mRNA_D-mesarthrocarpus_Contig10392.1.2 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10392.1.2
Unique NamemRNA_D-mesarthrocarpus_Contig10392.1.2
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10392.1.2 vs. uniprot
Match: A0A835YIR1_9STRA (SET domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIR1_9STRA)

HSP 1 Score: 245 bits (626), Expect = 4.500e-75
Identity = 123/236 (52.12%), Postives = 159/236 (67.37%), Query Frame = 1
Query:  313 EVMLEVSSELCLWSTRDGVISGLYGQTEMCWEAAGDLREPVSDNDFLRGMTWDVRLAVALLEATADPQVGGQFWDLYSRLLPDPHTVSVPFCLPERLLAQLHNKGMAEGARRQKERLTRLYPALMQTLLSHRITAPYSGISTTVGASGGGQEGPGRDRGGRAVGGGVDPGIPMALTWAFAMVRSRAFGAGEERFALVPFLDMANHEFNPSANFTFE-APGVFRMRALRDISSGEEV 1017
            E +L +   LCLWS RDGV+ GL GQT++CW+ AGDLR+PV D  + +G+TWDVRLA+AL +ATAD  VGGQFWDLY RLLP PH V+VP CLP  LL ++ +  +A  A+ QK+RL+ L+P +MQT ++H  TA YS                       A+G GV   +P AL WAFA+VRSRAF AG ++FA VPFLDMANH  NP+ANFTF+ A G F++ AL D+ +  +V
Sbjct:    8 EDVLVIPGNLCLWSNRDGVVGGLQGQTDLCWDQAGDLRDPVDDTSYAKGLTWDVRLALALQDATADIAVGGQFWDLYGRLLPAPHEVTVPLCLPSALLKEMQHAQLARRAQAQKDRLSGLFPLMMQTHMAHPRTACYS-----------------------ALGPGVLQSLPFALQWAFALVRSRAFSAGNDQFAFVPFLDMANHNSNPNANFTFDSAIGSFKLTALTDVKADSQV 220          
BLAST of mRNA_D-mesarthrocarpus_Contig10392.1.2 vs. uniprot
Match: D7FNM5_ECTSI (SET domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNM5_ECTSI)

HSP 1 Score: 213 bits (543), Expect = 4.070e-62
Identity = 115/192 (59.90%), Postives = 137/192 (71.35%), Query Frame = 1
Query:  460 MTWDVRLAVALLEATADPQVGGQFWDLYSRLLPDPHTVSVPFCLPERLLAQLHNKGMAEGARRQKERLTRLYPALMQTLLSHRITAPYSGISTTVGASGGGQEGPGRDRGGRAVGGGVDPGIPMALTWAFAMVRSRAFGAGEERFALVPFLDMANHEF-NPSANFTF-----EAPGVFRMRALRDISSGEEV 1017
            MTWDVRLA+ALLEAT+DPQVGG+FW +Y RLLP PHTV+VPFCLPERLL QLHN GMAE AR+Q ER+  LYP LM+TLLSH  TA Y+   T  G +             +         +PMAL WAFAMVRSRAF A  +RFA VPFLDMANH F +P+ANFT+       PGVF+++A+R+IS+GEEV
Sbjct:    1 MTWDVRLALALLEATSDPQVGGKFWHVYGRLLPQPHTVTVPFCLPERLLGQLHNSGMAERARKQVERVRSLYPDLMRTLLSHPKTAVYATRKTAEGEAAAAAGETATAAATKEAAEKETDAVPMALLWAFAMVRSRAFAADGDRFAFVPFLDMANHGFADPAANFTYISGGESQPGVFQLQAMRNISAGEEV 192          
BLAST of mRNA_D-mesarthrocarpus_Contig10392.1.2 vs. uniprot
Match: A0A7S4D535_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D535_HETAK)

HSP 1 Score: 182 bits (463), Expect = 9.010e-50
