mRNA_D-mesarthrocarpus_Contig1040.7.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1040.7.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE) HSP 1 Score: 270 bits (691), Expect = 4.860e-81 Identity = 155/407 (38.08%), Postives = 225/407 (55.28%), Query Frame = 3
Query: 582 GEGVQPTI-----RLLAAFANETNREMVHLDAEQAFIQADIDTEVYVKLPQGCEELSNTVDRLNRALYNLKQASRCWNDSFIQVLLFLGFDQSKADPCFFRDVRNYDVDLLVTVHVNMII-VGTHEDCDALSKVLSFKSPTNNVWPLSLYAGCVFIWDWERGQLLISQTAFINQLCERFDVCSSSPTPAATNAKFLRRQEDEGAGCGRFRELIGVLLWAVNMTRPDISNSVRSLAKYSQDPSEEHWKGAIQVLQYLHGSREQGIVHEQGR--GLEL---V*PPLQALPMQETEQTDVLFPVGL*FLGWLR*LCFQGQRNAALSTSE--YMAMGEVFREALFVSNVLVFMQPQYGIPVGTCVYEDNKGAIDLAKNPFSTVRTKHSDVRHHFLRDLVQSKDISIYHIST 1763
GE PT+ RLLAA A E N + H D +QAF+Q+D+D +V+++LP+GC LS + +LN++LY LKQASR W+ + L+ LGF Q AD C FR + V + + VHV+ I +G E CD + L+ P N+ L Y+GC + DW+ G L ISQ + +L F V P K +DE FRELIG L+W TRPDI+N+VR++A+Y P E HW+ + +L Y+ + + GI +G GL + V + + L G + W + Q+ LST+E Y+++ +V +E LF+ V FM P+ G+P V+EDN+GAI LA+NP S +KH DVRHHF+R+LV K+ISI+H+ +
Sbjct: 9 GETYAPTVAVSSVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERCDQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFS----RTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPC-IPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVES 410
BLAST of mRNA_D-mesarthrocarpus_Contig1040.7.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE) HSP 1 Score: 270 bits (691), Expect = 4.490e-79 Identity = 155/407 (38.08%), Postives = 225/407 (55.28%), Query Frame = 3
Query: 582 GEGVQPTI-----RLLAAFANETNREMVHLDAEQAFIQADIDTEVYVKLPQGCEELSNTVDRLNRALYNLKQASRCWNDSFIQVLLFLGFDQSKADPCFFRDVRNYDVDLLVTVHVNMII-VGTHEDCDALSKVLSFKSPTNNVWPLSLYAGCVFIWDWERGQLLISQTAFINQLCERFDVCSSSPTPAATNAKFLRRQEDEGAGCGRFRELIGVLLWAVNMTRPDISNSVRSLAKYSQDPSEEHWKGAIQVLQYLHGSREQGIVHEQGR--GLEL---V*PPLQALPMQETEQTDVLFPVGL*FLGWLR*LCFQGQRNAALSTSE--YMAMGEVFREALFVSNVLVFMQPQYGIPVGTCVYEDNKGAIDLAKNPFSTVRTKHSDVRHHFLRDLVQSKDISIYHIST 1763
GE PT+ RLLAA A E N + H D +QAF+Q+D+D +V+++LP+GC LS + +LN++LY LKQASR W+ + L+ LGF Q AD C FR + V + + VHV+ I +G E CD + L+ P N+ L Y+GC + DW+ G L ISQ + +L F V P K +DE FRELIG L+W TRPDI+N+VR++A+Y P E HW+ + +L Y+ + + GI +G GL + V + + L G + W + Q+ LST+E Y+++ +V +E LF+ V FM P+ G+P V+EDN+GAI LA+NP S +KH DVRHHF+R+LV K+ISI+H+ +
Sbjct: 183 GETYAPTVAVSSVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERCDQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFS----RTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPC-IPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVES 584
BLAST of mRNA_D-mesarthrocarpus_Contig1040.7.1 vs. uniprot
Match: A0A6H5JEF2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEF2_9PHAE) HSP 1 Score: 264 bits (675), Expect = 1.120e-78 Identity = 156/407 (38.33%), Postives = 226/407 (55.53%), Query Frame = 3
