mRNA_D-mesarthrocarpus_Contig10404.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10404.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10404.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10404.1.1 vs. uniprot
Match: D7FZ88_ECTSI (Aurora kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ88_ECTSI)

HSP 1 Score: 334 bits (857), Expect = 1.270e-102
Identity = 177/285 (62.11%), Postives = 202/285 (70.88%), Query Frame = 1
Query:   16 IDDYDLGQELGHGGFAVVYRARVRSTGREVALKVIDKVKAM----------------------LPGGDPSLTSRIATEVRVHWGLKHPAVVELIDFFEDARFVYMALELCGGGDLYRHLK--------TRGPFSEPEAAGFMRQILAGLTYLHSRGILHRDLKLSNLLLSQDGRRLRISDFGLAVMLRDGQEERHTICGTPNYMAPEVQDE------------GYGLSADLWSAGCLVYVMVTGRAPFQGQRVGDTLSNVRSGAYTVPDGLSPCASDFMECMLQL 744
            IDD+D+GQELG GGFAVVYRARVRSTG EVALKV+DK +A                       L GG     +R+A EVR+HWGL+HPAVVEL++FFED RFVY+ LELCGGGDLYR L+        + GP  E EAAG+M Q+LAGL YLH  GI+HRDLKLSNLLLS+DGRRLRI+DFGLAV L     ERHT+CGTPN MAPEVQ              GYGLSADLWSAGCL+Y M+TGRAPFQG+RVGDTL+N RSG Y VP+GLS  A DF+  ML L
Sbjct:   20 IDDFDVGQELGKGGFAVVYRARVRSTGLEVALKVVDKHRAAEHLRGTATXXXXXXXXXXXXXGLGGGLELACARVANEVRLHWGLRHPAVVELLEFFEDERFVYLVLELCGGGDLYRRLRGAGGSSSGSSGPLDEREAAGYMGQLLAGLQYLHESGIMHRDLKLSNLLLSEDGRRLRIADFGLAVKLEAEDSERHTLCGTPNTMAPEVQGPVYGASAAGQQPGGYGLSADLWSAGCLLYTMLTGRAPFQGRRVGDTLANARSGRYAVPEGLSDIARDFLASMLSL 304          
BLAST of mRNA_D-mesarthrocarpus_Contig10404.1.1 vs. uniprot
Match: A0A6H5L179_9PHAE (Aurora kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L179_9PHAE)

HSP 1 Score: 335 bits (859), Expect = 2.790e-102
Identity = 176/284 (61.97%), Postives = 203/284 (71.48%), Query Frame = 1
Query:   16 IDDYDLGQELGHGGFAVVYRARVRSTGREVALKVIDKVKAM--------------------LPGGDPSLTSRIATEVRVHWGLKHPAVVELIDFFEDARFVYMALELCGGGDLYRHLK---------TRGPFSEPEAAGFMRQILAGLTYLHSRGILHRDLKLSNLLLSQDGRRLRISDFGLAVMLRDGQEERHTICGTPNYMAPEVQDE------------GYGLSADLWSAGCLVYVMVTGRAPFQGQRVGDTLSNVRSGAYTVPDGLSPCASDFMECMLQL 744
            IDD+D+GQELG GGFAVVYRARVRSTG EVALKV+DK +A                     L GG     +R+A EVR+HWGL+HPAVVEL++FFED RFVY+ LELCGGGD+YR L+         +RGP  E EAAG+M Q+LAGL YLH  GI+HRDLKLSNLLLS+DGRRLRI+DFGLAV L     ERHT+CGTPN MAPEVQ              GYGL+ADLWSAGCL+Y M+TGRAPFQG+RVGDTL+N RSG Y VP+GLS  A DF+  ML L