Identity = 107/287 (37.28%), Postives = 155/287 (54.01%), Query Frame = 1
Query:  196 VTQESELFEWMSKNFGVEKKVSLRGERRGLFVEQDIGE-----------GEVMLEVSSELCLWSTRDGVIS-GLYGQTEMCWEAAGDLREPVSDNDFLRGMTWDVRLAVALLEATADPQVGGQFWDLYSRLLPDPHTVSVPFCLPERLLAQLHNKGMAEGARRQKERLTRLYPALMQTLLSHRITAPYSGISTTVGASGGGQEGPGRDRGGRAVGGGVDPGIPMALTWAFAMVRSRAFGAGEERFALVPFLDMANHEFNPSANFTF-EAPGVFRMRALRDISSGEEV 1017
            +T+   L+E ++   GVE +  L        VE  +G+           GE++L +   LC+W+ RDG I  GL GQ++M W  AGDLR    D    +G+TWD+RLAVALLEA ++ +  G FWD+Y  +LP PHTV++P C P+ L A++ N  M + A +Q+ RL   YP L++     ++   Y  +                         G+   +P AL W FA+VRSR F A  ERFA VPFLDM NH   P+A++++ EA   F + AL+ I SG+E+
Sbjct:   73 LTEMESLWETLTAREGVESRCRL--------VESTVGDRTVAATAAALPGEMLLSIPGRLCIWANRDGTIDRGLDGQSDMTWAVAGDLRADYPDLLRAQGLTWDLRLAVALLEAASEQRCAGGFWDVYGFMLPAPHTVTMPLCFPQELTAEVQNPFMMKAAGQQQVRLESHYPTLVKPNYHPKLKI-YQDL-------------------------GMTSSVPNALMWCFALVRSRCFSASPERFAFVPFLDMCNHWVKPNADYSYNEATDSFDLVALKPIRSGDEI 325          
BLAST of mRNA_D-mesarthrocarpus_Contig10392.1.2 vs. uniprot
Match: R1CZ63_EMIHU (SET domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CZ63_EMIHU)

HSP 1 Score: 179 bits (454), Expect = 5.790e-49
Identity = 115/258 (44.57%), Postives = 143/258 (55.43%), Query Frame = 1
Query:  256 VSLRGERRG---LFVEQDIGEGEVMLEVSSELCLWSTRDGVISGLYGQTEMCWEAAGDLREPVSDNDFLRGMTWDVRLAVALLEATADPQVGGQFWDLYSRLLPDPHTVSVPFCLPERLLAQLHNKGMAEGARRQKERLTRLYPALMQTLLSHRITAPYSGISTTVGASGGGQEGPGRDRGGRAVGGGVDPGIPMALTWAFAMVRSRAFG-AGEERFALVPFLDMANHEFNPSANFTFEAPGVFRMRALRDISSGEEV 1017
            V+LR +  G   L   +D+G  EV L V   L L + R G I GL GQT++ W+AAGDLRE V +  F RG TWDVRLA+A+LEATA    GG+ WD Y R LP PH +S P CLP  LLA+L    +A  A  + E L  LY  LM    +H  TA Y                    RGG A  G V    P  L+WA+A+V SR F  +G + F  VPFLDM  H   PSANFT +  G+  +R LR +++GEEV
Sbjct:   68 VALRSDGPGGRTLVAARDLGSNEVALAVPRRLLLTAHRSGAIGGLAGQTDLVWDAAGDLREEVGEAMFKRGATWDVRLALAVLEATAG--CGGELWDAYRRFLPLPHELSSPVCLPAELLAELREPAVASAAAARNELLADLYAPLMAHE-AHPATAGYVA------------------RGGEAARGLV----PAPLSWAYALVSSRCFALSGGDTFGFVPFLDMCQHSAVPSANFTSDERGIV-LRTLRPVAAGEEV 299          
BLAST of mRNA_D-mesarthrocarpus_Contig10392.1.2 vs. uniprot
Match: A0A7S0NTJ5_9EUKA (Hypothetical protein n=2 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NTJ5_9EUKA)

HSP 1 Score: 162 bits (410), Expect = 1.420e-42
