mRNA_D-mesarthrocarpus_Contig10404.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10404.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig10404.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10404.2.1 vs. uniprot
Match: A0A7S3XK88_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XK88_HETAK)

HSP 1 Score: 72.0 bits (175), Expect = 7.530e-14
Identity = 41/95 (43.16%), Postives = 58/95 (61.05%), Query Frame = 1
Query:   13 LSSLHEAKRSDQRGIGKHDHQTAVKYGKRTS-----DGEWE-RWKYTFKNIVYITDESSTPEVTSWG*AHLNFSLKLTPGQVNDHEEARQRILLD 279
            + SLH A+R  QRGI   + Q AVKYG +       +G+ + R+KYTF ++VYITD+SST E+TSW        + LT      H+EAR+R+ L+
Sbjct:   11 IPSLHGAERRLQRGISPDELQNAVKYGTKEKLVVRQNGKVQVRYKYTFADVVYITDKSSTREITSWAKPMPFLEMSLTSRMQEQHDEARRRLALN 105          
BLAST of mRNA_D-mesarthrocarpus_Contig10404.2.1 vs. uniprot
Match: D8LBU5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBU5_ECTSI)

HSP 1 Score: 74.7 bits (182), Expect = 1.230e-13
Identity = 43/98 (43.88%), Postives = 58/98 (59.18%), Query Frame = 1
Query:   13 LSSLHEAKRSDQRGIGKHDHQTAVKYGK-----RTSDGEWERWKYTFKNIVYITDESSTPEVTSW----G*AHLNFSLKLTPGQVNDHEEARQRILLD 279
             SSLH  +R  +R I + D Q AV+YGK     R  +    RWKYT+ +I+YITDE+ST E+TSW    G  H   +LK    Q+ +HE A+QR+  D
Sbjct:   20 FSSLHGERRRAERQIDRRDLQAAVRYGKKQLAKRDPETGAIRWKYTYADIIYITDETSTQEITSWVAPIGIPHAELTLK----QIGEHEAAKQRLKND 113          
BLAST of mRNA_D-mesarthrocarpus_Contig10404.2.1 vs. uniprot
Match: D8LBT5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBT5_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 1.700e-13
Identity = 43/94 (45.74%), Postives = 55/94 (58.51%), Query Frame = 1
Query:   13 LSSLHEAKRSDQRGIGKHDHQTAVKYGKRTSDGEWE-----RWKYTFKNIVYITDESSTPEVTSWG*AHLNFSLKLTPGQVNDHEEARQRILLD 279
             SSLH  +R   RGI + D Q+AVKYGK+ +    +     RWKYT  NIVYITDE+ST E+T +   +      LTP  V DHE A+ R+  D
Sbjct:   21 FSSLHGRERRALRGITRIDLQSAVKYGKKDTPSPNQATGARRWKYTHANIVYITDETSTLEITCYVKPNYVPRANLTPDHVRDHETAKNRLKTD 114          
BLAST of mRNA_D-mesarthrocarpus_Contig10404.2.1 vs. uniprot
Match: A0A482S399_9ARCH (VWFA domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S399_9ARCH)

HSP 1 Score: 69.3 bits (168), Expect = 9.600e-12
Identity = 45/99 (45.45%), Postives = 56/99 (56.57%), Query Frame = 1
Query:    1 RDKVLSSLHEAKRSDQRGIGKHDHQTAVKYGKRTSDGEWE-----RWKYTFKNIVYITDESSTPEVTSWG*AHLNFSLKLTP-GQVNDHEEARQRILLD 279
            R ++ S+LH  +R  QR I K D Q AVKYG R            RWKYT+ +IVYIT+E+S  EVTSW    L  S K+ P   +N H EA  R+ LD
Sbjct:    8 RIELQSTLHGEERRFQRDISKRDLQAAVKYGTRERGFPCPQTGRPRWKYTYADIVYITNETSKVEVTSWT-LELPLSRKIIPQNYLNRHAEAANRVHLD 105          
BLAST of mRNA_D-mesarthrocarpus_Contig10404.2.1 vs. uniprot
Match: C1FHM0_MICCC (Alpha-type protein kinase domain-containing protein n=2 Tax=Micromonas TaxID=38832 RepID=C1FHM0_MICCC)

