +   PP++ETY   H
Sbjct:  232 RCCVEWGFGKISQLFAFLDFKKNLKVLLQPIGKYYLVAVILINCHTCLYGSQTGAYFNLDPPTLETYLSNH 302
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BLAST of mRNA_D-mesarthrocarpus_Contig10405.2.1 vs. uniprot
Match: UPI00077A71E6 (uncharacterized protein LOC107340903 n=3 Tax=Acropora TaxID=6127 RepID=UPI00077A71E6)

HSP 1 Score: 61.2 bits (147), Expect = 9.680e-7
Identity = 26/58 (44.83%), Postives = 38/58 (65.52%), Query Frame = 2 
Query:  845 KRANLWGFLDYVRDLKLLQNPVGDLYLVGGLFTNIHTCKHDSQVGESYREIPPSMETY 1018
            K    + FLD+ ++LK+L  PVG +Y+VG +  N HTC + SQ G+ +   PPS+ETY
Sbjct:  331 KIVRYFAFLDFNKNLKVLLQPVGKMYVVGAILANCHTCLYGSQTGDFFDLDPPSLETY 388
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BLAST of mRNA_D-mesarthrocarpus_Contig10405.2.1 vs. uniprot
Match: A0A6G0VRD5_APHCR (Protein ALP1-like (Fragment) n=1 Tax=Aphis craccivora TaxID=307492 RepID=A0A6G0VRD5_APHCR)

HSP 1 Score: 55.8 bits (133), Expect = 4.370e-6
Identity = 23/56 (41.07%), Postives = 35/56 (62.50%), Query Frame = 2 
Query:  860 WGFLDYVRDLKLLQNPVGDLYLVGGLFTNIHTCKHDSQVGESYREIPPSMETYFKL 1027
            + FLD+ ++ KLL   VG +Y VG + TN HTC + SQ G  +  +PP++E Y  +
Sbjct:   74 FAFLDFRKNQKLLLQHVGQMYKVGVILTNCHTCLYGSQTGTYFNIVPPTLEQYLNI 129
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BLAST of mRNA_D-mesarthrocarpus_Contig10405.2.1 vs. uniprot
Match: A0A074S1B6_9AGAM (DDE family endonuclease n=2 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A074S1B6_9AGAM)

HSP 1 Score: 59.3 bits (142), Expect = 4.380e-6
Identity = 27/62 (43.55%), Postives = 39/62 (62.90%), Query Frame = 2 
Query:  854 NLWGFLDYVRDLKLLQNPVGDLYLVGGLFTNIHTCKHDSQVGESYREIPPSMETYFKLHGHS 1039
            N++GF+DY + LKL   PVG LYL+  LFTNIHT  + S+V   ++  PPS+  +     H+
Sbjct:  355 NIFGFVDYNKGLKLGLQPVGQLYLLSVLFTNIHTILYGSEVSHKFQCPPPSLSHFLTPRKHA 416
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BLAST of mRNA_D-mesarthrocarpus_Contig10405.2.1 vs. uniprot
Match: J9L3S5_ACYPI (DDE Tnp4 domain-containing protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=J9L3S5_ACYPI)

HSP 1 Score: 55.1 bits (131), Expect = 7.050e-5
Identity = 23/56 (41.07%), Postives = 35/56 (62.50%), Query Frame = 2 
Query:  860 WGFLDYVRDLKLLQNPVGDLYLVGGLFTNIHTCKHDSQVGESYREIPPSMETYFKL 1027
            + FLD+ ++ KLL   VG +Y VG + TN HTC + SQ G  +  +PP++E Y  +
Sbjct:  249 FAFLDFRKNQKLLLQHVGQMYKVGVILTNCHTCLYGSQSGTYFNIVPPTLEQYLNI 304
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10405.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A4Y7PFJ0_9AGAM4.940e-849.09Uncharacterized protein (Fragment) n=1 Tax=Rickene... [more]
UPI00077A70356.460e-740.85uncharacterized protein LOC107333236 n=1 Tax=Acrop... [more]
UPI00077A71E69.680e-744.83uncharacterized protein LOC107340903 n=3 Tax=Acrop... [more]
A0A6G0VRD5_APHCR4.370e-641.07Protein ALP1-like (Fragment) n=1 Tax=Aphis cracciv... [more]
A0A074S1B6_9AGAM4.380e-643.55DDE family endonuclease n=2 Tax=Rhizoctonia solani... [more]
J9L3S5_ACYPI7.050e-541.07DDE Tnp4 domain-containing protein n=1 Tax=Acyrtho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10405contigD-mesarthrocarpus_Contig10405:1646..2722 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog7029.ACYPI34512-PA
PFAMsDDE_Tnp_4
Model size1077
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.08e-07
EggNOG OGsKOG4585@1|root,KOG4585@2759|Eukaryota
Descriptionnuclease activity
Cds size375
COG categoryB
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789179.5420039-UTR-D-mesarthrocarpus_Contig10405:1645..16741680789179.5420039-UTR-D-mesarthrocarpus_Contig10405:1645..1674Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10405 1646..1674 -
1680789179.5637097-UTR-D-mesarthrocarpus_Contig10405:2049..27221680789179.5637097-UTR-D-mesarthrocarpus_Contig10405:2049..2722Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10405 2050..2722 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789179.5529575-CDS-D-mesarthrocarpus_Contig10405:1674..20491680789179.5529575-CDS-D-mesarthrocarpus_Contig10405:1674..2049Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10405 1675..2049 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10405.2.1prot_D-mesarthrocarpus_Contig10405.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10405 1675..2049 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10405.2.1