Identity = 108/281 (38.43%), Postives = 149/281 (53.02%), Query Frame = 1
Query:  193 RVTQESELFEWMSKNF-GVEKKVSLRGER----RGLFVEQDIGEGEVMLEVSSELCLWSTRDGVISGLYGQTEMCWEAAGDLREPVSDNDFLRGMTWDVRLAVALLEATADPQVGGQFWDLYSRLLPDPHTVSVPFCLPERLLAQLHNKGMAEGARRQKERLTRLYPALMQTLLSHRITAPYSGISTTVGASGGGQEGPGRDRGGRAVGGGVDPGIPMALTWAFAMVRSRAFG-AGEERFALVPFLDMANHEFNPSANFTFEAPGVFRMRALRDISSGEEV 1017
            R   ++ LF+ + +   G   +V+L+G R    RGLF   D+  GE +L V SELCL + R GVI GL GQT+   +AAGDLR+ V +  F +G TWDVRLA+A+ EATA    GG FWD Y RLLP P   +    LP  LL +L +  + +    +   L  LYP+L  T   H +T+ Y+ +   +                          +P+ L W +++V SR F  A E+ FA VPFLDM  H  +PSANFT  + G F +  LR + +GE V
Sbjct:    5 RADAQAALFDMLLRQAEGRPPRVTLQGGRGESGRGLFSTADLDAGEEILRVPSELCLTAHRSGVIGGLIGQTDAMVDAAGDLRDEVGEEAFNQGATWDVRLALAVFEATAG--CGGPFWDEYRRLLPLPPFATAAASLPPVLLEELQDPVLQKRGLAKDALLRELYPSLA-THSVHPVTSSYAAMDAPLEL------------------------VPLPLQWTYSLVVSRCFAMADEDTFAFVPFLDMCQHSASPSANFT-SSDGDFVLSTLRRMQAGEAV 257          
BLAST of mRNA_D-mesarthrocarpus_Contig10392.1.2 vs. uniprot
Match: A0A7S4F9T8_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F9T8_CHRCT)

HSP 1 Score: 159 bits (401), Expect = 1.330e-41
Identity = 107/289 (37.02%), Postives = 147/289 (50.87%), Query Frame = 1
Query:  178 IAARDRVTQESELFEWMSKNFGV----EKKVSLRGER----RGLFVEQDIGEGEVMLEVSSELCLWSTRDGVISGLYGQTEMCWEAAGDLREPVSDNDFLRGMTWDVRLAVALLEATADPQVGGQFWDLYSRLLPDPHTVSVPFCLPERLLAQLHNKGMAEGARRQKERLTRLYPALMQTLLSHRITAPYSGISTTVGASGGGQEGPGRDRGGRAVGGGVDPGIPMALTWAFAMVRSRAFGAGE-ERFALVPFLDMANHEFNPSANFTFEAPGVFRMRALRDISSGEEV 1017
            + +      E  LF  ++  + +     + V LRG R    RGLF  +   +GEV++ V  +L L + R GV+SGL GQT++  +AAGDLR  V +  F RG TWDVRLA+A+ EATA    GG FWD Y +LLP P        LPE L+ +L +  + + A+++   L  LYPAL Q   +H  TA Y  +   +                          IP  L W  +MV SR F   + + FA VPFLDM  H   P+ANF+    G F + ALR I +GEE+
Sbjct:   89 VLSETAAVAEDPLFAQLAVEYNILPSGSESVVLRGGRGDDSRGLFAGKSFEQGEVLVRVPRDLLLTAHRSGVVSGLIGQTDVMLDAAGDLRSEVGEKMFERGATWDVRLALAVFEATAG--CGGPFWDRYRQLLPLPPFSMSAASLPEFLIDELQDPVLEQRAKQKASMLVSLYPALSQHA-AHPATAMYIRMGAPLEM------------------------IPSPLAWCHSMVVSRCFSMADVDTFAFVPFLDMCQHAEAPTANFS-SVSGDFELTALRPIEAGEEI 349          
BLAST of mRNA_D-mesarthrocarpus_Contig10392.1.2 vs. uniprot
