mRNA_D-mesarthrocarpus_Contig104.8.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_D-mesarthrocarpus_Contig104.8.1
Unique Name	mRNA_D-mesarthrocarpus_Contig104.8.1
Type	mRNA
Organism	Discosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)

Homology

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BLAST of mRNA_D-mesarthrocarpus_Contig104.8.1 vs. uniprot
Match: D8LBS0_ECTSI (eIF-5a domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBS0_ECTSI)

HSP 1 Score: 302 bits (773), Expect = 1.410e-92
Identity = 147/163 (90.18%), Postives = 153/163 (93.87%), Query Frame = 3

Query:   66 SCIMAEDKLNDYDFSGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFSGKKLEDVIPSTHTTSVPVVKRNEYQLLDISDDGFCSLLTEEGDTKDDLKLPDFPEGFGNEIKTNFDEGKTLAVTVMAAMGHEQIVAYKEEA 554
            S +  EDKLNDYDF+GTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIF+GKKLEDVIPSTHTTSVPVV RNEYQLLDISDDGFCSLLTEEGDTKDDL+LP +PEGFGNEIK  FDEG TL VTVMAAMGHEQIV YKEE+
Sbjct:   37 STMATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPEGFGNEIKAKFDEGATLCVTVMAAMGHEQIVTYKEES 199

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BLAST of mRNA_D-mesarthrocarpus_Contig104.8.1 vs. uniprot
Match: A0A6H5KDL5_9PHAE (eIF-5a domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDL5_9PHAE)

HSP 1 Score: 301 bits (771), Expect = 1.750e-91
Identity = 147/165 (89.09%), Postives = 154/165 (93.33%), Query Frame = 3

Query:   60 SFSCIMAEDKLNDYDFSGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFSGKKLEDVIPSTHTTSVPVVKRNEYQLLDISDDGFCSLLTEEGDTKDDLKLPDFPEGFGNEIKTNFDEGKTLAVTVMAAMGHEQIVAYKEEA 554
            S S +  EDKLNDYDF+GTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIF+GKKLEDVIPSTHTTSVPVV RNEYQLLDISDDGFCSLLTEEGDTKDDL+LP +PEGFGNEIK  F+EG TL VTVMAAMGHEQIV YKEE+
Sbjct:   89 SLSTMATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPEGFGNEIKAKFEEGLTLCVTVMAAMGHEQIVTYKEES 253

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BLAST of mRNA_D-mesarthrocarpus_Contig104.8.1 vs. uniprot
Match: A0A835Z7R2_9STRA (Eukaryotic translation initiation factor 5A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7R2_9STRA)

HSP 1 Score: 251 bits (640), Expect = 5.030e-74
Identity = 118/160 (73.75%), Postives = 139/160 (86.88%), Query Frame = 3

Query:   81 EDKLNDYDFSGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFSGKKLEDVIPSTHTTSVPVVKRNEYQLLDISDDGFCSLLTEEGDTKDDLKLPDFPEGFGNEIKTNFDEGKTLAVTVMAAMGHEQIVAYKEEA*G 560
            ++ LN+YDF+ +DAGASHT P +AGQIRKGGYIVIKG PCKV NVSTSKTGKHGHAKANFTA DIF+GKKLED++P++H TSVP V R +YQLLDISDDGF SLLTE GDTKDDLKLP FPEGF  +++T FD GKTL VTV++AMGH+Q++AYKE+  G
Sbjct:    8 DEALNNYDFTSSDAGASHTFPMDAGQIRKGGYIVIKGRPCKVANVSTSKTGKHGHAKANFTAIDIFTGKKLEDIVPTSHATSVPNVARVDYQLLDISDDGFLSLLTESGDTKDDLKLPGFPEGFDEQLRTEFDAGKTLIVTVVSAMGHDQVMAYKEDTTG 167

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BLAST of mRNA_D-mesarthrocarpus_Contig104.8.1 vs. uniprot
Match: W7U6Y6_9STRA (Eukaryotic translation initiation factor 5A n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6Y6_9STRA)

HSP 1 Score: 230 bits (586), Expect = 1.600e-66
Identity = 115/163 (70.55%), Postives = 137/163 (84.05%), Query Frame = 3

Query:   75 MAEDK---LNDYDFSGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFSGKKLEDVIPSTHTTSVPVVKRNEYQLLDISDDGFCSLLTEEGDTKDDLKLPDFPEGFGNEIKTNFDEGKTLAVTVMAAMGHEQIVAYKEEA 554
            MAE+    + DYDFSGT AGAS   PSEAGQI+KGGYI+IKG PCKVVNVSTSKTGKHGHAKANFTA DIF+GKK+EDV+P+THTT VP V R+EYQLLDI +DGF SLL E+G T+DDLKLPD+PEGF  EI   + +GK+L+V+V++A G +QI+AYKEEA
Sbjct:    1 MAEEAAATIEDYDFSGTTAGASDVFPSEAGQIKKGGYIMIKGRPCKVVNVSTSKTGKHGHAKANFTAIDIFNGKKVEDVVPTTHTTYVPNVNRSEYQLLDI-EDGFVSLLQEDGGTRDDLKLPDYPEGFDQEILKAYQDGKSLSVSVLSACGIDQIIAYKEEA 162