>prot_D-mesarthrocarpus_Contig10405.2.1 ID=prot_D-mesarthrocarpus_Contig10405.2.1|Name=mRNA_D-mesarthrocarpus_Contig10405.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=125bp
MHIGEALVILLLRPRFLSHLDNIRGIQELGSWTQVGPNCGKGKHGCVLGR
CGIRIGKKRANLWGFLDYVRDLKLLQNPVGDLYLVGGLFTNIHTCKHDSQ
VGESYREIPPSMETYFKLHGHSSD*
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mRNA from alignment at D-mesarthrocarpus_Contig10405:1646..2722-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10405.2.1 ID=mRNA_D-mesarthrocarpus_Contig10405.2.1|Name=mRNA_D-mesarthrocarpus_Contig10405.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1077bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10405:1646..2722- (Discosporangium mesarthrocarpum MT17_79)
CATGTTTGCAGACGCAACCTGGGATACGACATAGAGTCGACAACAATGCC
TGGAGCTTCAGTGGTTCAACAGACCGAGCTCCCTTCTACCACTGGAGGTA
CAACCCCGTTTGGTCCTGAGGAGAAGGAGGCCTTCATCGAACGGGTGCAA
CAACCTCTACTGTTTTTAGATCTGTGTGCCTAGCGCAGGCTGAAGAAGAC
CAAGAGAATGGGGGGGATGTCTCAGGCCCTAGTGGCGGCAACGGTGGAGC
AGGCGCAGGGTATCCTTACCCATAGGTATGCTATCCAGGATCTGCATCTA
TGAAGCCGAGCGGTGGGAAATGTGCCTGAGAAAGGGTTGAAGAAGGAGGT
CTGCATCCATGTTGGACCTAAGCTCCTCACACTTGCGGATATGAAGAGGA
GAAACGATGAAGAGTGGTCGGAACTCCTGGACAGGTCGTCAGATGATGAG
GAGGATGGCATGGCAGAAGATCTTGAGGCCGTAAGGTCAGACAGGGGCGC
GCGTGACATGGGAACCCTTCTTCTATTTTACGTTTTAGGGACCGTAGCTC
CACAACAGGTAGCGAGAAGGAAAGTCACTGAGTTTCTCCCATGTCTCTCT
CACTTCTTGGAGGAAGAGTGTTGGAGTCTGTTCTAGGCATCCTGGAGTAT
TTTGTCACAGAGAACTGCATACAATGCACATCGGAGAAGCACTCGTCATT
TTGCTGTTGAGACCGAGGTTTTTAAGTCACCTAGACAACATACGAGGGAT
TCAAGAACTCGGCAGCTGGACTCAGGTAGGCCCAAACTGTGGAAAGGGAA
AACATGGGTGTGTGCTGGGTAGGTGTGGAATACGCATTGGGAAAAAGCGT
GCAAACCTCTGGGGATTCTTAGATTACGTAAGGGATTTGAAACTGTTGCA
GAACCCAGTAGGGGATCTTTACTTGGTGGGAGGACTCTTCACAAACATAC
ACACTTGCAAGCATGATAGTCAAGTAGGGGAGTCCTACCGTGAGATCCCT
CCCTCCATGGAAACCTACTTTAAGCTACACGGTCATAGCTCAGACTGAAT
TTTGGTATGCACATAATAACAAATGAC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10405:1646..2722-

>mRNA_D-mesarthrocarpus_Contig10405.2.1 ID=mRNA_D-mesarthrocarpus_Contig10405.2.1|Name=mRNA_D-mesarthrocarpus_Contig10405.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=375bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10405:1646..2722- (Discosporangium mesarthrocarpum MT17_79)
ATGCACATCGGAGAAGCACTCGTCATTTTGCTGTTGAGACCGAGGTTTTT
AAGTCACCTAGACAACATACGAGGGATTCAAGAACTCGGCAGCTGGACTC
AGGTAGGCCCAAACTGTGGAAAGGGAAAACATGGGTGTGTGCTGGGTAGG
TGTGGAATACGCATTGGGAAAAAGCGTGCAAACCTCTGGGGATTCTTAGA
TTACGTAAGGGATTTGAAACTGTTGCAGAACCCAGTAGGGGATCTTTACT
TGGTGGGAGGACTCTTCACAAACATACACACTTGCAAGCATGATAGTCAA
GTAGGGGAGTCCTACCGTGAGATCCCTCCCTCCATGGAAACCTACTTTAA
GCTACACGGTCATAGCTCAGACTGA
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