Match: A0A0M0JQY2_9EUKA (Ribulose-bisphosphate carboxylase oxygenase large subunit n-chloroplast n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JQY2_9EUKA)

HSP 1 Score: 155 bits (393), Expect = 7.570e-40
Identity = 97/260 (37.31%), Postives = 138/260 (53.08%), Query Frame = 1
Query:  256 VSLRGERRG-----LFVEQDIGEGEVMLEVSSELCLWSTRDGVISGLYGQTEMCWEAAGDLREPVSDNDFLRGMTWDVRLAVALLEATADPQVGGQFWDLYSRLLPDPHTVSVPFCLPERLLAQLHNKGMAEGARRQKERLTRLYPALMQTLLSHRITAPYSGISTTVGASGGGQEGPGRDRGGRAVGGGVDPGIPMALTWAFAMVRSRAFGAGE-ERFALVPFLDMANHEFNPSANFTFEAPGVFRMRALRDISSGEEV 1017
            ++L G  RG     L   + + +G+++L V + L L + R G I GL GQTE+ WEAAGDLRE V +  F RG TWDVRLA+A+ EATA     G FWD Y +L+P P +++ P CLP+ +L +L N  +    + ++     L+P+L     +H +TA Y+     +                          IP  L +A+A+V SR F   + + FA VPFLDMA H   P+ANF  +A     + AL D+  GEEV
Sbjct:   62 ITLEGSARGSGGRRLVTRRAVSKGDIVLSVPASLLLTAHRSGRIGGLQGQTEVMWEAAGDLREEVGEELFQRGATWDVRLALAVYEATAGG--AGGFWDDYRKLMPPPPSMTHPLCLPQAMLPELQNVELQAKVQAKRALFQDLHPSL-HAHATHPVTASYTNRGFPMEY------------------------IPRPLPYAYALVVSRCFAMADGDTFAFVPFLDMAQHADVPTANFRVDAQDGATLTALADLKPGEEV 294          
BLAST of mRNA_D-mesarthrocarpus_Contig10392.1.2 vs. uniprot
Match: A0A7S2MSJ8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MSJ8_9STRA)

HSP 1 Score: 134 bits (336), Expect = 5.640e-32
Identity = 102/257 (39.69%), Postives = 134/257 (52.14%), Query Frame = 1
Query:  277 RGLFVEQDIGEGEVMLEVSSELCLWSTRDGVISGLYGQTEMCWEAAGDLREPVSDNDFLRGMTWDVRLAVALLEATADPQVG--GQFWDLYSRLLPDPHT-VSVPFCLPERLLAQLHNKGMAEGARRQKERLTRLYPALMQTLLSHRITAPYSGISTTVGASGGGQEGPGRDRGGRAVGGGVDPGIPMALTWAFAMVRSRAFGAGEE--RFALVPFLDMANHEFNPSANFTFEA---PGV--FRMRALRDISSGEEV 1017
            RGL   +D+  GE +L V  E CL   R G +SGL GQT++  E AGDLRE +   D  R +TWD+RLA+ LLEAT+   +G  G+ WD Y  LLP  H    +P  LP  LL +L +  +   A R          AL+Q +L    T P+       GA+GG    P R +                L WA A V SR+F  G++   FA VPF D+ANH+  P+ NFT E     GV  F ++AL+DI +GEEV
Sbjct:   63 RGLIANRDLRIGETVLAVPIEACLCVQRRGSVSGLQGQTDLTMEVAGDLREELP-GDAWRTITWDIRLALGLLEATSGNNLGTPGELWDGYFHLLPPLHRGPHIPLVLPPALLPELQDLELTRRAERMS--------ALLQDILPE-CTDPFC---HPAGANGG----PPRMQ-------------SSPLHWALAQVWSRSFTCGDDIDSFAFVPFFDLANHKDIPNTNFTTEIHPEAGVECFVLKALQDIGAGEEV 289          
BLAST of mRNA_D-mesarthrocarpus_Contig10392.1.2 vs. uniprot
Match: A0A7S3SFS5_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3SFS5_9SPIT)

HSP 1 Score: 112 bits (280), Expect = 3.400e-26