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BLAST of mRNA_D-mesarthrocarpus_Contig104.8.1 vs. uniprot
Match: A0A7S2UU65_9STRA (Eukaryotic translation initiation factor 5A n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU65_9STRA)

HSP 1 Score: 227 bits (579), Expect = 1.560e-65
Identity = 109/155 (70.32%), Postives = 132/155 (85.16%), Query Frame = 3

Query:   87 KLNDYDFSGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFSGKKLEDVIPSTHTTSVPVVKRNEYQLLDISDDGFCSLLTEEGDTKDDLKLPDFPEGFGNEIKTNFDEGKTLAVTVMAAMGHEQIVAYKEE 551
            KL+D+ F   ++GAS TIP EAGQIRKGG+IVIKG PCKVVNVSTSKTGKHGHAKANFTA DIF+GKK ED++P+THTTSVP V R EYQL+DISDDG+ SLLT+ GDTKDDL LP  PEGF +EI+  FDEGK++ +TV++AMG +Q+V+ KE+
Sbjct:    7 KLDDFHFDTGESGASLTIPMEAGQIRKGGHIVIKGKPCKVVNVSTSKTGKHGHAKANFTAIDIFTGKKYEDIVPTTHTTSVPNVSRAEYQLIDISDDGYLSLLTDSGDTKDDLVLPTHPEGFADEIRAAFDEGKSMVLTVLSAMGTDQVVSMKED 161

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BLAST of mRNA_D-mesarthrocarpus_Contig104.8.1 vs. uniprot
Match: M4B4L4_HYAAE (Eukaryotic translation initiation factor 5A n=18 Tax=Peronosporaceae TaxID=4777 RepID=M4B4L4_HYAAE)

HSP 1 Score: 226 bits (575), Expect = 5.110e-65
Identity = 108/159 (67.92%), Postives = 131/159 (82.39%), Query Frame = 3

Query:   75 MAEDKLNDYDFSGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFSGKKLEDVIPSTHTTSVPVVKRNEYQLLDISDDGFCSLLTEEGDTKDDLKLPDFPEGFGNEIKTNFDEGKTLAVTVMAAMGHEQIVAYKEE 551
            MAE++  D+ F  TDAGAS T PSEAGQIRKGG+I+IKGHPCKVVN+STSKTGKHGHAK NFTA DIF+ KK ED++PSTHTTSVP V R EY LLDI+DD FCSL+ + GDT++D+KLP FPE FG EI+ +F++GK L +TV+ A G EQI+A KE+
Sbjct:    1 MAEEE-QDFTFHSTDAGASETYPSEAGQIRKGGFIMIKGHPCKVVNMSTSKTGKHGHAKCNFTALDIFTNKKYEDIVPSTHTTSVPFVSRAEYTLLDITDDDFCSLMDDSGDTREDIKLPTFPETFGEEIRADFNDGKQLVLTVLKACGTEQIIAKKED 158

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BLAST of mRNA_D-mesarthrocarpus_Contig104.8.1 vs. uniprot
Match: A0A6A3TKK1_9STRA (Eukaryotic translation initiation factor 5A n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TKK1_9STRA)

HSP 1 Score: 225 bits (574), Expect = 1.320e-64
Identity = 106/159 (66.67%), Postives = 131/159 (82.39%), Query Frame = 3

Query:   75 MAEDKLNDYDFSGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFSGKKLEDVIPSTHTTSVPVVKRNEYQLLDISDDGFCSLLTEEGDTKDDLKLPDFPEGFGNEIKTNFDEGKTLAVTVMAAMGHEQIVAYKEE 551
            MAE + +D++F  TDAGAS T PSEAGQIRKGG+I+IKGHPCKVVNVSTSKTGKHGHAK NFTA DIF+ KK ED++PSTHTTSVP V R EY LLDI+DD F SL+ + G+T++D+KLP FPE F +EI+ +FD+GK L +TV+ A G EQ++A KE+
Sbjct:   18 MAEHEEHDFEFHSTDAGASETYPSEAGQIRKGGFIMIKGHPCKVVNVSTSKTGKHGHAKCNFTALDIFTNKKYEDIVPSTHTTSVPFVSRAEYTLLDITDDDFVSLMDDSGETREDIKLPTFPETFADEIRADFDDGKQLVLTVLKACGTEQVIAKKED 176

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BLAST of mRNA_D-mesarthrocarpus_Contig104.8.1 vs. uniprot
Match: A0A8K1CGM3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGM3_PYTOL)

HSP 1 Score: 224 bits (570), Expect = 2.460e-64
Identity = 105/156 (67.31%), Postives = 128/156 (82.05%), Query Frame = 3