Sbjct:   19 IDDFDVGQELGKGGFAVVYRARVRSTGLEVALKVVDKHRAAEHLRGTATSAGGGGGDREGGLGGGLELACARVANEVRLHWGLRHPAVVELLEFFEDERFVYLVLELCGGGDMYRRLRGAGSSGSSGSRGPLDEREAAGYMGQLLAGLQYLHESGIMHRDLKLSNLLLSEDGRRLRIADFGLAVKLEAEDSERHTLCGTPNTMAPEVQGPVYGASAAGQQPGGYGLAADLWSAGCLLYTMLTGRAPFQGRRVGDTLANARSGRYAVPEGLSDTARDFLASMLSL 302          
BLAST of mRNA_D-mesarthrocarpus_Contig10404.1.1 vs. uniprot
Match: A0A4P9W4A5_9FUNG (Kinase-like domain-containing protein (Fragment) n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9W4A5_9FUNG)

HSP 1 Score: 234 bits (598), Expect = 5.340e-74
Identity = 123/248 (49.60%), Postives = 171/248 (68.95%), Query Frame = 1
Query:   22 DYDLGQELGHGGFAVVYRA--RVRST-GREVALKVIDK--VKAMLPGGDPSLTSRIATEVRVHWGLKHPAVVELIDFFEDARFVYMALELCGGGDLYRHLKTRG--PFSEPEAAGFMRQILAGLTYLHSRGILHRDLKLSNLLLSQDGRRLRISDFGLAVMLRDGQEERHTICGTPNYMAPE-VQDEGYGLSADLWSAGCLVYVMVTGRAPFQGQRVGDTLSNVRSGAYTVPDGLSPCASDFMECMLQ 741
            DY++G+ +G GGF  V+RA  + + T GREVA+K+IDK  +KA        +T R+A EV +HW L HP+++EL  +FED  +VY+  ELCG G+LYR+++ R   P SE EA G +  ++ GL YLH+ GI+HRDLKLSNLLL+ D   L+I+DFGLAV L D   E+ T+CGTPNY++PE V  + YGL++D+WS GC+V  ++TG+ PF+ Q V  TL  V  G Y +PD LSP A D ++ +LQ
Sbjct:    1 DYEVGEMIGRGGFGFVHRAVSKAKGTPGREVAIKMIDKRLMKAS------KMTRRVANEVEIHWQLHHPSILELHTYFEDDAYVYLVTELCGNGELYRYVQNRASCPLSENEARGILVMLIRGLLYLHANGIIHRDLKLSNLLLT-DSFDLKIADFGLAVKLADPDSEQKTMCGTPNYISPEIVSRQPYGLASDVWSLGCMVVTLLTGKPPFESQAVKMTLDKVSRGEYMLPDSLSPVAKDLIQKLLQ 241          
BLAST of mRNA_D-mesarthrocarpus_Contig10404.1.1 vs. uniprot
Match: V4B415_LOTGI (Protein kinase domain-containing protein (Fragment) n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4B415_LOTGI)

HSP 1 Score: 218 bits (555), Expect = 1.330e-67
Identity = 115/244 (47.13%), Postives = 160/244 (65.57%), Query Frame = 1
Query:   16 IDDYDLGQELGHGGFAVVYRARVRSTGREVALKVIDKVKAMLPGGDPSLTSRIATEVRVHWGLKHPAVVELIDFFEDARFVYMALELCGGGDLYRHLKTRGPF-SEPEAAGFMRQILAGLTYLHSRGILHRDLKLSNLLLSQDGRRLRISDFGLAVMLRDGQEERHTICGTPNYMAPEVQDEG-YGLSADLWSAGCLVYVMVTGRAPFQGQRVGDTLSNVRSGAYTVPDGLSPCASDFMECMLQ 741
              +Y +  +LG+GGFA VYR     TG+ VA+K+IDK K M   G   +T R+  EV +H  LKH +++EL  +FEDA +VY+ LE+C  G+LY++L+  G   SE +A  F+ QI+ GL YLHS GILHRDLKLSN+L++ D + L+I+DFGLA  L    E+R+T+CGTPNY++PEV     +GL AD+WS GC++Y  + G+ PF    +  TL+ V S  Y VP  LS  A D +  +LQ
Sbjct:    1 FQNYQIFNQLGNGGFANVYRGLANKTGQPVAIKLIDK-KIMKEKG---MTERVKKEVEIHSRLKHSSILELYSYFEDADYVYLVLEICENGELYKYLQNNGKILSEEKAKDFLYQIVQGLLYLHSHGILHRDLKLSNILITSDNK-LKIADFGLATQLSIAGEKRYTMCGTPNYISPEVVTRSAHGLEADVWSLGCMLYTFLVGKPPFDTNTITHTLNKVVSAEYKVPKHLSLKARDLIRLLLQ 239          