Identity = 78/186 (41.94%), Postives = 97/186 (52.15%), Query Frame = 1
Query:  463 TWDVRLAVALLEATADPQVGGQFWDLYSRLLPDPHTVSVPFCLPERLLAQLHNKGMAEGARRQKERLTRLYPALMQTLLSHRITAPYSGISTTVGASGGGQEGPGRDRGGRAVGGGVDPGIPMALTWAFAMVRSRAFGA-GEERFALVPFLDMANHEFNPSANFTFEAPGVFRMRALRDISSGEEV 1017
            TWDVRLA+A++EATA    GG FWD Y +LLP P  VS   CLP   +  L +  + + A   + RL +LYP L  TL +H  T  Y                  +  G  AVG      IP  L W  A+V SR F    E+ FA  PFLDMANH   P+ANFT    G   + ALRD+S+G+EV
Sbjct:    2 TWDVRLALAVMEATAG--AGGPFWDGYRQLLPLPPHVSNAACLPVGFIPMLCDAVLEKQAHDTRARLRKLYPTL-HTLSAHPATGFYE-----------------QRFGEEAVGY-----IPSPLDWCHALVVSRCFSTVDEDTFAFTPFLDMANHAETPTANFTTGPDGSMHLYALRDMSAGDEV 162          
BLAST of mRNA_D-mesarthrocarpus_Contig10392.1.2 vs. uniprot
Match: E1Z6K7_CHLVA (SET domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z6K7_CHLVA)

HSP 1 Score: 105 bits (261), Expect = 1.490e-21
Identity = 81/253 (32.02%), Postives = 112/253 (44.27%), Query Frame = 1
Query:  280 GLFVEQDIGEGEVMLEVSSELCLWSTRDGVISGLYGQTEMCWEAAGDLREPVSDNDFLRG------MTWDVRLAVALLEATADPQVGGQFWDLYSR-LLPDPHTVSVPFCLPERLLAQLHNKGMAEGARRQKERLTRLYPALMQTLLSHRITAPYSGISTTVGASGGGQEGPGRDRGGRAVGGGVDPGIPMALTWAFAMVRSRAFGAGEERFALVPFLDMANHEFNPSANFTFEA-PGVFRMRALRDISSGEE 1014
            GLF+     +G+V+L V + LCL                    AAG    P +     RG      + WD+ LA+ALL++ +    G  FW+ YS  +LP P  +++P CLP RLL QL +  +A GA  Q+ERL  L+P L                                       GG +    P  L W F  VRSRAF   +E FA VP LD+ANH  +PS +F   A  G   + A++D+  G+E
Sbjct:   55 GLFLTAAASQGDVVLRVPTSLCLAVDY----------------AAGLRLPPGAWPRLQRGVQKDAALPWDILLALALLDSLSGG--GDAFWERYSNAVLPQPLDLTLPLCLPPRLLPQLQHAAIAAGAAAQQERLAGLFPGL---------------------------------------GGSMSEDGPTWLQWGFGCVRSRAFRLADEHFAFVPLLDVANHAADPSCDFRLNAGEGCVELVAVKDLQPGQE 250          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10392.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YIR1_9STRA4.500e-7552.12SET domain-containing protein n=1 Tax=Tribonema mi... [more]
D7FNM5_ECTSI4.070e-6259.90SET domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S4D535_HETAK9.010e-5037.28Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
R1CZ63_EMIHU5.790e-4944.57SET domain-containing protein n=1 Tax=Emiliania hu... [more]
A0A7S0NTJ5_9EUKA1.420e-4238.43Hypothetical protein n=2 Tax=Calcidiscus leptoporu... [more]