Query: 582 GEGVQPTI-----RLLAAFANETNREMVHLDAEQAFIQADIDTEVYVKLPQGCEELSNTVDRLNRALYNLKQASRCWNDSFIQVLLFLGFDQSKADPCFFRDVRNYDVDLLVTVHVNMII-VGTHEDCDALSKVLSFKSPTNNVWPLSLYAGCVFIWDWERGQLLISQTAFINQLCERFDVCSSSPTPAATNAKFLRRQEDEGAGCGRFRELIGVLLWAVNMTRPDISNSVRSLAKYSQDPSEEHWKGAIQVLQYLHGSREQGIVHEQG--RGLELV*PPLQALPMQETEQTDV---LFPVGL*FLGWLR*LCFQGQRNAALSTSE--YMAMGEVFREALFVSNVLVFMQPQYGIPVGTCVYEDNKGAIDLAKNPFSTVRTKHSDVRHHFLRDLVQSKDISIYHIST 1763
GE PT+ RLLAA A E N ++ H D +QAF+Q+++D +V+++LPQGC LS + +L ++LY LKQASR W+ + LL LGF Q AD C FR + V +++ VHV+ I VG E CD + L+ P N+ L Y+ C + D ERG L ISQ F +L + + P + K E+E FREL+G L+W TRPDI+N+VR++A+Y P HWK A+ +L Y+ + GI E+G G+ + + T++ V L G + W + Q+ LST+E Y+A+ +V +E LF+ V FM P G+P V+EDN+GAI +A NP + +KH DVRHHF+R+LV+ K+ISI H+ T
Sbjct: 9 GELFAPTVSVSSVRLLAALACEQNLDLCHFDIQQAFVQSELDEDVFMRLPQGCGRLSGLIVKLCKSLYGLKQASRHWHSHLTRCLLLLGFLQCLADACVFRLMEEGRVIMIIVVHVDDIFAVGQKERCDKFGEDLNEMVPVKNLGELRWYSACFYERDVERGLLRISQQRFAEELAAEYGIEWGRSVPLPVSVKLTDFDENEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFS----RTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPC-IPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVPT 410
BLAST of mRNA_D-mesarthrocarpus_Contig1040.7.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE) HSP 1 Score: 264 bits (674), Expect = 3.070e-78 Identity = 150/398 (37.69%), Postives = 224/398 (56.28%), Query Frame = 3
Query: 588 GVQPTIRLLAAFANETNREMVHLDAEQAFIQADIDTEVYVKLPQGCEELSNTVDRLNRALYNLKQASRCWNDSFIQVLLFLGFDQSKADPCFFRDVRNYDVDLLVTVHVNMII-VGTHEDCDALSKVLSFKSPTNNVWPLSLYAGCVFIWDWERGQLLISQTAFINQLCERFDVCSSSPTPAATNAKFLRRQEDEGAGCGRFRELIGVLLWAVNMTRPDISNSVRSLAKYSQDPSEEHWKGAIQVLQYLHGSREQGIVHEQG--RGLELV*PPLQALPMQETEQTDV---LFPVGL*FLGWLR*LCFQGQRNAALSTSE--YMAMGEVFREALFVSNVLVFMQPQYGIPVGTCVYEDNKGAIDLAKNPFSTVRTKHSDVRHHFLRDLVQSKDISIYHI 1757
G ++LAA A E N ++ H D EQAF++++++ +VY++LPQGC LS + +L ++LY L+QASR W+ + L+ LGF+Q AD C FR + + V L++ VHV+ I VG E CD L+ P N+ L Y+GC + + E G+L ISQ F ++L + V P ++ K DE A FREL+G L+W TRPDI+N+VR++A+Y P HW A+ +L Y + GI ++G G L + ++ V + G + W + Q+ LST+E Y+A+G+V +E LF+ + FM PQ G+P V+EDN+GAI LA+NP S +KH DVRHHFLR+LV+ K+IS+ H+
Sbjct: 40 GTFTPAKMLAALACELNLDLCHFDVEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFAVGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFS----RTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPC-IPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHV 432
BLAST of mRNA_D-mesarthrocarpus_Contig1040.7.1 vs. uniprot
Match: A0A6H5K2R1_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R1_9PHAE) HSP 1 Score: 270 bits (691), Expect = 1.430e-75 Identity = 155/407 (38.08%), Postives = 225/407 (55.28%), Query Frame = 3
Query: 582 GEGVQPTI-----RLLAAFANETNREMVHLDAEQAFIQADIDTEVYVKLPQGCEELSNTVDRLNRALYNLKQASRCWNDSFIQVLLFLGFDQSKADPCFFRDVRNYDVDLLVTVHVNMII-VGTHEDCDALSKVLSFKSPTNNVWPLSLYAGCVFIWDWERGQLLISQTAFINQLCERFDVCSSSPTPAATNAKFLRRQEDEGAGCGRFRELIGVLLWAVNMTRPDISNSVRSLAKYSQDPSEEHWKGAIQVLQYLHGSREQGIVHEQGR--GLEL---V*PPLQALPMQETEQTDVLFPVGL*FLGWLR*LCFQGQRNAALSTSE--YMAMGEVFREALFVSNVLVFMQPQYGIPVGTCVYEDNKGAIDLAKNPFSTVRTKHSDVRHHFLRDLVQSKDISIYHIST 1763