BLAST of mRNA_D-mesarthrocarpus_Contig10404.1.1 vs. uniprot
Match: A0A2C9JP73_BIOGL (Serine/threonine-protein kinase PLK4 n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9JP73_BIOGL)

HSP 1 Score: 226 bits (577), Expect = 1.400e-67
Identity = 119/241 (49.38%), Postives = 162/241 (67.22%), Query Frame = 1
Query:   22 DYDLGQELGHGGFAVVYRARVRSTGREVALKVIDKVKAMLPGGDPSLTSRIATEVRVHWGLKHPAVVELIDFFEDARFVYMALELCGGGDLYRHLKTRG-PFSEPEAAGFMRQILAGLTYLHSRGILHRDLKLSNLLLSQDGRRLRISDFGLAVMLRDGQEERHTICGTPNYMAPEV-QDEGYGLSADLWSAGCLVYVMVTGRAPFQGQRVGDTLSNVRSGAYTVPDGLSPCASDFMECML 738
            DY +   LG GGFA VYRAR   TG+EVA+K+IDK +    G    ++ R+  EV +H  LKHP+V+EL +FFEDA +VY+ LELC  G+L R+L++   PF+E EA   MRQI+ G+ YLHS GILHRDL LSNLLL+++   ++I+DFGLA  L   +E+  T+CGTPNY++PE+     +GL AD+WS GC++Y  + GR PF    V  TL+ V S  Y +P  LSP A D ++ +L
Sbjct:    9 DYQVLNLLGTGGFANVYRARSNLTGKEVAIKMIDKKRMKASG----MSGRVKKEVEIHSRLKHPSVLELYNFFEDANYVYLVLELCHNGELQRYLQSLSQPFTEEEARRLMRQIVEGILYLHSHGILHRDLSLSNLLLNKE-MNVKIADFGLATQLEGPEEKHFTMCGTPNYISPEIAMRSAHGLEADVWSLGCMLYTFLVGRPPFDTDAVKSTLNRVISAEYRLPSHLSPEAKDLIQGLL 244          
BLAST of mRNA_D-mesarthrocarpus_Contig10404.1.1 vs. uniprot
Match: T1G479_HELRO (Protein kinase domain-containing protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1G479_HELRO)

HSP 1 Score: 217 bits (553), Expect = 2.670e-67
Identity = 109/245 (44.49%), Postives = 162/245 (66.12%), Query Frame = 1
Query:   16 IDDYDLGQELGHGGFAVVYRARVRSTGREVALKVIDKVKAMLPGGDPSLTSRIATEVRVHWGLKHPAVVELIDFFEDARFVYMALELCGGGDLYRHLKTRG-PFSEPEAAGFMRQILAGLTYLHSRGILHRDLKLSNLLLSQDGRRLRISDFGLAVMLRDGQEERHTICGTPNYMAPEVQDE-GYGLSADLWSAGCLVYVMVTGRAPFQGQRVGDTLSNVRSGAYTVPDGLSPCASDFMECMLQL 744
            + +Y++   +GHGGF  VY+A  R TG++VA+K I+K K     G   +  R+  EV +H  LKHP+++E+ ++FEDA ++Y+ LELC  GDL   LKT    F E E   +M+QI+ G+ YL    ILHRDL LSN+L+S+ G  ++I+DFGLA  L+D  E+  T+CGTPNY++PEV     +GL +D+WS GC+ Y M+TG+ PF G+ V +TL  ++SG Y +PD +S  A   ++ +LQ+
Sbjct:    1 LQNYNVQYSIGHGGFGNVYKAEHRFTGQKVAIKFIEKKKIQNHSG---MMKRVLQEVAIHSRLKHPSILEVYNYFEDAHYIYLILELCPHGDLNSKLKTLSCGFPEHEVRSYMQQIVDGIVYLQKHRILHRDLTLSNILISRHGT-VKIADFGLATQLQDVNEKHFTMCGTPNYISPEVASRTSHGLESDVWSVGCMFYAMLTGKPPFDGEGVKETLERIKSGEYCMPDHVSSHAKHLIKSLLQM 241          
BLAST of mRNA_D-mesarthrocarpus_Contig10404.1.1 vs. uniprot
Match: M4SZK9_9BILA (Polo-like kinase 4 (Fragment) n=2 Tax=Brachionus TaxID=10194 RepID=M4SZK9_9BILA)