HSP 1 Score: 69.3 bits (168), Expect = 9.690e-12
Identity = 42/94 (44.68%), Postives = 53/94 (56.38%), Query Frame = 1
Query:   10 VLSSLHEAKRSDQRGIGKHDHQTAVKYGKR----TSDGEWERWKYTFKNIVYITDESSTPEVTSWG*AHLNFSLKL---TPGQVNDHEEARQRI 270
            VLSS H  +R  +R I K D Q AVKYG+R    T  GE  RW YTF+ IVYITDE+S  E+TSW      F + L   T   +  H  A++ +
Sbjct:   12 VLSSAHGRQRRSERLISKRDLQAAVKYGERAPSYTDKGEL-RWMYTFRGIVYITDETSRHEITSWPLPAFGFDVPLVDITQPMLRAHRAAKRAL 104          
BLAST of mRNA_D-mesarthrocarpus_Contig10404.2.1 vs. uniprot
Match: D8LPS5_ECTSI (Alpha-type protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPS5_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 2.470e-11
Identity = 39/94 (41.49%), Postives = 52/94 (55.32%), Query Frame = 1
Query:   13 LSSLHEAKRSDQRGIGKHDHQTAVKYGKRTSDGE-----WERWKYTFKNIVYITDESSTPEVTSWG*AHLNFSLKLTPGQVNDHEEARQRILLD 279
             SSLH  +R   RGI + D Q+AVKYG++            RW+YT  NIVYITDE+ST E+T +   +      LT   + DHE A+ R+  D
Sbjct:   17 FSSLHGRERRALRGIARIDLQSAVKYGEKQQAAPDRATGARRWRYTHANIVYITDETSTKEITCYAKPNSLPRANLTLEHIRDHEAAKSRLKAD 110          
BLAST of mRNA_D-mesarthrocarpus_Contig10404.2.1 vs. uniprot
Match: A0A813E0A9_POLGL (Hypothetical protein n=4 Tax=Polarella glacialis TaxID=89957 RepID=A0A813E0A9_POLGL)

HSP 1 Score: 65.5 bits (158), Expect = 2.180e-10
Identity = 38/92 (41.30%), Postives = 51/92 (55.43%), Query Frame = 1
Query:   10 VLSSLHEAKRSDQRGIGKHDHQTAVKYGKRTSD------GEWERWKYTFKNIVYITDESSTPEVTSWG*AHLNFSLK---LTPGQVNDHEEA 258
            VLSS H  +R  +R IGK D Q A+KYG R         GE  RW+YTF ++VY+TDE    E+TSW        ++   +TP    +H+EA
Sbjct:   21 VLSSAHGRQRRLERNIGKRDLQAAIKYGTREPGHPCPRTGE-RRWRYTFADVVYVTDEEGRKEITSWPAPGCGIDVEKVLITPEMRANHKEA 111          
BLAST of mRNA_D-mesarthrocarpus_Contig10404.2.1 vs. uniprot
Match: A0A6A5AFC6_9STRA (VWFA domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AFC6_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 7.280e-10
Identity = 36/89 (40.45%), Postives = 51/89 (57.30%), Query Frame = 1
Query:   10 VLSSLHEAKRSDQRGIGKHDHQTAVKYGKRTSDGEWERWKYTFKNIVYITDESSTPEVTSWG*AHLNFSLKLTPGQVNDHEEARQRILL 276
            +LS +H   R  QR I K D Q A+KYG + +  + +RWKYTF NIVYITD++S  E+TS+        + L    +  HEE +  + L
Sbjct:   13 LLSCVHGRDRRSQRAIAKRDLQAAIKYGTKEASIK-DRWKYTFANIVYITDKTSRREITSFVQRVKVSKVTLEADALVQHEELKASLQL 100          
BLAST of mRNA_D-mesarthrocarpus_Contig10404.2.1 vs. uniprot
Match: A0A836B203_CHLIN (Alpha-type protein kinase domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A836B203_CHLIN)