GE PT+ RLLAA A E N + H D +QAF+Q+D+D +V+++LP+GC LS + +LN++LY LKQASR W+ + L+ LGF Q AD C FR + V + + VHV+ I +G E CD + L+ P N+ L Y+GC + DW+ G L ISQ + +L F V P K +DE FRELIG L+W TRPDI+N+VR++A+Y P E HW+ + +L Y+ + + GI +G GL + V + + L G + W + Q+ LST+E Y+++ +V +E LF+ V FM P+ G+P V+EDN+GAI LA+NP S +KH DVRHHF+R+LV K+ISI+H+ +
Sbjct: 704 GETYAPTVAVSSVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERCDQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFS----RTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPC-IPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVES 1105
BLAST of mRNA_D-mesarthrocarpus_Contig1040.7.1 vs. uniprot
Match: A0A6H5JV80_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV80_9PHAE) HSP 1 Score: 263 bits (673), Expect = 1.620e-75 Identity = 149/394 (37.82%), Postives = 229/394 (58.12%), Query Frame = 3
Query: 600 TIRLLAAFANETNREMVHLDAEQAFIQADIDTEVYVKLPQGCEELSNTVDRLNRALYNLKQASRCWNDSFIQVLLFLGFDQSKADPCFFRDVRNYDVDLLVTVHVNMII-VGTHEDCDALSKVLSFKSPTNNVWPLSLYAGCVFIWDWERGQLLISQTAFINQLCERFDVCSSSPTPAATNAKFLRRQEDEGAGCGRFRELIGVLLWAVNMTRPDISNSVRSLAKYSQDPSEEHWKGAIQVLQYLHGSREQGIVHEQGRGLEL-----V*PPLQALPMQETEQTDVLFPVGL*FLGWLR*LCFQGQRNAALSTSE--YMAMGEVFREALFVSNVLVFMQPQYGIPVGTCVYEDNKGAIDLAKNPFSTVRTKHSDVRHHFLRDLVQSKDISIYHI 1757
+IRL+ A A + N E++HLD EQAF Q+ +D EV +KLP GC+ +S + RLN++LY LKQASR + + LL +GF+QS +DPC R + +V ++ +HV+ I+ GT + + + L PT N+ + + GC F D E G + ISQ ++I + ERF++C +S PA+ EDE AG FRE++G L+W N TRP+ SN+VR++A++S +P + WK A ++L YL + + ++Q +++ V + + L V + W Q+ +LSTSE Y+AMG+ +EALFV+ +L ++P P V+EDN+GAI LA+NP S+ R+KH DVRHHFLR+L + I + H+
Sbjct: 306 SIRLVVALACKYNLELLHLDIEQAFFQSKLDHEVLMKLPPGCDSMSGKIVRLNKSLYGLKQASRTFYKRLVSDLLRIGFEQSLSDPCVLRFMMGDEVMGIIAIHVDDILYAGTKRLAEVIVEALGDSLPTKNLGEVRFFLGCAFSRDREAGTIEISQESYIRSVLERFNICRTSSIPASPANDSRSVMEDEEAGDVPFREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYKQDTTVDVGTLVYVDADFASKATDRRSVSGALVLVAGCLVSWFS----WTQKCVSLSTSEAEYIAMGDGVKEALFVNGMLQLLRPS-AKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHV 694
BLAST of mRNA_D-mesarthrocarpus_Contig1040.7.1 vs. uniprot
Match: A0A6H5KKK1_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK1_9PHAE) HSP 1 Score: 268 bits (684), Expect = 2.320e-75 Identity = 150/392 (38.27%), Postives = 229/392 (58.42%), Query Frame = 3
Query: 606 RLLAAFANETNREMVHLDAEQAFIQADIDTEVYVKLPQGCEELSNTVDRLNRALYNLKQASRCWNDSFIQVLLFLGFDQSKADPCFFRDVRNYDVDLLVTVHVNMII-VGTHEDCDALSKVLSFKSPTNNVWPLSLYAGCVFIWDWERGQLLISQTAFINQLCERFDVCSSSPTPAATNAKFLRRQEDEGAGCGRFRELIGVLLWAVNMTRPDISNSVRSLAKYSQDPSEEHWKGAIQVLQYLHGSREQGIVHEQGRGLEL-----V*PPLQALPMQETEQTDVLFPVGL*FLGWLR*LCFQGQRNAALSTSE--YMAMGEVFREALFVSNVLVFMQPQYGIPVGTCVYEDNKGAIDLAKNPFSTVRTKHSDVRHHFLRDLVQSKDISIYHI 1757