HSP 1 Score: 218 bits (556), Expect = 5.220e-67
Identity = 111/246 (45.12%), Postives = 169/246 (68.70%), Query Frame = 1
Query:   13 SIDDYDLGQELGHGGFAVVYRARVRSTGREVALKVIDKVKAMLPGGDPSLTSRIATEVRVHWGLKHPAVVELIDFFEDARFVYMALELCGGGDLYRHLKTRGP--FSEPEAAGFMRQILAGLTYLHSRGILHRDLKLSNLLLSQDGRRLRISDFGLAVMLRDGQEERHTICGTPNYMAPEVQDEG-YGLSADLWSAGCLVYVMVTGRAPFQGQRVGDTLSNVRSGAYTVPDGLSPCASDFMECMLQ 741
            SI DY++ ++LG GGFA VYRA+V+++G+EVA+K+IDK K M       +T R+  EV++H+ LKHP+++EL  FFED  +VY+ LELC  G++ ++LK+R      E E   +++Q++ G+ YLHS GILHRDL LSNLLL+++   ++I+DFGLA  L    E+  T+CGTPN+++PE+     +GL AD+WS GC++Y  +TG+ PF    V +TL+ V +  Y +P  +SP A D +  +L+
Sbjct:    6 SIKDYNVFEQLGQGGFAQVYRAQVKASGKEVAIKMIDK-KTMKAS---RMTQRVEHEVKIHYQLKHPSILELYTFFEDKNYVYLVLELCHNGEMQQYLKSRPRPNLDEDETRHYLKQVIDGMVYLHSYGILHRDLTLSNLLLTKE-MNVKIADFGLATKLNIPDEKHFTMCGTPNFISPEIASRNAHGLEADVWSLGCMMYTFLTGKPPFDTDGVRNTLNRVVNSDYEMPGYVSPEAQDLIASLLK 246          
BLAST of mRNA_D-mesarthrocarpus_Contig10404.1.1 vs. uniprot
Match: A0A507EEX0_9FUNG (Protein kinase domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A507EEX0_9FUNG)

HSP 1 Score: 231 bits (588), Expect = 2.110e-66
Identity = 121/249 (48.59%), Postives = 173/249 (69.48%), Query Frame = 1
Query:   16 IDDYDLGQELGHGGFAVVYRARVRSTG---REVALKVIDK--VKAMLPGGDPSLTSRIATEVRVHWGLKHPAVVELIDFFEDARFVYMALELCGGGDLYRHLKTRG-PFSEPEAAGFMRQILAGLTYLHSRGILHRDLKLSNLLLSQDGRRLRISDFGLAVMLRDGQEERHTICGTPNYMAPE-VQDEGYGLSADLWSAGCLVYVMVTGRAPFQGQRVGDTLSNVRSGAYTVPDGLSPCASDFMECMLQ 741
            I+DY+L + LG GGF  V++A  +S G   REVA+K+IDK  +KA       ++T R+A EV +HW L HP+++EL ++FED  +VY+ +ELC  G+LYR++  R  P +EPEA G M QI+ GL YLH+ GI+HRDLKLSNLLL+ D   ++I+DFGLAV L D + E+ T+CGTPNY++PE V  + YGL++D+WS GC++  ++TG  PF+ + V +TL  V    Y++PD LS  A D +  +LQ
Sbjct:   57 IEDYELKEMLGRGGFGFVHKAVSKSKGTYGREVAIKMIDKRLMKAA------NMTRRVANEVEIHWQLHHPSILELYNYFEDQSYVYLVMELCQNGELYRYIHQRKCPLTEPEARGVMAQIVRGLLYLHANGIIHRDLKLSNLLLT-DNFDVKIADFGLAVKLNDPEGEQKTMCGTPNYISPEIVSRQPYGLTSDVWSLGCMIVTILTGTPPFESKAVKNTLDRVSRVDYSLPDSLSAHAKDLVHRLLQ 298          
BLAST of mRNA_D-mesarthrocarpus_Contig10404.1.1 vs. uniprot
Match: B3S722_TRIAD (Protein kinase domain-containing protein (Fragment) n=1 Tax=Trichoplax adhaerens TaxID=10228 RepID=B3S722_TRIAD)

HSP 1 Score: 215 bits (548), Expect = 4.200e-66
Identity = 108/243 (44.44%), Postives = 160/243 (65.84%), Query Frame = 1