Query:   93 NDYDFSGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFSGKKLEDVIPSTHTTSVPVVKRNEYQLLDISDDGFCSLLTEEGDTKDDLKLPDFPEGFGNEIKTNFDEGKTLAVTVMAAMGHEQIVAYKEEA*G 560
            +DY F  TDAGAS T P EAGQI+K G+I+IKGHPCKVVNVSTSKTGKHGHAK NFTA DIF+ KKLED++PSTHTTSVP V R EY LLDIS+D F SL+ E GDT++D+KLP +P+GF NEI+++F++GK L VTV+ A G EQI++ KE+  G
Sbjct:    3 DDYTFESTDAGASETYPMEAGQIKKNGFIMIKGHPCKVVNVSTSKTGKHGHAKCNFTALDIFTNKKLEDIVPSTHTTSVPFVSRKEYTLLDISEDDFVSLMDESGDTREDVKLPSYPDGFANEIRSDFEDGKQLVVTVLKACGTEQIISKKEDTTG 158

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BLAST of mRNA_D-mesarthrocarpus_Contig104.8.1 vs. uniprot
Match: A0A5D6XTX1_9STRA (Eukaryotic translation initiation factor 5A n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTX1_9STRA)

HSP 1 Score: 219 bits (559), Expect = 8.290e-63
Identity = 105/152 (69.08%), Postives = 124/152 (81.58%), Query Frame = 3

Query:   96 DYDFSGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFSGKKLEDVIPSTHTTSVPVVKRNEYQLLDISDDGFCSLLTEEGDTKDDLKLPDFPEGFGNEIKTNFDEGKTLAVTVMAAMGHEQIVAYKEE 551
            DY F  TDAGAS T P EAGQIRKGG+I+IKGHPCKVV+VSTSKTGKHGHAK NFTA DIF+ KKLED++PSTHTTSVP V R EY LLDISDD F +L+ + GDT+DD+KLP FP+ F +EI+ +FD GK L VTV+ A G EQI++ KE+
Sbjct:    5 DYTFESTDAGASDTYPCEAGQIRKGGFIMIKGHPCKVVSVSTSKTGKHGHAKCNFTALDIFTNKKLEDIVPSTHTTSVPFVARAEYTLLDISDDDFVTLMDDGGDTRDDIKLPTFPDNFADEIRADFDSGKQLVVTVLKACGIEQIISKKED 156

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BLAST of mRNA_D-mesarthrocarpus_Contig104.8.1 vs. uniprot
Match: K3WUI8_GLOUD (Eukaryotic translation initiation factor 5A n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUI8_GLOUD)

HSP 1 Score: 218 bits (554), Expect = 4.090e-62
Identity = 101/153 (66.01%), Postives = 125/153 (81.70%), Query Frame = 3

Query:   93 NDYDFSGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFSGKKLEDVIPSTHTTSVPVVKRNEYQLLDISDDGFCSLLTEEGDTKDDLKLPDFPEGFGNEIKTNFDEGKTLAVTVMAAMGHEQIVAYKEE 551
            +DY F  TDAGAS T P EAGQIRKGG+I+IKGHPCKVV+VSTSKTGKHGHAK NFTA DIF+ KKLED++PSTHTTSVP V R+EY LLDI+DD F SL+ + G+T++D+KLP FP+ F  EI+ +FD GK L +TV+ A G EQ+++ KE+
Sbjct:    3 DDYTFESTDAGASDTFPCEAGQIRKGGFIMIKGHPCKVVSVSTSKTGKHGHAKCNFTALDIFTNKKLEDIVPSTHTTSVPFVSRSEYTLLDITDDDFLSLMDDSGETREDIKLPTFPDNFAEEIRADFDAGKQLVLTVLKACGTEQVISKKED 155

The following BLAST results are available for this feature:

BLAST of mRNA_D-mesarthrocarpus_Contig104.8.1 vs. uniprot

BLAST of mRNA_D-mesarthrocarpus_Contig104.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LBS0_ECTSI	1.410e-92	90.18	eIF-5a domain-containing protein n=1 Tax=Ectocarpu...	[more]
A0A6H5KDL5_9PHAE	1.750e-91	89.09	eIF-5a domain-containing protein n=1 Tax=Ectocarpu...	[more]
A0A835Z7R2_9STRA	5.030e-74	73.75	Eukaryotic translation initiation factor 5A n=2 Ta...	[more]
W7U6Y6_9STRA	1.600e-66	70.55	Eukaryotic translation initiation factor 5A n=2 Ta...	[more]
A0A7S2UU65_9STRA	1.560e-65	70.32	Eukaryotic translation initiation factor 5A n=1 Ta...	[more]
M4B4L4_HYAAE	5.110e-65	67.92	Eukaryotic translation initiation factor 5A n=18 T...	[more]
A0A6A3TKK1_9STRA	1.320e-64	66.67	Eukaryotic translation initiation factor 5A n=3 Ta...	[more]
A0A8K1CGM3_PYTOL	2.460e-64	67.31	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A5D6XTX1_9STRA	8.290e-63	69.08	Eukaryotic translation initiation factor 5A n=1 Ta...	[more]
K3WUI8_GLOUD	4.090e-62	66.01	Eukaryotic translation initiation factor 5A n=1 Ta...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
D-mesarthrocarpus_Contig104	contig	D-mesarthrocarpus_Contig104:26765..33850 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Seed ortholog	2880.D8LBS0
Preferred name	EIF5A2
PFAMs	EFP_N,eIF-5a
Model size	3050
Max annot lvl	2759\|Eukaryota
KEGG ko	ko:K03263,ko:K10447
KEGG Pathway	ko04120,map04120
Hectar predicted targeting category	other localisation
GOs	GO:0000003,GO:0002119,GO:0002164,GO:0002181,GO:0002182,GO:0002184,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0003746,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005642,GO:0005643,GO:0005737,GO:0005739,GO:0005777,GO:0005783,GO:0005789,GO:0005829,GO:0005840,GO:0006403,GO:0006405,GO:0006406,GO:0006412,GO:0006413,GO:0006414,GO:0006415,GO:0006417,GO:0006446,GO:0006448,GO:0006449,GO:0006452,GO:0006518,GO:0006611,GO:0006807,GO:0006810,GO:0006873,GO:0006874,GO:0006875,GO:0006886,GO:0006913,GO:0006915,GO:0007204,GO:0007275,GO:0007276,GO:0007283,GO:0007548,GO:0007568,GO:0008079,GO:0008104,GO:0008135,GO:0008150,GO:0008152,GO:0008219,GO:0008284,GO:0008360,GO:0008406,GO:0009058,GO:0009059,GO:0009653,GO:0009719,GO:0009725,GO:0009791,GO:0009887,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010509,GO:0010556,GO:0010557,GO:0010564,GO:0010604,GO:0010608,GO:0010628,GO:0010660,GO:0010661,GO:0010662,GO:0010663,GO:0010665,GO:0010666,GO:0010941,GO:0010942,GO:0012501,GO:0012505,GO:0015031,GO:0015833,GO:0015931,GO:0016020,GO:0016043,GO:0017069,GO:0017070,GO:0019222,GO:0019538,GO:0019725,GO:0019953,GO:0022411,GO:0022414,GO:0022603,GO:0022604,GO:0022626,GO:0030003,GO:0030425,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031344,GO:0031503,GO:0031967,GO:0031975,GO:0031984,GO:0032268,GO:0032270,GO:0032465,GO:0032467,GO:0032501,GO:0032502,GO:0032504,GO:0032870,GO:0032984,GO:0032991,GO:0033036,GO:0034248,GO:0034250,GO:0034613,GO:0034641,GO:0034645,GO:0035262,GO:0036477,GO:0042127,GO:0042175,GO:0042221,GO:0042579,GO:0042592,GO:0042886,GO:0042981,GO:0042995,GO:0043005,GO:0043021,GO:0043022,GO:0043025,GO:0043043,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043243,GO:0043244,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044087,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044297,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044445,GO:0044446,GO:0044463,GO:0044464,GO:0044703,GO:0044877,GO:0045137,GO:0045138,GO:0045184,GO:0045595,GO:0045597,GO:0045727,GO:0045787,GO:0045901,GO:0045905,GO:0045948,GO:0046661,GO:0046907,GO:0047485,GO:0048232,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048608,GO:0048609,GO:0048731,GO:0048856,GO:0048878,GO:0050657,GO:0050658,GO:0050789,GO:0050793,GO:0050794,GO:0050801,GO:0050896,GO:0051028,GO:0051094,GO:0051128,GO:0051130,GO:0051147,GO:0051149,GO:0051168,GO:0051169,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051236,GO:0051246,GO:0051247,GO:0051302,GO:0051480,GO:0051641,GO:0051649,GO:0051704,GO:0051716,GO:0051726,GO:0051781,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0060255,GO:0060491,GO:0060548,GO:0061458,GO:0065007,GO:0065008,GO:0070727,GO:0070887,GO:0071166,GO:0071310,GO:0071426,GO:0071427,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072503,GO:0072507,GO:0080090,GO:0090068,GO:0090342,GO:0090343,GO:0090598,GO:0097066,GO:0097067,GO:0097159,GO:0097447,GO:0097458,GO:0098589,GO:0098771,GO:0098805,GO:0098827,GO:0120025,GO:0120038,GO:1900247,GO:1900249,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903270,GO:1903272,GO:1990904,GO:2000112,GO:2000377,GO:2000379,GO:2000765,GO:2000767
Exons	5
Evalue	4.34e-103
EggNOG OGs	COG0231@1\|root,KOG3271@2759\|Eukaryota
Ec32 ortholog description	Translation protein SH3-like domain
Ec32 ortholog	Ec-27_002930.1
Description	eukaryotic translation initiation factor
Cds size	483
COG category	J
BRITE	ko00000,ko00001,ko03012,ko04121