A0A7S4F9T8_CHRCT1.330e-4137.02Hypothetical protein (Fragment) n=1 Tax=Chrysotila... [more]
A0A0M0JQY2_9EUKA7.570e-4037.31Ribulose-bisphosphate carboxylase oxygenase large ... [more]
A0A7S2MSJ8_9STRA5.640e-3239.69Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3SFS5_9SPIT3.400e-2641.94Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
E1Z6K7_CHLVA1.490e-2132.02SET domain-containing protein n=1 Tax=Chlorella va... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10392contigD-mesarthrocarpus_Contig10392:14..2104 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FNM5
PFAMsRubis-subs-bind,SET
Model size1017
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons5
Evalue5.88e-63
EggNOG OGsKOG1337@1|root,KOG1337@2759|Eukaryota
Ec32 ortholog descriptionSET domain protein
Ec32 orthologEc-01_004930.1
Descriptionpeptidyl-lysine monomethylation
Cds size1005
COG categoryI
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10392.1.2prot_D-mesarthrocarpus_Contig10392.1.2Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10392 14..2092 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789177.9096942-CDS-D-mesarthrocarpus_Contig10392:13..1181680789177.9096942-CDS-D-mesarthrocarpus_Contig10392:13..118Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10392 14..118 -
1680789177.9251366-CDS-D-mesarthrocarpus_Contig10392:534..8701680789177.9251366-CDS-D-mesarthrocarpus_Contig10392:534..870Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10392 535..870 -
1680789177.9352999-CDS-D-mesarthrocarpus_Contig10392:1243..14441680789177.9352999-CDS-D-mesarthrocarpus_Contig10392:1243..1444Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10392 1244..1444 -
1680789177.9544187-CDS-D-mesarthrocarpus_Contig10392:1614..16741680789177.9544187-CDS-D-mesarthrocarpus_Contig10392:1614..1674Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10392 1615..1674 -
1680789177.97171-CDS-D-mesarthrocarpus_Contig10392:1789..20921680789177.97171-CDS-D-mesarthrocarpus_Contig10392:1789..2092Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10392 1790..2092 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789177.9846294-UTR-D-mesarthrocarpus_Contig10392:2092..21041680789177.9846294-UTR-D-mesarthrocarpus_Contig10392:2092..2104Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10392 2093..2104 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10392.1.2