Query:   16 IDDYDLGQELGHGGFAVVYRARVRSTGREVALKVIDKVKAMLPGGDPSLTSRIATEVRVHWGLKHPAVVELIDFFEDARFVYMALELCGGGDLYRHLKTRGPFSEPEAAGFMRQILAGLTYLHSRGILHRDLKLSNLLLSQDGRRLRISDFGLAVMLRDGQEERHTICGTPNYMAPEVQDEG-YGLSADLWSAGCLVYVMVTGRAPFQGQRVGDTLSNVRSGAYTVPDGLSPCASDFMECMLQ 741
            + DY + + LG GGF  VY+ + + TG+ VA+K+IDK KA+    D  + +R+  EV +H  LKHP++VEL ++FED+ +VY+ +ELC  G+   HLK +G  +E +A  F+ QI+ GL YLHS  I+HRDL LSNLLL+ D   ++ISDFGLA  L    E   T+CGTPNY++PE+ +   +GL +D+WS GC++Y  + G+ PF  + +  TL+ V SG+YT+P  L   + D +  +LQ
Sbjct:    1 LQDYQVLELLGKGGFGCVYKGKSKVTGQLVAVKMIDKQKAI----DADMIARVVKEVEIHCQLKHPSIVELYNYFEDSNYVYLIMELCEKGEFQHHLKAKGKIAEDQARRFLAQIVKGLLYLHSHDIVHRDLSLSNLLLTND-LDVKISDFGLATKLAVRGETHLTMCGTPNYISPEIANRSPHGLESDVWSLGCILYTFLVGKPPFDTKAIRTTLNKVVSGSYTIPPHLCAESEDLINRLLQ 238          
BLAST of mRNA_D-mesarthrocarpus_Contig10404.1.1 vs. uniprot
Match: A0A433TCE8_ELYCH (Serine/threonine-protein kinase PLK4 n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A433TCE8_ELYCH)

HSP 1 Score: 229 bits (585), Expect = 1.410e-65
Identity = 118/245 (48.16%), Postives = 168/245 (68.57%), Query Frame = 1
Query:   13 SIDDYDLGQELGHGGFAVVYRARVRSTGREVALKVIDKVKAMLPGGDPSLTSRIATEVRVHWGLKHPAVVELIDFFEDARFVYMALELCGGGDLYRHLKTRG-PFSEPEAAGFMRQILAGLTYLHSRGILHRDLKLSNLLLSQDGRRLRISDFGLAVMLRDGQEERHTICGTPNYMAPEV-QDEGYGLSADLWSAGCLVYVMVTGRAPFQGQRVGDTLSNVRSGAYTVPDGLSPCASDFMECMLQ 741
            +I+DY +   LG GGFA VYRAR   TG EVA+K+IDK K M      S+ +R+  EV +H  LKHP+++EL +FFED+ +VY+ LE+C  G++ R+L+T+  PF+E  A   MRQI+ G+ YLHS GILHRDL LSNLLL+++   ++I+DFGLA  L+  +E+  T+CGTPNY++PE+     +GL AD+WS GC++Y ++ G APF    V  TL+ V    Y +PD LSP A + ++ +LQ
Sbjct:    7 TIEDYQVLNLLGKGGFACVYRARSNKTGLEVAVKMIDK-KMMKAA---SMNARVKKEVEIHSRLKHPSILELYNFFEDSNYVYLVLEMCHNGEIQRYLRTQAQPFTEDAARRIMRQIVEGILYLHSHGILHRDLSLSNLLLTKNND-VKIADFGLATQLQGPEEKHFTMCGTPNYISPEIAMRSAHGLEADVWSLGCMLYTLLVGHAPFDTDAVKSTLNRVILAEYHLPDNLSPAACNLIQALLQ 246          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10404.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZ88_ECTSI1.270e-10262.11Aurora kinase n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A6H5L179_9PHAE2.790e-10261.97Aurora kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
A0A4P9W4A5_9FUNG5.340e-7449.60Kinase-like domain-containing protein (Fragment) n... [more]
V4B415_LOTGI1.330e-6747.13Protein kinase domain-containing protein (Fragment... [more]
A0A2C9JP73_BIOGL1.400e-6749.38Serine/threonine-protein kinase PLK4 n=1 Tax=Biomp... [more]