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_D-mesarthrocarpus_Contig104.8.1	prot_D-mesarthrocarpus_Contig104.8.1	Discosporangium mesarthrocarpum MT17_79	polypeptide	D-mesarthrocarpus_Contig104 27878..31357 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789178.771888-UTR-D-mesarthrocarpus_Contig104:26764..26831	1680789178.771888-UTR-D-mesarthrocarpus_Contig104:26764..26831	Discosporangium mesarthrocarpum MT17_79	UTR	D-mesarthrocarpus_Contig104 26765..26831 +
1680789178.7864065-UTR-D-mesarthrocarpus_Contig104:27870..27877	1680789178.7864065-UTR-D-mesarthrocarpus_Contig104:27870..27877	Discosporangium mesarthrocarpum MT17_79	UTR	D-mesarthrocarpus_Contig104 27871..27877 +
1680789178.8332844-UTR-D-mesarthrocarpus_Contig104:31357..33850	1680789178.8332844-UTR-D-mesarthrocarpus_Contig104:31357..33850	Discosporangium mesarthrocarpum MT17_79	UTR	D-mesarthrocarpus_Contig104 31358..33850 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789178.7949111-CDS-D-mesarthrocarpus_Contig104:27877..28006	1680789178.7949111-CDS-D-mesarthrocarpus_Contig104:27877..28006	Discosporangium mesarthrocarpum MT17_79	CDS	D-mesarthrocarpus_Contig104 27878..28006 +
1680789178.8030937-CDS-D-mesarthrocarpus_Contig104:29493..29689	1680789178.8030937-CDS-D-mesarthrocarpus_Contig104:29493..29689	Discosporangium mesarthrocarpum MT17_79	CDS	D-mesarthrocarpus_Contig104 29494..29689 +
1680789178.812035-CDS-D-mesarthrocarpus_Contig104:30928..31023	1680789178.812035-CDS-D-mesarthrocarpus_Contig104:30928..31023	Discosporangium mesarthrocarpum MT17_79	CDS	D-mesarthrocarpus_Contig104 30929..31023 +
1680789178.8222547-CDS-D-mesarthrocarpus_Contig104:31294..31357	1680789178.8222547-CDS-D-mesarthrocarpus_Contig104:31294..31357	Discosporangium mesarthrocarpum MT17_79	CDS	D-mesarthrocarpus_Contig104 31295..31357 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at D-mesarthrocarpus_Contig104:26765..33850+
coding sequence from alignment at D-mesarthrocarpus_Contig104:26765..33850+

protein sequence of mRNA_D-mesarthrocarpus_Contig104.8.1

>prot_D-mesarthrocarpus_Contig104.8.1 ID=prot_D-mesarthrocarpus_Contig104.8.1|Name=mRNA_D-mesarthrocarpus_Contig104.8.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=161bp
MAEDKLNDYDFSGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTS
KTGKHGHAKANFTATDIFSGKKLEDVIPSTHTTSVPVVKRNEYQLLDISD
DGFCSLLTEEGDTKDDLKLPDFPEGFGNEIKTNFDEGKTLAVTVMAAMGH
EQIVAYKEEA*

