mRNA_D-mesarthrocarpus_Contig10399.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10399.1.1 vs. uniprot
Match: A0A6H5L6F7_9PHAE (Importin N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6F7_9PHAE) HSP 1 Score: 230 bits (587), Expect = 1.440e-67 Identity = 115/142 (80.99%), Postives = 124/142 (87.32%), Query Frame = 1
Query: 1 PMRGAQAMQSIVLLSSVRRSLFTKEPERGAYLQQLITFIREILASNHGLHHQENYHQFCRQLGRLKANYQARPTWPLSELVRVDGYLEWIGLAADFTVRSFEEWQWSTNSIHYLLSLWGRLVAAVPYVRVDAGAKSHTETLQ 426
P R +QAMQSIVLLSSVRRSLF KE +R AYLQQL+ FIREIL +N GLHH +NYHQFCRQLGRLKANYQ LSELVRV+GYLEW+ LAADFTVRS +EWQWSTNSIHYLL+LWGRLVAAVPYVR DAGAKSHTETLQ
Sbjct: 270 PPRSSQAMQSIVLLSSVRRSLFAKETDRAAYLQQLMNFIREILQTNQGLHHPDNYHQFCRQLGRLKANYQ------LSELVRVEGYLEWVELAADFTVRSLKEWQWSTNSIHYLLALWGRLVAAVPYVRADAGAKSHTETLQ 405
BLAST of mRNA_D-mesarthrocarpus_Contig10399.1.1 vs. uniprot
Match: A0A835YUW2_9STRA (RAN binding protein 16-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUW2_9STRA) HSP 1 Score: 205 bits (522), Expect = 1.210e-58 Identity = 98/142 (69.01%), Postives = 119/142 (83.80%), Query Frame = 1
Query: 1 PMRGAQAMQSIVLLSSVRRSLFTKEPERGAYLQQLITFIREILASNHGLHHQENYHQFCRQLGRLKANYQARPTWPLSELVRVDGYLEWIGLAADFTVRSFEEWQWSTNSIHYLLSLWGRLVAAVPYVRVDAGAKSHTETLQ 426
P R + AMQS++LLSSVRRSLF K+ +R A+LQ L+ F+R+IL++ GL HQENYH+FCRQLGRLKANYQ LSELVRVDGYLEW+ LAA FTV+SF+EWQWS NS+HYLL+LWGRLV+AVPYVR + GAK+HT+ LQ
Sbjct: 273 PPRSSLAMQSVILLSSVRRSLFPKDADRAAFLQLLMDFLRDILSTQQGLQHQENYHEFCRQLGRLKANYQ------LSELVRVDGYLEWVELAASFTVKSFQEWQWSANSVHYLLALWGRLVSAVPYVRPEVGAKNHTQRLQ 408
BLAST of mRNA_D-mesarthrocarpus_Contig10399.1.1 vs. uniprot
Match: A0A6U5EJC1_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5EJC1_9STRA) HSP 1 Score: 186 bits (471), Expect = 9.560e-52 Identity = 88/142 (61.97%), Postives = 111/142 (78.17%), Query Frame = 1
Query: 1 PMRGAQAMQSIVLLSSVRRSLFTKEPERGAYLQQLITFIREILASNHGLHHQENYHQFCRQLGRLKANYQARPTWPLSELVRVDGYLEWIGLAADFTVRSFEEWQWSTNSIHYLLSLWGRLVAAVPYVRVDAGAKSHTETLQ 426
P ++AM++++LL+S RRSLF + +R A+L+ ++ IREI+AS GL HQ+NYHQFCR LGR+KANYQ LSELV+ +GY+EW+GLA+ FTV S E WQWSTNSIHYLL+LWGRLVAAVPYVR D GAK H E L+
Sbjct: 270 PPCSSRAMEAVILLASCRRSLFPSDKDRAAFLEIIMRSIREIMASRAGLQHQQNYHQFCRLLGRIKANYQ------LSELVKAEGYIEWLGLASSFTVTSMENWQWSTNSIHYLLALWGRLVAAVPYVRADTGAKGHPEALE 405
BLAST of mRNA_D-mesarthrocarpus_Contig10399.1.1 vs. uniprot
Match: A0A1E7FRK9_9STRA (Importin N-terminal domain-containing protein n=2 Tax=Bacillariaceae TaxID=33852 RepID=A0A1E7FRK9_9STRA) HSP 1 Score: 181 bits (460), Expect = 2.880e-50 Identity = 89/142 (62.68%), Postives = 113/142 (79.58%), Query Frame = 1
Query: 1 PMRGAQAMQSIVLLSSVRRSLFTKEPERGAYLQQLITFIREILASNHGLHHQENYHQFCRQLGRLKANYQARPTWPLSELVRVDGYLEWIGLAADFTVRSFEEWQWSTNSIHYLLSLWGRLVAAVPYVRVDAGAKSHTETLQ 426
P R ++AM++I+LL+SVRRSLF + +R A+L +LIT IRE+L++ GL HQ+NYHQFCR LGRLKANYQ LSELV+ +GY+EW+ LAA FTV+S WQ+STNSIHYLLSLWGRLVAAVPYVR + GA+ H + L+