T1G479_HELRO2.670e-6744.49Protein kinase domain-containing protein n=1 Tax=H... [more]
M4SZK9_9BILA5.220e-6745.12Polo-like kinase 4 (Fragment) n=2 Tax=Brachionus T... [more]
A0A507EEX0_9FUNG2.110e-6648.59Protein kinase domain-containing protein n=2 Tax=S... [more]
B3S722_TRIAD4.200e-6644.44Protein kinase domain-containing protein (Fragment... [more]
A0A433TCE8_ELYCH1.410e-6548.16Serine/threonine-protein kinase PLK4 n=1 Tax=Elysi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10404contigD-mesarthrocarpus_Contig10404:1003..1969 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FZ88
PFAMsPOLO_box,Pkinase
Model size744
Max annot lvl2759|Eukaryota
KEGG koko:K06660,ko:K08863
KEGG Pathwayko04068,ko04111,ko04113,map04068,map04111,map04113
Hectar predicted targeting categoryother localisation
Exons2
Evalue2.09e-103
EggNOG OGsKOG0575@1|root,KOG0575@2759|Eukaryota
Ec32 ortholog descriptionProtein kinase domain
Ec32 orthologEc-06_008930.1
EC2.7.11.21
Descriptionregulation of centriole replication
Cds size744
COG categoryT
BRITEko00000,ko00001,ko01000,ko01001,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789179.4389355-CDS-D-mesarthrocarpus_Contig10404:1002..12581680789179.4389355-CDS-D-mesarthrocarpus_Contig10404:1002..1258Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10404 1003..1258 -
1680789179.452111-CDS-D-mesarthrocarpus_Contig10404:1481..19691680789179.452111-CDS-D-mesarthrocarpus_Contig10404:1481..1969Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10404 1482..1969 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10404.1.1prot_D-mesarthrocarpus_Contig10404.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10404 1003..1969 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10404.1.1

>prot_D-mesarthrocarpus_Contig10404.1.1 ID=prot_D-mesarthrocarpus_Contig10404.1.1|Name=mRNA_D-mesarthrocarpus_Contig10404.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=248bp
MGTTSIDDYDLGQELGHGGFAVVYRARVRSTGREVALKVIDKVKAMLPGG
DPSLTSRIATEVRVHWGLKHPAVVELIDFFEDARFVYMALELCGGGDLYR
HLKTRGPFSEPEAAGFMRQILAGLTYLHSRGILHRDLKLSNLLLSQDGRR
LRISDFGLAVMLRDGQEERHTICGTPNYMAPEVQDEGYGLSADLWSAGCL
VYVMVTGRAPFQGQRVGDTLSNVRSGAYTVPDGLSPCASDFMECMLQL