>prot_D-mesarthrocarpus_Contig10392.1.2 ID=prot_D-mesarthrocarpus_Contig10392.1.2|Name=mRNA_D-mesarthrocarpus_Contig10392.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=335bp
MAPRGRSLVISGLVSVLISSPHCQGFVSVVRTLPMTQRGVAERWCLRGTP
GDNDRIAARDRVTQESELFEWMSKNFGVEKKVSLRGERRGLFVEQDIGEG
EVMLEVSSELCLWSTRDGVISGLYGQTEMCWEAAGDLREPVSDNDFLRGM
TWDVRLAVALLEATADPQVGGQFWDLYSRLLPDPHTVSVPFCLPERLLAQ
LHNKGMAEGARRQKERLTRLYPALMQTLLSHRITAPYSGISTTVGASGGG
QEGPGRDRGGRAVGGGVDPGIPMALTWAFAMVRSRAFGAGEERFALVPFL
DMANHEFNPSANFTFEAPGVFRMRALRDISSGEEV
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mRNA from alignment at D-mesarthrocarpus_Contig10392:14..2104-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10392.1.2 ID=mRNA_D-mesarthrocarpus_Contig10392.1.2|Name=mRNA_D-mesarthrocarpus_Contig10392.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2091bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10392:14..2104- (Discosporangium mesarthrocarpum MT17_79)
TACACAACCAAAATGGCCCCTCGGGGTAGATCTCTGGTTATCAGCGGCCT CGTCTCTGTCCTAATCAGCTCTCCTCATTGTCAAGGATTTGTATCTGTGG TGCGCACATTGCCGATGACTCAGCGAGGTGTAGCGGAGCGCTGGTGTTTG AGAGGCACACCAGGGGACAATGACAGGATAGCTGCTCGGGACAGGGTTAC ACAGGAAAGCGAGCTGTTTGAATGGATGTCGAAAAATTTTGGGGTTGAAA AAAAGGTTTCTCTACGGGGAGAGAGGAGGGGCCTTTTCGTCGAGCAGGAT ATCGGAGAGGGTGAGGTACGTATGGCAGCTCTGTCCACTTGAAGCGAGAG TGCATGAGGATCCACGTACCCTTCACTCGTTGGTCATTCCGAGGGCAACA AGACTTTCCCTCTCCCCACCTGCTTCCCAGGTTATGCTCGAGGTTTCTTC GGAGTTATGTTTGTGGTCAACTCGAGACGGAGTCATCAGCGTGAGTCCAA TCCTAGAGGGTGCTCCGTCATGGCGTTCAACAGCCCACCAATGAGCAGAG TTGCGTGAAAGCTTCGCCCGTGTTGGGAGTGAGACCTATATTAACCTTGC AAGACCGCACCCATTTTTCCACGCTTCCTTCCCATGATCCTAACCACCGC TGCTCCTCAGGGGCTGTACGGTCAGACGGAAATGTGCTGGGAAGCAGCCG GTGACTTGCGCGAACCGGTCTCGGACAACGATTTCTTGAGAGGCATGACT TGGGACGTGAGACTAGCAGTGGCTCTCCTTGAGGCCACGGCGGATCCCCA AGTTGGTGGGCAGTTCTGGGATCTCTACAGCCGTCTCCTCCCTGATCCGC ACACTGTGTCTGTGAGTGTGCACGGTATATGGTACCAGCATGTACAGTGG AGCTACAAGTAGTGGAAATGGTTTCTTACCAAGTACCTGGTAGAGGACTG TTTCACTTCACACTGCTTGAAGAATTCATCTGAATTTTTTATGTACGTCG TGCTTCAGGGCACCGCGAGTTCATTTCAGGCAGCTGTACACCCCAAAATG CTGTCTCCCTTTGCCACGGCCGACCAACCCCCTGTCCAAACGTACTATGA CCTCCGCCCAGTGTCGACTGATTGGTGATCAATTGATCCTTTCCCCCCCC TCCTGCCTTGTCCGTCCCCTGTGCCCCTGTGTGTTCGTGTTCGTGTTCGT GTTCGTGTTCATCGCTTTTTCCCTATTATACCAGGTCCCCTTCTGCCTGC