Sbjct: 276 PPRSSKAMEAIILLASVRRSLFPTDKDRAAFLGRLITGIREMLSNQTGLQHQDNYHQFCRLLGRLKANYQ------LSELVKTNGYMEWLELAASFTVQSIRNWQYSTNSIHYLLSLWGRLVAAVPYVRPETGAQGHVQHLE 411
BLAST of mRNA_D-mesarthrocarpus_Contig10399.1.1 vs. uniprot
Match: B8C1X0_THAPS (Importin N-terminal domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1X0_THAPS) HSP 1 Score: 178 bits (451), Expect = 4.700e-49 Identity = 87/142 (61.27%), Postives = 109/142 (76.76%), Query Frame = 1
Query: 1 PMRGAQAMQSIVLLSSVRRSLFTKEPERGAYLQQLITFIREILASNHGLHHQENYHQFCRQLGRLKANYQARPTWPLSELVRVDGYLEWIGLAADFTVRSFEEWQWSTNSIHYLLSLWGRLVAAVPYVRVDAGAKSHTETLQ 426
P R ++AM++++LL SVRRSLF + ER A+L +++ IRE+L + GL HQ+NYHQFCR LGRLKANYQ LSELV+ +GYLEW+ LAA FT +S WQ+STNSIHYLL+LWGRLV+AVPYVR DAG K H + LQ
Sbjct: 275 PPRSSKAMEAVILLCSVRRSLFPSDKEREAFLGRVMAGIRELLKNQTGLQHQDNYHQFCRLLGRLKANYQ------LSELVKTEGYLEWLELAASFTTQSIRNWQYSTNSIHYLLALWGRLVSAVPYVRPDAGNKGHVQALQ 410
BLAST of mRNA_D-mesarthrocarpus_Contig10399.1.1 vs. uniprot
Match: A0A7S2L6Z5_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L6Z5_9STRA) HSP 1 Score: 178 bits (451), Expect = 4.810e-49 Identity = 87/142 (61.27%), Postives = 110/142 (77.46%), Query Frame = 1
Query: 1 PMRGAQAMQSIVLLSSVRRSLFTKEPERGAYLQQLITFIREILASNHGLHHQENYHQFCRQLGRLKANYQARPTWPLSELVRVDGYLEWIGLAADFTVRSFEEWQWSTNSIHYLLSLWGRLVAAVPYVRVDAGAKSHTETLQ 426
P R ++AM++++LL SVRRS+F + ER A+L ++I IRE+L+S GL HQ+NYHQFCR LGRLKANYQ LSELV+VDGY +W+ LA FTV S E WQ+STNSIHYLL+LW RLVAAVPYVR D GA+ H++ L+
Sbjct: 275 PPRSSKAMEAVILLCSVRRSVFPSDKERTAFLGRVIAGIRELLSSQTGLQHQDNYHQFCRLLGRLKANYQ------LSELVKVDGYTDWLELAMSFTVTSMENWQYSTNSIHYLLALWSRLVAAVPYVRPDTGAQGHSQALE 410
BLAST of mRNA_D-mesarthrocarpus_Contig10399.1.1 vs. uniprot
Match: K0RJV1_THAOC (Importin N-terminal domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RJV1_THAOC) HSP 1 Score: 177 bits (448), Expect = 1.220e-48 Identity = 87/142 (61.27%), Postives = 108/142 (76.06%), Query Frame = 1
Query: 1 PMRGAQAMQSIVLLSSVRRSLFTKEPERGAYLQQLITFIREILASNHGLHHQENYHQFCRQLGRLKANYQARPTWPLSELVRVDGYLEWIGLAADFTVRSFEEWQWSTNSIHYLLSLWGRLVAAVPYVRVDAGAKSHTETLQ 426
P R +AM++++L+ SVRRSLF + ER A+L ++I IRE+L + GL HQ+NYHQFCR LGRLKANYQ LSELV+ +GYLEW+ LAA FT +S WQ+STNSIHYLL+LWGRLVAAVPYVR D GAK H + L+
Sbjct: 274 PPRSNKAMEAVILICSVRRSLFPSDKEREAFLGRIIGGIRELLKNQTGLQHQDNYHQFCRLLGRLKANYQ------LSELVKTEGYLEWLELAARFTTQSIRNWQYSTNSIHYLLALWGRLVAAVPYVRPDTGAKGHVQALE 409
BLAST of mRNA_D-mesarthrocarpus_Contig10399.1.1 vs. uniprot
Match: B7FRZ4_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FRZ4_PHATC) HSP 1 Score: 175 bits (443), Expect = 5.710e-48 Identity = 84/142 (59.15%), Postives = 111/142 (78.17%), Query Frame = 1
Query: 1 PMRGAQAMQSIVLLSSVRRSLFTKEPERGAYLQQLITFIREILASNHGLHHQENYHQFCRQLGRLKANYQARPTWPLSELVRVDGYLEWIGLAADFTVRSFEEWQWSTNSIHYLLSLWGRLVAAVPYVRVDAGAKSHTETLQ 426