HSP 1 Score: 63.9 bits (154), Expect = 7.630e-10
Identity = 33/66 (50.00%), Postives = 44/66 (66.67%), Query Frame = 1
Query:   10 VLSSLHEAKRSDQRGIGKHDHQTAVKYGKRTS-----DGEWERWKYTFKNIVYITDESSTPEVTSW 192
            ++S  H  +R +QRGI + + Q AVKYG+R       DG+  RW+YT K +VYITDESS  E+TSW
Sbjct:   81 LISHTHGRERREQRGIERRELQEAVKYGRREQANPGRDGQL-RWRYTHKGVVYITDESSRHEITSW 145          
BLAST of mRNA_D-mesarthrocarpus_Contig10404.2.1 vs. uniprot
Match: A0A7S2JXC6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JXC6_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 8.920e-10
Identity = 36/90 (40.00%), Postives = 49/90 (54.44%), Query Frame = 1
Query:   10 VLSSLHEAKRSDQRGIGKHDHQTAVKYGKRTSDGE----WERWKYTFKNIVYITDESSTPEVTSWG*AHLNFSLK---LTPGQVNDHEEA 258
            VLSS H  +R  +R I K D Q A+KYG++ +          WKYTF   VYITD +ST E+TSW        L+   +T   + +H+EA
Sbjct:   10 VLSSTHGRQRRMERNIAKRDLQAAIKYGEKEATRSPMTGKRGWKYTFAGNVYITDRTSTREITSWPEPCFGMDLEKVTITSEMMQEHKEA 99          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10404.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3XK88_HETAK7.530e-1443.16Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
D8LBU5_ECTSI1.230e-1343.88Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LBT5_ECTSI1.700e-1345.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A482S399_9ARCH9.600e-1245.45VWFA domain-containing protein n=1 Tax=archaeon Ta... [more]
C1FHM0_MICCC9.690e-1244.68Alpha-type protein kinase domain-containing protei... [more]
D8LPS5_ECTSI2.470e-1141.49Alpha-type protein kinase domain-containing protei... [more]
A0A813E0A9_POLGL2.180e-1041.30Hypothetical protein n=4 Tax=Polarella glacialis T... [more]
A0A6A5AFC6_9STRA7.280e-1040.45VWFA domain-containing protein (Fragment) n=1 Tax=... [more]
A0A836B203_CHLIN7.630e-1050.00Alpha-type protein kinase domain-containing protei... [more]
A0A7S2JXC6_9STRA8.920e-1040.00Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10404contigD-mesarthrocarpus_Contig10404:3857..4135 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog296587.XP_002508866.1
PFAMsAlpha_kinase,VWA_2
Model size279
Max annot lvl3041|Chlorophyta
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.55e-12
EggNOG OGs2CV6W@1|root,2RRF0@2759|Eukaryota,37Z6I@33090|Viridiplantae,34KBI@3041|Chlorophyta
DescriptionAlpha-kinase family
Cds size198
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789179.4920902-CDS-D-mesarthrocarpus_Contig10404:3856..40541680789179.4920902-CDS-D-mesarthrocarpus_Contig10404:3856..4054Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10404 3857..4054 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789179.5079885-UTR-D-mesarthrocarpus_Contig10404:4054..41351680789179.5079885-UTR-D-mesarthrocarpus_Contig10404:4054..4135Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10404 4055..4135 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10404.2.1prot_D-mesarthrocarpus_Contig10404.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10404 3857..4054 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10404.2.1

>prot_D-mesarthrocarpus_Contig10404.2.1 ID=prot_D-mesarthrocarpus_Contig10404.2.1|Name=mRNA_D-mesarthrocarpus_Contig10404.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=66bp
RDKVLSSLHEAKRSDQRGIGKHDHQTAVKYGKRTSDGEWERWKYTFKNIV
YITDESSTPEVTSWG*
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mRNA from alignment at D-mesarthrocarpus_Contig10404:3857..4135+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10404.2.1 ID=mRNA_D-mesarthrocarpus_Contig10404.2.1|Name=mRNA_D-mesarthrocarpus_Contig10404.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=279bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10404:3857..4135+ (Discosporangium mesarthrocarpum MT17_79)
CGAGATAAGGTTTTGTCGAGCCTTCATGAGGCAAAACGAAGTGATCAGCG GGGTATCGGTAAGCATGACCATCAGACGGCAGTGAAGTACGGCAAGAGGA CAAGTGATGGTGAGTGGGAAAGGTGGAAGTACACCTTCAAGAACATCGTG TATATCACTGACGAATCATCTACGCCAGAGGTCACGTCCTGGGGTTGAGC CCATCTCAATTTCTCGCTCAAACTGACTCCAGGCCAAGTCAATGACCATG AGGAAGCACGACAGAGGATTCTGTTGGAC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10404:3857..4135+

>mRNA_D-mesarthrocarpus_Contig10404.2.1 ID=mRNA_D-mesarthrocarpus_Contig10404.2.1|Name=mRNA_D-mesarthrocarpus_Contig10404.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=198bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10404:3857..4135+ (Discosporangium mesarthrocarpum MT17_79)
CGAGATAAGGTTTTGTCGAGCCTTCATGAGGCAAAACGAAGTGATCAGCG
GGGTATCGGTAAGCATGACCATCAGACGGCAGTGAAGTACGGCAAGAGGA
CAAGTGATGGTGAGTGGGAAAGGTGGAAGTACACCTTCAAGAACATCGTG
TATATCACTGACGAATCATCTACGCCAGAGGTCACGTCCTGGGGTTGA
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