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mRNA from alignment at D-mesarthrocarpus_Contig10404:1003..1969-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10404.1.1 ID=mRNA_D-mesarthrocarpus_Contig10404.1.1|Name=mRNA_D-mesarthrocarpus_Contig10404.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=967bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10404:1003..1969- (Discosporangium mesarthrocarpum MT17_79)
ATGGGAACAACGTCAATAGATGATTATGACCTAGGCCAGGAACTGGGACA TGGTGGGTTTGCTGTTGTGTATCGTGCGAGGGTACGCAGCACAGGGCGGG AAGTGGCCTTGAAGGTCATCGACAAGGTGAAAGCAATGTTGCCTGGTGGC GATCCTTCTCTAACTTCCCGCATCGCAACCGAGGTGCGGGTTCACTGGGG GCTGAAACATCCTGCTGTGGTGGAGCTCATCGACTTCTTCGAAGACGCTC GTTTCGTGTACATGGCGCTCGAATTGTGCGGGGGGGGTGATCTGTACCGC CATCTGAAAACACGGGGCCCCTTCTCGGAGCCCGAGGCGGCAGGTTTCAT GCGTCAGATTCTCGCTGGATTGACCTATTTGCACTCCCGTGGCATCTTGC ATCGTGACCTCAAGCTGTCAAATCTTCTACTGTCGCAGGACGGTCGGCGT CTACGGATCAGTGACTTCGGGTTAGCGGTCATGCTCAGGTGCGGAGGGGA TTGCCTGGCTTCTTGTCGGTGTCCTCCCCCCGCTGCCCGCCTGCACCATT TTTATTTTCTCTATCCTTCCGTGAGGTGTCGTGGATTTTTCTGGTGTCGG CGTCGTATTTCGGCCTTTGTTTCCCTCTTGTCGTCGAAATCACACTTTCT CGGATAGGTGCCTGACCTATCCAAGGGCGCGCCTCCATTTTCTTTCCCAA TCCCCGCACAGAGATGGCCAGGAGGAGAGGCACACAATCTGCGGTACACC CAACTACATGGCTCCCGAGGTGCAGGATGAAGGGTATGGCTTGTCGGCGG ACCTGTGGTCTGCCGGATGCCTCGTGTACGTCATGGTGACGGGACGGGCG CCCTTCCAGGGGCAGAGGGTTGGCGACACGCTTTCAAACGTCCGAAGCGG AGCATACACTGTCCCGGATGGCCTGTCCCCCTGCGCCAGTGATTTCATGG AGTGCATGCTCCAACTC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10404:1003..1969-

>mRNA_D-mesarthrocarpus_Contig10404.1.1 ID=mRNA_D-mesarthrocarpus_Contig10404.1.1|Name=mRNA_D-mesarthrocarpus_Contig10404.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=744bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10404:1003..1969- (Discosporangium mesarthrocarpum MT17_79)
ATGGGAACAACGTCAATAGATGATTATGACCTAGGCCAGGAACTGGGACA
TGGTGGGTTTGCTGTTGTGTATCGTGCGAGGGTACGCAGCACAGGGCGGG
AAGTGGCCTTGAAGGTCATCGACAAGGTGAAAGCAATGTTGCCTGGTGGC
GATCCTTCTCTAACTTCCCGCATCGCAACCGAGGTGCGGGTTCACTGGGG
GCTGAAACATCCTGCTGTGGTGGAGCTCATCGACTTCTTCGAAGACGCTC
GTTTCGTGTACATGGCGCTCGAATTGTGCGGGGGGGGTGATCTGTACCGC
CATCTGAAAACACGGGGCCCCTTCTCGGAGCCCGAGGCGGCAGGTTTCAT
GCGTCAGATTCTCGCTGGATTGACCTATTTGCACTCCCGTGGCATCTTGC
ATCGTGACCTCAAGCTGTCAAATCTTCTACTGTCGCAGGACGGTCGGCGT
CTACGGATCAGTGACTTCGGGTTAGCGGTCATGCTCAGAGATGGCCAGGA
GGAGAGGCACACAATCTGCGGTACACCCAACTACATGGCTCCCGAGGTGC
AGGATGAAGGGTATGGCTTGTCGGCGGACCTGTGGTCTGCCGGATGCCTC
GTGTACGTCATGGTGACGGGACGGGCGCCCTTCCAGGGGCAGAGGGTTGG
CGACACGCTTTCAAACGTCCGAAGCGGAGCATACACTGTCCCGGATGGCC
TGTCCCCCTGCGCCAGTGATTTCATGGAGTGCATGCTCCAACTC
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