P + ++AM++++LLSSVRRSLF + +R +L +LIT IRE++++ GL HQ+NYHQFCR LGRLKANYQ LSELV+ DGYLEW+ LAA FTV+S + WQ+STNSIHYLL+LW RLV+AVPY+R + GA+ H L+
Sbjct: 268 PPQSSKAMEALILLSSVRRSLFPTDKDRAVFLGRLITGIREMMSNRTGLQHQDNYHQFCRLLGRLKANYQ------LSELVKADGYLEWLELAATFTVQSVQNWQYSTNSIHYLLALWARLVSAVPYIRPETGARGHVAHLE 403
BLAST of mRNA_D-mesarthrocarpus_Contig10399.1.1 vs. uniprot
Match: A0A1Z5KF71_FISSO (Importin N-terminal domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KF71_FISSO) HSP 1 Score: 174 bits (442), Expect = 7.840e-48 Identity = 83/144 (57.64%), Postives = 114/144 (79.17%), Query Frame = 1
Query: 1 PMRGAQAMQSIVLLSSVRRSLFTKEPERGAYLQQLITFIREILASNHGLHHQENYHQFCRQLGRLKANYQARPTWPLSELVRVDGYLEWIGLAADFTVRSFEEWQWSTNSIHYLLSLWGRLVAAVPYVRVDAGAKSHTETLQVR 432
P + ++AM++++L+SSVRRSLF + ER A+L +LI IR++L + GL+HQ+NYH+FCR LGRLKANYQ L+ELV+ +GYLEW+ LAA+FT +S E WQ+STNSIHYLL+LW RLVAA+PYVR +AG +SH + L+ +
Sbjct: 276 PPQSSKAMEALILISSVRRSLFPTDKERAAFLSKLIDGIRKLLLNRTGLNHQDNYHEFCRLLGRLKANYQ------LNELVKTEGYLEWLELAANFTQQSLENWQYSTNSIHYLLALWARLVAAMPYVRAEAGTRSHADHLKTQ 413
BLAST of mRNA_D-mesarthrocarpus_Contig10399.1.1 vs. uniprot
Match: A0A7S4D8M4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8M4_HETAK) HSP 1 Score: 163 bits (413), Expect = 3.700e-47 Identity = 76/124 (61.29%), Postives = 98/124 (79.03%), Query Frame = 1
Query: 55 RSLFTKEPERGAYLQQLITFIREILASNHGLHHQENYHQFCRQLGRLKANYQARPTWPLSELVRVDGYLEWIGLAADFTVRSFEEWQWSTNSIHYLLSLWGRLVAAVPYVRVDAGAKSHTETLQ 426
RSL + +RG +LQ++++ IRE+L GL HQ+NYH+FCR LGRLKANYQ LSELVR +GY+EW+ LA+ F+V+SF++WQWSTNS+HYLL+LWGRLVAAVPYVR DAG ++H LQ
Sbjct: 1 RSLLPTDKDRGVFLQRMMSGIREVLRDRTGLQHQDNYHEFCRLLGRLKANYQ------LSELVRTEGYVEWLELASAFSVQSFQQWQWSTNSVHYLLALWGRLVAAVPYVRPDAGGRAHLPALQ 118 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10399.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10399.1.1 >prot_D-mesarthrocarpus_Contig10399.1.1 ID=prot_D-mesarthrocarpus_Contig10399.1.1|Name=mRNA_D-mesarthrocarpus_Contig10399.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=143bp MRGAQAMQSIVLLSSVRRSLFTKEPERGAYLQQLITFIREILASNHGLHHback to top mRNA from alignment at D-mesarthrocarpus_Contig10399:29..1132- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10399.1.1 ID=mRNA_D-mesarthrocarpus_Contig10399.1.1|Name=mRNA_D-mesarthrocarpus_Contig10399.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1104bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10399:29..1132- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10399:29..1132- >mRNA_D-mesarthrocarpus_Contig10399.1.1 ID=mRNA_D-mesarthrocarpus_Contig10399.1.1|Name=mRNA_D-mesarthrocarpus_Contig10399.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=429bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10399:29..1132- (Discosporangium mesarthrocarpum MT17_79)back to top |