RL+ A A + N E++H D EQAF+Q+++D EV++KLP GC +S V RLN++LY LKQASR + + L +GF+QS +DPC R + +V +V +HV+ I+ GT + + L PT N+ + + GC F+ D E G + +SQ ++I + ERF+VC +S PA+ + EDEGAG FRE++G L+W N TRPDISN+VR++A++S +P + HWK A ++L YL + + + ++ V + + + V + W+ + Q+ + STSE Y+AMG+ +EALFV+ +L F++P P V EDN+GAI LA+NP S+ R+KH DVRHHFLR+L + I + H+
Sbjct: 543 RLVVALACKYNLELLHWDIEQAFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYAGTKSLAEVVVAALGDSLPTKNLGEVRFFLGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSIPASPTNDYRSVMEDEGAGDVPFREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWIS----KTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPS-AKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHV 929
BLAST of mRNA_D-mesarthrocarpus_Contig1040.7.1 vs. uniprot
Match: A0A6H5KN43_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN43_9PHAE) HSP 1 Score: 260 bits (665), Expect = 8.400e-75 Identity = 145/396 (36.62%), Postives = 232/396 (58.59%), Query Frame = 3
Query: 600 TIRLLAAFANETNREMVHLDAEQAFIQADIDTEVYVKLPQGCEELSNTVDRLNRALYNLKQASRCWNDSFIQVLLFLGFDQSKADPCFFRDVRNYDVDLLVTVHVNMII-VGTHEDCDALSKVLSFKSPTNNVWPLSLYAGCVFIWDWERGQLLISQTAFINQLCERFDVCSSSPTPAATNAKFLRRQEDEGAGCGRFRELIGVLLWAVNMTRPDISNSVRSLAKYSQDPSEEHWKGAIQVLQYLHGSREQGIVHEQGRGLEL-----V*PPLQALPMQETEQTDVLFPVGL*FLGWLR*LCFQGQRNAALSTSE--YMAMGEVFREALFVSNVLVFMQPQYGIPVGTCVYEDNKGAIDLAKNPFSTVRTKHSDVRHHFLRDLVQSKDISIYHIST 1763
+IRLL A A + + E +H D EQAF+Q+++D EV++KLP GCE ++ V RL+++LY L+QASR ++ + L +GF+QS +DPC + +V ++ +HV+ I+ G + + + L PT N+ + + GC F D E G + +SQ ++I + ERF+VC +S PA+ + EDEGAG FR+++G L+W N TRPDISN+VR++A++S +P++ HWK A ++L YL + + ++Q +++ V + + L V + W+ + Q+ LST+E Y+AMG+ +EALFV +L F++P I V EDN+GAI LA+NP S+ +KH DVRHH R+L + + I H+S+
Sbjct: 242 SIRLLVALACKYDLEFLHFDIEQAFVQSELDHEVFMKLPPGCESMTGKVVRLDKSLYGLRQASRTFHKRLVSDLKRIGFEQSLSDPCVLHFMMGDEVLGMIAIHVDDILYAGIERLAEMVVEALGDSLPTKNLGEVRFFLGCAFARDREAGTIEMSQESYIRSVLERFNVCRTSSIPASLTNDYRSVIEDEGAGDVPFRDVVGSLMWIANQTRPDISNAVRAVARHSHEPNKSHWKAAQKILNYLLETAHLTLKYKQDTMVDVGTLVYVDADFASEATDRRSDSGALVLVADCLVAWIS----RTQKCVTLSTTEAEYVAMGDGVKEALFVKGMLEFLRPSDRIGK-IQVREDNEGAIALAENPLSSCNSKHIDVRHHLFRNLTEEGVLEIRHVSS 632
BLAST of mRNA_D-mesarthrocarpus_Contig1040.7.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE) HSP 1 Score: 268 bits (684), Expect = 2.990e-74 Identity = 150/392 (38.27%), Postives = 229/392 (58.42%), Query Frame = 3
Query: 606 RLLAAFANETNREMVHLDAEQAFIQADIDTEVYVKLPQGCEELSNTVDRLNRALYNLKQASRCWNDSFIQVLLFLGFDQSKADPCFFRDVRNYDVDLLVTVHVNMII-VGTHEDCDALSKVLSFKSPTNNVWPLSLYAGCVFIWDWERGQLLISQTAFINQLCERFDVCSSSPTPAATNAKFLRRQEDEGAGCGRFRELIGVLLWAVNMTRPDISNSVRSLAKYSQDPSEEHWKGAIQVLQYLHGSREQGIVHEQGRGLEL-----V*PPLQALPMQETEQTDVLFPVGL*FLGWLR*LCFQGQRNAALSTSE--YMAMGEVFREALFVSNVLVFMQPQYGIPVGTCVYEDNKGAIDLAKNPFSTVRTKHSDVRHHFLRDLVQSKDISIYHI 1757
RL+ A A + N E++H D EQAF+Q+++D EV++KLP GC +S V RLN++LY LKQASR + + L +GF+QS +DPC R + +V +V +HV+ I+ GT + + L PT N+ + + GC F+ D E G + +SQ ++I + ERF+VC +S PA+ + EDEGAG FRE++G L+W N TRPDISN+VR++A++S +P + HWK A ++L YL + + + ++ V + + + V + W+ + Q+ + STSE Y+AMG+ +EALFV+ +L F++P P V EDN+GAI LA+NP S+ R+KH DVRHHFLR+L + I + H+