mRNA from alignment at D-mesarthrocarpus_Contig104:26765..33850+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_D-mesarthrocarpus_Contig104.8.1 ID=mRNA_D-mesarthrocarpus_Contig104.8.1|Name=mRNA_D-mesarthrocarpus_Contig104.8.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=7086bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig104:26765..33850+ (Discosporangium mesarthrocarpum MT17_79)
CACCCTCCTCGGTTGGCCCTCCCTCTCCCACCTTTCCCTGCTCGTCGTTG
GATCAATTCTCCTTTAGGTGAGTAATACTCCTTCGTAATGGCGAGAGCAC
CCTTGTGCCAACGGGTGTACTAACACGTTCGGTCAGGATTGGAAGGGCTC
CTCGACCTGAGGCTGGGGGTGGGAAGGGTGCTGGTTTTAAACGTGTGCTG
ACTATACGCGAGCCACTGAAATGATAGCGATGCATAGATGAGCCTGGGAT
CACAGGAATTTTGTCATCTGCAAGGTCCGATGGGAGGCTAGACAAGGAGT
AATTGCCCGACTTGGCTCGAGCTCGGTCCGGGTTTCGATAGTATGCTGAC
GAGTAAAATCGCGCCTAAGCCTTAACATACGATAGCACGACCACGAGGTA
AGATTTCCAATAGGAAATGTGTTGTGTTAAACGGATTGTGGATAAGACTG
GTCGGGTTGAGGGACAAGTGCAGGTAGCGGTGTGTCTTGGTGGGCTTCCT
TCGCATGGTCGTGGACCACCCCACTTGGACGTGAACCAGCTCCAGGGCAA
ATAGGGGCCTCGCGCCTGGGATCTTTATCTCAGGGCACGGCTTGGAGGAA
TGCTTTTCCGGACCCTGAGTATTCGCTCATTCAAGCCCTCTCGGGGTCCT
TTTTCTACGTCGTTAGTCACCGTAGGAGTCCATGGATAACCAAACCCTCG
CTGGTGTGGGTACCCTTGACACTTTCTCTCGGCGTTGTGAAGCTAGTCCG
GAGACTGCTAAGTCACAAGTTCGAAGTCGTACTGATTGTACCTTAATATT
GCTTGTCGTCCTGGTCTCCTGTGCTTGACTCTCAGATGTCACCACAGTAG
GCTTACTGTGGATTATTCCCGTGGAAGGTATAACGGGTCGCTCTCACCCC
TGAATAGTGCATGGGGTGTACGGTGGGGATGCAGAAGCTACCGTAACCAT
GGTTGCTCTAAATCCTGAAGAGGGCCTCACTTGACCGCCCCATACGGTGT
ATCACCGGATCACCCGTTCCACTGTTCTACCGCTATGCTCGTTGGCCTCA
CCCCTGCCCTCCTGCGCCCTACGCCACATTCTCCCTGCAAACGCGCTGAC
CTGCAGCTGCATCATGGCTGAGGACAAGCTCAATGACTATGACTTCTCGG
GCACAGACGCCGGTGCCTCACACACCATCCCCTCTGAAGCCGGGCAGATC
CGGAAGGGCGGGTACATCGTGATCAAGGGCCACCCTTGCAAGGTGCGGTT
ATATAGGTGCTGGAGGGAGAGGTTCCGAGGAAGAGCAGGAGTAGGGACAA
AGTTTCCTTGGTGGGGTGGATGTTGACGCCTTGCTTAATGTGTTTTGAAA
AATGCCTTTCATGTTGTTTGGATGGCAAGGGACTTTAACCCATTGCCTTT
GATTCACATTTTCGTGGTCTCTGATTTGACAGTTTTGGGTTCACCCAGAA
TGTAAAGTCGTTTTATCATGTTATCCCGACTCACTCAAAGTCGTGATTTG
TGATTGAGGGGTTAGGGTTCATCCAGAGATGAATAAGGCATCATTCCTCT
TTCTTTTTTGCCCGAGTACAGGACAGCTCCACCAGGCCCATTATGAGCAT
GCACCTCTGTAGGTTCATAGGTATACCCAGGCAGTGAGCTCAGAAGATCC
CTGTGCCGTGGGCACTTGTCCAGTGCTGGTGACATGCTAATGGTAGATTA
GTTTGTATGGCAGGGTAAACCTGCATTGTGTTAACTGTGGTTGTGATAAA
TTCTTGAAGGAAAACAAGGAAGATATGAATGTTCTTGGAAGGGCTTTGTG
GGATATGGTAGTGATTGCTTGCATTTGAATGGGACGCTTGGCCCAGCTGT
CTTGACTGTGAGAGAATCTGAAAGTCGGCTGGAGCTAGAGGTGGGTGGGT
GTTGGACAACGGGCGATTAGAGTCATTGGGACGAAATTTATTAACCTTCC
CAGAAAGAACTGTGCTTCAGTTGAGGGAGGGGGGGGTGAGGTCGGAATAT
TGGACTGGCTTCTATGTTGGAATTGGAACCCCTAAGTCTTTTCTGGTTTT
GTTGCACTTACGCTGCAACGATTTTTTTTTGTTCTCCCTATGGGTGGACT
GATTCTAGATGTGGGGGAATGAGTAATGGAGAAATGGATATGGCAGTACC
TTGCAGTGAGGCACTGACCTGCTGTGGAAATTGGGAGGGTATTGATGTGA
CGACCAGCACTGTGTGTTGTAGGTTGGTGGAGGACCGCCGGAGACACGTG
GGGACTAGTATCTTGAGAGTCTGTAGAGAGTGAGTGGGCATGAACCAAGT
TGTGGTTTGTTGTCTTCCAAGAGAAAAAAAAAAAGCGTGAAAGTGCACCC
TGTAGTGCGAAGAAGTGGATGGGCGTAACAGTTGAGGATGGGCATAACTC
AGTCCCTGCAGCACCTTTCATCATGAAGCATTGTACAGTAATGGGATCAG
TTTAACCCCATTGAACCGTCTTATCTCTCTCTCTCTCTGTCTGTGCACCC
CTCACCTTCACCCCATTAACCTCCACTTTGATGCTACGCGGGCTGGAGAT
GTACACCCACACACCTTGCCCAGAAGAAGGGCATTTTGTGTGTGAGATGC
CACAGAGGTCTTACCTCATGAAGAGGCACTCGTTTAGTGGTGCCTACTAA
CTAATTCCTTATTCTGTACACGTTTGCCTTTTTCACACCCACCCATCTTT
TCGGTTACGCGACCGGCCGTTTCGTCCAGGTGGTGAACGTCTCCACCTCC
AAGACAGGGAAACATGGTCACGCCAAGGCGAACTTCACCGCCACCGACAT
CTTCTCCGGGAAGAAGCTGGAAGATGTCATCCCCTCCACCCACACCACGT
CCGTCCCTGTGGTGAAGCGCAATGAGTACCAGCTCCTTGACATATCTGAC
GACGGCTTCTGCTCTCTTCTCACCGGTGCGTTGGACGCTGGCAGCCGTAA
TGGGAAGGGCCTTTTCTGTCTTTTTTTTTTAGTCATTTGAATCCGAGAGG
GTTTTTGGCACCAGGTAATTGGGTATGCACCAATGGCGTGTCAGTGAATT
AATTGCATTCTCATGAATTGTGCCGCCATGAGGGGGTTGGTTACTGTGGC
TAGGTGGTGAGAGAGGTTGAAGTGAAGACAGAGCGTGAGTTGTCGCTTGA
GAATCTGGATGCTCGCTAGGAGGGGGTATTTTGTGTGATTTTTTTCATTC
AAAGAACTGCTTCCTCTGTACAGCATCAGTTTTTACCAATTGCCTGATGG
TTCAGTTGTCCTTGGGTATGAATCCTTCAAGCATTGTGGGGGCATTGTGT
AACACATATAAGACTTCTCACCAAATTTTGGGGTGACACGGAGTCCTTCA