CGGAGAGGCTCCTCGCCCAGCTGCACAACAAGGGCATGGCTGAGGGGGCA AGGAGGCAGAAGGAACGACTGACACGCCTCTACCCGGCCCTTATGCAAAC CCTCCTCTCCCACCGGATCACCGCCCCGTACAGCGGCATTAGCACCACGG TCGGCGCCTCGGGGGGGGGGCAGGAGGGCCCTGGCAGAGACAGGGGGGGC AGGGCAGTGGGGGGGGGGGTGGACCCGGGGATTCCCATGGCCCTTACGTG GGCATTTGCCATGGTCCGAAGCCGGGCATTTGGCGCTGGAGAGGAGAGGT TCGCGCTGGTTCCTTTCCTGGTGAGGTTTTCGTTTTCGCGGGGGGGAAGG GGGGGGGCAGGGTCCCGGTCTTTTCTCGTCCTGTTCCATCCATTTTTTTT TGGCCGTGTGTGTGGTTGGTCCATCTGAGGAGTAGCATACAAGCTGCTCC CGGCGGGCATGAATCTTGGGGCTTGACATCCTCCGTGCGGGGGAAGGGCA CGAAGGGACTCCAGAGGAGGGCAACCTGCAGGCCAGCAAAAGAGACAAAG GTTGACAAGAATGCAGGTAAAACCACACATACGTACGTACAGGCATTGAC TGTGCCAGTTTGTTGCAGGGGGGAGGAAAGCCATGTAGCCGTTTTCCCCG AACCTGGCATGTCTCAATGTCTCCGTCCCTCACACACACACACACACCCG CCCCCCCGCCCCCCCCGTGTTGGTGTTATTGACCAGGACATGGCCAACCA CGAGTTCAACCCTAGTGCAAACTTCACCTTCGAGGCCCCAGGAGTCTTCC GGATGCGAGCCCTGCGTGACATTTCTTCAGGAGAGGAGGTG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10392:14..2104-

>mRNA_D-mesarthrocarpus_Contig10392.1.2 ID=mRNA_D-mesarthrocarpus_Contig10392.1.2|Name=mRNA_D-mesarthrocarpus_Contig10392.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1005bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10392:14..2104- (Discosporangium mesarthrocarpum MT17_79)
ATGGCCCCTCGGGGTAGATCTCTGGTTATCAGCGGCCTCGTCTCTGTCCT
AATCAGCTCTCCTCATTGTCAAGGATTTGTATCTGTGGTGCGCACATTGC
CGATGACTCAGCGAGGTGTAGCGGAGCGCTGGTGTTTGAGAGGCACACCA
GGGGACAATGACAGGATAGCTGCTCGGGACAGGGTTACACAGGAAAGCGA
GCTGTTTGAATGGATGTCGAAAAATTTTGGGGTTGAAAAAAAGGTTTCTC
TACGGGGAGAGAGGAGGGGCCTTTTCGTCGAGCAGGATATCGGAGAGGGT
GAGGTTATGCTCGAGGTTTCTTCGGAGTTATGTTTGTGGTCAACTCGAGA
CGGAGTCATCAGCGGGCTGTACGGTCAGACGGAAATGTGCTGGGAAGCAG
CCGGTGACTTGCGCGAACCGGTCTCGGACAACGATTTCTTGAGAGGCATG
ACTTGGGACGTGAGACTAGCAGTGGCTCTCCTTGAGGCCACGGCGGATCC
CCAAGTTGGTGGGCAGTTCTGGGATCTCTACAGCCGTCTCCTCCCTGATC
CGCACACTGTGTCTGTCCCCTTCTGCCTGCCGGAGAGGCTCCTCGCCCAG
CTGCACAACAAGGGCATGGCTGAGGGGGCAAGGAGGCAGAAGGAACGACT
GACACGCCTCTACCCGGCCCTTATGCAAACCCTCCTCTCCCACCGGATCA
CCGCCCCGTACAGCGGCATTAGCACCACGGTCGGCGCCTCGGGGGGGGGG
CAGGAGGGCCCTGGCAGAGACAGGGGGGGCAGGGCAGTGGGGGGGGGGGT
GGACCCGGGGATTCCCATGGCCCTTACGTGGGCATTTGCCATGGTCCGAA
GCCGGGCATTTGGCGCTGGAGAGGAGAGGTTCGCGCTGGTTCCTTTCCTG
GACATGGCCAACCACGAGTTCAACCCTAGTGCAAACTTCACCTTCGAGGC
CCCAGGAGTCTTCCGGATGCGAGCCCTGCGTGACATTTCTTCAGGAGAGG
AGGTG
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