Sbjct: 810 RLVVALACKYNLELLHWDIEQAFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYAGTKSLAEVVVAALGDSLPTKNLGEVRFFLGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSIPASPTNDYRSVMEDEGAGDVPFREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWIS----KTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPS-AKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHV 1196
BLAST of mRNA_D-mesarthrocarpus_Contig1040.7.1 vs. uniprot
Match: A0A6H5JG40_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG40_9PHAE) HSP 1 Score: 263 bits (673), Expect = 9.900e-73 Identity = 149/398 (37.44%), Postives = 224/398 (56.28%), Query Frame = 3
Query: 588 GVQPTIRLLAAFANETNREMVHLDAEQAFIQADIDTEVYVKLPQGCEELSNTVDRLNRALYNLKQASRCWNDSFIQVLLFLGFDQSKADPCFFRDVRNYDVDLLVTVHVNMII-VGTHEDCDALSKVLSFKSPTNNVWPLSLYAGCVFIWDWERGQLLISQTAFINQLCERFDVCSSSPTPAATNAKFLRRQEDEGAGCGRFRELIGVLLWAVNMTRPDISNSVRSLAKYSQDPSEEHWKGAIQVLQYLHGSREQGIVHEQG--RGLELV*PPLQALPMQETEQTDV---LFPVGL*FLGWLR*LCFQGQRNAALSTSE--YMAMGEVFREALFVSNVLVFMQPQYGIPVGTCVYEDNKGAIDLAKNPFSTVRTKHSDVRHHFLRDLVQSKDISIYHI 1757
G ++LAA A E N ++ H D EQAF++++++ +VY++LPQGC LS + +L ++LY L+QASR W+ + L+ LGF+Q AD C FR + + V L++ VHV+ I VG E CD L+ P N+ L Y+GC + + E G+L ISQ F ++L + V P ++ K DE A FREL+G L+W TRPDI+N+VR++A+Y P HW A+ +L Y + GI ++G G L + ++ V + G + W + Q+ LST+E Y+A+G+V +E LF+ + FM PQ G+P ++EDN+GAI LA+NP S +KH DVRHHFLR+LV+ K+IS+ H+
Sbjct: 870 GTFTPAKMLAALACELNLDLCHFDIEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFAVGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDADEVATDFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFS----RTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPC-IPIFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHV 1262 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1040.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1040.7.1 >prot_D-mesarthrocarpus_Contig1040.7.1 ID=prot_D-mesarthrocarpus_Contig1040.7.1|Name=mRNA_D-mesarthrocarpus_Contig1040.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=249bp MVHLDAEQAFIQADIDTEVYVKLPQGCEELSNTVDRLNRALYNLKQASRCback to top mRNA from alignment at D-mesarthrocarpus_Contig1040:12424..14186- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig1040.7.1 ID=mRNA_D-mesarthrocarpus_Contig1040.7.1|Name=mRNA_D-mesarthrocarpus_Contig1040.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1763bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1040:12424..14186- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1040:12424..14186- >mRNA_D-mesarthrocarpus_Contig1040.7.1 ID=mRNA_D-mesarthrocarpus_Contig1040.7.1|Name=mRNA_D-mesarthrocarpus_Contig1040.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=747bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1040:12424..14186- (Discosporangium mesarthrocarpum MT17_79)back to top |