TGTAAACTTCTCCTGCGCCCCTTGAGCAACTGTAAAAGAAACTTTCCTTT
CATAAATGGCACATTATGAGCCAATATCCTTTCATCTTTGGTACGAGTTA
TCGCACAGTACACACCTGCTAGATGAGGCCCTTTGGAGTAAGGGAACATT
GACACCCCATGGACCGTGGATCTAGTGGCATGTCAATTGACCTGCTGTGG
TAGTTGTACCTGCTGAGCCTGAGTCCTGTGAATCCGACGTTTGTCAAAAG
GGATCATTTCAGCAACCGGTATTCCCAGCCGTTACAGCCCCCTCTTAATG
CTGAGTACCATTCAAGGACTGAACCTGCCTTGGACTATCAACATTTAGTT
GACTGTTTTCATGACCAATGCTTTTGAATGTTTTGGGCAATTCCCCCCCC
CCCCTCTGCAGTACTTCTAGCTTGACTTTGGGTCAGTCATTCTCAAGTAG
GGCATCAAGTTTCAAAAATCTTTCTTGACGGCCTGCTTGTCTCCATTATG
ATCACCTGTCGTGAAAGGGGTTTGTTTAGGGCAAAAGGCGTGCCAGTTTT
GTCGAAGGCAAATGACCTTGTAACTGGTAAGAATTTCTGCCATGAAAGAA
GCAAATGTTGTGAGAGAATCTCATTGCTCCTCTCGGGTGCTGGAAATCAG
GCAGCCCTGTCAGGAGTGGAGAGTGACAGGGGAAATACGAGGTCTAGTTC
CCAAAACATAATCGAAGCAACTTCTGCCCCTGGGTTGGTGAAGGCTGCAC
ATGCCTAAAACATGTGTCTCTCTCCCACTGCTCTTTTGTTACCCTCGCGT
TGCCTTGGAAACAGAGGAGGGTGACACCAAGGATGACCTCAAGCTGCCCG
ACTTCCCTGAAGGCTTCGGGAACGAGATCAAGACAAACTTCGATGAGGGG
AAGACTCTGGTGAGAAGTGCGGTCAGCATCACACCTATGCTCATACATGG
AAGGGGTGGGGGGGGTTTTGTGTCCCTAACCACAAGTGTTCAGAGGCAGG
AGGAGGTGGCTTCAGTTGATGTTTCCGCTCACATCCATTGTACCCGGGCC
TAGCTGCAACATTGTCACTAACCCTTCTTTTTTCCATTTCAAAAACCATT
TCAACCACCCCTCCCCACGTCCCCCCCCCACACACCTGCATGTCCTTCCC
TCTCGCCCTTATGTGTGCAATGAACAACAGGCTGTTACAGTCATGGCTGC
CATGGGTCACGAGCAGATTGTGGCCTACAAGGAAGAGGCTTGAGGCTGGG
ATGAGAAACCTGTTTCCTTCTTTGCACGTTGGGTGCATGGCCCACTTGAC
TGACTGTCAAGACCTGGTCGGCAGCGGGTGCAAAGGGGATTTGCTTGCAG
GGGGGTTGTGGTGGAGGGCAGCTAGTTGCTGTCACACCACCATTGCCGCA
CATGATTTGACAGAAAGGGTCCCCTCCCTACACATTCCCAACTCTAAAAT
CCTAAGATGGTCTTGTGCAGGAGACTAAAAATTCATCTACTGGTTTTCAG
GAAGCCCAGTGGGGAAGAGGGGGGAGGGGGGCGCATAAAGGCAAGGTGTG
AAATTAGCATAGACTCTGCACCTGGGGGTGGGCATGGGTCAAAGGGCGCA
TGTTGCTTGCGCCTTGTAATCAGTGTTTGCTGGGCTTGTTTGTTGCCTAC
CAAAGGAGAGGTTCACATGGCACAAGTCAGTCGGCGAGTATTTGGATTGG
GTAGCCAAGGGTTGTAGTGGGGGTGGGGGTGGAGGGCAGACTTTGGACAG
GTGGACGGGGGAGAACATGGATCTCAAATTGACGGTAAGGTATCCACATG
TTGAGAGTGGAGCGCTGAGGAAGTGTGGGTAATTGGAGGGTGGAGGGAAG
GAGAGTCATGGGCAGTGGTAGTGAGGTCAAAAGGAGCCCCATAGTAATTT
CTCTGTATGCCAAACCCTCATGGGCTAATGGTACAGAAAAGATTCTTGTG
TGGTTGGACTGGGGAGAGAGGTGATGAGTTGGTATGGGTGGGGGGTGGAG
AGGAGGGACTGAAAATCGGTGGCTGCGCTACCGCCTTTGCCGCTGGCGCA
TGTTATGTTAGGGCTAGGGTTACGGCATTTCTAACGAACAGAGAACAAAA
AAGAAAATAATAATTCCTATTCCACTGAGCTAGCTTTGCAGGGGTGAGAG
GCGGTGTATATCTGATAATCGATGATAAGGATAGCAAATCTAAGAAGGGG
CATACTGGGTCGTATGTAGTAGCTCTTGAGGGAGGGGGGGGAGTGTTCTG
ATCAAGGGAGATGTGGCCAGAAACAAATGGGCATTTTTACGGGCTCAAGG
CGGCGGAACGGTCAGTGACAGGGAGATCATGCATCAGAGCAAGTCATGTG
CAAGCAGGTCTTGCTGCTACCTCACTTCTCCCTCCACCTCCTGCAGCCCT
TGCATCACCCCCATCACTTCCATGTCTCATGGCTGGTTGGCTGGCACCAC
GTGGAGGCTGATTAACAGTTGTGAGAGGGCAACGGAGGGGGTAGAGGGGG
AGAGGGGAGATGAATTTGAACAACTGGCAGTTCCTATGAGCAGGTCATGC
AACACTTTTTATTTTTCCTGTTTTTTATTCTTTTTTTTCATGCAGCAAGG
GGTAACAAAGGAATGCTGGGTTGTGTCTCCGCTTTGATGAAGTCTTAAGG
TGGAGTAAGGAGTATGTGGATGGAGGAAGGGGCGATGGGTGGGCAAAAAG
AGGTAGACCCTTGTAGGGTCCCGTTGAGTCTTGCCCTCTGCCCACTGTGG
TTTCTTTTGGTGACCAAGCTTGCTGTTCTGGCATTCTGCATTGGGGACCC
AACCACTGGGGAGGCCAGATATCCCCGTCTCCTTTTGTCGCTCTTGTGGT
GACCCACCAGATACCTTCCCCTTCCCTATTAGTGTCTGCCGTCTTCTATG
CCTATGCACCATGCCCTACCCTTGTCTTGAATCCTGTGTTGTCCCTCCCA
ATGGCTGACAATCGAAGCAGCAACACTCTCTACCCACCATTATTTCGACA
GCCTCCCTTCCCCTCCCCCTTACTTTTGTTCAAACCTACAGTAGGCCCCC
TGCCAGAGGGGAAGGTAGCTTTGAATTAAGTCATTAGGTACTCTTAAGGG
GGGGCCCAAAGGGCACTGAAGTGGGTCAAGTGGCCTTGGACTGGAGCCTT
TCTGGGCACCTCATTTTTTCTCTGGGCCTGGGAGAAGTTAAGTTTTTGGT
TATGGGTGATGCTGAACTCCACAAGGAGTAAGCAAAAACAGCTCTGACGA
ACCGTGTGTGTGTTTGCTTGCTTTTGGTTTGTTTCTAACTAAGCGAGGAT
ATTTCGCCCAGATGTGGCGCCACACATATATACAAGCAGCCACCAGGCCG
TTCTTTTGGTTCCCATTTTGACCACCCCAGGGTGAGACCTTTGCGTCCAA
GCTGGCTGATGGTATCATTGCTTTTCTAATTTGTTGGGAGGAACAAGATA
GCAACTGCAAGTAGAAAGTTTGAAAATACATAGTAGACACCTCAAGTCAA
GAAAAGAGTGCCCAGGTCTCAAAACTACACAAGACAACAGAGTTACAGGT
CCAATAACTGTGACAAGGATGGTCATGAAACTTGACACAAGGATGGATCC
CAACCTAATCCCTAGCCCACACCCTACAAGAGAATGTGTGCCTGCTATTG
GAGGAACTTCATTACATACTTTTGCCGCATTTTGTTTTGTTTCAAAACGT
GCTCTTTAATTTTTGTATTAAAGAGCTGAAGCACTA

Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig104:26765..33850+

>mRNA_D-mesarthrocarpus_Contig104.8.1 ID=mRNA_D-mesarthrocarpus_Contig104.8.1|Name=mRNA_D-mesarthrocarpus_Contig104.8.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=483bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig104:26765..33850+ (Discosporangium mesarthrocarpum MT17_79)
ATGGCTGAGGACAAGCTCAATGACTATGACTTCTCGGGCACAGACGCCGG
TGCCTCACACACCATCCCCTCTGAAGCCGGGCAGATCCGGAAGGGCGGGT
ACATCGTGATCAAGGGCCACCCTTGCAAGGTGGTGAACGTCTCCACCTCC
AAGACAGGGAAACATGGTCACGCCAAGGCGAACTTCACCGCCACCGACAT
CTTCTCCGGGAAGAAGCTGGAAGATGTCATCCCCTCCACCCACACCACGT
CCGTCCCTGTGGTGAAGCGCAATGAGTACCAGCTCCTTGACATATCTGAC
GACGGCTTCTGCTCTCTTCTCACCGAGGAGGGTGACACCAAGGATGACCT
CAAGCTGCCCGACTTCCCTGAAGGCTTCGGGAACGAGATCAAGACAAACT
TCGATGAGGGGAAGACTCTGGCTGTTACAGTCATGGCTGCCATGGGTCAC
GAGCAGATTGTGGCCTACAAGGAAGAGGCTTGA